Query         FBpp0290331 type=protein; loc=3L:join(7019749..7019898,7034503..7034538,7034635..7034703,7034972..7035038,7035170..7035315,7035744..7035881,7038005..7038151,7041018..7041131,7043466..7043720,7044926..7045003,7045109..7045355,7046334..7046488,7046586..7046678,7048842..7048964,7050565..7050695,7051242..7051421,7051486..7051722,7051977..7052052); ID=FBpp0290331; name=Mp-PH; parent=FBgn0260660,FBtr0301109; dbxref=REFSEQ:NP_001163359,GB_protein:ACZ94630,FlyBase:FBpp0290331,FlyBase_Annotation_IDs:CG42543-PH,FlyMine:FBpp0290331,modMine:FBpp0290331; MD5=5a260ae3e7d88e07bfa36f9920c2cf90; length=813; release=r6.06; species=Dmel;
Match_columns 813
No_of_seqs    710 out of 2647
Neff          6.0 
Searched_HMMs 35384

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
   1 1dy2_A Collagen alpha1(XV) cha 100.0 2.8E-63 7.8E-68  486.2  12.6  174  600-777     3-177 (180)
   2 1koe_A Endostatin; angiogenesi 100.0 1.1E-62 3.2E-67  485.9  10.9  170  604-773     1-171 (172)
   3 3hqv_A Collagen alpha-1(I) cha 100.0   5E-30 1.4E-34  314.1  41.2   31  459-489   998-1028(1056)
   4 3n3f_A Collagen alpha-1(XV) ch  99.4 5.7E-13 1.6E-17  107.4   5.5   52  522-573     2-53  (54)
   5 3hsh_A Endostatin, collagen al  99.4 3.6E-13   1E-17  109.2   4.1   52  522-573     4-55  (56)
   6 1o91_A Collagen alpha 1(VIII)   96.5 0.00018 5.2E-09   72.2  -2.9   67  487-560    83-155 (178)
   7 2wnv_C C1Q chain C, complement  88.9   0.071   2E-06   50.6  -0.8   66  487-559    40-109 (131)
   8 4dou_A Adiponectin; single-cha  88.9    0.07   2E-06   60.9  -1.1   77  472-560   191-273 (442)
   9 4ous_A Caprin-2; C1Q domain, W  88.4    0.12 3.3E-06   49.9   0.3   67  487-560    41-115 (143)
  10 4qqh_A Complement C1Q-like pro  88.0   0.065 1.8E-06   51.2  -1.8   67  487-560    41-116 (137)
  11 1gr3_A Collagen X; extracellul  87.9   0.068 1.9E-06   52.6  -1.8   76  473-560    56-137 (160)
  12 1ei8_A Collagen-like peptide (  85.1     1.5 4.2E-05   31.1   4.4    9  130-138    16-24  (29)
  13 4f3j_A Complement C1Q tumor ne  84.5    0.13 3.6E-06   50.0  -1.8   66  487-559    38-110 (148)
  14 2wnv_B C1Q chain B, complement  82.4    0.25 7.1E-06   47.1  -0.7   66  487-559    39-111 (136)
  15 2wnv_A C1Q chain A, complement  76.2    0.33 9.3E-06   46.1  -2.0   69  487-562    36-113 (134)
  16 1pwb_A SP-D, PSP-D, pulmonary   75.7    0.67 1.9E-05   44.7   0.0   12  758-769   164-175 (177)
  17 1rj8_A Ectodysplasin-A isoform  69.4     1.1   3E-05   44.0  -0.3   68  487-561    64-141 (164)
  18 2ka3_A Emilin-1; C1Q-like doma  68.8     1.4 4.1E-05   43.3   0.5   77  472-560    39-136 (162)
  19 4dou_A Adiponectin; single-cha  66.6    0.92 2.6E-05   51.8  -1.6   75  473-559    51-131 (442)
  20 2dpr_A Conantokin-T, CON-T; co  64.5     3.6  0.0001   26.1   1.5   12  801-812     2-13  (21)
  21 1buu_A Protein (mannose-bindin  39.2     7.7 0.00022   37.4   0.0   12  758-769   153-164 (168)
  22 1o91_A Collagen alpha 1(VIII)   36.7     8.8 0.00025   38.2   0.0   55  672-732    70-125 (178)
  23 2ljw_A ALR2454 protein; novel   24.3      40  0.0011   31.2   2.0   14  799-812    45-58  (110)

No 1
>1dy2_A Collagen alpha1(XV) chain; angiogenesis inhibitor; 2.0A {Mus musculus} SCOP: d.169.1.5 Probab=100.00 E-value=2.8e-63 Score=486.19 Aligned_cols=174 Identities=51% Similarity=0.964 Sum_probs=164.3 Q ss_pred CCCCCCcEEEEEcCCCCCCCCCCcccchHHHHHHhhhCCCCCceeEEEeccccCcccccCCCCC-CCccccCCCcEEecC Q FBpp0290331 600 PLLNTPTLRVAALNEPSTGDLQGIRGADFACYRQGRRAGLLGTFKAFLSSRVQNLDTIVRPADR-DLPVVNTRGDVLFNS 678 (813) Q Consensus 600 ~~~~~~~l~l~a~~~~~~G~lgGi~GAD~~C~~~A~~~g~~gt~rA~Ls~~~~~~~~~V~~~dr-~~P~vn~~g~vl~~~ 678 (813) ...++|+|||||||+|++|||+ ||++||+||+++|++||||||||+++||+++||+++|| ++||||+||+|||+| T Consensus 3 ~~~~~~~L~lvALN~P~sG~m~----AD~~C~~qAraaGl~gTfRAfLSs~~qdl~~iV~~~DR~~~PivNlkGevLf~s 78 (180) T 1dy2_A 3 LAYERPVLHLVALNTPVAGDIR----ADFQCFQQARAAGLLSTFRAFLSSHLQDLSTVVRKAERFGLPIVNLKGQVLFNN 78 (180) T ss_dssp ----CCCEEEEECSSCBCSBCC----HHHHHHHHHHHTTCCSCEEESSCBTTBCGGGSSCGGGSSSCCEECTTSCEEESC T ss_pred ccCCCccEEEEEcCCCCCCCch----HHHHHHHHHHHhCCCCceEEEeecccccCccccCHhHcCCCCeEcCCCCEEecC Confidence 4457899999999999999999 99999999999999999999999999999999999999 799999999999999 Q ss_pred ccccccCCCCcccCCCceeccCCCccCCCCCCCcceEEeeCCCCcccccCccCCccccCCCCceeecccCCccccccccc Q FBpp0290331 679 WKGIFNGQGGFFSQAPRIYSFSGKNVMTDSTWPMKMVWHGSLPNGERSMDTYCDAWHSGDHLKGSFASNLDGHKLLEQKR 758 (813) Q Consensus 679 ~~~l~~~~~~~~~~~~~i~~f~~~~~l~~~~~~~k~vW~Gs~~~g~~~~~~~C~~W~s~~~~~~G~as~~~~~~l~~~~~ 758 (813) |++||++++++|+.+.+||+||+||||+|++||||.|||||++||++.+++||++|||++.+++|+||+|++++||.|+. T Consensus 79 w~~lf~g~~~~l~~~~~Iysfdg~dVl~d~~wP~K~vWhGS~~~G~r~~d~~C~~W~s~~~~~~G~Assl~~g~ll~q~~ 158 (180) T 1dy2_A 79 WDSIFSGDGGQFNTHIPIYSFDGRDVMTDPSWPQKVVWHGSNPHGVRLVDKYCEAWRTTDMAVTGFASPLSTGKILDQKA 158 (180) T ss_dssp SGGGGSSSCCBCCTTSCCBBTTSCBTTTCTTCSSCEEECCBCTTSCBCTTSBHHHHBCCCTTCEEEEEEGGGTBSSCCEE T ss_pred HHHHhCCCCCccCCCCCeeccCCcccccCCCccccccccCCCCCCCCcccccccCCccCCCCceEeeeecCCCCcccCcc Confidence 99999999889999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred cccccCceEEEEecccHHH Q FBpp0290331 759 QSCDSKLIILCVEALSQDR 777 (813) Q Consensus 759 ~~C~~~~~vlCvE~~~~~~ 777 (813) +||+++||||||||+.... T Consensus 159 ~sC~~~~ivLCIEn~~~~~ 177 (180) T 1dy2_A 159 YSCANRLIVLCIENSFMTD 177 (180) T ss_dssp EETTSCBBCEEEECCC--- T ss_pred cCCCCceEEEEEEcccccc Confidence 9999999999999986543
No 2
>1koe_A Endostatin; angiogenesis inhibitor, collagen XVIII, non-collageneous domain, heparin-binding domain; 1.50A {Mus musculus} SCOP: d.169.1.5 PDB: 1dy0_A 1dy1_A 1bnl_A Probab=100.00 E-value=1.1e-62 Score=485.91 Aligned_cols=170 Identities=48% Similarity=0.921 Sum_probs=166.4 Q ss_pred CCcEEEEEcCCCCCCCCCCcccchHHHHHHhhhCCCCCceeEEEeccccCcccccCCCCC-CCccccCCCcEEecCcccc Q FBpp0290331 604 TPTLRVAALNEPSTGDLQGIRGADFACYRQGRRAGLLGTFKAFLSSRVQNLDTIVRPADR-DLPVVNTRGDVLFNSWKGI 682 (813) Q Consensus 604 ~~~l~l~a~~~~~~G~lgGi~GAD~~C~~~A~~~g~~gt~rA~Ls~~~~~~~~~V~~~dr-~~P~vn~~g~vl~~~~~~l 682 (813) +|+|||||||+||+|||+||+|||++||+||+++|++||||||||+++||+++||+++|| ++||||+||||||+||+|| T Consensus 1 ~~~l~lvaln~p~~GnlgGi~GAD~~C~~~A~aaGl~gtfRAfLSs~~q~~~~iV~~~dr~~~P~vN~kg~vl~~~~~~l 80 (172) T 1koe_A 1 QPVLHLVALNTPLSGGMRGIRGADFQCFQQARAVGLSGTFRAFLSSRLQDLYSIVRRADRGSVPIVNLKDEVLSPSWDSL 80 (172) T ss_dssp CCCEEEEECSSCBCSCSSHHHHHHHHHHHHHHHTTCCSCEEESCCBTTBCGGGGSCGGGTTTCCEECTTCCEEESCHHHH T ss_pred CCceEEEEeCCCcCCCcccchhHHHHHHHHHHhcCCCCeeEEEEEcccCCccceeccccccCCCeECCcCcEEeCCHHHh Confidence 478999999999999999999999999999999999999999999999999999999999 7999999999999999999 Q ss_pred ccCCCCcccCCCceeccCCCccCCCCCCCcceEEeeCCCCcccccCccCCccccCCCCceeecccCCccccccccccccc Q FBpp0290331 683 FNGQGGFFSQAPRIYSFSGKNVMTDSTWPMKMVWHGSLPNGERSMDTYCDAWHSGDHLKGSFASNLDGHKLLEQKRQSCD 762 (813) Q Consensus 683 ~~~~~~~~~~~~~i~~f~~~~~l~~~~~~~k~vW~Gs~~~g~~~~~~~C~~W~s~~~~~~G~as~~~~~~l~~~~~~~C~ 762 (813) |++++++|+++..||+||+||||+|++||+|+|||||++||+|..++||++|||++.+++|+||+|++++||+|+.++|+ T Consensus 81 ~~~~~~~~~~~~~i~sfn~~dvl~d~~wp~k~vWtGs~~~G~~~~~~~C~~Wts~~~~~~G~assl~~~~ll~q~~~sCs 160 (172) T 1koe_A 81 FSGSQGQLQPGARIFSFDGRDVLRHPAWPQKSVWHGSDPSGRRLMESYCETWRTETTGATGQASSLLSGRLLEQKAASCH 160 (172) T ss_dssp TSSSCSBCCTTCCCBBTTSCBTTTCTTSSSCEEECCBCTTSCBCTTSBHHHHTCCCTTCEEEEEEGGGTBSCCCEEEETT T ss_pred cCCCCccccCCCceEccCCCccccCCCCccceeEECCCCCCcCcCCCcccCCcCCCCCceEeeccCCCCCcccCcCCCcC Confidence 99998899999999999999999999999999999999999998899999999999999999999999999999999999 Q ss_pred cCceEEEEecc Q FBpp0290331 763 SKLIILCVEAL 773 (813) Q Consensus 763 ~~~~vlCvE~~ 773 (813) ++|+||||||+ T Consensus 161 ~~~~vLCIE~~ 171 (172) T 1koe_A 161 NSYIVLCIENS 171 (172) T ss_dssp SCBBCEEEECC T ss_pred CCcEEEEEeec Confidence 99999999996
No 3
>3hqv_A Collagen alpha-1(I) chain; native, in SITU, molecular envelope, triple-helical, supermolecular, supramolecular, packing structure; 5.16A {Rattus norvegicus} SCOP: i.25.1.1 PDB: 3hr2_A Probab=100.00 E-value=5e-30 Score=314.10 Aligned_cols=31 Identities=45% Similarity=0.787 Sum_probs=12.6 Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC Q FBpp0290331 459 GPKGEPGVDSRSSFFGDASYYGRPEPPRQPG 489 (813) Q Consensus 459 G~~G~~G~~g~~~~~G~~g~~G~pgppg~~G 489 (813) |+.|++|..+.++..+..+..+.+++++.++ T Consensus 998 G~~G~~G~~G~~G~~G~~G~~G~pGppGpPG 1028 (1056) T 3hqv_A 998 GPIGPPGPRGRTGDSGPAGPPGPPGPPGPPG 1028 (1056) T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC Confidence 3333333333333444444444444444444
No 4
>3n3f_A Collagen alpha-1(XV) chain; extracellular matrix, basement membrane, collagen trimerization domain, folding, association, chain selection helix; 2.00A {Homo sapiens} Probab=99.36 E-value=5.7e-13 Score=107.41 Aligned_cols=52 Identities=35% Similarity=0.742 Sum_probs=49.4 Q ss_pred CeeeeehhHhhhcccCCCCCCceEEeccCceEEEEEcCCceeeecCccccCC Q FBpp0290331 522 GAVTFQNIDEMTKKSALNPPGTLAYITEEEALLVRVNKGWQYIALGTLVPIA 573 (813) Q Consensus 522 Gv~~~~t~d~m~~~s~~sseGtlayl~~~~el~vrv~~Gw~~I~lg~~~p~~ 573 (813) ++++|+|+++|++.++..++|+|+|++++++|||||++|||+|+||+++|++ T Consensus 2 ~v~~~~t~~~M~~~~~~~~eGtL~yv~d~~eLyiRVr~Gwr~V~Lg~~ip~p 53 (54) T 3n3f_A 2 LVTAFSNMDDMLQKAHLVIEGTFIYLRDSTEFFIRVRDGWKKLQLGELIPIP 53 (54) T ss_dssp CEEEESSHHHHHTTGGGSCTTEEEEETTTTEEEEEETTEEEECCCCCCCCCC T ss_pred CcEEEecHHHHHhhCccCCCeEEEEEEecceEEEEEcCceeeeeecccccCC Confidence 4688999999999999999999999999999999999999999999999874
No 5
>3hsh_A Endostatin, collagen alpha-1(XVIII) chain; extracellular matrix, basement membrane, collagen trimerization domain, folding, association; 1.80A {Homo sapiens} PDB: 3hon_A Probab=99.36 E-value=3.6e-13 Score=109.25 Aligned_cols=52 Identities=27% Similarity=0.484 Sum_probs=50.3 Q ss_pred CeeeeehhHhhhcccCCCCCCceEEeccCceEEEEEcCCceeeecCccccCC Q FBpp0290331 522 GAVTFQNIDEMTKKSALNPPGTLAYITEEEALLVRVNKGWQYIALGTLVPIA 573 (813) Q Consensus 522 Gv~~~~t~d~m~~~s~~sseGtlayl~~~~el~vrv~~Gw~~I~lg~~~p~~ 573 (813) |+++|+|+++|++.++..++|+|+|+++++||||||++|||+|+|+.++|++ T Consensus 4 gv~~~~t~~~ml~~~~~~~eGtL~yv~d~~eLyiRVr~Gwr~V~Lg~~~pip 55 (56) T 3hsh_A 4 GVRLWATRQAMLGQVHEVPEGWLIFVAEQEELYVRVQNGFRKVQLEARTPLP 55 (56) T ss_dssp CEEEESSHHHHHHHGGGSCTTCEEEETTTTEEEEEETTEEEEECEEEEEECC T ss_pred cEEEEecHHHHHhhCccCCCeEEEEEEecceEEEEEcCcEEEEeecccccCC Confidence 6889999999999999999999999999999999999999999999999986
No 6
>1o91_A Collagen alpha 1(VIII) chain; C1Q_LIKE_domain, extracellular matrix, adhesion, connective tissue, repeat, structural protein; HET: CPS; 1.9A {Mus musculus} SCOP: b.22.1.1 Probab=96.54 E-value=0.00018 Score=72.17 Aligned_cols=67 Identities=12% Similarity=0.138 Sum_probs=48.5 Q ss_pred CCCCCCCCccccCCCCCCCCccccC----CCCCceeeec-CeeeeehhHhhhccc-CCCCCCceEEeccCceEEEEEcCC Q FBpp0290331 487 QPGHSHKHEETLGLVDGEEPYFSAS----SSNMNMKIVP-GAVTFQNIDEMTKKS-ALNPPGTLAYITEEEALLVRVNKG 560 (813) Q Consensus 487 ~~G~~~~~~~~~~~~~~~~P~~s~s----~s~~~v~lV~-Gv~~~~t~d~m~~~s-~~sseGtlayl~~~~el~vrv~~G 560 (813) .+|.|.|..+ ..|||+.. ..++++.|++ +..+..++++..+.. +..+..++++|...|+||||+..+ T Consensus 83 ~TG~FTapv~-------G~Y~Fs~~~~~~~~~~~v~L~~Ng~~~~~~~~~~~~~~~~~~S~s~vL~L~~GD~V~l~l~~~ 155 (178) T 1o91_A 83 QTGIFTCEVP-------GVYYFAYHVHCKGGNVWVALFKNNEPMMYTYDEYKKGFLDQASGSAVLLLRPGDQVFLQMPSE 155 (178) T ss_dssp TTTEEECCSC-------EEEEEEEEEEEEEEEEEEEEEETTEEEEEEEECCBTTBCEEEEEEEEEEECTTCEEEEECCCG T ss_pred CCCeEEeeCC-------eEEEEEEEEEeCCceEEEEEEECCEEEEEEEecCCCCcceEEeeEEEEEeCCCCEEEEEEecC Confidence 4677776544 66887753 2467888988 777766666544332 467889999999999999999754
No 7
>2wnv_C C1Q chain C, complement C1Q subcomponent subunit C; immune system, secreted, collagen, recognition, disulfide bond, innate immunity; HET: NAG; 1.25A {Homo sapiens} SCOP: b.22.1.1 PDB: 2jg8_C 2wnu_C* 2jg9_C* 1pk6_C Probab=88.95 E-value=0.071 Score=50.56 Aligned_cols=66 Identities=18% Similarity=0.225 Sum_probs=46.8 Q ss_pred CCCCCCCCccccCCCCCCCCccccC---CCCCceeeec-CeeeeehhHhhhcccCCCCCCceEEeccCceEEEEEcC Q FBpp0290331 487 QPGHSHKHEETLGLVDGEEPYFSAS---SSNMNMKIVP-GAVTFQNIDEMTKKSALNPPGTLAYITEEEALLVRVNK 559 (813) Q Consensus 487 ~~G~~~~~~~~~~~~~~~~P~~s~s---~s~~~v~lV~-Gv~~~~t~d~m~~~s~~sseGtlayl~~~~el~vrv~~ 559 (813) .+|.+.|..+ +.|+|+.. ..++++.|++ +..+...++......+..+..++++|..+|+||||+.. T Consensus 40 ~tG~Ftap~~-------G~Y~Fs~~~~~~~~~~v~L~~Ng~~~~~~~~~~~~~~~~~S~s~vL~L~~GD~V~v~~~~ 109 (131) T 2wnv_C 40 STGKFTCKVP-------GLYYFVYHASHTANLCVLLYRSGVKVVTFCGHTSKTNQVNSGGVLLRLQVGEEVWLAVND 109 (131) T ss_dssp TTTEEECSSC-------EEEEEEEEEEESSCEEEEEEETTEEEEEEEECCSSSCEEEEEEEEEEECTTCEEEEEEEE T ss_pred CCCEEEcCCC-------eEEEEEEEEEeCCEEEEEEEECCEEEEEEEecCCCCcceEeeEEEEEECCCCEEEEEEcC Confidence 5777777554 66777753 4578888988 65555444332233357788999999999999999963
No 8
>4dou_A Adiponectin; single-chain globular domain, calcium binding, C1Q-like DOMA growth factor, serum, hormone; 2.00A {Homo sapiens} SCOP: b.22.1.0 b.22.1.0 b.22.1.0 PDB: 1c3h_A 1c28_A Probab=88.85 E-value=0.07 Score=60.92 Aligned_cols=77 Identities=12% Similarity=0.222 Sum_probs=57.9 Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCccccCCCCCCCCccccC----CCCCceeeec-CeeeeehhHhhhccc-CCCCCCceE Q FBpp0290331 472 FFGDASYYGRPEPPRQPGHSHKHEETLGLVDGEEPYFSAS----SSNMNMKIVP-GAVTFQNIDEMTKKS-ALNPPGTLA 545 (813) Q Consensus 472 ~~G~~g~~G~pgppg~~G~~~~~~~~~~~~~~~~P~~s~s----~s~~~v~lV~-Gv~~~~t~d~m~~~s-~~sseGtla 545 (813) +.+..+++.. .+|++.|..+ +.|||+.. ..++++.||+ +..+..++++..+.. ++++.++|+ T Consensus 191 ~~N~g~~yd~-----~tG~Ftc~v~-------G~Y~Fs~~~~~~~~~~~v~L~~Ng~~~~~~~~~~~~~~~~~~S~s~vL 258 (442) T 4dou_A 191 FYNQQNHYDG-----STGKFHCNIP-------GLYYFAYHITVYMKDVKVSLFKKDKAMLFTYDQYQENNVDQASGSVLL 258 (442) T ss_dssp EECTTCCEET-----TTTEEECCSC-------EEEEEEEEEEEEEEEEEEEEEETTEEEEEEEECCBTTBCEEEEEEEEE T ss_pred EECCCCCcCC-----CCCeEecccc-------eEEEEEEEEEecCCcEEEEEEECCceEEEEEeccCCCcccccceeEEE Confidence 3445555553 5788888665 77888853 3578999999 777777777654433 578999999 Q ss_pred EeccCceEEEEEcCC Q FBpp0290331 546 YITEEEALLVRVNKG 560 (813) Q Consensus 546 yl~~~~el~vrv~~G 560 (813) .|..+|+||||+.++ T Consensus 259 ~L~~GD~Vwl~~~~~ 273 (442) T 4dou_A 259 HLEVGDQVWLQVYGE 273 (442) T ss_dssp EECTTCEEEEEECSS T ss_pred EecCCCEEEEEEecc Confidence 999999999999764
No 9
>4ous_A Caprin-2; C1Q domain, WNT signaling, signaling protein; 1.05A {Danio rerio} SCOP: b.22.1.0 PDB: 4oul_A 4oum_A* Probab=88.44 E-value=0.12 Score=49.94 Aligned_cols=67 Identities=9% Similarity=0.118 Sum_probs=47.0 Q ss_pred CCCCCCCCccccCCCCCCCCccccC------CCCCceeeec-CeeeeehhHhhhc-ccCCCCCCceEEeccCceEEEEEc Q FBpp0290331 487 QPGHSHKHEETLGLVDGEEPYFSAS------SSNMNMKIVP-GAVTFQNIDEMTK-KSALNPPGTLAYITEEEALLVRVN 558 (813) Q Consensus 487 ~~G~~~~~~~~~~~~~~~~P~~s~s------~s~~~v~lV~-Gv~~~~t~d~m~~-~s~~sseGtlayl~~~~el~vrv~ 558 (813) .+|.+.|..+ +.|||+.. ...+++.|++ +..+...++.... ..+.++..++++|..+|+||||+. T Consensus 41 ~TG~Ftapv~-------G~Y~Fs~~~~~~~~~~~~~v~L~~Ng~~~~~~~~~~~~~~~~~~S~s~vL~L~~GD~V~v~~~ 113 (143) T 4ous_A 41 GSGRFTCPAT-------GAYVFIFHILKLAISVPLYINLMRNEEVMVSAYANDGAPDHETASNHAVLQLFQGDQVWLRLH 113 (143) T ss_dssp TTTEEECSSS-------EEEEEEEEEEBCSSSSCEEEEEEETTEEEEEEEECCSSCCCCEEEEEEEEEECTTCEEEEEEE T ss_pred cCCEEECCCC-------EEEEEEEEEEeeCCCcEEEEEEEECCEEEEEEEecCCCCCccEEeeeEEEEECCCCEEEEEEC Confidence 5788877654 67888742 2357788888 6555554443222 235678899999999999999998 Q ss_pred CC Q FBpp0290331 559 KG 560 (813) Q Consensus 559 ~G 560 (813) ++ T Consensus 114 ~g 115 (143) T 4ous_A 114 RG 115 (143) T ss_dssp ES T ss_pred CC Confidence 65
No 10
>4qqh_A Complement C1Q-like protein 3; jelly roll fold, brain-specific angiogenesis inhibitor coupled receptor 3, extracellular, protein binding; 1.20A {Mus musculus} PDB: 4qqp_A 4qq2_A 4d7y_A 4qpy_A Probab=88.02 E-value=0.065 Score=51.20 Aligned_cols=67 Identities=9% Similarity=0.155 Sum_probs=46.0 Q ss_pred CCCCCCCCccccCCCCCCCCccccC-------CCCCceeeec-CeeeeehhHhh-hcccCCCCCCceEEeccCceEEEEE Q FBpp0290331 487 QPGHSHKHEETLGLVDGEEPYFSAS-------SSNMNMKIVP-GAVTFQNIDEM-TKKSALNPPGTLAYITEEEALLVRV 557 (813) Q Consensus 487 ~~G~~~~~~~~~~~~~~~~P~~s~s-------~s~~~v~lV~-Gv~~~~t~d~m-~~~s~~sseGtlayl~~~~el~vrv 557 (813) .+|.+.|..+ +.|+|+.. ...+++.|++ +..+...+++. ....+.++..++++|..+|+||||+ T Consensus 41 ~TG~Ftap~~-------G~Y~Fs~~~~~~~~~~~~~~v~L~~Ng~~~~~~~~~~~~~~~~~~S~s~vL~L~~GD~V~l~~ 113 (137) T 4qqh_A 41 TTGKFTCSIP-------GIYFFTYHVLMRGGDGTSMWADLCKNNQVRASAIAQDADQNYDYASNSVVLHLEPGDEVYIKL 113 (137) T ss_dssp TTTEEECCSC-------EEEEEEEEEEBCSSSCSEEEEEEEETTEEEEEEEEECTTCCCCEEEEEEEEEECTTCEEEEEE T ss_pred CCCEEECCCC-------eEEEEEEEEEEecCCCCEEEEEEEECCEEEEEEEEeCCCCcccEecceEEEEeCCCCEEEEEE Confidence 5777777554 66787742 1256788888 65554444322 2223567889999999999999999 Q ss_pred cCC Q FBpp0290331 558 NKG 560 (813) Q Consensus 558 ~~G 560 (813) ..+ T Consensus 114 ~~g 116 (137) T 4qqh_A 114 DGG 116 (137) T ss_dssp EEE T ss_pred cCC Confidence 753
No 11
>1gr3_A Collagen X; extracellular matrix, connective tissue; HET: CPS; 2.0A {Homo sapiens} SCOP: b.22.1.1 Probab=87.87 E-value=0.068 Score=52.61 Aligned_cols=76 Identities=16% Similarity=0.223 Sum_probs=53.6 Q ss_pred CCCCCCCCCCCCCCCCCCCCCCccccCCCCCCCCccccC----CCCCceeeec-CeeeeehhHhhhccc-CCCCCCceEE Q FBpp0290331 473 FGDASYYGRPEPPRQPGHSHKHEETLGLVDGEEPYFSAS----SSNMNMKIVP-GAVTFQNIDEMTKKS-ALNPPGTLAY 546 (813) Q Consensus 473 ~G~~g~~G~pgppg~~G~~~~~~~~~~~~~~~~P~~s~s----~s~~~v~lV~-Gv~~~~t~d~m~~~s-~~sseGtlay 546 (813) .+..+.+.. .+|.+.|..+ +.|||+.. ..++++.|++ +..+...+++..+.. ++++..++++ T Consensus 56 ~N~G~~yn~-----~TG~FTapv~-------G~Y~Fsf~~~~~~~~~~v~L~~Ng~~v~~~~~~~~~~~~~~~S~s~vL~ 123 (160) T 1gr3_A 56 YNRQQHYDP-----RTGIFTCQIP-------GIYYFSYHVHVKGTHVWVGLYKNGTPVMYTYDEYTKGYLDQASGSAIID 123 (160) T ss_dssp ECTTCCEET-----TTTEEECSSC-------EEEEEEEEEEEEEEEEEEEEEETTEEEEEEEECCBTTBCEEEEEEEEEE T ss_pred ECCCCcccC-----cCCEEEeccC-------CEEEEEEEEEeCCCcEEEEEEECCEEEEEEEecCCCCceeEEeeeEEEE Confidence 344455553 5788877655 67888753 2357888888 776666666544333 4678899999 Q ss_pred eccCceEEEEEcCC Q FBpp0290331 547 ITEEEALLVRVNKG 560 (813) Q Consensus 547 l~~~~el~vrv~~G 560 (813) |..+|+||||+..+ T Consensus 124 L~~GD~V~l~l~~~ 137 (160) T 1gr3_A 124 LTENDQVWLQLPNA 137 (160) T ss_dssp ECTTCEEEEECCCT T ss_pred ECCCCEEEEEEecC Confidence 99999999999754
No 12
>1ei8_A Collagen-like peptide (Pro-HYP-Gly)4-PG-(Pro-HYP- Gly)5; triple helix, contractIle protein; 2.00A {Synthetic} SCOP: k.3.1.1 Probab=85.12 E-value=1.5 Score=31.06 Aligned_cols=9 Identities=100% Similarity=2.416 Sum_probs=3.3 Q ss_pred CCCCCCCCC Q FBpp0290331 130 PGPPGPPGP 138 (813) Q Consensus 130 pGppGppGp 138 (813) +|++|++|+ T Consensus 16 pG~~G~pG~ 24 (29) T 1ei8_A 16 PGPPGPPGP 24 (29) T ss_dssp CCCCCCCCC T ss_pred CCCCCCCCC Confidence 333333333
No 13
>4f3j_A Complement C1Q tumor necrosis factor-related PROT; late-onset retinal macular degeneration, L-ORMD, L-ORD, AMD, related macular degeneration; 1.34A {Homo sapiens} SCOP: b.22.1.0 PDB: 4nn0_A Probab=84.52 E-value=0.13 Score=50.02 Aligned_cols=66 Identities=17% Similarity=0.220 Sum_probs=47.2 Q ss_pred CCCCCCCCccccCCCCCCCCccccC----CCCCceeeec-CeeeeehhHhhhc--ccCCCCCCceEEeccCceEEEEEcC Q FBpp0290331 487 QPGHSHKHEETLGLVDGEEPYFSAS----SSNMNMKIVP-GAVTFQNIDEMTK--KSALNPPGTLAYITEEEALLVRVNK 559 (813) Q Consensus 487 ~~G~~~~~~~~~~~~~~~~P~~s~s----~s~~~v~lV~-Gv~~~~t~d~m~~--~s~~sseGtlayl~~~~el~vrv~~ 559 (813) .+|.+.|..+ +.|+|+.. ...+++.|++ +..+...++.... ..+..+..++++|..+|+||||+.. T Consensus 38 ~TG~FTapv~-------G~Y~Fs~~~~~~~~~~~v~L~~Ng~~v~~~~~~~~~~~~~~~~S~s~vL~L~~GD~V~v~~~~ 110 (148) T 4f3j_A 38 VTGKFTCQVP-------GVYYFAVHATVYRASLQFDLVKNGESIASFFQFFGGWPKPASLSGGAMVRLEPEDQVWVQVGV 110 (148) T ss_dssp TTTEEECCSC-------EEEEEEEEEEEEEEEEEEEEEETTEEEEEEEECCCSCSSCEEEEEEEEEEECTTCEEEEECCS T ss_pred CCCeEECCCC-------CEEEEEEEEEeCCCeEEEEEEECCEEEEEEEEecCCCCCcceeeeeEEEEECCCCEEEEEEEc Confidence 5788877655 67888753 3457888888 6666555443322 2346788999999999999999974
No 14
>2wnv_B C1Q chain B, complement C1Q subcomponent subunit B; immune system, secreted, collagen, recognition, disulfide bond, innate immunity; HET: NAG; 1.25A {Homo sapiens} SCOP: b.22.1.1 PDB: 2jg8_B 2wnu_B* 2jg9_B* 1pk6_B Probab=82.37 E-value=0.25 Score=47.07 Aligned_cols=66 Identities=9% Similarity=0.170 Sum_probs=44.6 Q ss_pred CCCCCCCCccccCCCCCCCCccccC---CCCCceeeec-Ceee--eehhHhhhcc-cCCCCCCceEEeccCceEEEEEcC Q FBpp0290331 487 QPGHSHKHEETLGLVDGEEPYFSAS---SSNMNMKIVP-GAVT--FQNIDEMTKK-SALNPPGTLAYITEEEALLVRVNK 559 (813) Q Consensus 487 ~~G~~~~~~~~~~~~~~~~P~~s~s---~s~~~v~lV~-Gv~~--~~t~d~m~~~-s~~sseGtlayl~~~~el~vrv~~ 559 (813) .+|.+.|..+ +.|||+.. ..++++.||+ +..+ ..++++..+. .+.++..++++|..+|+||||+.. T Consensus 39 ~TG~Ftap~~-------G~Y~Fs~~~~~~~~~~v~L~~Ng~~i~~~~~~~~~~~~~~~~~S~s~vL~L~~GD~V~v~~~~ 111 (136) T 2wnv_B 39 RSGKFTCKVP-------GLYYFTYHASSRGNLCVNLMRGRERAQKVVTFCDYAYNTFQVTTGGMVLKLEQGENVFLQATD 111 (136) T ss_dssp TTTEEECSSC-------EEEEEEEEEEESSCEEEEEEEESSSCEEEEEEEECCSSSCEEEEEEEEEEECTTCEEEEEEEE T ss_pred CCCEEECCCC-------CEEEEEEEEEeCCeEEEEEEECCEEeEEEEEEeecCCCcccccceeEEEEECCCCEEEEEEeC Confidence 5788877655 67888753 3578888888 4332 2233332222 245678899999999999999974
No 15
>2wnv_A C1Q chain A, complement C1Q subcomponent subunit A; immune system, secreted, collagen, recognition, disulfide bond, innate immunity; HET: NAG; 1.25A {Homo sapiens} SCOP: b.22.1.1 PDB: 2jg8_A 2wnu_A* 2jg9_A* 1pk6_A Probab=76.23 E-value=0.33 Score=46.09 Aligned_cols=69 Identities=12% Similarity=0.094 Sum_probs=44.8 Q ss_pred CCCCCCCCccccCCCCCCCCccccC---CCCCceeeec-C-eee--eehhHh-hhcc-cCCCCCCceEEeccCceEEEEE Q FBpp0290331 487 QPGHSHKHEETLGLVDGEEPYFSAS---SSNMNMKIVP-G-AVT--FQNIDE-MTKK-SALNPPGTLAYITEEEALLVRV 557 (813) Q Consensus 487 ~~G~~~~~~~~~~~~~~~~P~~s~s---~s~~~v~lV~-G-v~~--~~t~d~-m~~~-s~~sseGtlayl~~~~el~vrv 557 (813) .+|.+.|..+ +.|+|+.. ..++++.|++ . ..+ ...+++ .... .+.++..++++|..+|+||||+ T Consensus 36 ~TG~Ftap~~-------G~Y~Fs~~~~~~~~~~v~L~~nN~~~i~~~~~~~d~~~~~~~~~~S~~~~L~L~~GD~V~v~~ 108 (134) T 2wnv_A 36 HSGRFVCTVP-------GYYYFTFQVLSQWEICLSIVSSSRGQVRRSLGFCDTTNKGLFQVVSGGMVLQLQQGDQVWVEK 108 (134) T ss_dssp TTTEEECCSC-------EEEEEEEEEEESSCEEEEEEEEETTEEECCCEEEECCCSSSCEEEEEEEEEEECTTCEEEEEE T ss_pred CCCEEeCCCC-------CEEEEEEEEEeCCcEEEEEEEeCCcEEEEEEEEeecCCCCccceecceEEEEEcCCCEEEEEE Confidence 5788877655 67888752 3567888887 3 221 112222 2221 2356789999999999999999 Q ss_pred cCCce Q FBpp0290331 558 NKGWQ 562 (813) Q Consensus 558 ~~Gw~ 562 (813) ...+. T Consensus 109 ~~~~~ 113 (134) T 2wnv_A 109 DPKKG 113 (134) T ss_dssp EEEEE T ss_pred ECCCC Confidence 75433
No 16
>1pwb_A SP-D, PSP-D, pulmonary surfactant-associated protein D; collectin, C-type lectin, alpha-helical coiled coil, carbohydrate recognition domain; HET: GLC; 1.40A {Homo sapiens} SCOP: d.169.1.1 h.1.1.1 PDB: 1pw9_A* 3ikn_A* 3ikp_A* 3ikq_A* 3ikr_A* 4e52_A* 2rie_A* 2ggx_A* 2ggu_A* 2ork_A* 2orj_A* 2ria_A* 2rib_A* 2ric_A* 2rid_A* 2os9_A* 3dbz_A 3g81_A* 3g83_A* 1b08_A ... Probab=75.75 E-value=0.67 Score=44.75 Aligned_cols=12 Identities=25% Similarity=0.952 Sum_probs=9.3 Q ss_pred ccccccCceEEE Q FBpp0290331 758 RQSCDSKLIILC 769 (813) Q Consensus 758 ~~~C~~~~~vlC 769 (813) ..+|+.++..+| T Consensus 164 d~~C~~~~~~iC 175 (177) T 1pwb_A 164 DRACGEKRLVVC 175 (177) T ss_dssp EECTTSEEEEEE T ss_pred CccCCCCeeEEE Confidence 367888888888
No 17
>1rj8_A Ectodysplasin-A isoform EDA-A2; TNF domain, jelly roll, splice variant, trimer, hormone-GROW complex; 2.23A {Homo sapiens} SCOP: b.22.1.1 PDB: 1rj7_A Probab=69.43 E-value=1.1 Score=44.05 Aligned_cols=68 Identities=6% Similarity=0.051 Sum_probs=43.1 Q ss_pred CCCCCCCCccccCCCCCCCCcccc----C--CCCCceeeec-CeeeeehhHhhh---cccCCCCCCceEEeccCceEEEE Q FBpp0290331 487 QPGHSHKHEETLGLVDGEEPYFSA----S--SSNMNMKIVP-GAVTFQNIDEMT---KKSALNPPGTLAYITEEEALLVR 556 (813) Q Consensus 487 ~~G~~~~~~~~~~~~~~~~P~~s~----s--~s~~~v~lV~-Gv~~~~t~d~m~---~~s~~sseGtlayl~~~~el~vr 556 (813) ..|++.|..+ +.|||.+ . ...+++.|++ +...++.++.+. ...+..+.+.|++|..+|+|||+ T Consensus 64 ~tG~f~~~~~-------G~Y~fy~qv~f~~~~~~~~~~l~~n~~~ll~~~~~~~~~~~~~~~~s~~~vl~L~~GD~V~v~ 136 (164) T 1rj8_A 64 RSGELEVLVD-------GTYFIYSQVYYINFTDFASYEVVVDEKPFLQCTRSIETGKTNYNTCYTAGVCLLKARQKIAVK 136 (164) T ss_dssp TTCCEEECSC-------EEEEEEEEEEEEEESSCEEEEEEETTEEEEEEEEEECCSSCEEEEEEEEEEEEECTTCEEEEE T ss_pred cCCEEEeCCC-------EEEEEEEEEEEccccCCceEEEEeCCceeEEEeecccCCCCCcceEEeeeEEEeCCCCEEEEE Confidence 3566665444 5667652 1 2345667777 554454444332 12356788999999999999999 Q ss_pred EcCCc Q FBpp0290331 557 VNKGW 561 (813) Q Consensus 557 v~~Gw 561 (813) |.+.- T Consensus 137 v~~~~ 141 (164) T 1rj8_A 137 MVHAD 141 (164) T ss_dssp ECSCS T ss_pred ecCCC Confidence 98654
No 18
>2ka3_A Emilin-1; C1Q-like domain, homotrimeric protein complex, beta-sandwich, structural protein, cell adhesion, extracellular matrix; NMR {Homo sapiens} SCOP: b.22.1.0 PDB: 2oii_A Probab=68.78 E-value=1.4 Score=43.32 Aligned_cols=77 Identities=12% Similarity=0.152 Sum_probs=44.9 Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCccccCCCCCCCCccccCC-----CCCceeeec-Ceeeeeh----hH--hhh------ Q FBpp0290331 472 FFGDASYYGRPEPPRQPGHSHKHEETLGLVDGEEPYFSASS-----SNMNMKIVP-GAVTFQN----ID--EMT------ 533 (813) Q Consensus 472 ~~G~~g~~G~pgppg~~G~~~~~~~~~~~~~~~~P~~s~s~-----s~~~v~lV~-Gv~~~~t----~d--~m~------ 533 (813) +.+..+.|.. .+|.|.|..+ +.|||+... ..+.+.|++ +..+... ++ .+. T Consensus 39 ~~N~G~~Yn~-----~TG~FTapv~-------GvY~Fs~~~~~~~~~~~~~~L~~N~~~v~~~~~~~~~~~~~~~~~~~~ 106 (162) T 2ka3_A 39 LLNDGGYYDP-----ETGVFTAPLA-------GRYLLSAVLTGHRHEKVEAVLSRSNQGVARVDSGGYEPEGLENKPVAE 106 (162) T ss_dssp EEESSCCEET-----TTTEEECCCC-------EEEEEEECCCCCTTCCEEEEECTTTSCCCSSEEEC------------- T ss_pred EECCCCCcCC-----CCCeEeceec-------cEEEEEEEEEecCCCEEEEEEEECCeEEEEEeeccccccccccccccc Confidence 3344455553 5788888665 778888532 234455776 4332221 11 100 Q ss_pred c--cc-CCCCCCceEEeccCceEEEEEcCC Q FBpp0290331 534 K--KS-ALNPPGTLAYITEEEALLVRVNKG 560 (813) Q Consensus 534 ~--~s-~~sseGtlayl~~~~el~vrv~~G 560 (813) . .+ +.++..+++.|..+|+||||+..| T Consensus 107 ~q~~sg~~~S~s~vL~L~~GD~Vwl~l~~g 136 (162) T 2ka3_A 107 SQPSPGTLGVFSLILPLQAGDTVCVDLVMG 136 (162) T ss_dssp ------CCCCCSSCCCCCTTCEEEEECCSC T ss_pred cccccCceeeEEEEEEECCCCEEEEEEcCC Confidence 0 00 245668999999999999999754
No 19
>4dou_A Adiponectin; single-chain globular domain, calcium binding, C1Q-like DOMA growth factor, serum, hormone; 2.00A {Homo sapiens} SCOP: b.22.1.0 b.22.1.0 b.22.1.0 PDB: 1c3h_A 1c28_A Probab=66.62 E-value=0.92 Score=51.77 Aligned_cols=75 Identities=11% Similarity=0.201 Sum_probs=53.3 Q ss_pred CCCCCCCCCCCCCCCCCCCCCCccccCCCCCCCCccccC----CCCCceeeec-CeeeeehhHhhhccc-CCCCCCceEE Q FBpp0290331 473 FGDASYYGRPEPPRQPGHSHKHEETLGLVDGEEPYFSAS----SSNMNMKIVP-GAVTFQNIDEMTKKS-ALNPPGTLAY 546 (813) Q Consensus 473 ~G~~g~~G~pgppg~~G~~~~~~~~~~~~~~~~P~~s~s----~s~~~v~lV~-Gv~~~~t~d~m~~~s-~~sseGtlay 546 (813) .+..+.+.. .+|.|.|..+ +.|+|+.. ...+++.||+ +..+..++++..... +.++..+++. T Consensus 51 ~N~g~~yn~-----~TG~Ftap~~-------G~Y~Fs~~~~~~~~~~~v~L~~Ng~~i~~~~~~~~~~~~~~~S~s~iL~ 118 (442) T 4dou_A 51 YNQQNHYDG-----STGKFHCNIP-------GLYYFAYHITVYMKDVKVSLFKKDKAMLFTYDQYQENNVDQASGSVLLH 118 (442) T ss_dssp ECTTCCEET-----TTTEEECCSC-------EEEEEEEEEEEEEEEEEEEEEETTEEEEEEEECCBTTBCEEEEEEEEEE T ss_pred ECCCCCcCC-----CCCeEeCCCC-------eEEEEEEEEEecCCcEEEEEEECCEEEEEEecccCCCCcceeeeEEEEE Confidence 344555553 5788887655 67888753 3467888998 666666666544332 5778899999 Q ss_pred eccCceEEEEEcC Q FBpp0290331 547 ITEEEALLVRVNK 559 (813) Q Consensus 547 l~~~~el~vrv~~ 559 (813) |..+|+||||+.. T Consensus 119 L~~GD~Vwv~~~~ 131 (442) T 4dou_A 119 LEVGDQVWLQVYG 131 (442) T ss_dssp ECTTCEEEEEEC- T ss_pred ccCCCEEEEEeec Confidence 9999999999974
No 20
>2dpr_A Conantokin-T, CON-T; conantoxin, nmdar antagonist, GLA-containing, metal B protein; HET: CGU; 1.70A {Conus tulipa} PDB: 1ont_A* Probab=64.51 E-value=3.6 Score=26.10 Aligned_cols=12 Identities=50% Similarity=0.717 Sum_probs=10.8 Q ss_pred hHHHHHHHHHhh Q FBpp0290331 801 ADEYAAHLENLL 812 (813) Q Consensus 801 ~~~~~~~~~~~~ 812 (813) |+||++.||+|. T Consensus 2 eeeyqemlenlr 13 (21) T 2dpr_A 2 EEEYQEMLENLR 13 (26) T ss_dssp CHHHHHHHHHHH T ss_pred cHHHHHHHHHHH Confidence 689999999985
No 21
>1buu_A Protein (mannose-binding protein A); lectin, HOST defense, metalloprotein, sugar binding protein; 1.90A {Rattus norvegicus} SCOP: d.169.1.1 h.1.1.1 Probab=39.17 E-value=7.7 Score=37.45 Aligned_cols=12 Identities=25% Similarity=0.656 Sum_probs=10.0 Q ss_pred ccccccCceEEE Q FBpp0290331 758 RQSCDSKLIILC 769 (813) Q Consensus 758 ~~~C~~~~~vlC 769 (813) ..+|+.++..+| T Consensus 153 d~~C~~~~~~IC 164 (168) T 1buu_A 153 DISCQASHTAVC 164 (168) T ss_dssp EECTTSCEEEEE T ss_pred CcCCCCCeeEEE Confidence 358999998898
No 22
>1o91_A Collagen alpha 1(VIII) chain; C1Q_LIKE_domain, extracellular matrix, adhesion, connective tissue, repeat, structural protein; HET: CPS; 1.9A {Mus musculus} SCOP: b.22.1.1 Probab=36.72 E-value=8.8 Score=38.22 Aligned_cols=55 Identities=27% Similarity=0.386 Sum_probs=27.4 Q ss_pred CcEEecCccccccCCCCcccCCCc-eeccCCCccCCCCCCCcceEEeeCCCCcccccCccCC Q FBpp0290331 672 GDVLFNSWKGIFNGQGGFFSQAPR-IYSFSGKNVMTDSTWPMKMVWHGSLPNGERSMDTYCD 732 (813) Q Consensus 672 g~vl~~~~~~l~~~~~~~~~~~~~-i~~f~~~~~l~~~~~~~k~vW~Gs~~~g~~~~~~~C~ 732 (813) +.|+.|.-... +...++|+...+ +|.|+=+-.. ..+.+|..+..++......+|+ T Consensus 70 d~v~~N~G~~y-n~~TG~FTapv~G~Y~Fs~~~~~-----~~~~~~v~L~~Ng~~~~~~~~~ 125 (178) T 1o91_A 70 DKLLYNGRQNY-NPQTGIFTCEVPGVYYFAYHVHC-----KGGNVWVALFKNNEPMMYTYDE 125 (178) T ss_dssp CEEEEEETTCE-ETTTTEEECCSCEEEEEEEEEEE-----EEEEEEEEEEETTEEEEEEEEC T ss_pred CEEEEcCCCCc-cCCCCeEEeeCCeEEEEEEEEEe-----CCceEEEEEEECCEEEEEEEec Confidence 45665544444 333346665555 7766322111 1245666666666655444443
No 23
>2ljw_A ALR2454 protein; novel fold, structural genomics, northeast structural genomi consortium, NESG, PSI-biology, protein structure initiative function; NMR {Nostoc SP} Probab=24.31 E-value=40 Score=31.20 Aligned_cols=14 Identities=29% Similarity=0.584 Sum_probs=12.5 Q ss_pred cChHHHHHHHHHhh Q FBpp0290331 799 KTADEYAAHLENLL 812 (813) Q Consensus 799 ~~~~~~~~~~~~~~ 812 (813) +||.||.+||+.+. T Consensus 45 lsE~eY~~hL~~Va 58 (110) T 2ljw_A 45 MNETEYQEHLDSVA 58 (110) T ss_dssp SCHHHHHHHHHHHH T ss_pred CCHHHHHHHHHHHH Confidence 79999999999874