Query FBpp0290329 type=protein; loc=3L:join(7019749..7019898,7034972..7035038,7035170..7035315,7035744..7035881,7038005..7038151,7041018..7041131,7043466..7043720,7044926..7045003,7045109..7045355,7046334..7046488,7046586..7046678,7048842..7048964,7049550..7049576,7050565..7050695,7051242..7051421,7051486..7051722,7051977..7052052); ID=FBpp0290329; name=Mp-PF; parent=FBgn0260660,FBtr0301107; dbxref=REFSEQ:NP_001163357,GB_protein:ACZ94628,FlyBase:FBpp0290329,FlyBase_Annotation_IDs:CG42543-PF,FlyMine:FBpp0290329,modMine:FBpp0290329; MD5=0f04423f6d49df9e517757cc4a7d0be7; length=787; release=r6.06; species=Dmel; Match_columns 787 No_of_seqs 699 out of 2636 Neff 6.1 Searched_HMMs 35384 No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 1dy2_A Collagen alpha1(XV) cha 100.0 1.6E-63 4.5E-68 485.7 13.3 172 576-751 5-177 (180) 2 1koe_A Endostatin; angiogenesi 100.0 4.1E-63 1.2E-67 486.9 12.4 169 579-747 2-171 (172) 3 3hqv_A Collagen alpha-1(I) cha 100.0 5.9E-30 1.7E-34 312.3 41.3 31 424-454 998-1028(1056) 4 3n3f_A Collagen alpha-1(XV) ch 99.4 3.2E-13 9E-18 108.3 5.3 51 488-538 3-53 (54) 5 3hsh_A Endostatin, collagen al 99.4 2.5E-13 6.9E-18 109.6 4.3 52 487-538 4-55 (56) 6 1o91_A Collagen alpha 1(VIII) 96.8 9.8E-05 2.8E-09 73.9 -3.0 67 452-525 83-155 (178) 7 4dou_A Adiponectin; single-cha 91.4 0.031 8.8E-07 63.5 -1.2 78 436-525 190-273 (442) 8 2wnv_C C1Q chain C, complement 90.8 0.038 1.1E-06 52.2 -1.0 75 438-524 31-109 (131) 9 4ous_A Caprin-2; C1Q domain, W 90.4 0.062 1.8E-06 51.6 0.1 67 452-525 41-115 (143) 10 1gr3_A Collagen X; extracellul 90.1 0.036 1E-06 54.4 -2.0 77 437-525 55-137 (160) 11 4qqh_A Complement C1Q-like pro 89.9 0.038 1.1E-06 52.6 -1.9 67 452-525 41-116 (137) 12 2wnv_B C1Q chain B, complement 88.1 0.069 1.9E-06 50.8 -1.5 74 439-524 31-111 (136) 13 4f3j_A Complement C1Q tumor ne 87.7 0.064 1.8E-06 51.9 -2.1 75 438-524 29-110 (148) 14 2wnv_A C1Q chain A, complement 86.5 0.082 2.3E-06 50.1 -2.0 68 452-526 36-112 (134) 15 1ei8_A Collagen-like peptide ( 84.6 1.6 4.6E-05 30.6 4.4 6 82-87 6-11 (29) 16 1pwb_A SP-D, PSP-D, pulmonary 76.7 0.62 1.7E-05 44.8 0.0 12 732-743 164-175 (177) 17 2ka3_A Emilin-1; C1Q-like doma 75.7 0.85 2.4E-05 44.7 0.7 78 436-525 38-136 (162) 18 1rj8_A Ectodysplasin-A isoform 75.4 0.58 1.6E-05 45.7 -0.6 68 452-526 64-141 (164) 19 4dou_A Adiponectin; single-cha 74.7 0.48 1.4E-05 53.8 -1.5 76 437-524 50-131 (442) 20 1pwb_A SP-D, PSP-D, pulmonary 73.0 0.87 2.4E-05 43.8 0.0 7 688-694 112-118 (177) 21 2dpr_A Conantokin-T, CON-T; co 67.1 2.8 7.8E-05 26.4 1.3 12 775-786 2-13 (21) 22 1o91_A Collagen alpha 1(VIII) 36.2 9.1 0.00026 37.9 0.0 55 646-706 70-125 (178) 23 1buu_A Protein (mannose-bindin 29.7 13 0.00038 35.5 0.0 12 732-743 153-164 (168) 24 2ljw_A ALR2454 protein; novel 21.9 44 0.0013 30.7 1.8 14 773-786 45-58 (110)No 1>1dy2_A Collagen alpha1(XV) chain; angiogenesis inhibitor; 2.0A {Mus musculus} SCOP: d.169.1.5 Probab=100.00 E-value=1.6e-63 Score=485.66 Aligned_cols=172 Identities=52% Similarity=0.963 Sum_probs=164.0 Q ss_pred ccccceEEEEeCCCCCCCCCccchhhHHHHHHHhhcCCCCceeEEeeccccCcccccCCCCC-CCccccCCCcEEeCCcc Q FBpp0290329 576 PEYETLRVAALNEPSTGDLQGIRGADFACYRQGRRAGLLGTFKAFLSSRVQNLDTIVRPADR-DLPVVNTRGDVLFNSWK 654 (787) Q Consensus 576 ~~~~~l~~~a~~~~~~G~lgGi~GAD~~C~~~A~~~g~~gt~rA~Ls~~~~~~~~~V~~~dr-~~p~vn~~g~vl~~~~~ 654 (787) .+.++|||||||+|++|||+ ||++||+|||++|++||||||||+++||+++||+++|| ++||||+||+|||+||+ T Consensus 5 ~~~~~L~lvALN~P~sG~m~----AD~~C~~qAraaGl~gTfRAfLSs~~qdl~~iV~~~DR~~~PivNlkGevLf~sw~ 80 (180) T 1dy2_A 5 YERPVLHLVALNTPVAGDIR----ADFQCFQQARAAGLLSTFRAFLSSHLQDLSTVVRKAERFGLPIVNLKGQVLFNNWD 80 (180) T ss_dssp --CCCEEEEECSSCBCSBCC----HHHHHHHHHHHTTCCSCEEESSCBTTBCGGGSSCGGGSSSCCEECTTSCEEESCSG T ss_pred CCCccEEEEEcCCCCCCCch----HHHHHHHHHHHhCCCCceEEEeecccccCccccCHhHcCCCCeEcCCCCEEecCHH Confidence 35679999999999999999 99999999999999999999999999999999999999 79999999999999999 Q ss_pred ccccCCCCcccCCCceeecCCCccCCCCCCCcceEEeeCCCCcccccCccCCccccCCCCceeecccCCccccccccccc Q FBpp0290329 655 GIFNGQGGFFSQAPRIYSFSGKNVMTDSTWPMKMVWHGSLPNGERSMDTYCDAWHSGDHLKGSFASNLDGHKLLEQKRQS 734 (787) Q Consensus 655 ~l~~~~~~~~~~~~~i~~f~~~~~l~d~~~p~~~vW~Gs~~~g~~~~~~~C~~W~s~~~~~~G~as~~~~~~l~~~~~~~ 734 (787) +||++++++|+.+.+||+||+||||+|++||||.|||||++||++.+++||++|||++.+++|+||+|++++||.|+.+| T Consensus 81 ~lf~g~~~~l~~~~~Iysfdg~dVl~d~~wP~K~vWhGS~~~G~r~~d~~C~~W~s~~~~~~G~Assl~~g~ll~q~~~s 160 (180) T 1dy2_A 81 SIFSGDGGQFNTHIPIYSFDGRDVMTDPSWPQKVVWHGSNPHGVRLVDKYCEAWRTTDMAVTGFASPLSTGKILDQKAYS 160 (180) T ss_dssp GGGSSSCCBCCTTSCCBBTTSCBTTTCTTCSSCEEECCBCTTSCBCTTSBHHHHBCCCTTCEEEEEEGGGTBSSCCEEEE T ss_pred HHhCCCCCccCCCCCeeccCCcccccCCCccccccccCCCCCCCCcccccccCCccCCCCceEeeeecCCCCcccCcccC Confidence 99999988999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred cccCceEEEEecccHHH Q FBpp0290329 735 CDSKLIILCVEALSQDR 751 (787) Q Consensus 735 C~~~~~vlCvE~~~~~~ 751 (787) |+++||||||||+.... T Consensus 161 C~~~~ivLCIEn~~~~~ 177 (180) T 1dy2_A 161 CANRLIVLCIENSFMTD 177 (180) T ss_dssp TTSCBBCEEEECCC--- T ss_pred CCCceEEEEEEcccccc Confidence 99999999999987544No 2>1koe_A Endostatin; angiogenesis inhibitor, collagen XVIII, non-collageneous domain, heparin-binding domain; 1.50A {Mus musculus} SCOP: d.169.1.5 PDB: 1dy0_A 1dy1_A 1bnl_A Probab=100.00 E-value=4.1e-63 Score=486.89 Aligned_cols=169 Identities=47% Similarity=0.910 Sum_probs=165.8 Q ss_pred cceEEEEeCCCCCCCCCccchhhHHHHHHHhhcCCCCceeEEeeccccCcccccCCCCC-CCccccCCCcEEeCCccccc Q FBpp0290329 579 ETLRVAALNEPSTGDLQGIRGADFACYRQGRRAGLLGTFKAFLSSRVQNLDTIVRPADR-DLPVVNTRGDVLFNSWKGIF 657 (787) Q Consensus 579 ~~l~~~a~~~~~~G~lgGi~GAD~~C~~~A~~~g~~gt~rA~Ls~~~~~~~~~V~~~dr-~~p~vn~~g~vl~~~~~~l~ 657 (787) ++|||||||++|+|||+||+|||++||+||+++|++||||||||+++|++++||+++|| ++||||+||||||+||+||| T Consensus 2 ~~l~lvaln~p~~GnlgGi~GAD~~C~~~A~aaGl~gtfRAfLSs~~q~~~~iV~~~dr~~~P~vN~kg~vl~~~~~~l~ 81 (172) T 1koe_A 2 PVLHLVALNTPLSGGMRGIRGADFQCFQQARAVGLSGTFRAFLSSRLQDLYSIVRRADRGSVPIVNLKDEVLSPSWDSLF 81 (172) T ss_dssp CCEEEEECSSCBCSCSSHHHHHHHHHHHHHHHTTCCSCEEESCCBTTBCGGGGSCGGGTTTCCEECTTCCEEESCHHHHT T ss_pred CceEEEEeCCCcCCCcccchhHHHHHHHHHHhcCCCCeeEEEEEcccCCccceeccccccCCCeECCcCcEEeCCHHHhc Confidence 58999999999999999999999999999999999999999999999999999999999 79999999999999999999 Q ss_pred cCCCCcccCCCceeecCCCccCCCCCCCcceEEeeCCCCcccccCccCCccccCCCCceeecccCCcccccccccccccc Q FBpp0290329 658 NGQGGFFSQAPRIYSFSGKNVMTDSTWPMKMVWHGSLPNGERSMDTYCDAWHSGDHLKGSFASNLDGHKLLEQKRQSCDS 737 (787) Q Consensus 658 ~~~~~~~~~~~~i~~f~~~~~l~d~~~p~~~vW~Gs~~~g~~~~~~~C~~W~s~~~~~~G~as~~~~~~l~~~~~~~C~~ 737 (787) ++++++|+++..||+||+||||+|++||+|+|||||++||+|..++||++|||++.+++|+||+|++++||+|+.++|++ T Consensus 82 ~~~~~~~~~~~~i~sfn~~dvl~d~~wp~k~vWtGs~~~G~~~~~~~C~~Wts~~~~~~G~assl~~~~ll~q~~~sCs~ 161 (172) T 1koe_A 82 SGSQGQLQPGARIFSFDGRDVLRHPAWPQKSVWHGSDPSGRRLMESYCETWRTETTGATGQASSLLSGRLLEQKAASCHN 161 (172) T ss_dssp SSSCSBCCTTCCCBBTTSCBTTTCTTSSSCEEECCBCTTSCBCTTSBHHHHTCCCTTCEEEEEEGGGTBSCCCEEEETTS T ss_pred CCCCccccCCCceEccCCCccccCCCCccceeEECCCCCCcCcCCCcccCCcCCCCCceEeeccCCCCCcccCcCCCcCC Confidence 99998999999999999999999999999999999999999988999999999999999999999999999999999999 Q ss_pred CceEEEEecc Q FBpp0290329 738 KLIILCVEAL 747 (787) Q Consensus 738 ~~~vlCvE~~ 747 (787) +|+||||||+ T Consensus 162 ~~~vLCIE~~ 171 (172) T 1koe_A 162 SYIVLCIENS 171 (172) T ss_dssp CBBCEEEECC T ss_pred CcEEEEEeec Confidence 9999999996No 3>3hqv_A Collagen alpha-1(I) chain; native, in SITU, molecular envelope, triple-helical, supermolecular, supramolecular, packing structure; 5.16A {Rattus norvegicus} SCOP: i.25.1.1 PDB: 3hr2_A Probab=99.98 E-value=5.9e-30 Score=312.34 Aligned_cols=31 Identities=45% Similarity=0.787 Sum_probs=12.1 Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC Q FBpp0290329 424 GPKGEPGVDSRSSFFGDASYYGRPEPPRQPG 454 (787) Q Consensus 424 G~~G~~G~~g~~~~~G~~g~~G~pgppg~~G 454 (787) ++.|++|..+.++..+..+..+.+++++.++ T Consensus 998 G~~G~~G~~G~~G~~G~~G~~G~pGppGpPG 1028 (1056) T 3hqv_A 998 GPIGPPGPRGRTGDSGPAGPPGPPGPPGPPG 1028 (1056) T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC Confidence 3333333333333333333344444444443No 4>3n3f_A Collagen alpha-1(XV) chain; extracellular matrix, basement membrane, collagen trimerization domain, folding, association, chain selection helix; 2.00A {Homo sapiens} Probab=99.39 E-value=3.2e-13 Score=108.29 Aligned_cols=51 Identities=35% Similarity=0.785 Sum_probs=48.8 Q ss_pred ceeeehHHHHhhccCCCCCCceEEecCCceEEEEEcCCceeeecCccccCC Q FBpp0290329 488 AVTFQNIDEMTKKSALNPPGTLAYITEEEALLVRVNKGWQYIALGTLVPIA 538 (787) Q Consensus 488 ~~~~~t~d~m~~~s~~sseGtl~yl~~~~el~vrv~~Gw~~I~lg~~~p~~ 538 (787) +++|+|+++|+++++..++|+|+|+++++||||||++|||+|+|++++|++ T Consensus 3 v~~~~t~~~M~~~~~~~~eGtL~yv~d~~eLyiRVr~Gwr~V~Lg~~ip~p 53 (54) T 3n3f_A 3 VTAFSNMDDMLQKAHLVIEGTFIYLRDSTEFFIRVRDGWKKLQLGELIPIP 53 (54) T ss_dssp EEEESSHHHHHTTGGGSCTTEEEEETTTTEEEEEETTEEEECCCCCCCCCC T ss_pred cEEEecHHHHHhhCccCCCeEEEEEEecceEEEEEcCceeeeeecccccCC Confidence 578999999999999999999999999999999999999999999999874No 5>3hsh_A Endostatin, collagen alpha-1(XVIII) chain; extracellular matrix, basement membrane, collagen trimerization domain, folding, association; 1.80A {Homo sapiens} PDB: 3hon_A Probab=99.38 E-value=2.5e-13 Score=109.64 Aligned_cols=52 Identities=27% Similarity=0.484 Sum_probs=49.9 Q ss_pred CceeeehHHHHhhccCCCCCCceEEecCCceEEEEEcCCceeeecCccccCC Q FBpp0290329 487 GAVTFQNIDEMTKKSALNPPGTLAYITEEEALLVRVNKGWQYIALGTLVPIA 538 (787) Q Consensus 487 ~~~~~~t~d~m~~~s~~sseGtl~yl~~~~el~vrv~~Gw~~I~lg~~~p~~ 538 (787) ++++|+|+++|++.++..++|+|+|+++++||||||++|||+|+|+.++|++ T Consensus 4 gv~~~~t~~~ml~~~~~~~eGtL~yv~d~~eLyiRVr~Gwr~V~Lg~~~pip 55 (56) T 3hsh_A 4 GVRLWATRQAMLGQVHEVPEGWLIFVAEQEELYVRVQNGFRKVQLEARTPLP 55 (56) T ss_dssp CEEEESSHHHHHHHGGGSCTTCEEEETTTTEEEEEETTEEEEECEEEEEECC T ss_pred cEEEEecHHHHHhhCccCCCeEEEEEEecceEEEEEcCcEEEEeecccccCC Confidence 4789999999999999999999999999999999999999999999999986No 6>1o91_A Collagen alpha 1(VIII) chain; C1Q_LIKE_domain, extracellular matrix, adhesion, connective tissue, repeat, structural protein; HET: CPS; 1.9A {Mus musculus} SCOP: b.22.1.1 Probab=96.77 E-value=9.8e-05 Score=73.85 Aligned_cols=67 Identities=12% Similarity=0.138 Sum_probs=48.7 Q ss_pred CCCCCCCCccccCcCCCCCCccccC----CCCCceeeecC-ceeeehHHHHhhcc-CCCCCCceEEecCCceEEEEEcCC Q FBpp0290329 452 QPGHSHKHEETLGLVDGEEPYFSAS----SSNMNMKIVPG-AVTFQNIDEMTKKS-ALNPPGTLAYITEEEALLVRVNKG 525 (787) Q Consensus 452 ~~G~~~~~ep~~~~~~~~~P~~s~s----~~~~~v~iv~~-~~~~~t~d~m~~~s-~~sseGtl~yl~~~~el~vrv~~G 525 (787) .+|.|+|..+ +.|+|+.. ..++++.|++| ..+..++++..+.. +..+..++++|...|+||||+..+ T Consensus 83 ~TG~FTapv~-------G~Y~Fs~~~~~~~~~~~v~L~~Ng~~~~~~~~~~~~~~~~~~S~s~vL~L~~GD~V~l~l~~~ 155 (178) T 1o91_A 83 QTGIFTCEVP-------GVYYFAYHVHCKGGNVWVALFKNNEPMMYTYDEYKKGFLDQASGSAVLLLRPGDQVFLQMPSE 155 (178) T ss_dssp TTTEEECCSC-------EEEEEEEEEEEEEEEEEEEEEETTEEEEEEEECCBTTBCEEEEEEEEEEECTTCEEEEECCCG T ss_pred CCCeEEeeCC-------eEEEEEEEEEeCCceEEEEEEECCEEEEEEEecCCCCcceEEeeEEEEEeCCCCEEEEEEecC Confidence 5788887655 77888853 24678888888 55555555443332 467889999999999999999764No 7>4dou_A Adiponectin; single-chain globular domain, calcium binding, C1Q-like DOMA growth factor, serum, hormone; 2.00A {Homo sapiens} SCOP: b.22.1.0 b.22.1.0 b.22.1.0 PDB: 1c3h_A 1c28_A Probab=91.44 E-value=0.031 Score=63.53 Aligned_cols=78 Identities=12% Similarity=0.207 Sum_probs=58.8 Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCccccCcCCCCCCccccC----CCCCceeeecC-ceeeehHHHHhhcc-CCCCCCce Q FBpp0290329 436 SFFGDASYYGRPEPPRQPGHSHKHEETLGLVDGEEPYFSAS----SSNMNMKIVPG-AVTFQNIDEMTKKS-ALNPPGTL 509 (787) Q Consensus 436 ~~~G~~g~~G~pgppg~~G~~~~~ep~~~~~~~~~P~~s~s----~~~~~v~iv~~-~~~~~t~d~m~~~s-~~sseGtl 509 (787) .+.+..++|.. .+|+|+|..+ ++|||+.. ..++++.||+| ..+..++++..+.. ++++.++| T Consensus 190 v~~N~g~~yd~-----~tG~Ftc~v~-------G~Y~Fs~~~~~~~~~~~v~L~~Ng~~~~~~~~~~~~~~~~~~S~s~v 257 (442) T 4dou_A 190 IFYNQQNHYDG-----STGKFHCNIP-------GLYYFAYHITVYMKDVKVSLFKKDKAMLFTYDQYQENNVDQASGSVL 257 (442) T ss_dssp EEECTTCCEET-----TTTEEECCSC-------EEEEEEEEEEEEEEEEEEEEEETTEEEEEEEECCBTTBCEEEEEEEE T ss_pred EEECCCCCcCC-----CCCeEecccc-------eEEEEEEEEEecCCcEEEEEEECCceEEEEEeccCCCcccccceeEE Confidence 34455566654 6899999776 78998852 45789999998 55666676654433 57899999 Q ss_pred EEecCCceEEEEEcCC Q FBpp0290329 510 AYITEEEALLVRVNKG 525 (787) Q Consensus 510 ~yl~~~~el~vrv~~G 525 (787) +.|..+|+||||+.++ T Consensus 258 L~L~~GD~Vwl~~~~~ 273 (442) T 4dou_A 258 LHLEVGDQVWLQVYGE 273 (442) T ss_dssp EEECTTCEEEEEECSS T ss_pred EEecCCCEEEEEEecc Confidence 9999999999999765No 8>2wnv_C C1Q chain C, complement C1Q subcomponent subunit C; immune system, secreted, collagen, recognition, disulfide bond, innate immunity; HET: NAG; 1.25A {Homo sapiens} SCOP: b.22.1.1 PDB: 2jg8_C 2wnu_C* 2jg9_C* 1pk6_C Probab=90.84 E-value=0.038 Score=52.21 Aligned_cols=75 Identities=17% Similarity=0.226 Sum_probs=51.4 Q ss_pred CCCCCCCCCCCCCCCCCCCCCCccccCcCCCCCCcccc---CCCCCceeeecCceeeehH-HHHhhccCCCCCCceEEec Q FBpp0290329 438 FGDASYYGRPEPPRQPGHSHKHEETLGLVDGEEPYFSA---SSSNMNMKIVPGAVTFQNI-DEMTKKSALNPPGTLAYIT 513 (787) Q Consensus 438 ~G~~g~~G~pgppg~~G~~~~~ep~~~~~~~~~P~~s~---s~~~~~v~iv~~~~~~~t~-d~m~~~s~~sseGtl~yl~ 513 (787) .+..++|.. .+|.|+|..+ +.|+|+. ...++++.|++|-..+... +......+..+..++++|. T Consensus 31 ~N~g~~yn~-----~tG~Ftap~~-------G~Y~Fs~~~~~~~~~~v~L~~Ng~~~~~~~~~~~~~~~~~S~s~vL~L~ 98 (131) T 2wnv_C 31 TNPQGDYDT-----STGKFTCKVP-------GLYYFVYHASHTANLCVLLYRSGVKVVTFCGHTSKTNQVNSGGVLLRLQ 98 (131) T ss_dssp ECTTCCEET-----TTTEEECSSC-------EEEEEEEEEEESSCEEEEEEETTEEEEEEEECCSSSCEEEEEEEEEEEC T ss_pred ECCCCCccc-----CCCEEEcCCC-------eEEEEEEEEEeCCEEEEEEEECCEEEEEEEecCCCCcceEeeEEEEEEC Confidence 344455553 5788888666 7788885 3457788899883333332 2222223577889999999 Q ss_pred CCceEEEEEcC Q FBpp0290329 514 EEEALLVRVNK 524 (787) Q Consensus 514 ~~~el~vrv~~ 524 (787) .+|+||||+.. T Consensus 99 ~GD~V~v~~~~ 109 (131) T 2wnv_C 99 VGEEVWLAVND 109 (131) T ss_dssp TTCEEEEEEEE T ss_pred CCCEEEEEEcC Confidence 99999999963No 9>4ous_A Caprin-2; C1Q domain, WNT signaling, signaling protein; 1.05A {Danio rerio} SCOP: b.22.1.0 PDB: 4oul_A 4oum_A* Probab=90.44 E-value=0.062 Score=51.59 Aligned_cols=67 Identities=9% Similarity=0.123 Sum_probs=47.0 Q ss_pred CCCCCCCCccccCcCCCCCCccccC------CCCCceeeecCc-eeeehHHHHh-hccCCCCCCceEEecCCceEEEEEc Q FBpp0290329 452 QPGHSHKHEETLGLVDGEEPYFSAS------SSNMNMKIVPGA-VTFQNIDEMT-KKSALNPPGTLAYITEEEALLVRVN 523 (787) Q Consensus 452 ~~G~~~~~ep~~~~~~~~~P~~s~s------~~~~~v~iv~~~-~~~~t~d~m~-~~s~~sseGtl~yl~~~~el~vrv~ 523 (787) .+|.|+|..+ +.|+|+.. ...+++.|++|. .+...++... ...+..+..++++|..+|+||||+. T Consensus 41 ~TG~Ftapv~-------G~Y~Fs~~~~~~~~~~~~~v~L~~Ng~~~~~~~~~~~~~~~~~~S~s~vL~L~~GD~V~v~~~ 113 (143) T 4ous_A 41 GSGRFTCPAT-------GAYVFIFHILKLAISVPLYINLMRNEEVMVSAYANDGAPDHETASNHAVLQLFQGDQVWLRLH 113 (143) T ss_dssp TTTEEECSSS-------EEEEEEEEEEBCSSSSCEEEEEEETTEEEEEEEECCSSCCCCEEEEEEEEEECTTCEEEEEEE T ss_pred cCCEEECCCC-------EEEEEEEEEEeeCCCcEEEEEEEECCEEEEEEEecCCCCCccEEeeeEEEEECCCCEEEEEEC Confidence 5788888666 77888842 235678888883 3333333221 1235678899999999999999998 Q ss_pred CC Q FBpp0290329 524 KG 525 (787) Q Consensus 524 ~G 525 (787) +| T Consensus 114 ~g 115 (143) T 4ous_A 114 RG 115 (143) T ss_dssp ES T ss_pred CC Confidence 65No 10>1gr3_A Collagen X; extracellular matrix, connective tissue; HET: CPS; 2.0A {Homo sapiens} SCOP: b.22.1.1 Probab=90.10 E-value=0.036 Score=54.38 Aligned_cols=77 Identities=14% Similarity=0.202 Sum_probs=54.5 Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCccccCcCCCCCCccccC----CCCCceeeecC-ceeeehHHHHhhcc-CCCCCCceE Q FBpp0290329 437 FFGDASYYGRPEPPRQPGHSHKHEETLGLVDGEEPYFSAS----SSNMNMKIVPG-AVTFQNIDEMTKKS-ALNPPGTLA 510 (787) Q Consensus 437 ~~G~~g~~G~pgppg~~G~~~~~ep~~~~~~~~~P~~s~s----~~~~~v~iv~~-~~~~~t~d~m~~~s-~~sseGtl~ 510 (787) +.+..++|.. .+|.|+|..+ +.|+|+.. ..++++.|++| ..+...+++..+.. ++.+..+++ T Consensus 55 ~~N~G~~yn~-----~TG~FTapv~-------G~Y~Fsf~~~~~~~~~~v~L~~Ng~~v~~~~~~~~~~~~~~~S~s~vL 122 (160) T 1gr3_A 55 LYNRQQHYDP-----RTGIFTCQIP-------GIYYFSYHVHVKGTHVWVGLYKNGTPVMYTYDEYTKGYLDQASGSAII 122 (160) T ss_dssp EECTTCCEET-----TTTEEECSSC-------EEEEEEEEEEEEEEEEEEEEEETTEEEEEEEECCBTTBCEEEEEEEEE T ss_pred EECCCCcccC-----cCCEEEeccC-------CEEEEEEEEEeCCCcEEEEEEECCEEEEEEEecCCCCceeEEeeeEEE Confidence 3455556654 5888888666 78898853 23567888988 44555555443333 457889999 Q ss_pred EecCCceEEEEEcCC Q FBpp0290329 511 YITEEEALLVRVNKG 525 (787) Q Consensus 511 yl~~~~el~vrv~~G 525 (787) +|...|+||||+..+ T Consensus 123 ~L~~GD~V~l~l~~~ 137 (160) T 1gr3_A 123 DLTENDQVWLQLPNA 137 (160) T ss_dssp EECTTCEEEEECCCT T ss_pred EECCCCEEEEEEecC Confidence 999999999999754No 11>4qqh_A Complement C1Q-like protein 3; jelly roll fold, brain-specific angiogenesis inhibitor coupled receptor 3, extracellular, protein binding; 1.20A {Mus musculus} PDB: 4qqp_A 4qq2_A 4d7y_A 4qpy_A Probab=89.89 E-value=0.038 Score=52.59 Aligned_cols=67 Identities=9% Similarity=0.155 Sum_probs=46.2 Q ss_pred CCCCCCCCccccCcCCCCCCccccC----C---CCCceeeecC-ceeeehHHHH-hhccCCCCCCceEEecCCceEEEEE Q FBpp0290329 452 QPGHSHKHEETLGLVDGEEPYFSAS----S---SNMNMKIVPG-AVTFQNIDEM-TKKSALNPPGTLAYITEEEALLVRV 522 (787) Q Consensus 452 ~~G~~~~~ep~~~~~~~~~P~~s~s----~---~~~~v~iv~~-~~~~~t~d~m-~~~s~~sseGtl~yl~~~~el~vrv 522 (787) .+|.|+|..+ +.|+|+.. . ..+++.|++| ..+...+++. ....+.++..++++|..+|+||||+ T Consensus 41 ~TG~Ftap~~-------G~Y~Fs~~~~~~~~~~~~~~v~L~~Ng~~~~~~~~~~~~~~~~~~S~s~vL~L~~GD~V~l~~ 113 (137) T 4qqh_A 41 TTGKFTCSIP-------GIYFFTYHVLMRGGDGTSMWADLCKNNQVRASAIAQDADQNYDYASNSVVLHLEPGDEVYIKL 113 (137) T ss_dssp TTTEEECCSC-------EEEEEEEEEEBCSSSCSEEEEEEEETTEEEEEEEEECTTCCCCEEEEEEEEEECTTCEEEEEE T ss_pred CCCEEECCCC-------eEEEEEEEEEEecCCCCEEEEEEEECCEEEEEEEEeCCCCcccEecceEEEEeCCCCEEEEEE Confidence 5788888666 77888842 1 2567888888 3333333322 2223567889999999999999999 Q ss_pred cCC Q FBpp0290329 523 NKG 525 (787) Q Consensus 523 ~~G 525 (787) ..+ T Consensus 114 ~~g 116 (137) T 4qqh_A 114 DGG 116 (137) T ss_dssp EEE T ss_pred cCC Confidence 753No 12>2wnv_B C1Q chain B, complement C1Q subcomponent subunit B; immune system, secreted, collagen, recognition, disulfide bond, innate immunity; HET: NAG; 1.25A {Homo sapiens} SCOP: b.22.1.1 PDB: 2jg8_B 2wnu_B* 2jg9_B* 1pk6_B Probab=88.10 E-value=0.069 Score=50.77 Aligned_cols=74 Identities=12% Similarity=0.203 Sum_probs=49.9 Q ss_pred CCCCCCCCCCCCCCCCCCCCCccccCcCCCCCCcccc---CCCCCceeeecCcee---eehHHHHhhc-cCCCCCCceEE Q FBpp0290329 439 GDASYYGRPEPPRQPGHSHKHEETLGLVDGEEPYFSA---SSSNMNMKIVPGAVT---FQNIDEMTKK-SALNPPGTLAY 511 (787) Q Consensus 439 G~~g~~G~pgppg~~G~~~~~ep~~~~~~~~~P~~s~---s~~~~~v~iv~~~~~---~~t~d~m~~~-s~~sseGtl~y 511 (787) +..++|.. .+|.|+|..+ +.|+|+. ...++++.|++|-.. ..++++..+. .+.++..++++ T Consensus 31 N~g~~yn~-----~TG~Ftap~~-------G~Y~Fs~~~~~~~~~~v~L~~Ng~~i~~~~~~~~~~~~~~~~~S~s~vL~ 98 (136) T 2wnv_B 31 NMNNNYEP-----RSGKFTCKVP-------GLYYFTYHASSRGNLCVNLMRGRERAQKVVTFCDYAYNTFQVTTGGMVLK 98 (136) T ss_dssp EETSCEET-----TTTEEECSSC-------EEEEEEEEEEESSCEEEEEEEESSSCEEEEEEEECCSSSCEEEEEEEEEE T ss_pred CCCCCccC-----CCCEEECCCC-------CEEEEEEEEEeCCeEEEEEEECCEEeEEEEEEeecCCCcccccceeEEEE Confidence 33455553 5888888666 7889885 245678888887322 3333332222 24567889999 Q ss_pred ecCCceEEEEEcC Q FBpp0290329 512 ITEEEALLVRVNK 524 (787) Q Consensus 512 l~~~~el~vrv~~ 524 (787) |..+|+||||+.. T Consensus 99 L~~GD~V~v~~~~ 111 (136) T 2wnv_B 99 LEQGENVFLQATD 111 (136) T ss_dssp ECTTCEEEEEEEE T ss_pred ECCCCEEEEEEeC Confidence 9999999999973No 13>4f3j_A Complement C1Q tumor necrosis factor-related PROT; late-onset retinal macular degeneration, L-ORMD, L-ORD, AMD, related macular degeneration; 1.34A {Homo sapiens} SCOP: b.22.1.0 PDB: 4nn0_A Probab=87.71 E-value=0.064 Score=51.88 Aligned_cols=75 Identities=15% Similarity=0.205 Sum_probs=51.2 Q ss_pred CCCCCCCCCCCCCCCCCCCCCCccccCcCCCCCCccccC----CCCCceeeecC-ceeeehHHHHhh--ccCCCCCCceE Q FBpp0290329 438 FGDASYYGRPEPPRQPGHSHKHEETLGLVDGEEPYFSAS----SSNMNMKIVPG-AVTFQNIDEMTK--KSALNPPGTLA 510 (787) Q Consensus 438 ~G~~g~~G~pgppg~~G~~~~~ep~~~~~~~~~P~~s~s----~~~~~v~iv~~-~~~~~t~d~m~~--~s~~sseGtl~ 510 (787) .+..+.|.. .+|.|+|..+ +.|+|+.. ...+++.|++| ..+...++.... ..+..+..+++ T Consensus 29 ~N~G~~yn~-----~TG~FTapv~-------G~Y~Fs~~~~~~~~~~~v~L~~Ng~~v~~~~~~~~~~~~~~~~S~s~vL 96 (148) T 4f3j_A 29 VNEQGHYDA-----VTGKFTCQVP-------GVYYFAVHATVYRASLQFDLVKNGESIASFFQFFGGWPKPASLSGGAMV 96 (148) T ss_dssp ECTTCCEET-----TTTEEECCSC-------EEEEEEEEEEEEEEEEEEEEEETTEEEEEEEECCCSCSSCEEEEEEEEE T ss_pred ECCCCCcCC-----CCCeEECCCC-------CEEEEEEEEEeCCCeEEEEEEECCEEEEEEEEecCCCCCcceeeeeEEE Confidence 344455554 5888888666 78888842 34577888888 333333332222 23467889999 Q ss_pred EecCCceEEEEEcC Q FBpp0290329 511 YITEEEALLVRVNK 524 (787) Q Consensus 511 yl~~~~el~vrv~~ 524 (787) +|..+|+||||+.. T Consensus 97 ~L~~GD~V~v~~~~ 110 (148) T 4f3j_A 97 RLEPEDQVWVQVGV 110 (148) T ss_dssp EECTTCEEEEECCS T ss_pred EECCCCEEEEEEEc Confidence 99999999999974No 14>2wnv_A C1Q chain A, complement C1Q subcomponent subunit A; immune system, secreted, collagen, recognition, disulfide bond, innate immunity; HET: NAG; 1.25A {Homo sapiens} SCOP: b.22.1.1 PDB: 2jg8_A 2wnu_A* 2jg9_A* 1pk6_A Probab=86.54 E-value=0.082 Score=50.06 Aligned_cols=68 Identities=13% Similarity=0.095 Sum_probs=46.2 Q ss_pred CCCCCCCCccccCcCCCCCCcccc---CCCCCceeeec-Ccee---eehHHH-Hhhc-cCCCCCCceEEecCCceEEEEE Q FBpp0290329 452 QPGHSHKHEETLGLVDGEEPYFSA---SSSNMNMKIVP-GAVT---FQNIDE-MTKK-SALNPPGTLAYITEEEALLVRV 522 (787) Q Consensus 452 ~~G~~~~~ep~~~~~~~~~P~~s~---s~~~~~v~iv~-~~~~---~~t~d~-m~~~-s~~sseGtl~yl~~~~el~vrv 522 (787) .+|+|+|..+ +.|+|+. ...++++.|++ |... ...+++ .... .+..+..++++|..+|+||||+ T Consensus 36 ~TG~Ftap~~-------G~Y~Fs~~~~~~~~~~v~L~~nN~~~i~~~~~~~d~~~~~~~~~~S~~~~L~L~~GD~V~v~~ 108 (134) T 2wnv_A 36 HSGRFVCTVP-------GYYYFTFQVLSQWEICLSIVSSSRGQVRRSLGFCDTTNKGLFQVVSGGMVLQLQQGDQVWVEK 108 (134) T ss_dssp TTTEEECCSC-------EEEEEEEEEEESSCEEEEEEEEETTEEECCCEEEECCCSSSCEEEEEEEEEEECTTCEEEEEE T ss_pred CCCEEeCCCC-------CEEEEEEEEEeCCcEEEEEEEeCCcEEEEEEEEeecCCCCccceecceEEEEEcCCCEEEEEE Confidence 5788888666 7788884 23567888888 5222 222222 2222 2456889999999999999999 Q ss_pred cCCc Q FBpp0290329 523 NKGW 526 (787) Q Consensus 523 ~~Gw 526 (787) ...+ T Consensus 109 ~~~~ 112 (134) T 2wnv_A 109 DPKK 112 (134) T ss_dssp EEEE T ss_pred ECCC Confidence 7533No 15>1ei8_A Collagen-like peptide (Pro-HYP-Gly)4-PG-(Pro-HYP- Gly)5; triple helix, contractIle protein; 2.00A {Synthetic} SCOP: k.3.1.1 Probab=84.58 E-value=1.6 Score=30.63 Aligned_cols=6 Identities=50% Similarity=1.043 Sum_probs=2.2 Q ss_pred CCCCCC Q FBpp0290329 82 GERGPK 87 (787) Q Consensus 82 G~~G~~ 87 (787) |..|++ T Consensus 6 Gp~Gpp 11 (29) T 1ei8_A 6 GPPGPP 11 (29) T ss_dssp CCCCCC T ss_pred CCCCCC Confidence 333333No 16>1pwb_A SP-D, PSP-D, pulmonary surfactant-associated protein D; collectin, C-type lectin, alpha-helical coiled coil, carbohydrate recognition domain; HET: GLC; 1.40A {Homo sapiens} SCOP: d.169.1.1 h.1.1.1 PDB: 1pw9_A* 3ikn_A* 3ikp_A* 3ikq_A* 3ikr_A* 4e52_A* 2rie_A* 2ggx_A* 2ggu_A* 2ork_A* 2orj_A* 2ria_A* 2rib_A* 2ric_A* 2rid_A* 2os9_A* 3dbz_A 3g81_A* 3g83_A* 1b08_A ... Probab=76.65 E-value=0.62 Score=44.84 Aligned_cols=12 Identities=25% Similarity=0.952 Sum_probs=9.4 Q ss_pred ccccccCceEEE Q FBpp0290329 732 RQSCDSKLIILC 743 (787) Q Consensus 732 ~~~C~~~~~vlC 743 (787) ..+|+.++..+| T Consensus 164 d~~C~~~~~~iC 175 (177) T 1pwb_A 164 DRACGEKRLVVC 175 (177) T ss_dssp EECTTSEEEEEE T ss_pred CccCCCCeeEEE Confidence 367888888888No 17>2ka3_A Emilin-1; C1Q-like domain, homotrimeric protein complex, beta-sandwich, structural protein, cell adhesion, extracellular matrix; NMR {Homo sapiens} SCOP: b.22.1.0 PDB: 2oii_A Probab=75.73 E-value=0.85 Score=44.75 Aligned_cols=78 Identities=12% Similarity=0.146 Sum_probs=46.6 Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCccccCcCCCCCCccccCC-----CCCceeeecCc-eeeeh----HH--HHh----- Q FBpp0290329 436 SFFGDASYYGRPEPPRQPGHSHKHEETLGLVDGEEPYFSASS-----SNMNMKIVPGA-VTFQN----ID--EMT----- 498 (787) Q Consensus 436 ~~~G~~g~~G~pgppg~~G~~~~~ep~~~~~~~~~P~~s~s~-----~~~~v~iv~~~-~~~~t----~d--~m~----- 498 (787) .+.+..+.|.. .+|+|+|..+ ++|||+... ..+.+.|+++- .+... ++ .+. T Consensus 38 v~~N~G~~Yn~-----~TG~FTapv~-------GvY~Fs~~~~~~~~~~~~~~L~~N~~~v~~~~~~~~~~~~~~~~~~~ 105 (162) T 2ka3_A 38 VLLNDGGYYDP-----ETGVFTAPLA-------GRYLLSAVLTGHRHEKVEAVLSRSNQGVARVDSGGYEPEGLENKPVA 105 (162) T ss_dssp EEEESSCCEET-----TTTEEECCCC-------EEEEEEECCCCCTTCCEEEEECTTTSCCCSSEEEC------------ T ss_pred EEECCCCCcCC-----CCCeEeceec-------cEEEEEEEEEecCCCEEEEEEEECCeEEEEEeecccccccccccccc Confidence 33455566654 6899998766 789998531 22445577762 22111 11 100 Q ss_pred -h--cc-CCCCCCceEEecCCceEEEEEcCC Q FBpp0290329 499 -K--KS-ALNPPGTLAYITEEEALLVRVNKG 525 (787) Q Consensus 499 -~--~s-~~sseGtl~yl~~~~el~vrv~~G 525 (787) . .+ +.++..+++.|..+|+||||+..| T Consensus 106 ~~q~~sg~~~S~s~vL~L~~GD~Vwl~l~~g 136 (162) T 2ka3_A 106 ESQPSPGTLGVFSLILPLQAGDTVCVDLVMG 136 (162) T ss_dssp -------CCCCCSSCCCCCTTCEEEEECCSC T ss_pred ccccccCceeeEEEEEEECCCCEEEEEEcCC Confidence 0 00 245668999999999999999754No 18>1rj8_A Ectodysplasin-A isoform EDA-A2; TNF domain, jelly roll, splice variant, trimer, hormone-GROW complex; 2.23A {Homo sapiens} SCOP: b.22.1.1 PDB: 1rj7_A Probab=75.35 E-value=0.58 Score=45.70 Aligned_cols=68 Identities=6% Similarity=0.056 Sum_probs=44.1 Q ss_pred CCCCCCCCccccCcCCCCCCcccc----C--CCCCceeeecC-ceeeehHHHHh---hccCCCCCCceEEecCCceEEEE Q FBpp0290329 452 QPGHSHKHEETLGLVDGEEPYFSA----S--SSNMNMKIVPG-AVTFQNIDEMT---KKSALNPPGTLAYITEEEALLVR 521 (787) Q Consensus 452 ~~G~~~~~ep~~~~~~~~~P~~s~----s--~~~~~v~iv~~-~~~~~t~d~m~---~~s~~sseGtl~yl~~~~el~vr 521 (787) ..|++.|..+ +.|||.. . ...+++.|+.+ ...++.++.+. ...+..+.+.|++|..+|+|||+ T Consensus 64 ~tG~f~~~~~-------G~Y~fy~qv~f~~~~~~~~~~l~~n~~~ll~~~~~~~~~~~~~~~~s~~~vl~L~~GD~V~v~ 136 (164) T 1rj8_A 64 RSGELEVLVD-------GTYFIYSQVYYINFTDFASYEVVVDEKPFLQCTRSIETGKTNYNTCYTAGVCLLKARQKIAVK 136 (164) T ss_dssp TTCCEEECSC-------EEEEEEEEEEEEEESSCEEEEEEETTEEEEEEEEEECCSSCEEEEEEEEEEEEECTTCEEEEE T ss_pred cCCEEEeCCC-------EEEEEEEEEEEccccCCceEEEEeCCceeEEEeecccCCCCCcceEEeeeEEEeCCCCEEEEE Confidence 4677776655 6777762 1 13456677776 33333333322 12356788999999999999999 Q ss_pred EcCCc Q FBpp0290329 522 VNKGW 526 (787) Q Consensus 522 v~~Gw 526 (787) |.+.- T Consensus 137 v~~~~ 141 (164) T 1rj8_A 137 MVHAD 141 (164) T ss_dssp ECSCS T ss_pred ecCCC Confidence 98654No 19>4dou_A Adiponectin; single-chain globular domain, calcium binding, C1Q-like DOMA growth factor, serum, hormone; 2.00A {Homo sapiens} SCOP: b.22.1.0 b.22.1.0 b.22.1.0 PDB: 1c3h_A 1c28_A Probab=74.70 E-value=0.48 Score=53.81 Aligned_cols=76 Identities=12% Similarity=0.223 Sum_probs=54.3 Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCccccCcCCCCCCccccC----CCCCceeeecC-ceeeehHHHHhhcc-CCCCCCceE Q FBpp0290329 437 FFGDASYYGRPEPPRQPGHSHKHEETLGLVDGEEPYFSAS----SSNMNMKIVPG-AVTFQNIDEMTKKS-ALNPPGTLA 510 (787) Q Consensus 437 ~~G~~g~~G~pgppg~~G~~~~~ep~~~~~~~~~P~~s~s----~~~~~v~iv~~-~~~~~t~d~m~~~s-~~sseGtl~ 510 (787) +.+..+.|.. .+|+|+|..+ +.|+|+.. ..++++.||+| ..+..++++..... +..+..+++ T Consensus 50 ~~N~g~~yn~-----~TG~Ftap~~-------G~Y~Fs~~~~~~~~~~~v~L~~Ng~~i~~~~~~~~~~~~~~~S~s~iL 117 (442) T 4dou_A 50 FYNQQNHYDG-----STGKFHCNIP-------GLYYFAYHITVYMKDVKVSLFKKDKAMLFTYDQYQENNVDQASGSVLL 117 (442) T ss_dssp EECTTCCEET-----TTTEEECCSC-------EEEEEEEEEEEEEEEEEEEEEETTEEEEEEEECCBTTBCEEEEEEEEE T ss_pred EECCCCCcCC-----CCCeEeCCCC-------eEEEEEEEEEecCCcEEEEEEECCEEEEEEecccCCCCcceeeeEEEE Confidence 3455566654 6899988766 78998852 34678889998 44444555543322 577889999 Q ss_pred EecCCceEEEEEcC Q FBpp0290329 511 YITEEEALLVRVNK 524 (787) Q Consensus 511 yl~~~~el~vrv~~ 524 (787) .|..+|+||||+.. T Consensus 118 ~L~~GD~Vwv~~~~ 131 (442) T 4dou_A 118 HLEVGDQVWLQVYG 131 (442) T ss_dssp EECTTCEEEEEEC- T ss_pred EccCCCEEEEEeec Confidence 99999999999974No 20>1pwb_A SP-D, PSP-D, pulmonary surfactant-associated protein D; collectin, C-type lectin, alpha-helical coiled coil, carbohydrate recognition domain; HET: GLC; 1.40A {Homo sapiens} SCOP: d.169.1.1 h.1.1.1 PDB: 1pw9_A* 3ikn_A* 3ikp_A* 3ikq_A* 3ikr_A* 4e52_A* 2rie_A* 2ggx_A* 2ggu_A* 2ork_A* 2orj_A* 2ria_A* 2rib_A* 2ric_A* 2rid_A* 2os9_A* 3dbz_A 3g81_A* 3g83_A* 1b08_A ... Probab=73.02 E-value=0.87 Score=43.79 Aligned_cols=7 Identities=0% Similarity=-0.054 Sum_probs=3.3 Q ss_pred eEEeeCC Q FBpp0290329 688 MVWHGSL 694 (787) Q Consensus 688 ~vW~Gs~ 694 (787) .+|.|++ T Consensus 112 ~~WiGl~ 118 (177) T 1pwb_A 112 AAFLSMT 118 (177) T ss_dssp CEECSCB T ss_pred eEEEeeE Confidence 3455543No 21>2dpr_A Conantokin-T, CON-T; conantoxin, nmdar antagonist, GLA-containing, metal B protein; HET: CGU; 1.70A {Conus tulipa} PDB: 1ont_A* Probab=67.10 E-value=2.8 Score=26.41 Aligned_cols=12 Identities=50% Similarity=0.717 Sum_probs=10.7 Q ss_pred hHHHHHHHHhhh Q FBpp0290329 775 ADEYAAHLENLL 786 (787) Q Consensus 775 ~~~~~~~~~~~~ 786 (787) |+||++.||+|. T Consensus 2 eeeyqemlenlr 13 (21) T 2dpr_A 2 EEEYQEMLENLR 13 (26) T ss_dssp CHHHHHHHHHHH T ss_pred cHHHHHHHHHHH Confidence 789999999985No 22>1o91_A Collagen alpha 1(VIII) chain; C1Q_LIKE_domain, extracellular matrix, adhesion, connective tissue, repeat, structural protein; HET: CPS; 1.9A {Mus musculus} SCOP: b.22.1.1 Probab=36.19 E-value=9.1 Score=37.94 Aligned_cols=55 Identities=25% Similarity=0.349 Sum_probs=25.7 Q ss_pred CcEEeCCccccccCCCCcccCCCc-eeecCCCccCCCCCCCcceEEeeCCCCcccccCccCC Q FBpp0290329 646 GDVLFNSWKGIFNGQGGFFSQAPR-IYSFSGKNVMTDSTWPMKMVWHGSLPNGERSMDTYCD 706 (787) Q Consensus 646 g~vl~~~~~~l~~~~~~~~~~~~~-i~~f~~~~~l~d~~~p~~~vW~Gs~~~g~~~~~~~C~ 706 (787) +.|+.|.-...-. .-++|+...+ +|.|+=+-.. ..+.+|..+..++......+|+ T Consensus 70 d~v~~N~G~~yn~-~TG~FTapv~G~Y~Fs~~~~~-----~~~~~~v~L~~Ng~~~~~~~~~ 125 (178) T 1o91_A 70 DKLLYNGRQNYNP-QTGIFTCEVPGVYYFAYHVHC-----KGGNVWVALFKNNEPMMYTYDE 125 (178) T ss_dssp CEEEEEETTCEET-TTTEEECCSCEEEEEEEEEEE-----EEEEEEEEEEETTEEEEEEEEC T ss_pred CEEEEcCCCCccC-CCCeEEeeCCeEEEEEEEEEe-----CCceEEEEEEECCEEEEEEEec Confidence 4555554333333 2235665555 7755322111 1245566666666554334443No 23>1buu_A Protein (mannose-binding protein A); lectin, HOST defense, metalloprotein, sugar binding protein; 1.90A {Rattus norvegicus} SCOP: d.169.1.1 h.1.1.1 Probab=29.73 E-value=13 Score=35.52 Aligned_cols=12 Identities=25% Similarity=0.656 Sum_probs=10.1 Q ss_pred ccccccCceEEE Q FBpp0290329 732 RQSCDSKLIILC 743 (787) Q Consensus 732 ~~~C~~~~~vlC 743 (787) ..+|+.++..+| T Consensus 153 d~~C~~~~~~IC 164 (168) T 1buu_A 153 DISCQASHTAVC 164 (168) T ss_dssp EECTTSCEEEEE T ss_pred CcCCCCCeeEEE Confidence 458999999998No 24>2ljw_A ALR2454 protein; novel fold, structural genomics, northeast structural genomi consortium, NESG, PSI-biology, protein structure initiative function; NMR {Nostoc SP} Probab=21.92 E-value=44 Score=30.70 Aligned_cols=14 Identities=29% Similarity=0.584 Sum_probs=12.3 Q ss_pred cChHHHHHHHHhhh Q FBpp0290329 773 KTADEYAAHLENLL 786 (787) Q Consensus 773 ~~~~~~~~~~~~~~ 786 (787) +||.||.+||+.+. T Consensus 45 lsE~eY~~hL~~Va 58 (110) T 2ljw_A 45 MNETEYQEHLDSVA 58 (110) T ss_dssp SCHHHHHHHHHHHH T ss_pred CCHHHHHHHHHHHH Confidence 79999999999863