Query FBpp0290333 type=protein; loc=3L:join(7038101..7038151,7041018..7041131,7043466..7043720,7044926..7045003,7045109..7045355,7046334..7046488,7046586..7046678,7048842..7048964,7050565..7050695,7051242..7051421,7051486..7051722,7051977..7052052); ID=FBpp0290333; name=Mp-PJ; parent=FBgn0260660,FBtr0301111; dbxref=REFSEQ:NP_001163361,GB_protein:ACZ94632,FlyBase:FBpp0290333,FlyBase_Annotation_IDs:CG42543-PJ,FlyMine:FBpp0290333,modMine:FBpp0290333; MD5=de56d33fac9dbdccf91a29c01f9c2c0e; length=579; release=r6.06; species=Dmel; Match_columns 579 No_of_seqs 502 out of 2325 Neff 5.9 Searched_HMMs 35384 No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 1dy2_A Collagen alpha1(XV) cha 100.0 3.2E-63 9.2E-68 468.5 13.0 173 367-543 4-177 (180) 2 1koe_A Endostatin; angiogenesi 100.0 1.1E-61 3.2E-66 460.8 10.9 170 370-539 1-171 (172) 3 3hsh_A Endostatin, collagen al 99.6 1.5E-15 4.3E-20 118.7 4.8 53 287-339 3-55 (56) 4 3n3f_A Collagen alpha-1(XV) ch 99.6 2.5E-15 7E-20 116.8 5.5 52 288-339 2-53 (54) 5 1wck_A BCLA protein; collagen- 98.6 6.9E-09 1.9E-13 102.9 -0.9 11 319-329 149-159 (220) 6 1wck_A BCLA protein; collagen- 98.5 1.8E-08 5.1E-13 99.9 -0.1 6 305-310 129-134 (220) 7 1pwb_A SP-D, PSP-D, pulmonary 82.3 0.32 9E-06 44.8 0.0 12 524-535 164-175 (177) 8 1pwb_A SP-D, PSP-D, pulmonary 81.1 0.37 1.1E-05 44.3 0.0 7 392-398 79-85 (177) 9 4ae2_A Procollagen III, collag 77.9 0.53 1.5E-05 47.7 -0.1 46 405-452 142-192 (256) 10 2dpr_A Conantokin-T, CON-T; co 71.1 2.2 6.2E-05 26.1 1.4 12 567-578 2-13 (21) 11 1o91_A Collagen alpha 1(VIII) 53.5 6.3 0.00018 37.5 1.9 38 294-331 79-120 (178) 12 2ljw_A ALR2454 protein; novel 31.6 25 0.0007 31.2 2.0 14 565-578 45-58 (110) 13 1buu_A Protein (mannose-bindin 24.3 19 0.00055 32.9 0.0 12 524-535 153-164 (168) 14 1buu_A Protein (mannose-bindin 23.3 21 0.00059 32.7 0.0 7 480-486 101-107 (168)No 1>1dy2_A Collagen alpha1(XV) chain; angiogenesis inhibitor; 2.0A {Mus musculus} SCOP: d.169.1.5 Probab=100.00 E-value=3.2e-63 Score=468.50 Aligned_cols=173 Identities=51% Similarity=0.974 Sum_probs=164.3 Q ss_pred CCCCCceEEEecCCCCCCCCCCccchhHHHHHHhhhcCCccccceeeeecccccceeeccCCC-CCceecCCCcEEecCc Q FBpp0290333 367 LLNTPTLRVAALNEPSTGDLQGIRGADFACYRQGRRAGLLGTFKAFLSSRVQNLDTIVRPADR-DLPVVNTRGDVLFNSW 445 (579) Q Consensus 367 ~~~~~~l~l~a~n~~~~G~l~Gi~GAD~~C~~~A~~~g~~~tfrA~LSs~~q~~~~~V~~~dr-~~p~~n~~g~vlf~~~ 445 (579) ...+|+|||||||+|++|||+ ||++||+||+++|+.+|||||||+++||+.++|+++|| .+||||+||+|||++| T Consensus 4 ~~~~~~L~lvALN~P~sG~m~----AD~~C~~qAraaGl~gTfRAfLSs~~qdl~~iV~~~DR~~~PivNlkGevLf~sw 79 (180) T 1dy2_A 4 AYERPVLHLVALNTPVAGDIR----ADFQCFQQARAAGLLSTFRAFLSSHLQDLSTVVRKAERFGLPIVNLKGQVLFNNW 79 (180) T ss_dssp ---CCCEEEEECSSCBCSBCC----HHHHHHHHHHHTTCCSCEEESSCBTTBCGGGSSCGGGSSSCCEECTTSCEEESCS T ss_pred cCCCccEEEEEcCCCCCCCch----HHHHHHHHHHHhCCCCceEEEeecccccCccccCHhHcCCCCeEcCCCCEEecCH Confidence 456899999999999999999 99999999999999999999999999999999999999 6999999999999999 Q ss_pred cccccCCCCCccCCCceeeccCCcccCCCCCCcceEeecCCCCCccccCCCCCCcccCCCCceeccccCCCCcccccccc Q FBpp0290333 446 KGIFNGQGGFFSQAPRIYSFSGKNVMTDSTWPMKMVWHGSLPNGERSMDTYCDAWHSGDHLKGSFASNLDGHKLLEQKRQ 525 (579) Q Consensus 446 ~~l~~~~~~~~~~~~~i~~f~~~dvl~d~~~p~k~vW~Gs~~~g~~~~~~~C~~W~s~~~~~~G~as~~~~~~l~~~~~~ 525 (579) ++||++.+++|+.+++||+||+||||+|++||+|+|||||++||++.+++||++|||++.+++|+||+|.+++||.|+.+ T Consensus 80 ~~lf~g~~~~l~~~~~Iysfdg~dVl~d~~wP~K~vWhGS~~~G~r~~d~~C~~W~s~~~~~~G~Assl~~g~ll~q~~~ 159 (180) T 1dy2_A 80 DSIFSGDGGQFNTHIPIYSFDGRDVMTDPSWPQKVVWHGSNPHGVRLVDKYCEAWRTTDMAVTGFASPLSTGKILDQKAY 159 (180) T ss_dssp GGGGSSSCCBCCTTSCCBBTTSCBTTTCTTCSSCEEECCBCTTSCBCTTSBHHHHBCCCTTCEEEEEEGGGTBSSCCEEE T ss_pred HHHhCCCCCccCCCCCeeccCCcccccCCCccccccccCCCCCCCCcccccccCCccCCCCceEeeeecCCCCcccCccc Confidence 99999998899999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred ccCCCceEEEEecccHHH Q FBpp0290333 526 SCDSKLIILCVEALSQDR 543 (579) Q Consensus 526 ~C~~~~~vlCvE~~~~~~ 543 (579) +|+++||||||||+.... T Consensus 160 sC~~~~ivLCIEn~~~~~ 177 (180) T 1dy2_A 160 SCANRLIVLCIENSFMTD 177 (180) T ss_dssp ETTSCBBCEEEECCC--- T ss_pred CCCCceEEEEEEcccccc Confidence 999999999999986544No 2>1koe_A Endostatin; angiogenesis inhibitor, collagen XVIII, non-collageneous domain, heparin-binding domain; 1.50A {Mus musculus} SCOP: d.169.1.5 PDB: 1dy0_A 1dy1_A 1bnl_A Probab=100.00 E-value=1.1e-61 Score=460.82 Aligned_cols=170 Identities=48% Similarity=0.921 Sum_probs=166.2 Q ss_pred CCceEEEecCCCCCCCCCCccchhHHHHHHhhhcCCccccceeeeecccccceeeccCCC-CCceecCCCcEEecCcccc Q FBpp0290333 370 TPTLRVAALNEPSTGDLQGIRGADFACYRQGRRAGLLGTFKAFLSSRVQNLDTIVRPADR-DLPVVNTRGDVLFNSWKGI 448 (579) Q Consensus 370 ~~~l~l~a~n~~~~G~l~Gi~GAD~~C~~~A~~~g~~~tfrA~LSs~~q~~~~~V~~~dr-~~p~~n~~g~vlf~~~~~l 448 (579) +|+|||||||+||+|||+||+|||++||+||+++|+.+|||||||+++|++.++|++.|| .+||||+||+|||++|++| T Consensus 1 ~~~l~lvaln~p~~GnlgGi~GAD~~C~~~A~aaGl~gtfRAfLSs~~q~~~~iV~~~dr~~~P~vN~kg~vl~~~~~~l 80 (172) T 1koe_A 1 QPVLHLVALNTPLSGGMRGIRGADFQCFQQARAVGLSGTFRAFLSSRLQDLYSIVRRADRGSVPIVNLKDEVLSPSWDSL 80 (172) T ss_dssp CCCEEEEECSSCBCSCSSHHHHHHHHHHHHHHHTTCCSCEEESCCBTTBCGGGGSCGGGTTTCCEECTTCCEEESCHHHH T ss_pred CCceEEEEeCCCcCCCcccchhHHHHHHHHHHhcCCCCeeEEEEEcccCCccceeccccccCCCeECCcCcEEeCCHHHh Confidence 478999999999999999999999999999999999999999999999999999999999 6999999999999999999 Q ss_pred ccCCCCCccCCCceeeccCCcccCCCCCCcceEeecCCCCCccccCCCCCCcccCCCCceeccccCCCCccccccccccC Q FBpp0290333 449 FNGQGGFFSQAPRIYSFSGKNVMTDSTWPMKMVWHGSLPNGERSMDTYCDAWHSGDHLKGSFASNLDGHKLLEQKRQSCD 528 (579) Q Consensus 449 ~~~~~~~~~~~~~i~~f~~~dvl~d~~~p~k~vW~Gs~~~g~~~~~~~C~~W~s~~~~~~G~as~~~~~~l~~~~~~~C~ 528 (579) |++.+++|++++.||+||+||||+|++||+|+|||||++||++..++||++|||++.+++|+||+|++++||+|+.++|| T Consensus 81 ~~~~~~~~~~~~~i~sfn~~dvl~d~~wp~k~vWtGs~~~G~~~~~~~C~~Wts~~~~~~G~assl~~~~ll~q~~~sCs 160 (172) T 1koe_A 81 FSGSQGQLQPGARIFSFDGRDVLRHPAWPQKSVWHGSDPSGRRLMESYCETWRTETTGATGQASSLLSGRLLEQKAASCH 160 (172) T ss_dssp TSSSCSBCCTTCCCBBTTSCBTTTCTTSSSCEEECCBCTTSCBCTTSBHHHHTCCCTTCEEEEEEGGGTBSCCCEEEETT T ss_pred cCCCCccccCCCceEccCCCccccCCCCccceeEECCCCCCcCcCCCcccCCcCCCCCceEeeccCCCCCcccCcCCCcC Confidence 99998899999999999999999999999999999999999998999999999999999999999999999999999999 Q ss_pred CCceEEEEecc Q FBpp0290333 529 SKLIILCVEAL 539 (579) Q Consensus 529 ~~~~vlCvE~~ 539 (579) ++|+||||||+ T Consensus 161 ~~~~vLCIE~~ 171 (172) T 1koe_A 161 NSYIVLCIENS 171 (172) T ss_dssp SCBBCEEEECC T ss_pred CCcEEEEEeec Confidence 99999999996No 3>3hsh_A Endostatin, collagen alpha-1(XVIII) chain; extracellular matrix, basement membrane, collagen trimerization domain, folding, association; 1.80A {Homo sapiens} PDB: 3hon_A Probab=99.57 E-value=1.5e-15 Score=118.70 Aligned_cols=53 Identities=26% Similarity=0.477 Sum_probs=51.0 Q ss_pred ceEEeeccHHHHhhccCCCCCCcEEEEccCccEEEEEcCCceeeeccccCcCC Q FBpp0290333 287 PGAVTFQNIDEMTKKSALNPPGTLAYITEEEALLVRVNKGWQYIALGTLVPIA 339 (579) Q Consensus 287 ~g~~~~~~~d~m~~~~~~~~~GtlaYv~~~~~l~Vrv~~G~~~i~lg~~~p~~ 339 (579) .|+++|+|+++|+++++..++|||+|++|+++|||||++|||+|+|+.++|++ T Consensus 3 ~gv~~~~t~~~ml~~~~~~~eGtL~yv~d~~eLyiRVr~Gwr~V~Lg~~~pip 55 (56) T 3hsh_A 3 SGVRLWATRQAMLGQVHEVPEGWLIFVAEQEELYVRVQNGFRKVQLEARTPLP 55 (56) T ss_dssp CCEEEESSHHHHHHHGGGSCTTCEEEETTTTEEEEEETTEEEEECEEEEEECC T ss_pred CcEEEEecHHHHHhhCccCCCeEEEEEEecceEEEEEcCcEEEEeecccccCC Confidence 47899999999999999999999999999999999999999999999999886No 4>3n3f_A Collagen alpha-1(XV) chain; extracellular matrix, basement membrane, collagen trimerization domain, folding, association, chain selection helix; 2.00A {Homo sapiens} Probab=99.57 E-value=2.5e-15 Score=116.75 Aligned_cols=52 Identities=35% Similarity=0.742 Sum_probs=49.7 Q ss_pred eEEeeccHHHHhhccCCCCCCcEEEEccCccEEEEEcCCceeeeccccCcCC Q FBpp0290333 288 GAVTFQNIDEMTKKSALNPPGTLAYITEEEALLVRVNKGWQYIALGTLVPIA 339 (579) Q Consensus 288 g~~~~~~~d~m~~~~~~~~~GtlaYv~~~~~l~Vrv~~G~~~i~lg~~~p~~ 339 (579) ++++|+|+++|+++++..++|||+|++|+++|||||++|||+|+|+.++|++ T Consensus 2 ~v~~~~t~~~M~~~~~~~~eGtL~yv~d~~eLyiRVr~Gwr~V~Lg~~ip~p 53 (54) T 3n3f_A 2 LVTAFSNMDDMLQKAHLVIEGTFIYLRDSTEFFIRVRDGWKKLQLGELIPIP 53 (54) T ss_dssp CEEEESSHHHHHTTGGGSCTTEEEEETTTTEEEEEETTEEEECCCCCCCCCC T ss_pred CcEEEecHHHHHhhCccCCCeEEEEEEecceEEEEEcCceeeeeecccccCC Confidence 4789999999999999999999999999999999999999999999999874No 5>1wck_A BCLA protein; collagen-like protein, bacterial surface antigen, jelly- roll topology, structural protein; 1.36A {Bacillus anthracis} Probab=98.56 E-value=6.9e-09 Score=102.88 Aligned_cols=11 Identities=0% Similarity=-0.399 Sum_probs=5.2 Q ss_pred EEEEEcCCcee Q FBpp0290333 319 LLVRVNKGWQY 329 (579) Q Consensus 319 l~Vrv~~G~~~ 329 (579) +++++..+-.. T Consensus 149 ~~~~L~~NG~~ 159 (220) T 1wck_A 149 GGLTIQVNGVP 159 (220) T ss_dssp CEEEEEETTEE T ss_pred eEEEEEECCEE Confidence 45555544333No 6>1wck_A BCLA protein; collagen-like protein, bacterial surface antigen, jelly- roll topology, structural protein; 1.36A {Bacillus anthracis} Probab=98.48 E-value=1.8e-08 Score=99.87 Aligned_cols=6 Identities=17% Similarity=0.274 Sum_probs=2.4 Q ss_pred CCCCcE Q FBpp0290333 305 NPPGTL 310 (579) Q Consensus 305 ~~~Gtl 310 (579) ...|.+ T Consensus 129 ~~~G~Y 134 (220) T 1wck_A 129 SETGFY 134 (220) T ss_dssp CSCEEE T ss_pred ccCceE Confidence 333444No 7>1pwb_A SP-D, PSP-D, pulmonary surfactant-associated protein D; collectin, C-type lectin, alpha-helical coiled coil, carbohydrate recognition domain; HET: GLC; 1.40A {Homo sapiens} SCOP: d.169.1.1 h.1.1.1 PDB: 1pw9_A* 3ikn_A* 3ikp_A* 3ikq_A* 3ikr_A* 4e52_A* 2rie_A* 2ggx_A* 2ggu_A* 2ork_A* 2orj_A* 2ria_A* 2rib_A* 2ric_A* 2rid_A* 2os9_A* 3dbz_A 3g81_A* 3g83_A* 1b08_A ... Probab=82.29 E-value=0.32 Score=44.77 Aligned_cols=12 Identities=25% Similarity=0.952 Sum_probs=9.5 Q ss_pred ccccCCCceEEE Q FBpp0290333 524 RQSCDSKLIILC 535 (579) Q Consensus 524 ~~~C~~~~~vlC 535 (579) ..+|+.++..+| T Consensus 164 d~~C~~~~~~iC 175 (177) T 1pwb_A 164 DRACGEKRLVVC 175 (177) T ss_dssp EECTTSEEEEEE T ss_pred CccCCCCeeEEE Confidence 367888888888No 8>1pwb_A SP-D, PSP-D, pulmonary surfactant-associated protein D; collectin, C-type lectin, alpha-helical coiled coil, carbohydrate recognition domain; HET: GLC; 1.40A {Homo sapiens} SCOP: d.169.1.1 h.1.1.1 PDB: 1pw9_A* 3ikn_A* 3ikp_A* 3ikq_A* 3ikr_A* 4e52_A* 2rie_A* 2ggx_A* 2ggu_A* 2ork_A* 2orj_A* 2ria_A* 2rib_A* 2ric_A* 2rid_A* 2os9_A* 3dbz_A 3g81_A* 3g83_A* 1b08_A ... Probab=81.12 E-value=0.37 Score=44.31 Aligned_cols=7 Identities=29% Similarity=0.724 Sum_probs=3.5 Q ss_pred hhHHHHH Q FBpp0290333 392 ADFACYR 398 (579) Q Consensus 392 AD~~C~~ 398 (579) |..+|.. T Consensus 79 A~~~C~~ 85 (177) T 1pwb_A 79 AQLLCTQ 85 (177) T ss_dssp HHHHHHH T ss_pred HHHHHHH Confidence 4555543No 9>4ae2_A Procollagen III, collagen alpha-1(III) chain; structural protein, fibrillar collagen, extracellular matrix fibrosis; 1.68A {Homo sapiens} PDB: 4aej_A* 4ak3_A Probab=77.87 E-value=0.53 Score=47.71 Aligned_cols=46 Identities=17% Similarity=0.057 Sum_probs=35.9 Q ss_pred Cccccceeeeecc-cccce----eeccCCCCCceecCCCcEEecCccccccCC Q FBpp0290333 405 LLGTFKAFLSSRV-QNLDT----IVRPADRDLPVVNTRGDVLFNSWKGIFNGQ 452 (579) Q Consensus 405 ~~~tfrA~LSs~~-q~~~~----~V~~~dr~~p~~n~~g~vlf~~~~~l~~~~ 452 (579) .|++|+++||+++ |+|+| ++.|.|.. ..|++.++.|..||+.+-.. T Consensus 142 ~Ql~fL~llS~~c~Q~itY~C~nS~~~~d~~--~g~~~~a~~~~g~n~~~~~~ 192 (256) T 4ae2_A 142 VQLAFLRLLSSRASQQITYHCKNSIAYMDQA--SGNVKKALKLMGSNEGEFKA 192 (256) T ss_dssp HHHHHHHHHCSCEEEEEEEEEESCCSSCBTT--TTBCTTCCEEECSSSCEEBS T ss_pred HHHHHHHhhccceeEEEEEEEecceecccCC--CCCccceEEEEeCCCcEEee Confidence 6899999999999 99999 78887763 35567777888877665443No 10>2dpr_A Conantokin-T, CON-T; conantoxin, nmdar antagonist, GLA-containing, metal B protein; HET: CGU; 1.70A {Conus tulipa} PDB: 1ont_A* Probab=71.07 E-value=2.2 Score=26.07 Aligned_cols=12 Identities=50% Similarity=0.717 Sum_probs=10.8 Q ss_pred hHHHHHHHHhhh Q FBpp0290333 567 ADEYAAHLENLL 578 (579) Q Consensus 567 ~~~~~~~~~~~~ 578 (579) |+||++.||+|. T Consensus 2 eeeyqemlenlr 13 (21) T 2dpr_A 2 EEEYQEMLENLR 13 (26) T ss_dssp CHHHHHHHHHHH T ss_pred cHHHHHHHHHHH Confidence 689999999985No 11>1o91_A Collagen alpha 1(VIII) chain; C1Q_LIKE_domain, extracellular matrix, adhesion, connective tissue, repeat, structural protein; HET: CPS; 1.9A {Mus musculus} SCOP: b.22.1.1 Probab=53.53 E-value=6.3 Score=37.51 Aligned_cols=38 Identities=16% Similarity=0.135 Sum_probs=25.1 Q ss_pred cHHHHhhccCCCCCCcEEEEc----cCccEEEEEcCCceeee Q FBpp0290333 294 NIDEMTKKSALNPPGTLAYIT----EEEALLVRVNKGWQYIA 331 (579) Q Consensus 294 ~~d~m~~~~~~~~~GtlaYv~----~~~~l~Vrv~~G~~~i~ 331 (579) .++....++.+...|++.|.- +...++|++.++-+.|. T Consensus 79 ~yn~~TG~FTapv~G~Y~Fs~~~~~~~~~~~v~L~~Ng~~~~ 120 (178) T 1o91_A 79 NYNPQTGIFTCEVPGVYYFAYHVHCKGGNVWVALFKNNEPMM 120 (178) T ss_dssp CEETTTTEEECCSCEEEEEEEEEEEEEEEEEEEEEETTEEEE T ss_pred CccCCCCeEEeeCCeEEEEEEEEEeCCceEEEEEEECCEEEE Confidence 355556777888899886652 23467777776666554No 12>2ljw_A ALR2454 protein; novel fold, structural genomics, northeast structural genomi consortium, NESG, PSI-biology, protein structure initiative function; NMR {Nostoc SP} Probab=31.64 E-value=25 Score=31.19 Aligned_cols=14 Identities=29% Similarity=0.584 Sum_probs=12.5 Q ss_pred cChHHHHHHHHhhh Q FBpp0290333 565 KTADEYAAHLENLL 578 (579) Q Consensus 565 ~~~~~~~~~~~~~~ 578 (579) +||.||.+||+.+. T Consensus 45 lsE~eY~~hL~~Va 58 (110) T 2ljw_A 45 MNETEYQEHLDSVA 58 (110) T ss_dssp SCHHHHHHHHHHHH T ss_pred CCHHHHHHHHHHHH Confidence 79999999999864No 13>1buu_A Protein (mannose-binding protein A); lectin, HOST defense, metalloprotein, sugar binding protein; 1.90A {Rattus norvegicus} SCOP: d.169.1.1 h.1.1.1 Probab=24.26 E-value=19 Score=32.86 Aligned_cols=12 Identities=25% Similarity=0.656 Sum_probs=10.2 Q ss_pred ccccCCCceEEE Q FBpp0290333 524 RQSCDSKLIILC 535 (579) Q Consensus 524 ~~~C~~~~~vlC 535 (579) ..+|+.++..+| T Consensus 153 d~~C~~~~~~IC 164 (168) T 1buu_A 153 DISCQASHTAVC 164 (168) T ss_dssp EECTTSCEEEEE T ss_pred CcCCCCCeeEEE Confidence 368999999999No 14>1buu_A Protein (mannose-binding protein A); lectin, HOST defense, metalloprotein, sugar binding protein; 1.90A {Rattus norvegicus} SCOP: d.169.1.1 h.1.1.1 Probab=23.31 E-value=21 Score=32.66 Aligned_cols=7 Identities=14% Similarity=0.188 Sum_probs=3.4 Q ss_pred eEeecCC Q FBpp0290333 480 MVWHGSL 486 (579) Q Consensus 480 ~vW~Gs~ 486 (579) .+|.|++ T Consensus 101 ~~WIGl~ 107 (168) T 1buu_A 101 SAFLGIT 107 (168) T ss_dssp CEECSEE T ss_pred CEEEecc Confidence 4555553