Query FBpp0290335 type=protein; loc=3L:join(7012190..7012289,7012739..7013277,7033869..7033964,7034503..7034538,7034635..7034703,7035214..7035315,7035744..7035881,7038005..7038151,7041018..7041131,7043466..7043720,7044926..7045003,7045109..7045355,7046334..7046488,7046586..7046678,7048842..7048964,7050565..7050695,7051242..7051421,7051486..7051722,7051977..7052052); ID=FBpp0290335; name=Mp-PL; parent=FBgn0260660,FBtr0301113; dbxref=REFSEQ:NP_001163363,GB_protein:ACZ94634,FlyBase:FBpp0290335,FlyBase_Annotation_IDs:CG42543-PL,FlyMine:FBpp0290335,modMine:FBpp0290335; MD5=00c3e475bde6a646aff88c7d387b1783; length=971; release=r6.06; species=Dmel; Match_columns 971 No_of_seqs 754 out of 2675 Neff 6.3 Searched_HMMs 35384 No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 1dy2_A Collagen alpha1(XV) cha 100.0 3.5E-63 9.8E-68 492.8 12.5 174 757-934 2-176 (180) 2 1koe_A Endostatin; angiogenesi 100.0 2.1E-62 5.9E-67 492.3 10.7 170 762-931 1-171 (172) 3 2uur_A Collagen alpha-1(IX) ch 100.0 2.6E-33 7.3E-38 301.6 18.6 195 34-237 29-234 (245) 4 2erf_A Thrombospondin-1; TSP-1 100.0 1.6E-31 4.4E-36 281.2 15.9 194 34-234 2-209 (209) 5 1za4_A Thrombospondin 1; TSP-1 100.0 3.8E-30 1.1E-34 277.9 17.2 195 34-237 12-222 (251) 6 3hqv_A Collagen alpha-1(I) cha 100.0 1.2E-27 3.4E-32 299.4 37.9 31 617-647 998-1028(1056) 7 3hqv_B Collagen alpha-2(I) cha 100.0 2.6E-27 7.2E-32 295.8 37.4 6 640-645 1016-1021(1028) 8 3hsh_A Endostatin, collagen al 99.6 1.3E-16 3.8E-21 130.9 4.9 52 680-731 4-55 (56) 9 3n3f_A Collagen alpha-1(XV) ch 99.6 2.1E-16 6E-21 129.0 5.7 52 680-731 2-53 (54) 10 3sh4_A LG3 peptide; actin disa 98.8 9.8E-08 2.8E-12 98.1 16.5 149 63-223 6-167 (195) 11 3v64_A Low-density lipoprotein 98.8 1.5E-07 4.3E-12 96.3 16.2 125 87-222 36-169 (191) 12 4pbp_A C-reactive protein; acu 98.7 3.2E-07 9E-12 95.0 16.2 151 62-228 9-172 (210) 13 3pve_A Agrin, AGRN protein; mR 98.7 7.3E-07 2.1E-11 91.3 17.4 148 64-222 11-168 (189) 14 1pz7_A Agrin; structural prote 98.6 4.2E-07 1.2E-11 94.3 15.6 125 87-222 49-182 (204) 15 3flp_A SAP-like pentraxin; phy 98.6 1.4E-06 3.9E-11 90.5 17.7 158 62-228 6-175 (217) 16 4avs_A Serum amyloid P-compone 98.6 1.5E-06 4.4E-11 89.5 17.5 150 62-228 6-166 (204) 17 2h0b_A Neurexin-1-alpha; B-san 98.6 1.2E-06 3.4E-11 89.2 15.6 127 87-225 29-163 (184) 18 3pvn_A C-reactive protein; pen 98.6 1.9E-06 5.5E-11 88.8 17.2 150 62-228 6-168 (206) 19 3bod_A Neurexin-1-alpha; neure 98.5 2.6E-06 7.3E-11 86.7 16.2 124 87-222 30-154 (178) 20 2r16_A Neurexin-1-alpha; beta- 98.5 2.3E-06 6.4E-11 87.2 15.7 123 87-222 28-155 (182) 21 3asi_A Neurexin-1-alpha; beta- 98.3 1.1E-05 3.1E-10 92.7 16.0 125 87-223 250-375 (410) 22 2v73_A CBM40, putative EXO-alp 98.2 3.9E-05 1.1E-09 79.3 17.7 136 85-227 39-179 (191) 23 4c1w_A Neuraminidase; sugar bi 98.2 1.5E-05 4.1E-10 81.4 14.2 135 86-227 33-180 (188) 24 1d2s_A SHBG, sex hormone-bindi 98.2 2.7E-05 7.7E-10 78.6 15.1 121 86-222 26-154 (170) 25 2jd4_A Laminin subunit alpha-1 98.1 4.4E-05 1.3E-09 86.8 16.1 124 87-223 221-355 (383) 26 2r1d_A Neurexin-1-beta, neurex 98.1 5.9E-05 1.7E-09 80.1 15.8 124 87-222 64-188 (226) 27 1f5f_A SHBG, sex hormone-bindi 98.1 6.1E-05 1.7E-09 78.5 15.1 127 86-223 38-173 (205) 28 1dyk_A Laminin alpha 2 chain; 98.0 6.9E-05 2E-09 85.5 15.2 124 87-223 233-367 (394) 29 2r1b_A Neurexin-1-beta, neurex 98.0 8E-05 2.3E-09 78.5 14.6 125 87-222 36-190 (220) 30 4qvs_A S-layer domain-containi 97.9 2.2E-05 6.3E-10 81.7 9.0 163 53-227 38-212 (227) 31 1h30_A GAS6, growth-arrest-spe 97.6 0.0014 3.9E-08 75.6 16.9 126 87-222 62-195 (422) 32 2jd4_A Laminin subunit alpha-1 97.5 0.0021 6E-08 72.9 17.6 124 87-222 44-175 (383) 33 4dqa_A Uncharacterized protein 97.4 0.0023 6.5E-08 72.3 15.8 150 62-228 140-295 (355) 34 1a8d_A Tetanus neurotoxin; clo 97.4 0.0072 2E-07 70.6 19.4 165 51-228 47-235 (452) 35 1dyk_A Laminin alpha 2 chain; 97.3 0.003 8.3E-08 72.0 16.0 124 87-223 58-189 (394) 36 2wjs_A Laminin subunit alpha-2 97.3 0.0021 6E-08 77.7 15.1 123 87-222 408-539 (608) 37 2jkb_A Sialidase B; intramolec 97.3 0.0029 8.3E-08 77.8 16.1 163 62-232 34-210 (686) 38 3asi_A Neurexin-1-alpha; beta- 97.1 0.006 1.7E-07 70.0 15.5 121 87-222 27-160 (410) 39 1h30_A GAS6, growth-arrest-spe 97.0 0.0052 1.5E-07 70.8 13.9 127 87-221 250-392 (422) 40 2vu9_A Botulinum neurotoxin A 97.0 0.017 4.8E-07 65.8 17.4 166 50-229 48-229 (444) 41 3vuo_A NTNHA; protection of bo 97.0 0.015 4.2E-07 73.0 17.7 154 51-227 864-1024(1196) 42 3v0a_B NTNH; botulinum neuroto 96.9 0.017 4.7E-07 72.4 17.1 154 51-227 867-1027(1196) 43 2wjs_A Laminin subunit alpha-2 96.7 0.02 5.7E-07 69.2 16.0 126 87-222 226-363 (608) 44 3qcw_A Neurexin-1-alpha; synap 96.7 0.018 5.1E-07 75.5 16.4 122 89-222 1084-1206(1245) 45 3rsj_A BONT/F; clostridium bot 96.6 0.11 3.2E-06 58.5 19.7 163 50-229 29-210 (413) 46 3n7l_A Neurotoxin; HCR/D-SA, g 96.6 0.011 3E-07 68.4 12.0 164 51-229 32-218 (424) 47 3pme_A Type C neurotoxin; stru 96.5 0.054 1.5E-06 61.6 15.8 165 51-229 31-208 (420) 48 1epw_A Bontoxilysin B, botulin 96.2 0.11 3.1E-06 66.1 18.1 153 61-228 894-1067(1290) 49 2nyy_A Botulinum neurotoxin ty 96.1 0.16 4.5E-06 63.9 18.1 165 50-228 900-1080(1295) 50 3qcw_A Neurexin-1-alpha; synap 95.9 0.063 1.8E-06 70.5 14.9 121 87-222 859-992 (1245) 51 2vxr_A Botulinum neurotoxin ty 95.7 0.2 5.8E-06 57.1 15.4 163 50-229 76-260 (482) 52 2sli_A Intramolecular trans-si 95.7 0.19 5.3E-06 61.9 16.9 135 85-227 34-183 (679) 53 3ffz_A Botulinum neurotoxin ty 94.1 1.4 4E-05 55.6 18.1 162 51-229 876-1057(1252) 54 4b1m_A Levanase; hydrolase, CB 91.1 1 2.9E-05 45.8 9.9 90 86-182 64-157 (185) 55 4ccd_A Galactocerebrosidase; h 86.5 3.2 9.1E-05 50.8 11.4 89 87-182 528-622 (654) 56 1ms9_A Trans-sialidase; trans- 82.7 23 0.00065 43.3 16.3 124 87-225 495-625 (648) 57 1pwb_A SP-D, PSP-D, pulmonary 79.9 0.43 1.2E-05 47.4 0.0 12 916-927 164-175 (177) 58 1pwb_A SP-D, PSP-D, pulmonary 77.7 0.55 1.6E-05 46.6 0.0 7 872-878 112-118 (177) 59 2zzj_A Glucuronan lyase A; bet 75.1 36 0.001 36.2 13.2 128 50-182 21-180 (238) 60 3zyp_A CIP1; metal binding pro 61.8 71 0.002 33.7 11.7 89 87-182 66-163 (218) 61 3w9a_A CCGH131A, putative unch 59.8 55 0.0015 35.2 10.5 75 87-174 93-174 (245) 62 4le3_A Beta-glucanase; GH131, 59.6 52 0.0015 35.5 10.3 76 87-174 94-180 (252) 63 2dpr_A Conantokin-T, CON-T; co 57.5 5.5 0.00015 25.5 1.4 12 959-970 2-13 (21) 64 1buu_A Protein (mannose-bindin 44.4 5.7 0.00016 39.4 0.0 12 916-927 153-164 (168) 65 3imm_A Putative secreted glyco 41.2 30 0.00086 35.6 4.9 97 85-182 46-146 (201) 66 1o91_A Collagen alpha 1(VIII) 38.6 7.9 0.00022 39.4 0.0 55 830-890 70-125 (178) 67 3s5q_A Putative glycosylhydrol 35.4 1.2E+02 0.0033 31.7 8.3 96 85-182 59-159 (214) 68 1buu_A Protein (mannose-bindin 33.2 11 0.00031 37.3 0.0 6 784-789 71-76 (168) 69 1dyp_A Kappa-carrageenase; hyd 30.8 1.1E+02 0.003 32.9 7.3 30 154-183 188-217 (271) 70 3hbk_A Putative glycosyl hydro 25.8 1.7E+02 0.0049 31.0 7.8 28 155-182 162-190 (245) 71 3h3l_A Putative sugar hydrolas 23.1 63 0.0018 34.4 3.6 98 85-183 76-180 (241) 72 3osd_A Putative glycosyl hydro 22.8 94 0.0027 33.6 5.0 28 155-182 178-205 (265) 73 1axk_A Gluxyn-1; bifunctional, 21.9 1E+03 0.029 27.1 14.1 68 154-225 82-157 (394) 74 3h0o_A Beta-glucanase; 1,3-1,4 21.5 6.8E+02 0.019 26.3 11.3 29 154-182 91-119 (240) 75 3wvj_A Beta-glucanase; thermos 21.4 7.5E+02 0.021 25.3 14.3 29 154-182 142-170 (220) 76 4jqt_A Putative glycosyl hydro 21.2 3.1E+02 0.0089 31.5 9.3 93 85-182 51-154 (431)No 1>1dy2_A Collagen alpha1(XV) chain; angiogenesis inhibitor; 2.0A {Mus musculus} SCOP: d.169.1.5 Probab=100.00 E-value=3.5e-63 Score=492.84 Aligned_cols=174 Identities=52% Similarity=0.979 Sum_probs=164.4 Q ss_pred CCCCCCCceEEEEccCCCCCCCCCcccchhhhHHHhhhcCCCCceeEEEeccccCcccccCCCCC-CCccccCCCcEEec Q FBpp0290335 757 PPLLNTPTLRVAALNEPSTGDLQGIRGADFACYRQGRRAGLLGTFKAFLSSRVQNLDTIVRPADR-DLPVVNTRGDVLFN 835 (971) Q Consensus 757 ~~~~~~~~l~l~a~~~~~~g~~~Gi~GaD~~C~~~a~~~g~~gt~rA~Ls~~~~~~~~~v~~~dr-~~p~vn~~g~vl~~ 835 (971) |....+|+|||||||+|++|||+ ||++||+|||++|++|||||||||++||+++||+++|| ++||||+||+|||+ T Consensus 2 ~~~~~~~~L~lvALN~P~sG~m~----AD~~C~~qAraaGl~gTfRAfLSs~~qdl~~iV~~~DR~~~PivNlkGevLf~ 77 (180) T 1dy2_A 2 PLAYERPVLHLVALNTPVAGDIR----ADFQCFQQARAAGLLSTFRAFLSSHLQDLSTVVRKAERFGLPIVNLKGQVLFN 77 (180) T ss_dssp -----CCCEEEEECSSCBCSBCC----HHHHHHHHHHHTTCCSCEEESSCBTTBCGGGSSCGGGSSSCCEECTTSCEEES T ss_pred CccCCCccEEEEEcCCCCCCCch----HHHHHHHHHHHhCCCCceEEEeecccccCccccCHhHcCCCCeEcCCCCEEec Confidence 34557899999999999999999 99999999999999999999999999999999999999 79999999999999 Q ss_pred CccccccCCCCcccCCCceeecCCCccCCCCCCCcceEEecCCCCcccccCcccCcccCCCCCceeecccCCcccccccc Q FBpp0290335 836 SWKGIFNGQGGFFSQAPRIYSFSGKNVMTDSTWPMKMVWHGSLPNGERSMDTYCDAWHSGDHLKGSFASNLDGHKLLEQK 915 (971) Q Consensus 836 ~~~~l~~~~~~~~~~~~~i~~f~~~~~l~~~~~~~k~vW~Gs~~~g~~~~~~~C~~W~s~~~~~~g~as~~~~~~~~~~~ 915 (971) ||++||++++++|+.+.+||+||+||||+|++||||+|||||++||++.+++||++|||++.+++|+||+|.+++||.|+ T Consensus 78 sw~~lf~g~~~~l~~~~~Iysfdg~dVl~d~~wP~K~vWhGS~~~G~r~~d~~C~~W~s~~~~~~G~Assl~~g~ll~q~ 157 (180) T 1dy2_A 78 NWDSIFSGDGGQFNTHIPIYSFDGRDVMTDPSWPQKVVWHGSNPHGVRLVDKYCEAWRTTDMAVTGFASPLSTGKILDQK 157 (180) T ss_dssp CSGGGGSSSCCBCCTTSCCBBTTSCBTTTCTTCSSCEEECCBCTTSCBCTTSBHHHHBCCCTTCEEEEEEGGGTBSSCCE T ss_pred CHHHHhCCCCCccCCCCCeeccCCcccccCCCccccccccCCCCCCCCcccccccCCccCCCCceEeeeecCCCCcccCc Confidence 99999999998999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred ccccCCCceEEEEeccchh Q FBpp0290335 916 RQSCDSKLIILCVEALSQD 934 (971) Q Consensus 916 ~~~C~~~~~~lCve~~~~~ 934 (971) .+||+++||||||||+... T Consensus 158 ~~sC~~~~ivLCIEn~~~~ 176 (180) T 1dy2_A 158 AYSCANRLIVLCIENSFMT 176 (180) T ss_dssp EEETTSCBBCEEEECCC-- T ss_pred ccCCCCceEEEEEEccccc Confidence 9999999999999998654No 2>1koe_A Endostatin; angiogenesis inhibitor, collagen XVIII, non-collageneous domain, heparin-binding domain; 1.50A {Mus musculus} SCOP: d.169.1.5 PDB: 1dy0_A 1dy1_A 1bnl_A Probab=100.00 E-value=2.1e-62 Score=492.26 Aligned_cols=170 Identities=48% Similarity=0.921 Sum_probs=166.6 Q ss_pred CCceEEEEccCCCCCCCCCcccchhhhHHHhhhcCCCCceeEEEeccccCcccccCCCCC-CCccccCCCcEEecCcccc Q FBpp0290335 762 TPTLRVAALNEPSTGDLQGIRGADFACYRQGRRAGLLGTFKAFLSSRVQNLDTIVRPADR-DLPVVNTRGDVLFNSWKGI 840 (971) Q Consensus 762 ~~~l~l~a~~~~~~g~~~Gi~GaD~~C~~~a~~~g~~gt~rA~Ls~~~~~~~~~v~~~dr-~~p~vn~~g~vl~~~~~~l 840 (971) +|+|||||||+|++|||+||+|||++||+||+++|++||||||||+++||+++||+++|| ++||||+||||||+||+|| T Consensus 1 ~~~l~lvaln~p~~GnlgGi~GAD~~C~~~A~aaGl~gtfRAfLSs~~q~~~~iV~~~dr~~~P~vN~kg~vl~~~~~~l 80 (172) T 1koe_A 1 QPVLHLVALNTPLSGGMRGIRGADFQCFQQARAVGLSGTFRAFLSSRLQDLYSIVRRADRGSVPIVNLKDEVLSPSWDSL 80 (172) T ss_dssp CCCEEEEECSSCBCSCSSHHHHHHHHHHHHHHHTTCCSCEEESCCBTTBCGGGGSCGGGTTTCCEECTTCCEEESCHHHH T ss_pred CCceEEEEeCCCcCCCcccchhHHHHHHHHHHhcCCCCeeEEEEEcccCCccceeccccccCCCeECCcCcEEeCCHHHh Confidence 478999999999999999999999999999999999999999999999999999999999 7999999999999999999 Q ss_pred ccCCCCcccCCCceeecCCCccCCCCCCCcceEEecCCCCcccccCcccCcccCCCCCceeecccCCccccccccccccC Q FBpp0290335 841 FNGQGGFFSQAPRIYSFSGKNVMTDSTWPMKMVWHGSLPNGERSMDTYCDAWHSGDHLKGSFASNLDGHKLLEQKRQSCD 920 (971) Q Consensus 841 ~~~~~~~~~~~~~i~~f~~~~~l~~~~~~~k~vW~Gs~~~g~~~~~~~C~~W~s~~~~~~g~as~~~~~~~~~~~~~~C~ 920 (971) |++++++|+++..||+||+||||+|++||+|+|||||++||+|..++||++|||++.+++|+||+|++++||+|+.++|+ T Consensus 81 ~~~~~~~~~~~~~i~sfn~~dvl~d~~wp~k~vWtGs~~~G~~~~~~~C~~Wts~~~~~~G~assl~~~~ll~q~~~sCs 160 (172) T 1koe_A 81 FSGSQGQLQPGARIFSFDGRDVLRHPAWPQKSVWHGSDPSGRRLMESYCETWRTETTGATGQASSLLSGRLLEQKAASCH 160 (172) T ss_dssp TSSSCSBCCTTCCCBBTTSCBTTTCTTSSSCEEECCBCTTSCBCTTSBHHHHTCCCTTCEEEEEEGGGTBSCCCEEEETT T ss_pred cCCCCccccCCCceEccCCCccccCCCCccceeEECCCCCCcCcCCCcccCCcCCCCCceEeeccCCCCCcccCcCCCcC Confidence 99999999999999999999999999999999999999999998899999999999999999999999999999999999 Q ss_pred CCceEEEEecc Q FBpp0290335 921 SKLIILCVEAL 931 (971) Q Consensus 921 ~~~~~lCve~~ 931 (971) ++|+||||||+ T Consensus 161 ~~~~vLCIE~~ 171 (172) T 1koe_A 161 NSYIVLCIENS 171 (172) T ss_dssp SCBBCEEEECC T ss_pred CCcEEEEEeec Confidence 99999999996No 3>2uur_A Collagen alpha-1(IX) chain; glycoprotein, hydroxylation, structural protein, NC4, collagen IX, polymorphism, extracellular matrix; 1.8A {Homo sapiens} Probab=100.00 E-value=2.6e-33 Score=301.62 Aligned_cols=195 Identities=18% Similarity=0.266 Sum_probs=164.8 Q ss_pred cccccccccccccCC---CCCcEEEeccCCC-CcceEecCCccccCCccccCCCCCC-ceEEEEEEeecCCC---CceEE Q FBpp0290335 34 DALAEYTLTDIMNNN---QFAGIEFGEAEDG-FPAFRFLQTADVKSPYRMLLPEKLY-EFAILITFRQSSLK---GGYLF 105 (971) Q Consensus 34 D~l~~~dL~~l~~~~---~~~GV~~v~G~d~-~pAy~f~~~a~l~~pt~~lfP~~l~-eFSilaT~R~~~~~---~g~Lf 105 (971) |.++.|||+++++.+ .+.||++|+|++. ++||+|.+.+++.+|++++||++|+ ||||++|||+.+.+ .|+|| T Consensus 29 ~~~~~~Dll~~l~l~~~~~~~gv~~v~G~~~~~~ay~~~~~a~l~~pt~~~fP~~lp~eFsi~~tlr~~~~~~~~~~~Lf 108 (245) T 2uur_A 29 DDLPGFDLISQFQVDKAASRRAIQRVVGSATLQVAYKLGNNVDFRIPTRNLYPSGLPEEYSFLTTFRMTGSTLKKNWNIW 108 (245) T ss_dssp -CCCEEEHHHHTTHHHHHTTTSSCEEECSSTTCEEEEECSSCCCEEEHHHHCTTCCCSSEEEEEEEECCGGGGGCEEEEE T ss_pred CCCCCcceeHhhCCCCcCCCCCeeEccCCCCCccEEEECCCcccCcchHHhccccCCCCEEEEEEEEccCCCCCCceEEE Confidence 456677777776665 4799999999765 8999999999999999999999998 99999999986544 35999 Q ss_pred EEEeCCCCeEEEEEEEcccccCceeEEEEEEecCCCcceeEeeecc--cCCCccceEEEEEEeCCeeEEEEcccccceee Q FBpp0290335 106 SVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLASFGV--AHVPDKWNSIALQVLSDKVSFYYDCELRNTTL 183 (971) Q Consensus 106 sV~~~~~~~~qlgl~lsg~~~~~~~i~L~Y~~~~~~~~~~~~sF~v--~l~dg~WHrlaLsV~g~~VtLyvDC~~~~t~~ 183 (971) +|++. ++.+||+|+|++. ++.+.|+|++.++. .+.++|.+ +++|++||||+|+|++++|+|||||+++.++. T Consensus 109 si~~~-~~~~qlgl~l~~~---~~~v~~~y~~~~G~--~~~~~F~~~~~l~dg~WH~lalsV~~~~VtLyvDC~~~~~~~ 182 (245) T 2uur_A 109 QIQDS-SGKEQVGIKINGQ---TQSVVFSYKGLDGS--LQTAAFSNLSSLFDSQWHKIMIGVERSSATLFVDCNRIESLP 182 (245) T ss_dssp EEECT-TSCEEEEEEEEGG---GTEEEEEEEBTTSC--EEEEEECCCGGGCSSSCEEEEEEEETTEEEEEETTEEEEEEE T ss_pred EEEcC-CCCEEEEEEEcCC---CCEEEEEEECCCCC--EEEEEECCCCccCCCCEEEEEEEEECCEEEEEEeCCcCcccc Confidence 99997 6899999999986 34699999987543 35789965 99999999999999999999999999999998 Q ss_pred eccCCcccccCCCceEEEeccCCccCcccceeeeeeEEecCCccc-cccCCCCCC Q FBpp0290335 184 VTREPIELVFDSASTLYIGQAGSIIGGKFEGYLEKINVYGNPDAI-NVTCMPPPK 237 (971) Q Consensus 184 l~r~p~~l~~~~~~~l~IGq~g~~~~~~F~G~LQ~L~I~~dp~~a-~~~C~~~p~ 237 (971) +.+. . .++.++.++||++.......|+|+||+|+|+||++++ +++||+++. T Consensus 183 l~~~-~--~l~~~g~~~lG~~~~~~~~~f~G~lQ~l~i~~~p~~a~~~~C~e~~~ 234 (245) T 2uur_A 183 IKPR-G--PIDIDGFAVLGKLADNPQVSVPFELQWMLIHCDPLRPRRETCHELPA 234 (245) T ss_dssp CCCB-C--CCCCSSEEEEEEESSCTTCBCCEEEEEEEEESCTTGGGGCCCTTCC- T ss_pred ccCC-C--ccCcCCEEEEEeccCCCCCeEEEEEEEEEEEcCCCchhhCccccCCC Confidence 8762 2 3466789999998543333899999999999999998 899999875No 4>2erf_A Thrombospondin-1; TSP-1, N-terminal TSPN, HBD, sugar binding protein; 1.45A {Homo sapiens} SCOP: b.29.1.4 PDB: 2es3_A 1z78_A Probab=99.97 E-value=1.6e-31 Score=281.18 Aligned_cols=194 Identities=16% Similarity=0.204 Sum_probs=159.4 Q ss_pred cccccccccccccCCC-CCcEEEeccCCC-CcceEecCCccccCCccccCCCC-----CC-ceEEEEEEeecCCCCceEE Q FBpp0290335 34 DALAEYTLTDIMNNNQ-FAGIEFGEAEDG-FPAFRFLQTADVKSPYRMLLPEK-----LY-EFAILITFRQSSLKGGYLF 105 (971) Q Consensus 34 D~l~~~dL~~l~~~~~-~~GV~~v~G~d~-~pAy~f~~~a~l~~pt~~lfP~~-----l~-eFSilaT~R~~~~~~g~Lf 105 (971) |+++.|||+++++.+. +.||++++|.+. ++||+|.+.+++.++++++||+. |+ ||+|++|||+.+++.|+|| T Consensus 2 ~d~~~~Dll~~~~l~~~~~gv~~~~G~~~~~~ay~~~~~a~l~~~t~~~~P~~~~~l~~~~~Fsi~~tlr~~~~~~~~L~ 81 (209) T 2erf_A 2 GDNSVFDIFELTGAARKGSGRRLVKGPDPSSPAFRIEDANLIPPVPDDKFQDLVDAVRTEKGFLLLASLRQMKKTRGTLL 81 (209) T ss_dssp CTTCEEEHHHHHTTTTSCSSEEEECCSSTTSCEEEESCGGGSCCCCHHHHHHHHHHHHHHTEEEEEEEEEECTTCEEEEE T ss_pred CCcceeeehhhhCCCCccCceEEeeCCCCCccEEEEecccccccCchHhccchhhhhcCCCcEEEEEEEEeCCCCCeEEE Confidence 6678899999888876 789999999876 99999999999999999999999 77 9999999999999999999 Q ss_pred EEEeCCCCeEEEEEEEcccccCceeEEEEEEecCCCcceeEeee-cccCCCccceEEEEEEeCCeeEEEEcccccceeee Q FBpp0290335 106 SVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLASF-GVAHVPDKWNSIALQVLSDKVSFYYDCELRNTTLV 184 (971) Q Consensus 106 sV~~~~~~~~qlgl~lsg~~~~~~~i~L~Y~~~~~~~~~~~~sF-~v~l~dg~WHrlaLsV~g~~VtLyvDC~~~~t~~l 184 (971) +|++..+..+||+|+|++. ++++.|+|+..+ .++.++| .++++|++||||+|+|++++|+|||||+++.+..+ T Consensus 82 si~~~~~~~~~lgl~l~~~---~~~l~~~y~~~g---~~~~~~f~~~~l~dg~WH~lal~V~~~~V~LyvDC~~~~~~~l 155 (209) T 2erf_A 82 ALERKDHSGQVFSVVSNGK---AGTLDLSLTVQG---KQHVVSVEEALLATGQWKSITLFVQEDRAQLYIDCEKMENAEL 155 (209) T ss_dssp EEEETTSSCEEEEEEEETT---TTEEEEEEEETT---EEEEEEESSCCCCSSSEEEEEEEEETTEEEEEETTTEEEEEEC T ss_pred EEECCCCCEEEEEEEEeCC---CcEEEEEEecCC---CEEEEEEcCccccCCcEEEEEEEEECCEEEEEECCcccceeEc Confidence 9999854457899999986 245999999743 3466778 69999999999999999999999999999999988 Q ss_pred ccCCcccccCCCceEEEeccCCc--cCcccceeeeeeEEecCCcccc---ccCCC Q FBpp0290335 185 TREPIELVFDSASTLYIGQAGSI--IGGKFEGYLEKINVYGNPDAIN---VTCMP 234 (971) Q Consensus 185 ~r~p~~l~~~~~~~l~IGq~g~~--~~~~F~G~LQ~L~I~~dp~~a~---~~C~~ 234 (971) ++. ....++.+..+++|++... ..++|+|+||+|+|+++++++. .+||+ T Consensus 156 ~~~-~~~~~~~g~~~~~G~~~~~~g~~~~F~G~iq~l~i~~~~~~~~~~~~~~c~ 209 (209) T 2erf_A 156 DVP-IQSVFTRDLASIARLRIAKGGVNDNFQGVLQNVRFVFGTTPEDILRNKGCS 209 (209) T ss_dssp SSC-GGGTCCTTHHHHEEEEESCCTTTCBCCEEEEEEEEECSCCHHHHHHTTCCC T ss_pred CCc-cccccCCCCeeeEEEEecCCCCcccceEEeeEEEEEeCCCHHHhhhhccCC Confidence 873 1122333433344544111 1248999999999999998764 77874No 5>1za4_A Thrombospondin 1; TSP-1, NTSP-1, HBD, arixtra, cell adhesion; HET: SGN; 1.90A {Homo sapiens} SCOP: b.29.1.4 PDB: 2ouh_A 2ouj_A Probab=99.97 E-value=3.8e-30 Score=277.89 Aligned_cols=195 Identities=18% Similarity=0.266 Sum_probs=155.3 Q ss_pred cccccccccccccCCC-CCcEEEeccCCC-CcceEecCCccccCCccccCCCC---C--C-ceEEEEEEeecCCCCceEE Q FBpp0290335 34 DALAEYTLTDIMNNNQ-FAGIEFGEAEDG-FPAFRFLQTADVKSPYRMLLPEK---L--Y-EFAILITFRQSSLKGGYLF 105 (971) Q Consensus 34 D~l~~~dL~~l~~~~~-~~GV~~v~G~d~-~pAy~f~~~a~l~~pt~~lfP~~---l--~-eFSilaT~R~~~~~~g~Lf 105 (971) ++...|||+++++.+. +.||++++|.+. .+||+|.+.+.+..+++++||.+ | + ||||++|||+.+++.|+|| T Consensus 12 ~d~~~~DLl~~lgl~~~~~GV~~~~G~~~~~~Ay~~~~~~~~~~~t~~~~P~g~~~~~~p~eFsi~~tlr~~~~~~~~Lf 91 (251) T 1za4_A 12 GDNSVFDIFELTGAARKGSGRRLVKGPDPSSPAFRIEDANLIPPVPDDKFQDLVDAVRTEKGFLLLASLRQMKKTRGTLL 91 (251) T ss_dssp ---CEEEHHHHHCCCCTTSSEEEECCSSTTSCEEEESCGGGSCCCCHHHHHHHHHHHHHHTEEEEEEEEEECTTCEEEEE T ss_pred CcccCcceehhhCCCCccCCeEEccCCCCCccEEEEcCcccccCChhHhCcchhhccCCCCcEEEEEEEEecCCCCcEEE Confidence 5688899999988886 689999999876 99999999999999999999994 8 7 9999999999999999999 Q ss_pred EEEeCCCCeEEEEEEEcccccCceeEEEEEEecCCCcceeEeee-cccCCCccceEEEEEEeCCeeEEEEcccccceeee Q FBpp0290335 106 SVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLASF-GVAHVPDKWNSIALQVLSDKVSFYYDCELRNTTLV 184 (971) Q Consensus 106 sV~~~~~~~~qlgl~lsg~~~~~~~i~L~Y~~~~~~~~~~~~sF-~v~l~dg~WHrlaLsV~g~~VtLyvDC~~~~t~~l 184 (971) +|+|+.+..++|+|+|++. ++.+.|+|++.+ .+++++| .++++|++||||+|+|++++|+|||||+++.++.+ T Consensus 92 si~d~~~~~q~lgv~l~g~---~~~l~~~y~~~G---~~~~~~f~~~~L~dg~WH~lalsV~~~~VtLyvDC~~~~~~~l 165 (251) T 1za4_A 92 ALERKDHSGQVFSVVSNGK---AGTLDLSLTVQG---KQHVVSVEEALLATGQWKSITLFVQEDRAQLYIDCEKMENAEL 165 (251) T ss_dssp EEEETTSSCEEEEEEEETT---TTEEEEEEEETT---EEEEEEESSCCCCSSSCEEEEEEEETTEEEEEETTSCCEEEEC T ss_pred EEEcCCCCEEEEEEEEeCC---CcEEEEEEecCC---CEEEEEEeccccCCCcEEEEEEEEECCEEEEEECCcccccccc Confidence 9999854445589999986 245999999843 3467788 69999999999999999999999999999999988 Q ss_pred ccCCcccccCCC----ceEEEeccCCccCcccceeeeeeEE--ecCCcccc-ccCCCCCC Q FBpp0290335 185 TREPIELVFDSA----STLYIGQAGSIIGGKFEGYLEKINV--YGNPDAIN-VTCMPPPK 237 (971) Q Consensus 185 ~r~p~~l~~~~~----~~l~IGq~g~~~~~~F~G~LQ~L~I--~~dp~~a~-~~C~~~p~ 237 (971) ++....+ +..+ +.+++++.+ . .+.|+|+||+|+| +||++++. +.||+++. T Consensus 166 ~~~~~~~-~~~G~~~~g~~~~~~g~-~-~~~f~G~lq~L~Iv~~~d~~~a~~~~~Ce~~~ 222 (251) T 1za4_A 166 DVPIQSV-FTRDLASIARLRIAKGG-V-NDNFQGVLQNVRFVFGTTPEDILRNKGCSSST 222 (251) T ss_dssp SSCGGGT-SCTTGGGTEEEEESCCS-T-TCBCCEEEEEEEEECSCCHHHHHHHTTCC--- T ss_pred cCCcccc-cCCCcEEEEEEEecCCC-C-ccceEEEEEEEEEEccCChhhhccccCCCCCC Confidence 7731122 2333 344444321 1 3589999999999 77777653 78888664No 6>3hqv_A Collagen alpha-1(I) chain; native, in SITU, molecular envelope, triple-helical, supermolecular, supramolecular, packing structure; 5.16A {Rattus norvegicus} SCOP: i.25.1.1 PDB: 3hr2_A Probab=99.96 E-value=1.2e-27 Score=299.40 Aligned_cols=31 Identities=45% Similarity=0.787 Sum_probs=13.2 Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC Q FBpp0290335 617 GPKGEPGVDSRSSFFGDASYYGRPEPPRQPG 647 (971) Q Consensus 617 G~~G~~G~~g~~~~~g~~~~~g~pgppg~~g 647 (971) |+.|++|..+..+..|..+..|+++++|+++ T Consensus 998 G~~G~~G~~G~~G~~G~~G~~G~pGppGpPG 1028 (1056) T 3hqv_A 998 GPIGPPGPRGRTGDSGPAGPPGPPGPPGPPG 1028 (1056) T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC Confidence 3344444444444444444444444444444No 7>3hqv_B Collagen alpha-2(I) chain; native, in SITU, molecular envelope, triple-helical, supermolecular, supramolecular, packing structure; 5.16A {Rattus norvegicus} SCOP: i.25.1.1 PDB: 3hr2_B Probab=99.96 E-value=2.6e-27 Score=295.83 Aligned_cols=6 Identities=50% Similarity=1.154 Sum_probs=2.1 Q ss_pred CCCCCC Q FBpp0290335 640 PEPPRQ 645 (971) Q Consensus 640 pgppg~ 645 (971) +++||+ T Consensus 1016 pGppGp 1021 (1028) T 3hqv_B 1016 PGPPGP 1021 (1028) T ss_pred CCCCCC Confidence 333333No 8>3hsh_A Endostatin, collagen alpha-1(XVIII) chain; extracellular matrix, basement membrane, collagen trimerization domain, folding, association; 1.80A {Homo sapiens} PDB: 3hon_A Probab=99.64 E-value=1.3e-16 Score=130.95 Aligned_cols=52 Identities=27% Similarity=0.484 Sum_probs=50.7 Q ss_pred eeEEecChHHHhhccCCCCCcceEEecccceEEEEEcCCceEeeccccccCC Q FBpp0290335 680 GAVTFQNIDEMTKKSALNPPGTLAYITEEEALLVRVNKGWQYIALGTLVPIA 731 (971) Q Consensus 680 ~~~~~~~~~~m~~~~~~~~~Gtl~y~~~~~~l~vrv~~g~~~I~lg~~~p~~ 731 (971) |+++|+|+++|+++++.++||||||++|+++|||||+||||+|+|+.++|++ T Consensus 4 gv~~~~t~~~ml~~~~~~~eGtL~yv~d~~eLyiRVr~Gwr~V~Lg~~~pip 55 (56) T 3hsh_A 4 GVRLWATRQAMLGQVHEVPEGWLIFVAEQEELYVRVQNGFRKVQLEARTPLP 55 (56) T ss_dssp CEEEESSHHHHHHHGGGSCTTCEEEETTTTEEEEEETTEEEEECEEEEEECC T ss_pred cEEEEecHHHHHhhCccCCCeEEEEEEecceEEEEEcCcEEEEeecccccCC Confidence 6899999999999999999999999999999999999999999999999986No 9>3n3f_A Collagen alpha-1(XV) chain; extracellular matrix, basement membrane, collagen trimerization domain, folding, association, chain selection helix; 2.00A {Homo sapiens} Probab=99.63 E-value=2.1e-16 Score=128.96 Aligned_cols=52 Identities=35% Similarity=0.742 Sum_probs=49.9 Q ss_pred eeEEecChHHHhhccCCCCCcceEEecccceEEEEEcCCceEeeccccccCC Q FBpp0290335 680 GAVTFQNIDEMTKKSALNPPGTLAYITEEEALLVRVNKGWQYIALGTLVPIA 731 (971) Q Consensus 680 ~~~~~~~~~~m~~~~~~~~~Gtl~y~~~~~~l~vrv~~g~~~I~lg~~~p~~ 731 (971) +|++|+|+++|+++++.+++|||||++|+++|||||+||||+|+||.++|++ T Consensus 2 ~v~~~~t~~~M~~~~~~~~eGtL~yv~d~~eLyiRVr~Gwr~V~Lg~~ip~p 53 (54) T 3n3f_A 2 LVTAFSNMDDMLQKAHLVIEGTFIYLRDSTEFFIRVRDGWKKLQLGELIPIP 53 (54) T ss_dssp CEEEESSHHHHHTTGGGSCTTEEEEETTTTEEEEEETTEEEECCCCCCCCCC T ss_pred CcEEEecHHHHHhhCccCCCeEEEEEEecceEEEEEcCceeeeeecccccCC Confidence 4799999999999999999999999999999999999999999999999874No 10>3sh4_A LG3 peptide; actin disassambly, integrin alpha12 BETA1, metal binding Pro; 1.50A {Homo sapiens} SCOP: b.29.1.0 PDB: 3sh5_A Probab=98.80 E-value=9.8e-08 Score=98.06 Aligned_cols=149 Identities=12% Similarity=0.092 Sum_probs=98.2 Q ss_pred cceEecCCccccCCccccCCCC-CC-ceEEEEEEeecCCCCceEEEEEeC----CCCeEEEEEEEcccccCceeEEEEEE Q FBpp0290335 63 PAFRFLQTADVKSPYRMLLPEK-LY-EFAILITFRQSSLKGGYLFSVVNP----LDTVVQLGVHLSPVVKNSYNVSLVYT 136 (971) Q Consensus 63 pAy~f~~~a~l~~pt~~lfP~~-l~-eFSilaT~R~~~~~~g~LfsV~~~----~~~~~qlgl~lsg~~~~~~~i~L~Y~ 136 (971) .+..|.....+..+.. .|+.. .. +|+|.+.||... ..+.||.+.+. .....+|.|+|..-. +.|.|. T Consensus 6 ~~~~F~g~sy~~~~~~-~~~~~~~~~~~~is~~frT~~-~~Glll~~~~~~~~~~~~~d~~~l~l~~G~-----l~~~~~ 78 (195) T 3sh4_A 6 YGAYFHDDGFLAFPGH-VFSRSLPEVPETIELEVRTST-ASGLLLWQGVEVGEAGQGKDFISLGLQDGH-----LVFRYQ 78 (195) T ss_dssp TEEEEEEEEEEEECGG-GGCCCSTTCCEEEEEEEEECC-SSEEEEEECCCTTCTTSTTCEEEEEEETTE-----EEEEEE T ss_pred cccEECCCceEEECcc-cccccccCCCcEEEEEEEeCC-CCeEEEEccCcccCCCCCCCeEEEEEECCE-----EEEEEE Confidence 4556665555555544 23332 23 899999999654 45688766531 234578888886542 777776 Q ss_pred ecCCCcceeEeeecccCCCccceEEEEEEeCCeeEEEEcccccceeeeccCCcccccCCCceEEEeccCCc-------cC Q FBpp0290335 137 QADQNIGRKLASFGVAHVPDKWNSIALQVLSDKVSFYYDCELRNTTLVTREPIELVFDSASTLYIGQAGSI-------IG 209 (971) Q Consensus 137 ~~~~~~~~~~~sF~v~l~dg~WHrlaLsV~g~~VtLyvDC~~~~t~~l~r~p~~l~~~~~~~l~IGq~g~~-------~~ 209 (971) ..+.. ..+.....+.|++||+|+|...+..++|||||....+...+..... ++....||||..... .. T Consensus 79 ~g~g~---~~i~s~~~l~Dg~WH~V~v~~~~~~~~L~VD~~~~~~~~~~~~~~~--l~~~~~l~iGG~~~~~~~~~~~~~ 153 (195) T 3sh4_A 79 LGSGE---ARLVSEDPINDGEWHRVTALREGRRGSIQVDGEELVSGRSPGPNVA--VNAKGSVYIGGAPDVATLTGGRFS 153 (195) T ss_dssp CSSCE---EEEEEEEECCSSSCEEEEEEEETTEEEEEETTCCCEEEECCSSCCC--CCCCSCEEESCCTTHHHHTTTSCC T ss_pred CCCCE---EEEEcCCeecCCCeEEEEEEEeCCEEEEEECCcceeeEECCCccce--ecCCCCEEECCCCCcccccccccc Confidence 54332 2233366789999999999999999999999998765544332112 345678999865211 12 Q ss_pred cccceeeeeeEEec Q FBpp0290335 210 GKFEGYLEKINVYG 223 (971) Q Consensus 210 ~~F~G~LQ~L~I~~ 223 (971) ..|+|-|++|+|.- T Consensus 154 ~~F~GCi~~v~i~~ 167 (195) T 3sh4_A 154 SGITGCVKNLVLHS 167 (195) T ss_dssp CCCSEEEEEEEEEE T ss_pred CCcEEEeeEEEECC Confidence 46999999999963No 11>3v64_A Low-density lipoprotein receptor-related protein; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus} SCOP: b.29.1.4 PDB: 3v65_A Probab=98.76 E-value=1.5e-07 Score=96.32 Aligned_cols=125 Identities=15% Similarity=0.200 Sum_probs=86.7 Q ss_pred ceEEEEEEeecCCCCceEEEEEeCCCCeEEEEEEEcccccCceeEEEEEEecCCCcceeEeeecccCCCccceEEEEEEe Q FBpp0290335 87 EFAILITFRQSSLKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLASFGVAHVPDKWNSIALQVL 166 (971) Q Consensus 87 eFSilaT~R~~~~~~g~LfsV~~~~~~~~qlgl~lsg~~~~~~~i~L~Y~~~~~~~~~~~~sF~v~l~dg~WHrlaLsV~ 166 (971) +|+|.++||... ..+.||...+..+...+|.|+|..- + +.|.|...+.. ..+.....+.|++||+|++... T Consensus 36 ~~~is~~frT~~-~~glll~~~~~~~~~~~~~l~l~~G---~--l~~~~~~g~~~---~~~~~~~~v~Dg~WH~V~v~~~ 106 (191) T 3v64_A 36 SNHFELSLRTEA-TQGLVLWIGKAAERADYMALAIVDG---H--LQLSYDLGSQP---VVLRSTVKVNTNRWLRIRAHRE 106 (191) T ss_dssp EEEEEEEEECSC-SSEEEEEESCCSTTCCEEEEEEETT---E--EEEEEESSSCC---EEEEEEEECTTSSCEEEEEEEE T ss_pred ceEEEEEEEeCC-CCeEEEEeCCCCCCCCEEEEEEECC---E--EEEEEECCCCc---EEEEeCCEecCCCcEEEEEEEE Confidence 899999999765 4567776654323467888888543 2 77777654332 2233456788999999999999 Q ss_pred CCeeEEEEcccccceeeeccCCcccccCCCceEEEeccCCc---------cCcccceeeeeeEEe Q FBpp0290335 167 SDKVSFYYDCELRNTTLVTREPIELVFDSASTLYIGQAGSI---------IGGKFEGYLEKINVY 222 (971) Q Consensus 167 g~~VtLyvDC~~~~t~~l~r~p~~l~~~~~~~l~IGq~g~~---------~~~~F~G~LQ~L~I~ 222 (971) +..++||||+....+...+..... ++....||||..... ....|+|-|++|+|. T Consensus 107 ~~~~~L~vD~~~~~~~~~~~~~~~--l~~~~~l~iGg~~~~~~~~~~~~~~~~~F~Gci~~v~i~ 169 (191) T 3v64_A 107 HREGSLQVGNEAPVTGSSPLGATQ--LDTDGALWLGGLQKLPVGQALPKAYGTGFVGCLRDVVVG 169 (191) T ss_dssp TTEEEEEETTSCCEEEECCTTCCC--EEECSEEEESCCSSCCSSCCSCGGGTSBCEEEEEEEEET T ss_pred ccEEEEEECCcceEeeECCCCccc--CcCCCCEEECCCCcccccccccccccCCCeEEeeEEEEC Confidence 999999999987655544332222 334568999865221 124699999999995No 12>4pbp_A C-reactive protein; acute phase protein, pentraxin; 1.65A {Danio rerio} PDB: 4pbo_A Probab=98.69 E-value=3.2e-07 Score=95.03 Aligned_cols=151 Identities=17% Similarity=0.173 Sum_probs=99.3 Q ss_pred CcceEecCC---ccccCCccccCCCCCCceEEEEEEeecCC--CCceEEEEEeCCCCeEEEEEEEcccccCceeEEEEEE Q FBpp0290335 62 FPAFRFLQT---ADVKSPYRMLLPEKLYEFAILITFRQSSL--KGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYT 136 (971) Q Consensus 62 ~pAy~f~~~---a~l~~pt~~lfP~~l~eFSilaT~R~~~~--~~g~LfsV~~~~~~~~qlgl~lsg~~~~~~~i~L~Y~ 136 (971) ..|+.|... ..+..+....+ ...+|+|.+++|+... ....||+..+.. .. .|.|.+... ++ +.|... T Consensus 9 g~al~F~g~s~~~~v~~~~~~~~--~~~~fTi~~Wvk~~~~~~~~~~i~s~~~~~-~~-~~~l~~~~~--~~--~~~~~~ 80 (210) T 4pbp_A 9 GKVLQFKTATDNSYVKLYPEKPL--SLSAFTLCMRVATELPLDREVILFAYYTPD-VD-ELNVWRERD--GR--VSLYIQ 80 (210) T ss_dssp TEEEEECSCCSSCEEEEECSSCC--CBSEEEEEEEEECCSCTTSCEEEEEEEETT-EE-EEEEEECTT--SC--EEEEES T ss_pred CcEEECCCCCccCeEEEcCCCCC--CcCCEEEEEEEEcCCCCCCCceEEEEEcCC-CC-cEEEEEcCC--Cc--EEEEEE Confidence 457888754 33443332222 2349999999999765 467899988753 32 666665532 22 445443 Q ss_pred ecCCCcceeEeeecccCCCccceEEEEEEeCC--eeEEEEcccccceeeeccCCcccccCCCceEEEeccCCc------c Q FBpp0290335 137 QADQNIGRKLASFGVAHVPDKWNSIALQVLSD--KVSFYYDCELRNTTLVTREPIELVFDSASTLYIGQAGSI------I 208 (971) Q Consensus 137 ~~~~~~~~~~~sF~v~l~dg~WHrlaLsV~g~--~VtLyvDC~~~~t~~l~r~p~~l~~~~~~~l~IGq~g~~------~ 208 (971) ..+. .+.+...+.+++||+|++...+. .++||||.+++.+..+... ..+.....++||+.... . T Consensus 81 ~~~~-----~~~~~~~~~~~~W~hva~t~d~~~g~~~lYvnG~~~~~~~~~~~---~~~~~~~~l~iG~~~~~~gg~~~~ 152 (210) T 4pbp_A 81 SSKD-----AAFFRLPPLSTLQTHLCVAWESATGLTAFWMDGRRSLHQVYRKG---YSIRSGGTVVLGQDPDSYVGSFDV 152 (210) T ss_dssp CSSC-----CEEECCCCCCSSCEEEEEEEETTTCEEEEEETTEECCCEECCTT---CCBCSSCEEEESSCCSBTTBCCCG T ss_pred cCCc-----eEEecCcccCCCEEEEEEEEECCCCcEEEEECCeEccCcccCCC---cEECCCCeEEEccccccCCCccCc Confidence 2221 12345677899999999999976 8999999999886544331 11345678999976321 2 Q ss_pred CcccceeeeeeEEecCCccc Q FBpp0290335 209 GGKFEGYLEKINVYGNPDAI 228 (971) Q Consensus 209 ~~~F~G~LQ~L~I~~dp~~a 228 (971) ...|.|.|.+|+|+..+..+ T Consensus 153 ~~~f~G~idevri~~~aLs~ 172 (210) T 4pbp_A 153 DQSFVGEIANLQMWDYVLSS 172 (210) T ss_dssp GGCCCEEEEEEEEESSCCCH T ss_pred cccceEEecceEEecccCCH Confidence 35799999999999776443No 13>3pve_A Agrin, AGRN protein; mRNA splicing, structural genomics, PSI-2, protein structure initiative; 1.40A {Mus musculus} SCOP: b.29.1.0 Probab=98.66 E-value=7.3e-07 Score=91.29 Aligned_cols=148 Identities=12% Similarity=0.092 Sum_probs=94.7 Q ss_pred ceEecCCccccCCccccCCCCCC-ceEEEEEEeecCCCCceEEEEEeC-CCCeEEEEEEEcccccCceeEEEEEEecCCC Q FBpp0290335 64 AFRFLQTADVKSPYRMLLPEKLY-EFAILITFRQSSLKGGYLFSVVNP-LDTVVQLGVHLSPVVKNSYNVSLVYTQADQN 141 (971) Q Consensus 64 Ay~f~~~a~l~~pt~~lfP~~l~-eFSilaT~R~~~~~~g~LfsV~~~-~~~~~qlgl~lsg~~~~~~~i~L~Y~~~~~~ 141 (971) +..|.....+..+....++..+. +|+|.+.||.... .+.||...+. .....++.|+|..-. +.|.|...+.. T Consensus 11 ~~~F~g~syl~~~~~~~~~~~~~~~~~isl~frT~~~-~GlLl~~~~~~~~~~d~~~l~l~~G~-----l~~~~~~g~~~ 84 (189) T 3pve_A 11 LADFNGFSYLELKGLHTFERDLGEKMALEMVFLARGP-SGLLLYNGQKTDGKGDFVSLALHNRH-----LEFRYDLGKGA 84 (189) T ss_dssp CEEEESSCEEEECCGGGC-------CEEEEEEEESSS-CEEEEEEESCC-CCSCEEEEEEETTE-----EEEEEESSSCE T ss_pred eeEECCCceEEEcCcccccccccceEEEEEEEecCCC-CeEEEEecCCCCCCCCeEEEEEECCE-----EEEEEECCCCe Confidence 44566555566665555544454 8999999997654 5688877753 123567888886542 67777644321 Q ss_pred cceeEeeecccCCCccceEEEEEEeCCeeEEEEcccccceeeeccCCcccccCCCceEEEeccCCc--------cCcccc Q FBpp0290335 142 IGRKLASFGVAHVPDKWNSIALQVLSDKVSFYYDCELRNTTLVTREPIELVFDSASTLYIGQAGSI--------IGGKFE 213 (971) Q Consensus 142 ~~~~~~sF~v~l~dg~WHrlaLsV~g~~VtLyvDC~~~~t~~l~r~p~~l~~~~~~~l~IGq~g~~--------~~~~F~ 213 (971) ..+.....+.|++||+|++...+..++||||+....+...+..... ++....||||..... ....|. T Consensus 85 ---~~~~s~~~v~Dg~WH~V~v~~~~~~~~L~vD~~~~~~~~~~~~~~~--l~~~~~l~iGG~~~~~~~~~~~~~~~~F~ 159 (189) T 3pve_A 85 ---AIIRSKEPIALGTWVRVFLERNGRKGALQVGDGPRVLGESPVPHTM--LNLKEPLYVGGAPDFSKLARGAAVASGFD 159 (189) T ss_dssp ---EEEECSSCCCTTSEEEEEEEEETTEEEEEETTSCCEEEECCSSCCC--CCCCSCEEESCCSCGGGSCGGGCCCSBCE T ss_pred ---EEEeCCCcccCCCeEEEEEEEeCCEEEEEECCCceeeeEcCCCcce--ecCCCCEEECccCChhhcccccccCCCCe Confidence 2333466788999999999999999999999987655443322212 234567999864211 124699 Q ss_pred eeeeeeEEe Q FBpp0290335 214 GYLEKINVY 222 (971) Q Consensus 214 G~LQ~L~I~ 222 (971) |-|++|+|. T Consensus 160 GCi~~v~i~ 168 (189) T 3pve_A 160 GAIQLVSLR 168 (189) T ss_dssp EEEEEEEET T ss_pred EEeeEEEEC Confidence 999999985No 14>1pz7_A Agrin; structural protein; 1.42A {Gallus gallus} SCOP: b.29.1.4 PDB: 1pz8_A 1pz9_A 1q56_A Probab=98.65 E-value=4.2e-07 Score=94.30 Aligned_cols=125 Identities=13% Similarity=0.185 Sum_probs=85.5 Q ss_pred ceEEEEEEeecCCCCceEEEEEeCCCCeEEEEEEEcccccCceeEEEEEEecCCCcceeEeeecccCCCccceEEEEEEe Q FBpp0290335 87 EFAILITFRQSSLKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLASFGVAHVPDKWNSIALQVL 166 (971) Q Consensus 87 eFSilaT~R~~~~~~g~LfsV~~~~~~~~qlgl~lsg~~~~~~~i~L~Y~~~~~~~~~~~~sF~v~l~dg~WHrlaLsV~ 166 (971) +|+|.+.||... ..+.||...+..+...+|.|+|..-. +.|.|...+.. ..+.....+.|++||+|++... T Consensus 49 ~~~is~~frT~~-~~GlLl~~~~~~~~~d~~~l~l~~G~-----l~~~~~~g~g~---~~l~s~~~v~Dg~WH~V~v~~~ 119 (204) T 1pz7_A 49 SNHFELSIKTEA-TQGLILWSGKGLERSDYIALAIVDGF-----VQMMYDLGSKP---VVLRSTVPINTNHWTHIKAYRV 119 (204) T ss_dssp EEEEEEEEEECC-SSEEEEEESCCSTTCCEEEEEEETTE-----EEEEEESSSCC---EEEEEEEECCSSSCEEEEEEEE T ss_pred ceEEEEEEEeCC-CCeEEEEecCCCCCCceEEEEEECCE-----EEEEEECCCCe---EEEECCccccCCCcEEEEEEEE Confidence 788999999754 45677766543235678888886542 77777544332 2233456788999999999999 Q ss_pred CCeeEEEEcccccceeeeccCCcccccCCCceEEEeccCCc---------cCcccceeeeeeEEe Q FBpp0290335 167 SDKVSFYYDCELRNTTLVTREPIELVFDSASTLYIGQAGSI---------IGGKFEGYLEKINVY 222 (971) Q Consensus 167 g~~VtLyvDC~~~~t~~l~r~p~~l~~~~~~~l~IGq~g~~---------~~~~F~G~LQ~L~I~ 222 (971) +..++||||+....+...+..... ++....||||..... ....|.|-|++|+|. T Consensus 120 ~~~~~L~VD~~~~~~~~~~~~~~~--l~~~~~l~lGG~~~~~~~~~~~~~~~~~F~GCi~~v~in 182 (204) T 1pz7_A 120 QREGSLQVGNEAPITGSSPLGATQ--LDTDGALWLGGMERLSVAHKLPKAYSTGFIGCIRDVIVD 182 (204) T ss_dssp TTEEEEEETTSCCEEEECCSSCCC--EEECCEEEESSCSCCSTTTTSCGGGGSBCEEEEEEEEET T ss_pred eCEEEEEECCeeeEeeecCCCcce--ecCCCCEEECCCCccccccccccccCCCCeEEEeEEEEC Confidence 999999999988655433332222 334568999864211 123699999999984No 15>3flp_A SAP-like pentraxin; physiological doubly-stacked heptamer, pentraxin fold, cyclic heptamer, invertebrate lectin, sugar binding protein; 2.30A {Limulus polyphemus} PDB: 3flr_A 3flt_A Probab=98.60 E-value=1.4e-06 Score=90.53 Aligned_cols=158 Identities=15% Similarity=0.167 Sum_probs=101.7 Q ss_pred CcceEecCC---ccccCCccccCCCCCCceEEEEEEeecCCCCceEEEEEeCCCCeEEEEEEEcccccCceeEEEEEEec Q FBpp0290335 62 FPAFRFLQT---ADVKSPYRMLLPEKLYEFAILITFRQSSLKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQA 138 (971) Q Consensus 62 ~pAy~f~~~---a~l~~pt~~lfP~~l~eFSilaT~R~~~~~~g~LfsV~~~~~~~~qlgl~lsg~~~~~~~i~L~Y~~~ 138 (971) ..|+.|... ..+..+....|+ ...+|+|.++||+.......||+..+. .....|.|.+....... ..|.+... T Consensus 6 ~~al~F~G~s~~~yv~~~~~~~l~-~~~~fTi~~Wvk~~~~~~~~i~s~~~~-~~~~~~~l~~~~~~~~~--~~~~~~~~ 81 (217) T 3flp_A 6 DVKISFPGTQNPKFPHLRFMQTLP-AVRQLTVCQRIKPFHRNTGYIFSCATS-NQDNQFITSMYVKSDGT--LNLGLQVN 81 (217) T ss_dssp GEEEEECCCBTTBCCEEEESSCBC-CBSEEEEEEEEEESCSSCEEEEEEEET-TEEEEEEEEEEECTTSE--EEEEEEET T ss_pred CeEEECCCCCccCeEEeccCCCCC-CcCeEEEEEEEEeCCCCCcEEEEEECC-CCCCeEEEEEccCCCcc--eEEEEEEC Confidence 457778754 445555443343 234999999999977556779998875 33456666665431111 22333333 Q ss_pred CCCcceeEeeecccCCCccceEEEEEEeCC--eeEEEEccccccee-eeccCCcccccCCCceEEEeccCCc------cC Q FBpp0290335 139 DQNIGRKLASFGVAHVPDKWNSIALQVLSD--KVSFYYDCELRNTT-LVTREPIELVFDSASTLYIGQAGSI------IG 209 (971) Q Consensus 139 ~~~~~~~~~sF~v~l~dg~WHrlaLsV~g~--~VtLyvDC~~~~t~-~l~r~p~~l~~~~~~~l~IGq~g~~------~~ 209 (971) +.. ...+.....+.+++||+|++...+. .++||||.+++.+. .+... ..+.....++||+.... .. T Consensus 82 g~~--~~~~~~~~~~~~~~W~hva~t~d~~~g~~~lYvnG~~~~~~~~~~~~---~~~~~~~~l~iG~~~~~~gg~~~~~ 156 (217) T 3flp_A 82 ASS--NKYISCPIEIELGQWYHVCHVWSGVDGRMAVYANGSPCGTMENVGKG---HQISAGGTVVIGQEQDKIGGGFEEQ 156 (217) T ss_dssp TCC--CEEEEEEEECCTTSCEEEEEEEETTTTEEEEEETTEEEEEESCSSTT---CCBCSCBEEEESSCCSBTTBCCCGG T ss_pred Ccc--ceEEecCCccCCCCEEEEEEEEECCCCeEEEEECCEEcccccccCcC---cEeCCCCeEEECcccccCCCCcCcC Confidence 322 1223335567899999999999975 89999999998764 22221 11345678999986321 23 Q ss_pred cccceeeeeeEEecCCccc Q FBpp0290335 210 GKFEGYLEKINVYGNPDAI 228 (971) Q Consensus 210 ~~F~G~LQ~L~I~~dp~~a 228 (971) ..|.|.|.+|+|+-.+..+ T Consensus 157 ~~f~G~idevri~~~aLs~ 175 (217) T 3flp_A 157 ESWSGELSDLQVWDEALTT 175 (217) T ss_dssp GCCCEEEEEEEEESSCCCH T ss_pred CCceEEeeeEEEECccCCH Confidence 5799999999999776544No 16>4avs_A Serum amyloid P-component; sugar binding protein, glycoprotein, disulfide bond, lectin, metal-binding; HET: NAG N7P; 1.40A {Homo sapiens} SCOP: b.29.1.5 PDB: 1lgn_A* 1gyk_A 2a3w_A* 2a3x_A* 2a3y_A* 1sac_A* 3d5o_A* 2w08_A* 3kqr_A* 4avt_A* 4avv_A* 4ayu_A* Probab=98.58 E-value=1.5e-06 Score=89.53 Aligned_cols=150 Identities=15% Similarity=0.082 Sum_probs=97.9 Q ss_pred CcceEecCCc---cccCCccccCCCCCCceEEEEEEeecCCCCceEEEEEeCCCCeEEEEEEEcccccCceeEEEEEEec Q FBpp0290335 62 FPAFRFLQTA---DVKSPYRMLLPEKLYEFAILITFRQSSLKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQA 138 (971) Q Consensus 62 ~pAy~f~~~a---~l~~pt~~lfP~~l~eFSilaT~R~~~~~~g~LfsV~~~~~~~~qlgl~lsg~~~~~~~i~L~Y~~~ 138 (971) ..|+.|.... .+..+.. ++....+|+|.+++|+.......||+..+. .....|.|.+... ++ +.|.. . T Consensus 6 G~al~F~g~~~~~yv~~~~~--~~~~~~~fTi~~Wvk~~~~~~~~i~s~~~~-~~~~~~~l~~~~~--~~--~~~~~--~ 76 (204) T 4avs_A 6 GKVFVFPRESVTDHVNLITP--LEKPLQNFTLCFRAYSDLSRAYSLFSYNTQ-GRDNELLVYKERV--GE--YSLYI--G 76 (204) T ss_dssp TEEEEECSCCSSCEEEECCC--CCSCBSEEEEEEEEECCCCSCEEEEEEEET-TEEEEEEEEEEET--TE--EEEEE--T T ss_pred ccEEECCCCCCCCeEEEecC--CCCCccCEEEEEEEEcCCCCCcEEEEEEcC-CCCceEEEEEeCC--Ce--EEEEE--C Confidence 3566776442 2333221 222234999999999877677889998875 3334566655332 12 44443 2 Q ss_pred CCCcceeEeeecccCCCccceEEEEEEeCC--eeEEEEcccccceeeeccCCcccccCCCceEEEeccCCc------cCc Q FBpp0290335 139 DQNIGRKLASFGVAHVPDKWNSIALQVLSD--KVSFYYDCELRNTTLVTREPIELVFDSASTLYIGQAGSI------IGG 210 (971) Q Consensus 139 ~~~~~~~~~sF~v~l~dg~WHrlaLsV~g~--~VtLyvDC~~~~t~~l~r~p~~l~~~~~~~l~IGq~g~~------~~~ 210 (971) + ..+.+...+.+++||+|++...+. .++||||.+++.+..+... ..+.....++||+.... ... T Consensus 77 ~-----~~~~~~~~~~~~~W~Hva~t~d~~~g~~~lYvnG~~~~~~~~~~~---~~~~~~~~l~iG~~~~~~gg~~~~~~ 148 (204) T 4avs_A 77 R-----HKVTSKVIEKFPAPVHICVSWESSSGIAEFWINGTPLVKKGLRQG---YFVEAQPKIVLGQEQDSYGGKFDRSQ 148 (204) T ss_dssp T-----EEEEEECCCCSSCCEEEEEEEETTTCEEEEEETTEECCCEECCTT---CCBCSSCEEEESSCCSSSSCCCCGGG T ss_pred C-----EEEEecccccCCCEEEEEEEEECCCCeEEEEECCeEecccccCCC---ceECCCceEEEcccccccCccccCCc Confidence 2 123345677899999999999975 8999999999887544331 11345678999976311 135 Q ss_pred ccceeeeeeEEecCCccc Q FBpp0290335 211 KFEGYLEKINVYGNPDAI 228 (971) Q Consensus 211 ~F~G~LQ~L~I~~dp~~a 228 (971) .|.|.|.+|+|+..+..+ T Consensus 149 ~f~G~idevri~~~aLs~ 166 (204) T 4avs_A 149 SFVGEIGDLYMWDSVLPP 166 (204) T ss_dssp CCCEEEEEEEEESSCCCH T ss_pred cceEEeceeEEECccCCH Confidence 799999999999776543No 17>2h0b_A Neurexin-1-alpha; B-sandwich, cell adhesion; 2.10A {Bos taurus} SCOP: b.29.1.4 Probab=98.56 E-value=1.2e-06 Score=89.19 Aligned_cols=127 Identities=17% Similarity=0.273 Sum_probs=85.8 Q ss_pred ceEEEEEEeecCCCCceEEEEEeCCCCeEEEEEEEcccccCceeEEEEEEecCCCcceeEee-ecccCCCccceEEEEEE Q FBpp0290335 87 EFAILITFRQSSLKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLAS-FGVAHVPDKWNSIALQV 165 (971) Q Consensus 87 eFSilaT~R~~~~~~g~LfsV~~~~~~~~qlgl~lsg~~~~~~~i~L~Y~~~~~~~~~~~~s-F~v~l~dg~WHrlaLsV 165 (971) +|+|.+.||... ..+.||.. . +...+|.|+|..-. +.|.|...+... ...+. -...+.|++||+|++.. T Consensus 29 ~~~i~l~frT~~-~~GlLl~~-~--~~~d~~~l~l~~G~-----l~~~~~~g~g~~-~~~~~~~~~~l~Dg~WH~V~v~~ 98 (184) T 2h0b_A 29 SDEITLSFKTLQ-RNGLMLHT-G--KSADYVNLALKNGA-----VSLVINLGSGAF-EALVEPVNGKFNDNAWHDVKVTR 98 (184) T ss_dssp EEEEEEEEEESC-SCEEEEEE-C--CTTEEEEEEEETTE-----EEEEEEESSCEE-EEEECCSSSCSSSSSCEEEEEEE T ss_pred ccEEEEEEEeCC-CCEEEEEe-c--CCCCEEEEEEECCE-----EEEEEECCCCeE-EEEEccCCCcccCCCeEEEEEEE Confidence 789999999765 55688765 2 35678888886542 677776543321 11121 25678899999999999 Q ss_pred eCCeeEEEEcccccceeeeccCCcccccCCCceEEEeccCCc-------cCcccceeeeeeEEecCC Q FBpp0290335 166 LSDKVSFYYDCELRNTTLVTREPIELVFDSASTLYIGQAGSI-------IGGKFEGYLEKINVYGNP 225 (971) Q Consensus 166 ~g~~VtLyvDC~~~~t~~l~r~p~~l~~~~~~~l~IGq~g~~-------~~~~F~G~LQ~L~I~~dp 225 (971) .+..++||||+....+......... ++....||||..... ....|.|-|++|+|.-.+ T Consensus 99 ~~~~~~L~VD~~~~~~~~~~~~~~~--l~~~~~l~iGG~~~~~~~~~~~~~~~F~GCi~~v~i~~~~ 163 (184) T 2h0b_A 99 NLRQVTISVDGILTTTGYTQEDYTM--LGSDDFFYVGGSPSTADLPGSPVSNNFMGCLKEVVYKNND 163 (184) T ss_dssp ETTEEEEEETTTEEEEEECSTTCCC--EEECSEEEESCCTTGGGSTTCSCCCBCEEEEEEEEEEESS T ss_pred eCCEEEEEECCeeeeeeeCCCCcee--ecCCCCEEECCCCccccccCCcccCCCEEEeeEEEECCEE Confidence 9999999999988655433321112 233567999865221 124699999999996543No 18>3pvn_A C-reactive protein; pentraxin family, immune system; 1.98A {Homo sapiens} SCOP: b.29.1.5 PDB: 1gnh_A 1lj7_A 3l2y_A 1b09_A 3pvo_A Probab=98.55 E-value=1.9e-06 Score=88.82 Aligned_cols=150 Identities=17% Similarity=0.152 Sum_probs=97.5 Q ss_pred CcceEecCC---ccccCCccccCCCCCCceEEEEEEeecCC--CCceEEEEEeCCCCeEEEEEEEcccccCceeEEEEEE Q FBpp0290335 62 FPAFRFLQT---ADVKSPYRMLLPEKLYEFAILITFRQSSL--KGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYT 136 (971) Q Consensus 62 ~pAy~f~~~---a~l~~pt~~lfP~~l~eFSilaT~R~~~~--~~g~LfsV~~~~~~~~qlgl~lsg~~~~~~~i~L~Y~ 136 (971) ..|+.|... ..+..+... +....+|+|.+++|+... ....||+..+. .....|.|.+... ++ +.|.. T Consensus 6 g~al~F~g~s~~~yv~~~~~~--~~~~~~fTi~~Wvk~~~~~~~~~~i~s~~~~-~~~~~~~l~~~~~--~~--~~~~~- 77 (206) T 3pvn_A 6 RKAFVFPKESDTSYVSLKAPL--TKPLKAFTVCLHFYTELSSTRGYSIFSYATK-RQDNEILIFWSKD--IG--YSFTV- 77 (206) T ss_dssp TEEEEECSCCSSCEEEECCCC--CSCBSEEEEEEEEEESGGGTCCEEEEEEEET-TEEEEEEEEEETT--TE--EEEEE- T ss_pred CCEEECCCCCccCeEEEcCCC--CCChhcEEEEEEEEeCCCCCCCcEEEEEECC-CCCCEEEEEEeCC--CE--EEEEE- Confidence 356777754 223333222 222349999999999754 67789998875 3344566655432 12 44433 Q ss_pred ecCCCcceeEeeecccCCCccceEEEEEEeCC--eeEEEEcccccceeeeccCCcccccCCCceEEEeccCC------cc Q FBpp0290335 137 QADQNIGRKLASFGVAHVPDKWNSIALQVLSD--KVSFYYDCELRNTTLVTREPIELVFDSASTLYIGQAGS------II 208 (971) Q Consensus 137 ~~~~~~~~~~~sF~v~l~dg~WHrlaLsV~g~--~VtLyvDC~~~~t~~l~r~p~~l~~~~~~~l~IGq~g~------~~ 208 (971) .+ ....+...+.+++||+|++...+. .++||||.+++.+..+... ..+.....++||+... .. T Consensus 78 -~~-----~~~~~~~~~~~~~W~hva~t~d~~~g~~~lYvnG~~~~~~~~~~~---~~~~~~~~l~iG~~~~~~gg~~~~ 148 (206) T 3pvn_A 78 -GG-----SEILFEVPEVTVAPVHICTSWESASGIVEFWVDGKPRVRKSLKKG---YTVGAEASIILGQEQDSFGGNFEG 148 (206) T ss_dssp -TT-----EEEEEECSSCCSSCEEEEEEEETTTCEEEEEETTEECCCEECCTT---CCBCSSCEEEESSCCSBTTBCCCG T ss_pred -CC-----eeeEeecccCCCCcEEEEEEEECCCceEEEEECCcCcccccccCC---ceECCCCEEEEeeccccCCCCccc Confidence 22 123345677899999999999975 8999999999887544331 1134567899997631 12 Q ss_pred CcccceeeeeeEEecCCccc Q FBpp0290335 209 GGKFEGYLEKINVYGNPDAI 228 (971) Q Consensus 209 ~~~F~G~LQ~L~I~~dp~~a 228 (971) ...|.|.|.+|+|+..+... T Consensus 149 ~~~f~G~idevri~~~aLs~ 168 (206) T 3pvn_A 149 SQSLVGDIGNVNMWDFVLSP 168 (206) T ss_dssp GGCCCEEEEEEEEESSCCCH T ss_pred ccceEEEecceEEEcccCCH Confidence 35799999999999766443No 19>3bod_A Neurexin-1-alpha; neurexin1D, LNS6, alternative splicing, calcium, cell adhesion, EGF-like domain, glycoprotein, membrane, metal- binding; 1.70A {Mus musculus} SCOP: b.29.1.4 PDB: 3vkf_C* 2xb6_C* 2wqz_C* 1c4r_A 3bop_A 3mw4_A* Probab=98.50 E-value=2.6e-06 Score=86.74 Aligned_cols=124 Identities=16% Similarity=0.184 Sum_probs=85.4 Q ss_pred ceEEEEEEeecCCCCceEEEEEeCCCCeEEEEEEEcccccCceeEEEEEEecCCCcceeEeeecccCCCccceEEEEEEe Q FBpp0290335 87 EFAILITFRQSSLKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLASFGVAHVPDKWNSIALQVL 166 (971) Q Consensus 87 eFSilaT~R~~~~~~g~LfsV~~~~~~~~qlgl~lsg~~~~~~~i~L~Y~~~~~~~~~~~~sF~v~l~dg~WHrlaLsV~ 166 (971) .++|.+.||.. ...+.||...+..+...+|.|+|..-. +.|.|...+... .+......+.|++||+|.+... T Consensus 30 ~~~isl~frT~-~~~GlLl~~~~~~~~~d~l~l~L~~G~-----l~~~~~~g~~~~--~~~~~~~~l~Dg~WH~V~v~r~ 101 (178) T 3bod_A 30 ADRLAIGFSTV-QKEAVLVRVDSSSGLGDYLELHIHQGK-----IGVKFNVGTDDI--AIEESNAIINDGKYHVVRFTRS 101 (178) T ss_dssp EEEEEEEEECC-CSSEEEEEEEESSSSCCEEEEEEETTE-----EEEEEESSSCCE--EEECCSSCCCSSSCEEEEEEEE T ss_pred CCEEEEEEEEC-CCCEEEEEEcCCCCCCCEEEEEEECCE-----EEEEEEcCCCcE--EEecCCcccCCCCcEEEEEEEe Confidence 67888888865 456788888774234578888886542 777776543321 2212367788999999999999 Q ss_pred CCeeEEEEccccccee-eeccCCcccccCCCceEEEeccCCccCcccceeeeeeEEe Q FBpp0290335 167 SDKVSFYYDCELRNTT-LVTREPIELVFDSASTLYIGQAGSIIGGKFEGYLEKINVY 222 (971) Q Consensus 167 g~~VtLyvDC~~~~t~-~l~r~p~~l~~~~~~~l~IGq~g~~~~~~F~G~LQ~L~I~ 222 (971) +..++|+||+....+. ..+... ..++....||||... ....|+|-|++|+|- T Consensus 102 ~~~~~L~VD~~~~~~~~~~~~~~--~~l~~~~~l~iGG~~--~~~~F~GCi~~v~in 154 (178) T 3bod_A 102 GGNATLQVDSWPVIERYPAGRQL--TIFNSQATIIIGGKE--QGQPFQGQLSGLYYN 154 (178) T ss_dssp TTEEEEEETTSCCEEECCCSCCC--CCBCCEEEEEESCCT--TSCBCCEEEEEEEET T ss_pred CCEEEEEECCceeeeEecCCCcc--eEecCCCCEEEeCcc--CCCCCeEEEceEEEC Confidence 9999999999875432 233221 123445679999652 235799999999984No 20>2r16_A Neurexin-1-alpha; beta-sandwich, cell adhesion, splicing; 1.04A {Bos taurus} Probab=98.49 E-value=2.3e-06 Score=87.23 Aligned_cols=123 Identities=15% Similarity=0.208 Sum_probs=85.7 Q ss_pred ceEEEEEEeecCCCCceEEEEEeCCCCeEEEEEEEcccccCceeEEEEEEecCCCcceeEeeecccCCCccceEEEEEEe Q FBpp0290335 87 EFAILITFRQSSLKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLASFGVAHVPDKWNSIALQVL 166 (971) Q Consensus 87 eFSilaT~R~~~~~~g~LfsV~~~~~~~~qlgl~lsg~~~~~~~i~L~Y~~~~~~~~~~~~sF~v~l~dg~WHrlaLsV~ 166 (971) +|+|.+.||.. ...+.||...+. +...+|.|+|..-. +.|.|...+.. ..+.....+.|++||+|.+... T Consensus 28 ~~~isl~frT~-~~~GlLl~~~~~-~~~d~l~l~L~~G~-----l~~~~~~g~~~---~~~~~~~~l~Dg~WH~V~v~~~ 97 (182) T 2r16_A 28 AEDVSLRFRSQ-RAYGILMATTSR-DSADTLRLELDAGR-----VKLTVNLGKGP---ETLFAGYNLNDNEWHTVRVVRR 97 (182) T ss_dssp EEEEEEEEECS-CSSEEEEEEECS-SSCCEEEEEEETTE-----EEEEEESSSCC---EEEEECSSCCSSSCEEEEEEEE T ss_pred ccEEEEEEEeC-CCCEEEEEcCCC-CCCCEEEEEEECCE-----EEEEEEcCCcc---eEeccCCcccCCCcEEEEEEEE Confidence 78888999876 456789988874 34578888886542 67777654322 2233467888999999999999 Q ss_pred CCeeEEEEcccccceeeeccCCcccccCCCceEEEeccCC-----ccCcccceeeeeeEEe Q FBpp0290335 167 SDKVSFYYDCELRNTTLVTREPIELVFDSASTLYIGQAGS-----IIGGKFEGYLEKINVY 222 (971) Q Consensus 167 g~~VtLyvDC~~~~t~~l~r~p~~l~~~~~~~l~IGq~g~-----~~~~~F~G~LQ~L~I~ 222 (971) +..++|+||+....+...+.....++++ .||+|-... .....|+|-|++|+|- T Consensus 98 ~~~~~L~VD~~~~~~~~~~~~~~~l~~~---~l~~Gg~~~~~~~~~~~~~F~GCi~~v~in 155 (182) T 2r16_A 98 GKSLKLTVDDQQAMTGQMAGDHTRLEFH---NIETGIITERRYLSSVPSNFIGHLQSLTFN 155 (182) T ss_dssp TTEEEEEETTCCEEEEECCSSCCCEEEE---EEEESSCCCCTTCSSCCCCCEEEEEEEEET T ss_pred CCEEEEEEeCCceeeEEcCCCCcEEEec---ceEEcCcccccccCCCCCCCEEEEeEEEEC Confidence 9999999999987554444322233332 288874311 1124699999999984No 21>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus} Probab=98.27 E-value=1.1e-05 Score=92.75 Aligned_cols=125 Identities=15% Similarity=0.154 Sum_probs=85.8 Q ss_pred ceEEEEEEeecCCCCceEEEEEeCCCCeEEEEEEEcccccCceeEEEEEEecCCCcceeEeee-cccCCCccceEEEEEE Q FBpp0290335 87 EFAILITFRQSSLKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLASF-GVAHVPDKWNSIALQV 165 (971) Q Consensus 87 eFSilaT~R~~~~~~g~LfsV~~~~~~~~qlgl~lsg~~~~~~~i~L~Y~~~~~~~~~~~~sF-~v~l~dg~WHrlaLsV 165 (971) .+.|.+.||.. ...+.||.+.+......+|.|.|..- + +.|.|...... ..+.+ ...+.||+||+|.|.. T Consensus 250 ~~~isl~frT~-~~~GlLl~~~~~~~~~~~l~l~l~~G---~--l~~~~~~g~~~---~~~~~~~~~l~DG~WH~V~v~~ 320 (410) T 3asi_A 250 ADRLAIGFSTV-QKEAVLVRVDSSSGLGDYLELHIHQG---K--IGVKFNVGTDD---IAIEESNAIINDGKYHVVRFTR 320 (410) T ss_dssp EEEEEEEEECC-CSEEEEEEEEECTTCCCEEEEEEETT---E--EEEEEESSSSC---EEEECCSCCCCSSSCEEEEEEE T ss_pred ccEEEEEEEec-CCCeEEEEEecCCCCCcEEEEEEeCC---E--EEEEEECCCCC---eEEccCCcCCCCCCeEEEEEEE Confidence 45666677643 45678998877533457888888643 2 67777544321 23333 5778899999999999 Q ss_pred eCCeeEEEEcccccceeeeccCCcccccCCCceEEEeccCCccCcccceeeeeeEEec Q FBpp0290335 166 LSDKVSFYYDCELRNTTLVTREPIELVFDSASTLYIGQAGSIIGGKFEGYLEKINVYG 223 (971) Q Consensus 166 ~g~~VtLyvDC~~~~t~~l~r~p~~l~~~~~~~l~IGq~g~~~~~~F~G~LQ~L~I~~ 223 (971) .+..++|+|||..+.+....... ...++....||||.. .....|+|-|++|+|-. T Consensus 321 ~~~~~~L~VD~~~~~~~~~~~~~-~~~l~~~~~l~lGg~--~~~~~F~Gci~~v~in~ 375 (410) T 3asi_A 321 SGGNATLQVDSWPVIERYPAGRQ-LTIFNSQATIIIGGK--EQGQPFQGQLSGLYYNG 375 (410) T ss_dssp ETTEEEEEETTSCCEEECCSSCC-CCCBCCEEEEEESST--TTTCCCCEEEEEEEETT T ss_pred ECCEEEEEECCccceeecCCCcc-cEEecCCceEEEcCC--cCCCCCEEEEEEEEECC Confidence 99999999999887654222111 112455678999965 23468999999999854No 22>2v73_A CBM40, putative EXO-alpha-sialidase; carbohydrate-binding module, bacterial pathogen, sialic acid, sugar-binding protein; HET: SIA; 2.2A {Clostridium perfringens} Probab=98.23 E-value=3.9e-05 Score=79.31 Aligned_cols=136 Identities=16% Similarity=0.143 Sum_probs=87.3 Q ss_pred CCceEEEEEEeecCCCCceEEEEEeCCCCeEEEEEEEcccccCceeEEEEEEecCCCccee-EeeecccCCCccceEEEE Q FBpp0290335 85 LYEFAILITFRQSSLKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRK-LASFGVAHVPDKWNSIAL 163 (971) Q Consensus 85 l~eFSilaT~R~~~~~~g~LfsV~~~~~~~~qlgl~lsg~~~~~~~i~L~Y~~~~~~~~~~-~~sF~v~l~dg~WHrlaL 163 (971) +.+|+|.++||+.......||++.+......+|.|.+... .+.|............ .....+.+.+ +||+|++ T Consensus 39 l~~fTvs~Wvk~~~~~~~~lfs~~~~~~~~~~~~l~~~~g-----~l~~~~~~~~~~~~~~~~~~~~~~~~~-~W~Hva~ 112 (191) T 2v73_A 39 LEEGTIVTRFNMNDTSIQSLIGLSDGNKANNYFSLYVSGG-----KVGYELRRQEGNGDFNVHHSADVTFNR-GINTLAL 112 (191) T ss_dssp CSSEEEEEEEEECCCSCEEEEEEECTTCSSCEEEEEECSS-----EEEEEEEECTTSSCEEEEEEEECCCCS-SCEEEEE T ss_pred CCCEEEEEEEEeCCCCceEEEEecCCCCcCcEEEEEEECC-----EEEEEEEecCCCcceeeecccccccCC-ceEEEEE Confidence 4599999999998755567999987644445677777622 2556555443221111 1112333344 9999999 Q ss_pred EEeC-CeeEEEEcccccceeeeccCCcccccCCCceEEEeccCCc---cCcccceeeeeeEEecCCcc Q FBpp0290335 164 QVLS-DKVSFYYDCELRNTTLVTREPIELVFDSASTLYIGQAGSI---IGGKFEGYLEKINVYGNPDA 227 (971) Q Consensus 164 sV~g-~~VtLyvDC~~~~t~~l~r~p~~l~~~~~~~l~IGq~g~~---~~~~F~G~LQ~L~I~~dp~~ 227 (971) ...+ ..++||||-+++.+...........+ ....++||+.... ....|.|.|.+|+|+..+.. T Consensus 113 t~d~~~~~~lYvnG~~~~~~~~~~~~~~~~~-~~~~~~iG~~~~~~g~~~~~f~G~Idevri~~~aLs 179 (191) T 2v73_A 113 KIEKGIGAKIFLNGSLVKTVSDPNIKFLNAI-NLNSGFIGKTDRANGYNEYLFRGNIDFMNIYDKPVS 179 (191) T ss_dssp EEETTTEEEEEETTEEEEEEECTTCCCGGGS-CCCEEEESSCCCCSSSCCCCCCEEEEEEEEESSCCC T ss_pred EEeCCCcEEEEECCEEeeeeccCCccccccc-CCceEEECCCCCCCCccCcCCceEEeEEEEECCcCC Confidence 9997 78999999998877654321000111 3457999975321 12369999999999965543No 23>4c1w_A Neuraminidase; sugar binding protein, carbohydrate-binding module, sialic A binding; HET: SLT; 1.84A {Streptococcus pneumoniae} PDB: 4c1x_A* Probab=98.22 E-value=1.5e-05 Score=81.43 Aligned_cols=135 Identities=15% Similarity=0.126 Sum_probs=86.3 Q ss_pred CceEEEEEEeecC--CCCceEEEEEeCCCCeEEEEEEEcccccCceeEEEEEEecCCCcc-eeEeeecccCCCccceEEE Q FBpp0290335 86 YEFAILITFRQSS--LKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIG-RKLASFGVAHVPDKWNSIA 162 (971) Q Consensus 86 ~eFSilaT~R~~~--~~~g~LfsV~~~~~~~~qlgl~lsg~~~~~~~i~L~Y~~~~~~~~-~~~~sF~v~l~dg~WHrla 162 (971) .+|+|.+++|+.. .....||++.+......+|.|.+.... ..|.+....+... ...+.-...+.+++||+|+ T Consensus 33 ~~fTv~~Wvk~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~-----~~~~~~~~~g~~~~~~~~~~~~~~~~g~W~Hva 107 (188) T 4c1w_A 33 ENATVHMEFKPDAKAPAFYNLFSVSSATKKDEYFTMAVYNNT-----ATLEGRGSDGKQFYNNYNDAPLKVKPGQWNSVT 107 (188) T ss_dssp SSEEEEEEEEECSSCCSEEEEEEEECSSCTTCEEEEEEETTE-----EEEEEECTTCCBSSCCCTTCSCBCCTTSCEEEE T ss_pred CCeEEEEEEECCCCCCCccEEEEccCCcccCceEEEEEeCCc-----cEEEEEECCCCeEeccccccccccCCCCEEEEE Confidence 4999999999976 455679998875433356777776542 2344433322110 0011113456789999999 Q ss_pred EEEeC-------CeeEEEEccccccee-eeccCCcccccCCCceEEEeccCCc--cCcccceeeeeeEEecCCcc Q FBpp0290335 163 LQVLS-------DKVSFYYDCELRNTT-LVTREPIELVFDSASTLYIGQAGSI--IGGKFEGYLEKINVYGNPDA 227 (971) Q Consensus 163 LsV~g-------~~VtLyvDC~~~~t~-~l~r~p~~l~~~~~~~l~IGq~g~~--~~~~F~G~LQ~L~I~~dp~~ 227 (971) +...+ ..++||||.+++.+. ...... ..+.....++||+.... ....|.|.|.+|+|+..+.. T Consensus 108 ~t~d~~~~~~~~~~~~lYvnG~~~~~~~~~~~~~--~~~~~~~~~~iG~~~~~g~~~~~f~G~idevriy~~aLs 180 (188) T 4c1w_A 108 FTVEKPTAELPKGRVRLYVNGVLSRTSLRSGNFI--KDMPDVTHVQIGATKRANNTVWGSNLQIRNLTVYNRALT 180 (188) T ss_dssp EEEECCCSSSTTCEEEEEETTEEEEEECSCCCCG--GGCTTCCEEEEESEEETTEEECCCCEEEEEEEEESSCCC T ss_pred EEEeCCcccCCCceEEEEECCEEeeeeeccCCcc--ccCCCCccEEECccccCCCcccccccEEeeEEEECCcCC Confidence 99999 899999999998774 222211 11233567999975211 11259999999999965543No 24>1d2s_A SHBG, sex hormone-binding globulin; steroid transport, laminin G-like domain, jellyroll, androgen binding protein (ABP); HET: DHT; 1.55A {Homo sapiens} SCOP: b.29.1.4 PDB: 1kdk_A* 1kdm_A* Probab=98.19 E-value=2.7e-05 Score=78.58 Aligned_cols=121 Identities=11% Similarity=0.011 Sum_probs=82.3 Q ss_pred CceEEEEEEeecCCCCceEEEEEeCCCCeEEEEEEEcccccCceeEEEEEEecCCCcceeEeeecccCCCccceEEEEEE Q FBpp0290335 86 YEFAILITFRQSSLKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLASFGVAHVPDKWNSIALQV 165 (971) Q Consensus 86 ~eFSilaT~R~~~~~~g~LfsV~~~~~~~~qlgl~lsg~~~~~~~i~L~Y~~~~~~~~~~~~sF~v~l~dg~WHrlaLsV 165 (971) .+|+|.+.||... ..+.||...+. +...+|.|+|..-. +.|.|...+. ...+.....+.|++||+|.|.. T Consensus 26 ~~~~isl~frT~~-~~GlLl~~~~~-~~~d~l~l~L~~G~-----l~~~~~~g~~---~~~~~~~~~v~DG~WH~V~v~~ 95 (170) T 1d2s_A 26 TKTSSSFEVRTWD-PEGVIFYGDTN-PKDDWFMLGLRDGR-----PEIQLHNHWA---QLTVGAGPRLDDGRWHQVEVKM 95 (170) T ss_dssp CCCEEEEEEEESC-SSEEEEEEEEE-TTTEEEEEEEETTE-----EEEEEESSSC---EEEEECSCCCCSSSCEEEEEEE T ss_pred CCcEEEEEEEECC-CCEEEEEeCCC-CCCCEEEEEEECCE-----EEEEEECCCc---cEEeeCCCccCCCCCEEEEEEE Confidence 3788888998764 45788887764 34578888886542 6777754432 1222236678899999999999 Q ss_pred eCCeeEEEEcccccceeeeccCCcccccCCCceEEEeccCC-------ccCcccceeeee-eEEe Q FBpp0290335 166 LSDKVSFYYDCELRNTTLVTREPIELVFDSASTLYIGQAGS-------IIGGKFEGYLEK-INVY 222 (971) Q Consensus 166 ~g~~VtLyvDC~~~~t~~l~r~p~~l~~~~~~~l~IGq~g~-------~~~~~F~G~LQ~-L~I~ 222 (971) .+..++|+||.+...+.. ..+. .....||||.... .....|+|=|++ ++|- T Consensus 96 ~~~~~~L~VD~~~~~~~~--~~~g----~~~~~lylGG~p~~~~~~~~~~~~~F~GCi~~~~~in 154 (170) T 1d2s_A 96 EGDSVLLEVDGEEVLRLR--QVSG----HPIMRIALGGLLFPASNLRLPLVPALDGCLRRDSWLD 154 (170) T ss_dssp ETTEEEEEETTEEEEEET--TCCC----CCEEEEEESSCSSCGGGSSSCCCCCCCEEEEEEEESC T ss_pred eCCEEEEEECCeeeeeec--cCCC----CcCCCEEECCccccccccccCCCCCeeEecccceecC Confidence 999999999998664421 1111 1246799986421 112469999999 7764No 25>2jd4_A Laminin subunit alpha-1; basement membrane protein, metal binding protein; 1.9A {Mus musculus} SCOP: b.29.1.0 Probab=98.09 E-value=4.4e-05 Score=86.75 Aligned_cols=124 Identities=15% Similarity=0.286 Sum_probs=83.8 Q ss_pred ceEEEEEEeecCCCCceEEEEEeCCCCeEEEEEEEcccccCceeEEEEEEecCCCcceeEeee----cccCCCccceEEE Q FBpp0290335 87 EFAILITFRQSSLKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLASF----GVAHVPDKWNSIA 162 (971) Q Consensus 87 eFSilaT~R~~~~~~g~LfsV~~~~~~~~qlgl~lsg~~~~~~~i~L~Y~~~~~~~~~~~~sF----~v~l~dg~WHrla 162 (971) +|+|.+.||.. ...+.||.+.+. ...+|.|.|.... +.|.|...... ....+ ...+.|++||+|. T Consensus 221 ~~~isl~frT~-~~~GlLl~~~~~--~~d~l~l~L~~G~-----l~~~~~~g~g~---~~~~~~~~~~~~l~DG~WH~V~ 289 (383) T 2jd4_A 221 DLQITLEFRTT-SKNGVLLGISSA--KVDAIGLEIVDGK-----VLFHVNNGAGR---ITATYQPRAARALCDGKWHTLQ 289 (383) T ss_dssp CEEEEEEEEES-CSCEEEEEEECS--SSCEEEEEEETTE-----EEEEEESSSCE---EEEEECCSSTTGGGSSSCEEEE T ss_pred ceEEEEEEEeC-CCCEEEEEecCC--CCCEEEEEEECCE-----EEEEEECCCCc---EEEEEecCCCccccCCCcEEEE Confidence 78888999865 556789987764 4468888886542 67777543321 22222 4577899999999 Q ss_pred EEEeCCeeEEEEcccccceeeeccCCcccccCCCceEEEeccCC-------ccCcccceeeeeeEEec Q FBpp0290335 163 LQVLSDKVSFYYDCELRNTTLVTREPIELVFDSASTLYIGQAGS-------IIGGKFEGYLEKINVYG 223 (971) Q Consensus 163 LsV~g~~VtLyvDC~~~~t~~l~r~p~~l~~~~~~~l~IGq~g~-------~~~~~F~G~LQ~L~I~~ 223 (971) |...+..++|+||+....+....... ..++....||||.... .....|+|-|++|+|.- T Consensus 290 v~~~~~~~~L~VD~~~~~~~~~~~~~--~~l~~~~~l~iGG~p~~~~~~~~~~~~~F~GCi~~v~in~ 355 (383) T 2jd4_A 290 AHKSKHRIVLTVDGNSVRAESPHTHS--TSADTNDPIYVGGYPAHIKQNSLSSRASFRGCVRNLRLSR 355 (383) T ss_dssp EEEETTEEEEEETTEEEEEC----CC--CCBCCCEEEEESCCCTTSCCTTCSCCCBCEEEEEEEEEC- T ss_pred EEEeCCEEEEEECCeeeccccCCccc--ccccCCCCEEEcCccCcccccccccCCCCceEeeeEEECC Confidence 99999999999999876554221111 1234567899986311 11246999999999964No 26>2r1d_A Neurexin-1-beta, neurexin I-beta; beta-sandwich, cell adhesion, splicing; 2.60A {Rattus norvegicus} SCOP: b.29.1.4 PDB: 3biw_E* Probab=98.09 E-value=5.9e-05 Score=80.05 Aligned_cols=124 Identities=15% Similarity=0.169 Sum_probs=84.6 Q ss_pred ceEEEEEEeecCCCCceEEEEEeCCCCeEEEEEEEcccccCceeEEEEEEecCCCcceeEeeecccCCCccceEEEEEEe Q FBpp0290335 87 EFAILITFRQSSLKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLASFGVAHVPDKWNSIALQVL 166 (971) Q Consensus 87 eFSilaT~R~~~~~~g~LfsV~~~~~~~~qlgl~lsg~~~~~~~i~L~Y~~~~~~~~~~~~sF~v~l~dg~WHrlaLsV~ 166 (971) .+.|.+.||.. ...+.||.+.+..+...+|.|+|..-. +.|.|...+.. ..+......+.|++||+|.|... T Consensus 64 ~~~isl~FrT~-~~~GlLl~~~~~~~~~dfl~L~L~~G~-----l~~~~~~G~~~--~~l~~~~~~l~DG~WH~V~v~r~ 135 (226) T 2r1d_A 64 ADRLAIGFSTV-QKEAVLVRVDSSSGLGDYLELHIHQGK-----IGVKFNVGTDD--IAIEESNAIINDGKYHVVRFTRS 135 (226) T ss_dssp EEEEEEEEECC-CSSEEEEEEEECTTCCCEEEEEEETTE-----EEEEEESSSCE--EEEECCSSCCCSSSCEEEEEEEE T ss_pred cCEEEEEEEEC-CCCeEEEEecCCCCCCCEEEEEEECCE-----EEEEEECCCCe--EEEecCCcCccCCCcEEEEEEEc Confidence 67777888865 456788888774234578888886542 77777654332 12212366788999999999999 Q ss_pred CCeeEEEEccccccee-eeccCCcccccCCCceEEEeccCCccCcccceeeeeeEEe Q FBpp0290335 167 SDKVSFYYDCELRNTT-LVTREPIELVFDSASTLYIGQAGSIIGGKFEGYLEKINVY 222 (971) Q Consensus 167 g~~VtLyvDC~~~~t~-~l~r~p~~l~~~~~~~l~IGq~g~~~~~~F~G~LQ~L~I~ 222 (971) +..++|+||.....+. ..+.... .++....||||-.. ....|+|-|++|+|- T Consensus 136 ~~~~~L~VD~~~~~~~~~~~~~~~--~l~~~~~l~lGG~p--~~~~F~GCi~~v~in 188 (226) T 2r1d_A 136 GGNATLQVDSWPVIERYPAGRQLT--IFNSQATIIIGGKE--QGQPFQGQLSGLYYN 188 (226) T ss_dssp TTEEEEEETTSCCEEECCSSCCCC--CBCSEEEEEESSTT--TTCCCCEEEEEEEET T ss_pred CCEEEEEECCeeeeeEecCCCcce--EEcCCCCEEEeccc--CCCCCEEEEeeEEEC Confidence 9999999999874332 2222211 23456679998652 235799999999984No 27>1f5f_A SHBG, sex hormone-binding globulin; jellyroll, signaling protein; HET: DHT; 1.70A {Homo sapiens} SCOP: b.29.1.4 PDB: 1lhw_A* 1lho_A* 1lhn_A* 1lhv_A* 1lhu_A* Probab=98.06 E-value=6.1e-05 Score=78.46 Aligned_cols=127 Identities=12% Similarity=0.040 Sum_probs=83.2 Q ss_pred CceEEEEEEeecCCCCceEEEEEeCCCCeEEEEEEEcccccCceeEEEEEEecCCCcceeEeeecccCCCccceEEEEEE Q FBpp0290335 86 YEFAILITFRQSSLKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLASFGVAHVPDKWNSIALQV 165 (971) Q Consensus 86 ~eFSilaT~R~~~~~~g~LfsV~~~~~~~~qlgl~lsg~~~~~~~i~L~Y~~~~~~~~~~~~sF~v~l~dg~WHrlaLsV 165 (971) .+|+|.+.||... ..+.||...+. +...+|.|+|..-. +.|.|..... ...+.-...+.|++||+|.|.. T Consensus 38 ~~~~is~~frT~~-~~GlLl~~~~~-~~~d~l~L~L~~G~-----l~~~~~~g~~---~~~~~s~~~vnDG~WH~V~l~~ 107 (205) T 1f5f_A 38 TKTSSSFEVRTWD-PEGVIFYGDTN-PKDDWFMLGLRDGR-----PEIQLHNHWA---QLTVGAGPRLDDGRWHQVEVKM 107 (205) T ss_dssp CCCEEEEEEEESC-SSEEEEEEEEE-TTTEEEEEEEETTE-----EEEEEESSSC---EEEEECSCCCCSSSCEEEEEEE T ss_pred CCcEEEEEEEECC-CCEEEEEeCCC-CCCCEEEEEEeCCE-----EEEEEECCCc---eEEEecCCccCCCCCEEEEEEE Confidence 3788888888765 45788877764 34578888886542 6777764421 1222235678899999999999 Q ss_pred eCCeeEEEEccccccee-eeccCCcccccCCCceEEEeccCC-------ccCcccceeeee-eEEec Q FBpp0290335 166 LSDKVSFYYDCELRNTT-LVTREPIELVFDSASTLYIGQAGS-------IIGGKFEGYLEK-INVYG 223 (971) Q Consensus 166 ~g~~VtLyvDC~~~~t~-~l~r~p~~l~~~~~~~l~IGq~g~-------~~~~~F~G~LQ~-L~I~~ 223 (971) .+..++|+||.....+. .... +..........||||-... .....|+|=|++ |+|-- T Consensus 108 ~~~~~~L~VD~~~~~~~~~~~~-~~~~~~~~~~~lyvGG~p~~~~~~~~~~~~~F~GCi~~~v~in~ 173 (205) T 1f5f_A 108 EGDSVLLEVDGEEVLRLRQVSG-PLTSKRHPIMRIALGGLLFPASNLRLPLVPALDGCLRRDSWLDK 173 (205) T ss_dssp ETTEEEEEETTEEEEEECSCCC-CC----CCEEEEEESSCSSCGGGSSSCCCCCCCEEEEEEECSCG T ss_pred eCCEEEEEECCccceeeecccC-ccccCCCcCccEEECCccCcccccccCCCCCccEEecccEEECC Confidence 99999999999876442 1111 1111112246799986421 112469999999 77743No 28>1dyk_A Laminin alpha 2 chain; metal binding protein; 2.0A {Mus musculus} SCOP: b.29.1.4 b.29.1.4 PDB: 1okq_A 1qu0_A Probab=98.00 E-value=6.9e-05 Score=85.49 Aligned_cols=124 Identities=10% Similarity=0.233 Sum_probs=84.0 Q ss_pred ceEEEEEEeecCCCCceEEEEEeCCCCeEEEEEEEcccccCceeEEEEEEecCCCcceeEeee----cccCCCccceEEE Q FBpp0290335 87 EFAILITFRQSSLKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLASF----GVAHVPDKWNSIA 162 (971) Q Consensus 87 eFSilaT~R~~~~~~g~LfsV~~~~~~~~qlgl~lsg~~~~~~~i~L~Y~~~~~~~~~~~~sF----~v~l~dg~WHrla 162 (971) +|+|.+.||.. ...+.||.+.+. ...+|.|.|..- + |.|.|...... ....+ ...+.||+||+|. T Consensus 233 ~~~is~~frT~-~~~GlLl~~~~~--~~~~l~l~L~~G---~--l~~~~~~g~g~---~~~~~~~~~~~~l~DG~WH~V~ 301 (394) T 1dyk_A 233 DLLVEFEFRTT-RPTGVLLGVSSQ--KMDGMGIEMIDE---K--LMFHVDNGAGR---FTAIYDAEIPGHMCNGQWHKVT 301 (394) T ss_dssp EEEEEEEEEES-CSCEEEEEEECS--SSCEEEEEEETT---E--EEEEEESSSCC---EEEEECCCSTTSTTSSSCEEEE T ss_pred ceEEEEEEEeC-CCCcEEEEeccC--CCCEEEEEEECC---E--EEEEEECCCCc---eEEEEecCCCCcCcCCCcEEEE Confidence 78888888874 446788888764 346788887643 2 67777543322 22222 4677899999999 Q ss_pred EEEeCCeeEEEEcccccceeeeccCCcccccCCCceEEEeccCCc-------cCcccceeeeeeEEec Q FBpp0290335 163 LQVLSDKVSFYYDCELRNTTLVTREPIELVFDSASTLYIGQAGSI-------IGGKFEGYLEKINVYG 223 (971) Q Consensus 163 LsV~g~~VtLyvDC~~~~t~~l~r~p~~l~~~~~~~l~IGq~g~~-------~~~~F~G~LQ~L~I~~ 223 (971) |...+..++|+||+........... ...++....||||..... ....|+|-|++|+|-- T Consensus 302 v~~~~~~~~L~VD~~~~~~~~~~~~--~~~~~~~~~l~iGG~p~~~~~~~~~~~~~F~GCi~~v~in~ 367 (394) T 1dyk_A 302 AKKIKNRLELVVDGNQVDAQSPNSA--STSADTNDPVFVGGFPGGLNQFGLTTNIRFRGCIRSLKLTK 367 (394) T ss_dssp EEEETTEEEEEETTEEEEEECCCTT--CCCBCCCBCCEESCCCTTCCCTTCSCCCCCEEEEEEEEEEC T ss_pred EEEeCCEEEEEECCcccccccCCcc--ccccccCCCEEECCCCCcccccCccccCCccccccEEEECC Confidence 9999999999999987654322111 122355677999864210 1246999999999964No 29>2r1b_A Neurexin-1-beta, neurexin I-beta; beta-sandwich, cell adhesion, splicing; 1.72A {Rattus norvegicus} SCOP: b.29.1.4 PDB: 3mw2_A* 3b3q_E* 3mw3_A* Probab=97.99 E-value=8e-05 Score=78.53 Aligned_cols=125 Identities=14% Similarity=0.146 Sum_probs=81.4 Q ss_pred ceEEEEEEeecCCCCceEEEEEeCCCCeEEEEEEEcccccCceeEEEEEEecCCCcceeEeee-cccCCCccceEEEEEE Q FBpp0290335 87 EFAILITFRQSSLKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLASF-GVAHVPDKWNSIALQV 165 (971) Q Consensus 87 eFSilaT~R~~~~~~g~LfsV~~~~~~~~qlgl~lsg~~~~~~~i~L~Y~~~~~~~~~~~~sF-~v~l~dg~WHrlaLsV 165 (971) .+.|.+.||... ..+.||.+.+......+|.|+|..- + +.|.|...+.. ..... ...+.|++||+|.|.. T Consensus 36 ~~~isl~frT~~-~~GlLl~~~~~~~~~d~l~l~L~~G---~--l~~~~~~G~~~---~~~~~~~~~l~DG~WH~V~v~r 106 (220) T 2r1b_A 36 ADRLAIGFSTVQ-KEAVLVRVDSSSGLGDYLELHIHQG---K--IGVKFNVGTDD---IAIEESNAIINDGKYHVVRFTR 106 (220) T ss_dssp EEEEEEEEECCC-SSEEEEEEEESTTCCCEEEEEEETT---E--EEEEEESSSSC---EEEECTTCCCCSSSCEEEEEEE T ss_pred CCEEEEEEEECC-CCeEEEEEcCCCCCCCEEEEEEeCC---E--EEEEEECCCCc---EEEecCCcCcCCCCCEEEEEEE Confidence 678888888664 5678887776422457888888543 2 77778654332 22333 5678899999999999 Q ss_pred eCCeeEEEEccccccee-ee-ccCCc---------------------------ccccCCCceEEEeccCCccCcccceee Q FBpp0290335 166 LSDKVSFYYDCELRNTT-LV-TREPI---------------------------ELVFDSASTLYIGQAGSIIGGKFEGYL 216 (971) Q Consensus 166 ~g~~VtLyvDC~~~~t~-~l-~r~p~---------------------------~l~~~~~~~l~IGq~g~~~~~~F~G~L 216 (971) .+..++|.||.....+. .. ..... ...++....||||-.. ....|+|=| T Consensus 107 ~~~~~~L~VD~~~~~~~~~~g~~~~~~l~~~~~~~~~~~g~~~~~~~~d~~~~~~~~n~~~~l~iGG~p--~~~~F~GCi 184 (220) T 2r1b_A 107 SGGNATLQVDSWPVIERYPAGNNDNERLAIARQRIPYRLGRVVDEWLLDKGRQLTIFNSQATIIIGGKE--QGQPFQGQL 184 (220) T ss_dssp ETTEEEEEETTSCCEEECC-----------------CHHHHHHHHHHHHHHHGGGSBCCEEEEEESSTT--TTCCCCEEE T ss_pred eCCEEEEEECCCcceeeccCCCCccceeeccccccceeecccccccccccccceeEecCcCcEEECCcc--CCCCCeEEE Confidence 99999999998765332 11 00000 0012223679998542 234699999 Q ss_pred eeeEEe Q FBpp0290335 217 EKINVY 222 (971) Q Consensus 217 Q~L~I~ 222 (971) ++|+|- T Consensus 185 ~~v~in 190 (220) T 2r1b_A 185 SGLYYN 190 (220) T ss_dssp EEEEET T ss_pred CcEEEC Confidence 999884No 30>4qvs_A S-layer domain-containing protein; human microbiome, midwest center for structural genomics, MC biology; 2.10A {Ruminiclostridium thermocellum atcc 27ORGANISM_TAXID} Probab=97.94 E-value=2.2e-05 Score=81.67 Aligned_cols=163 Identities=14% Similarity=0.190 Sum_probs=95.3 Q ss_pred EEEeccCCCCcceEecCC-ccccCCccccCCCCCCceEEEEEEeecCCCC---ceEEEEEeCCCCeEEEEEEEcccccCc Q FBpp0290335 53 IEFGEAEDGFPAFRFLQT-ADVKSPYRMLLPEKLYEFAILITFRQSSLKG---GYLFSVVNPLDTVVQLGVHLSPVVKNS 128 (971) Q Consensus 53 V~~v~G~d~~pAy~f~~~-a~l~~pt~~lfP~~l~eFSilaT~R~~~~~~---g~LfsV~~~~~~~~qlgl~lsg~~~~~ 128 (971) ++++.|.. ..|+.|... ..+..+.. ++ ....+|+|.++||+..... ..||+.-+ ...++-|..... ++ T Consensus 38 ~~~~~g~~-g~al~f~G~~~~v~~~~~-~~-~~~~~fTi~~Wvk~~~~~~~~~~~i~~~~~---~~~~~~l~~~~~--g~ 109 (227) T 4qvs_A 38 NGVVPGLN-GNSVSLDGVDDYVALPDG-IA-GTFYNFTIAFWVRLDTIGEQPIFDFFDSGS---NNKYMRLTAESD--GK 109 (227) T ss_dssp SCEEECSS-SEEECCCSSSCEEECCTT-SS-TTCSSCCCCCCCCCSSCSSEEEEEEECTTC---SSCEEEEEECTT--SC T ss_pred ceeccCCC-CcEEEecCcCCEEEcCcc-cc-cCCCCeEEEEEEEeCCCCCCcceeeEecCC---CCcEEEEEEcCC--Cc Confidence 45555533 368888754 33555432 11 1223999999999977664 34554322 223444433321 22 Q ss_pred eeEEEEEEecCCCcceeEeeecccCCCccceEEEEEEeCCeeEEEEcccccceeeecc-CCcccccCCCceEEEeccCCc Q FBpp0290335 129 YNVSLVYTQADQNIGRKLASFGVAHVPDKWNSIALQVLSDKVSFYYDCELRNTTLVTR-EPIELVFDSASTLYIGQAGSI 207 (971) Q Consensus 129 ~~i~L~Y~~~~~~~~~~~~sF~v~l~dg~WHrlaLsV~g~~VtLyvDC~~~~t~~l~r-~p~~l~~~~~~~l~IGq~g~~ 207 (971) +.|.+...+... ...+.-...+.+++||+|++...+..++||||.+++.+..... .+..+ +.....++||..... T Consensus 110 --l~~~~~~~~~~~-~~~~~~~~~~~~~~W~hva~t~d~~~~~lYvnG~~~~~~~~~~~~~~~~-~~~~~~~~iG~~~~~ 185 (227) T 4qvs_A 110 --IKFAMTQSGYYG-EKTITSGSALTEGVWKHVAVTLSGDTGTLYINGENVGENNTLSLRPLTF-LGETSKGYIGKSHQT 185 (227) T ss_dssp --EEEEEESSCGGG-CEEEECCCCCCTTCCCCEEEEEETTEEEEEETTEEEEEETTCCC-CCSS-SGGGCCCCSSCCCCC T ss_pred --EEEEEeCCCCCc-ceEEecCCcccCCcEEEEEEEEeCCeEEEEECCEEeeeccCCCCCcccc-cCCCcceeecCCcCC Confidence 555554332111 1222224566789999999999999999999999987764321 22111 122346788875321 Q ss_pred c-------CcccceeeeeeEEecCCcc Q FBpp0290335 208 I-------GGKFEGYLEKINVYGNPDA 227 (971) Q Consensus 208 ~-------~~~F~G~LQ~L~I~~dp~~ 227 (971) . ...|.|.|.+|+|+..+.. T Consensus 186 ~~~~~~~~~~~f~G~idevri~~~aLs 212 (227) T 4qvs_A 186 DSSEDPYYNSYLHGMIDDFRIFDRALS 212 (227) T ss_dssp SCTTCSSTTCCCCSCCCCCCCCSSCCC T ss_pred CccCCcccccccCcEeeEEEEEcccCC Confidence 1 1379999999999866543No 31>1h30_A GAS6, growth-arrest-specific protein; laminin G-domain protein, vitamin K-dependent protein, AXL/SKY/MER ligand, laminin G- like domain; 2.2A {Homo sapiens} SCOP: b.29.1.4 b.29.1.4 PDB: 2c5d_A* 4ra0_A* Probab=97.56 E-value=0.0014 Score=75.59 Aligned_cols=126 Identities=13% Similarity=0.142 Sum_probs=83.5 Q ss_pred ceEEEEEEeecCCCCceEEEEEeCCCCeEEEEEEEcccccCceeEEEEEEecCCCcceeEeeecccCCCccceEEEEEEe Q FBpp0290335 87 EFAILITFRQSSLKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLASFGVAHVPDKWNSIALQVL 166 (971) Q Consensus 87 eFSilaT~R~~~~~~g~LfsV~~~~~~~~qlgl~lsg~~~~~~~i~L~Y~~~~~~~~~~~~sF~v~l~dg~WHrlaLsV~ 166 (971) .|+|.+.||... ..+.||-..+. +...+|.|+|..-. +.|.|...+.. .+..-...+.|++||+|.|... T Consensus 62 ~~~isl~frT~~-~~GlLl~~~~~-~~~d~~~L~L~~G~-----l~~~~~~g~~~---~~~~~~~~lnDg~WH~V~v~~~ 131 (422) T 1h30_A 62 RLVAEFDFRTFD-PEGILLFAGGH-QDSTWIVLALRAGR-----LELQLRYNGVG---RVTSSGPVINHGMWQTISVEEL 131 (422) T ss_dssp CCEEEEEEEECC-SSEEEEEEESC-TTSEEEEEEEETTE-----EEEEEEETTEE---EEEEEEEECCSSCCEEEEEEEC T ss_pred cEEEEEEEEeCC-CCeEEEEeCCC-CCCCEEEEEEECCE-----EEEEEECCCCc---eEEeCCceecCCCCEEEEEEEc Confidence 788888888764 56788888775 34578999987652 77777654421 2222345678999999999999 Q ss_pred CCeeEEEEcccccceeeeccCCcccccC-CCceEEEeccCC-------ccCcccceeeeeeEEe Q FBpp0290335 167 SDKVSFYYDCELRNTTLVTREPIELVFD-SASTLYIGQAGS-------IIGGKFEGYLEKINVY 222 (971) Q Consensus 167 g~~VtLyvDC~~~~t~~l~r~p~~l~~~-~~~~l~IGq~g~-------~~~~~F~G~LQ~L~I~ 222 (971) +..++|+||-+.+.+...+.....+... ....||||-... .....|.|=|++|+|+ T Consensus 132 ~~~~~l~vD~~~~~~~~~~g~~~~l~~~~~~~~lyvGG~p~~~~~~~~~~~~~F~GCi~~l~~~ 195 (422) T 1h30_A 132 ARNLVIKVNRDAVMKIAVAGDLFQPERGLYHLNLTVGGIPFHEKDLVQPINPRLDGCMRSWNWL 195 (422) T ss_dssp SSEEEEEETTEEEEEEECCSCSSEEETTEEECEEEESSCSSCGGGSSSCCCCCCCEEEEEEEEC T ss_pred CCEEEEEECCcceEeeecCCcccccccCcccceEEEecccCcccccccccCCCCCEEeeeeEEc Confidence 9999999998655333322221122100 235799985421 1124699999999963No 32>2jd4_A Laminin subunit alpha-1; basement membrane protein, metal binding protein; 1.9A {Mus musculus} SCOP: b.29.1.0 Probab=97.53 E-value=0.0021 Score=72.93 Aligned_cols=124 Identities=15% Similarity=0.246 Sum_probs=82.0 Q ss_pred ceEEEEEEeecCCCCceEEEEEeCCCCeEEEEEEEcccccCceeEEEEEEecCCCcceeEeeecccCCCccceEEEEEEe Q FBpp0290335 87 EFAILITFRQSSLKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLASFGVAHVPDKWNSIALQVL 166 (971) Q Consensus 87 eFSilaT~R~~~~~~g~LfsV~~~~~~~~qlgl~lsg~~~~~~~i~L~Y~~~~~~~~~~~~sF~v~l~dg~WHrlaLsV~ 166 (971) +|+|.+.||... ..+.||-.-+. +...+|.|+|..-. +.|.|.-.++. ..+.....+.|++||+|.+... T Consensus 44 ~~~is~~frT~~-~~GlLl~~~~~-~~~d~~~l~L~~G~-----l~~~~~~g~~~---~~~~~~~~v~Dg~WH~V~v~r~ 113 (383) T 2jd4_A 44 RLQVQLSIRTFA-SSGLIYYVAHQ-NQMDYATLQLQEGR-----LHFMFDLGKGR---TKVSHPALLSDGKWHTVKTEYI 113 (383) T ss_dssp EEEEEEEEEECC-SCEEEEEEECT-TSSSEEEEEEETTE-----EEEEEECSSCE---EEEECCCCCTTSSCEEEEEEEE T ss_pred ceEEEEEEEeCC-CCeEEEEeCCC-CCCcEEEEEEECCE-----EEEEEECCCCe---EEEeCCccccCCCCEEEEEEEE Confidence 788888998755 45677776653 24568888886542 77777554322 2233355678999999999999 Q ss_pred CCeeEEEEcccccceeeeccCCcccccCCCceEEEeccCCc--------cCcccceeeeeeEEe Q FBpp0290335 167 SDKVSFYYDCELRNTTLVTREPIELVFDSASTLYIGQAGSI--------IGGKFEGYLEKINVY 222 (971) Q Consensus 167 g~~VtLyvDC~~~~t~~l~r~p~~l~~~~~~~l~IGq~g~~--------~~~~F~G~LQ~L~I~ 222 (971) +..++|+||-........+..... ++....||||-.... ....|.|-|++|+|. T Consensus 114 ~~~~~L~vD~~~~~~~~~~~~~~~--l~~~~~l~iGG~p~~~~~~~~~~~~~~F~GCi~~l~in 175 (383) T 2jd4_A 114 KRKAFMTVDGQESPSVTVVGKATT--LDVERKLYLGGLPSHYRARNIGTITHSIPACIGEIMVN 175 (383) T ss_dssp TTEEEEEETTEECCCEECCSSCCC--CCCCSEEEESSCCTTCCCCSSCSCCSBCCEEEEEEEET T ss_pred CCEEEEEEeCCccceeecCCCCce--ecCCCCEEEeCcCccccccccccccCCeeeEeeeEEEC Confidence 999999999765443332221112 344567999843110 123599999999984No 33>4dqa_A Uncharacterized protein; two domains structure, DUF 1735, laminin_G_3 concanavalin A- lectin/glucanases superfamily domain; HET: MSE; 1.50A {Bacteroides ovatus} Probab=97.40 E-value=0.0023 Score=72.32 Aligned_cols=150 Identities=12% Similarity=0.121 Sum_probs=89.2 Q ss_pred CcceEecCCccccCCccccCCCCCCceEEEEEEeecCCC-CceEEEEEeCCCCeEEEEEEEcccccC-ceeEEEEEEecC Q FBpp0290335 62 FPAFRFLQTADVKSPYRMLLPEKLYEFAILITFRQSSLK-GGYLFSVVNPLDTVVQLGVHLSPVVKN-SYNVSLVYTQAD 139 (971) Q Consensus 62 ~pAy~f~~~a~l~~pt~~lfP~~l~eFSilaT~R~~~~~-~g~LfsV~~~~~~~~qlgl~lsg~~~~-~~~i~L~Y~~~~ 139 (971) ..|++|.. ..+..+.... ....+|+|-+++|+.... ...||+ . ++ .|.+++.....+ ...-.|.+... T Consensus 140 ~~al~f~G-~yi~v~~~~~--~~~~~fTi~~Wvk~~~~~~~~~i~g---~-~g--~~~l~~~~~~~gi~~~~~l~~~g~- 209 (355) T 4dqa_A 140 TKAGNFSN-HYISVKFPVG--TFFSSFTYEALINVDYFLDNNTIMG---T-EG--VMILRIGDAGGGITPKDYLEVAGG- 209 (355) T ss_dssp CEEEEEES-CCEEECCCTT--CCBSSEEEEEEEEESCCCSSEEEEE---E-TT--TEEEEEEEGGGTSEEEEEEEEEES- T ss_pred ccccccCC-ceEEecCCCC--CCccCEEEEEEEEccccCCcceEEc---C-CC--cEEEEecCCCcCcCcCCEEEEcCC- Confidence 45667765 3444332211 122499999999997654 344554 2 23 234444322100 01123444322 Q ss_pred CCcceeEeeecccCCCccceEEEEEEe--CCeeEEEEcccccceeeeccCCcccccCCCceEEEeccCCc--cCccccee Q FBpp0290335 140 QNIGRKLASFGVAHVPDKWNSIALQVL--SDKVSFYYDCELRNTTLVTREPIELVFDSASTLYIGQAGSI--IGGKFEGY 215 (971) Q Consensus 140 ~~~~~~~~sF~v~l~dg~WHrlaLsV~--g~~VtLyvDC~~~~t~~l~r~p~~l~~~~~~~l~IGq~g~~--~~~~F~G~ 215 (971) . .+. -...+.+++||+|++... +..++||||.+++.+....... +.+.....++||+.... ....|.|. T Consensus 210 ~----~~~-s~~~~~~~~W~Hva~t~d~~~~~~~lYvnG~~~~~~~~~~~~--~~~~~~~~l~IG~~~~~~~~~~~f~G~ 282 (355) T 4dqa_A 210 Q----NYR-VTKPLLTNRWYHVALTYDQPTGKTGIYVNGEKWAGSDWGIDG--FDPNSDMGFYIGRIYGFKWGERPFHGK 282 (355) T ss_dssp S----CEE-CSSCCCSSCEEEEEEEEETTTTEEEEEETTEEEEEEECCCCC--BCTTSTTCEEESCCTTCTTCCCCCEEE T ss_pred C----ccc-cCCccCCCCEEEEEEEEECCCCEEEEEECCEEEeEEEcCCCc--cccCCCceEEEcCCCCCCCCCccceEE Confidence 1 111 134567999999999999 8999999999998776543322 22233567999986321 24589999 Q ss_pred eeeeEEecCCccc Q FBpp0290335 216 LEKINVYGNPDAI 228 (971) Q Consensus 216 LQ~L~I~~dp~~a 228 (971) |.++||+..+... T Consensus 283 idevri~~~aLs~ 295 (355) T 4dqa_A 283 MSEVRVWSVARTE 295 (355) T ss_dssp EEEEEEESSCCCH T ss_pred EEEEEEECCCCCH Confidence 9999999776544No 34>1a8d_A Tetanus neurotoxin; clostridial, ganglioside binding region; 1.57A {Clostridium tetani} SCOP: b.29.1.6 b.42.4.2 PDB: 1af9_A 1fv3_A* 1fv2_A* 3hmy_A* 3hn1_A* 1d0h_A* 1dfq_A* 1dll_A* 1yxw_A* 1yyn_A* 1diw_A* Probab=97.36 E-value=0.0072 Score=70.56 Aligned_cols=165 Identities=9% Similarity=0.147 Sum_probs=94.4 Q ss_pred CcEEEeccCCCCcceEecCCcc----ccCCccccCCCCCC-ceEEEEEEeecCCC-C------ceEEEEEeCCCC----- Q FBpp0290335 51 AGIEFGEAEDGFPAFRFLQTAD----VKSPYRMLLPEKLY-EFAILITFRQSSLK-G------GYLFSVVNPLDT----- 113 (971) Q Consensus 51 ~GV~~v~G~d~~pAy~f~~~a~----l~~pt~~lfP~~l~-eFSilaT~R~~~~~-~------g~LfsV~~~~~~----- 113 (971) ..++++.|.. ..|+.|..... +..+.. ++...+. +|||.+++|+.... . .-+++|.+..+. T Consensus 47 G~vs~v~G~~-GkAl~fdG~~~S~~~V~lp~~-ll~~~~~~sFTISfWVK~~~~~t~~~~~y~~g~~~Ii~~~~~~w~~~ 124 (452) T 1a8d_A 47 PDAQLVPGIN-GKAIHLVNNESSEVIVHKAMD-IEYNDMFNNFTVSFWLRVPKVSASHLEQYGTNEYSIISSMKKHSLSI 124 (452) T ss_dssp TTCEEEECSS-SEEEEEESSTTCCEEEECCGG-GTTTTTTSCEEEEEEEECCCCCHHHHHHHTTCEEEEEECCEECGGGC T ss_pred CCceecCCcc-cceEEEcCCCCceEEEecCch-hcccCCCCCEEEEEEEeccccCcccccccccCceEEEeccCcccccC Confidence 4577887744 57999986542 444433 3333444 99999999997653 1 224555543211 Q ss_pred eEEEEEEEcccccCceeEEEEEEecCCCcceeEeee-----ccc-CCCccceEEEEEEe-CCeeEEEEcccccceeeecc Q FBpp0290335 114 VVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLASF-----GVA-HVPDKWNSIALQVL-SDKVSFYYDCELRNTTLVTR 186 (971) Q Consensus 114 ~~qlgl~lsg~~~~~~~i~L~Y~~~~~~~~~~~~sF-----~v~-l~dg~WHrlaLsV~-g~~VtLyvDC~~~~t~~l~r 186 (971) ...+.|.+... + +.|.+....+. .+...| .++ +.+++||+|++.+. ...++||||-+++.+..+.. T Consensus 125 ~~G~~i~l~~g---~--l~f~~~~~~G~--~~~i~~~~~~~~i~~v~~g~W~HVAvT~D~~~~~~lYVNG~lv~~~~~~~ 197 (452) T 1a8d_A 125 GSGWSVSLKGN---N--LIWTLKDSAGE--VRQITFRDLPDKFNAYLANKWVFITITNDRLSSANLYINGVLMGSAEITG 197 (452) T ss_dssp EEEEEEEEETT---E--EEEEEECTTSC--EEEEEEECCSBTTSCSSSSSCEEEEEEECTTSEEEEEETTEEEEEEECTT T ss_pred CCCcEEEEcCC---e--EEEEEEeCCCC--cceeEeeccccccCcCCCCceEEEEEEEeCCCCEEEeECCEEeeeecccc Confidence 34455554432 2 44444332221 111111 222 23799999999998 45679999999887764432 Q ss_pred CCcccccCCCceEEEeccCCccCcccceeeeeeEEecCCccc Q FBpp0290335 187 EPIELVFDSASTLYIGQAGSIIGGKFEGYLEKINVYGNPDAI 228 (971) Q Consensus 187 ~p~~l~~~~~~~l~IGq~g~~~~~~F~G~LQ~L~I~~dp~~a 228 (971) .. . +.....+.|+..... ...|.|.|.+|||+-.+..+ T Consensus 198 ~~-~--i~~~~~~~lgiG~~~-d~~f~G~IDEvRIynrALS~ 235 (452) T 1a8d_A 198 LG-A--IREDNNITLKLDRCN-NNNQYVSIDKFRIFCKALNP 235 (452) T ss_dssp CC-C--CCCCSEEEEEEESCC-CTTCEEEEEEEEEESSCCCH T ss_pred cc-c--cccCCeEEEEEccCC-CCCCcEEEEEEEEECCcCCH Confidence 11 1 122334445432111 24699999999999776443No 35>1dyk_A Laminin alpha 2 chain; metal binding protein; 2.0A {Mus musculus} SCOP: b.29.1.4 b.29.1.4 PDB: 1okq_A 1qu0_A Probab=97.35 E-value=0.003 Score=72.04 Aligned_cols=124 Identities=15% Similarity=0.224 Sum_probs=81.8 Q ss_pred ceEEEEEEeecCCCCceEEEEEeCCCCeEEEEEEEcccccCceeEEEEEEecCCCcceeEeeecccCCCccceEEEEEEe Q FBpp0290335 87 EFAILITFRQSSLKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLASFGVAHVPDKWNSIALQVL 166 (971) Q Consensus 87 eFSilaT~R~~~~~~g~LfsV~~~~~~~~qlgl~lsg~~~~~~~i~L~Y~~~~~~~~~~~~sF~v~l~dg~WHrlaLsV~ 166 (971) +|+|.+.||... ..+.||-..+. +...+|.|+|..-. +.|.|...+.. ..+.....+.|++||+|.+... T Consensus 58 ~~~is~~frT~~-~~GlLl~~~~~-~~~d~~~l~l~~G~-----l~~~~~~g~g~---~~~~~~~~~nDg~WH~V~v~~~ 127 (394) T 1dyk_A 58 RLTIELEVRTEA-ESGLLFYMARI-NHADFATVQLRNGF-----PYFSYDLGSGD---TSTMIPTKINDGQWHKIKIVRV 127 (394) T ss_dssp EEEEEEEEEECC-SCEEEEEEECT-TSSSEEEEEEETTE-----EEEEEESSSCE---EEEECCSCCCSSSCEEEEEEEE T ss_pred ceEEEEEEEECC-CCeEEEEeCCC-CCCCeEEEEEECCE-----EEEEEECCCCc---EEEEecceecCCCeEEEEEEEe Confidence 788888888754 45677776653 34578888886542 77777543322 2233355678999999999999 Q ss_pred CCeeEEEEcccccceeeeccCCcccccCCCceEEEeccCCc--------cCcccceeeeeeEEec Q FBpp0290335 167 SDKVSFYYDCELRNTTLVTREPIELVFDSASTLYIGQAGSI--------IGGKFEGYLEKINVYG 223 (971) Q Consensus 167 g~~VtLyvDC~~~~t~~l~r~p~~l~~~~~~~l~IGq~g~~--------~~~~F~G~LQ~L~I~~ 223 (971) +..++|+||-....... +..... ++....||||-.... ....|.|-|++|+|.- T Consensus 128 ~~~~~L~vD~~~~~~~~-~~~~~~--l~~~~~l~lGG~p~~~~~~~~~~~~~~F~GCi~~l~in~ 189 (394) T 1dyk_A 128 KQEGILYVDDASSQTIS-PKKADI--LDVVGILYVGGLPINYTTRRIGPVTYSLDGCVRNLHMEQ 189 (394) T ss_dssp TTEEEEEETTEEEEEEC-STTCCC--CCCCSEEEESSCCTTCCCCSSCSCCSBCSEEEEEEEESS T ss_pred CCEEEEEECCcccccCc-CCCCcc--ccCCCceEEcccCCcccccccccCCCCceEEeeEEEECC Confidence 99999999976543322 111112 344667999853110 0135999999999853No 36>2wjs_A Laminin subunit alpha-2; integrin, secreted, coiled coil, glycoprotein, laminin EGF-like domain, extracellular matrix, laminin G-like domain; HET: NAG; 2.80A {Mus musculus} Probab=97.32 E-value=0.0021 Score=77.70 Aligned_cols=123 Identities=13% Similarity=0.160 Sum_probs=77.9 Q ss_pred ceEEEEEEeecCCCCceEEEEEeCCCCeEEEEEEEcccccCceeEEEEEEecCCCcceeEe--eecccCCCccceEEEEE Q FBpp0290335 87 EFAILITFRQSSLKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLA--SFGVAHVPDKWNSIALQ 164 (971) Q Consensus 87 eFSilaT~R~~~~~~g~LfsV~~~~~~~~qlgl~lsg~~~~~~~i~L~Y~~~~~~~~~~~~--sF~v~l~dg~WHrlaLs 164 (971) ++.|.+.||.. ...+.||.+.+. ...+|.|.|..- + |.|.|....... ..++ .....+.||+||+|.|. T Consensus 408 ~~~i~~~FRT~-~~~GlLl~~~~~--~~~~l~l~L~~G---~--l~~~~~~g~~~~-~~~~~~~~~~~l~DG~WH~V~l~ 478 (608) T 2wjs_A 408 GTEINLSFSTR-NESGIILLGSGG--GQAYYAIFLNKG---R--LEVHLSSGTRTM-RKIVIKPEPNRFHDGREHSVHVE 478 (608) T ss_dssp TEEEEEEEEES-CSSEEEEEEC-----CCEEEEEEETT---E--EEEEEEC----C-EEEEECCCSSCSSSSSCEEEEEE T ss_pred CcEEEEEEEeC-CCceEEEEEcCC--CCCEEEEEEECC---E--EEEEEECCCCce-eeEEEecCCcccCCCCEEEEEEE Confidence 67777788754 556788866553 345788887643 2 677775433221 1122 23567889999999999 Q ss_pred EeCCeeEEEEcccccceeeeccCCcccccCCCceEEEeccCCc-------cCcccceeeeeeEEe Q FBpp0290335 165 VLSDKVSFYYDCELRNTTLVTREPIELVFDSASTLYIGQAGSI-------IGGKFEGYLEKINVY 222 (971) Q Consensus 165 V~g~~VtLyvDC~~~~t~~l~r~p~~l~~~~~~~l~IGq~g~~-------~~~~F~G~LQ~L~I~ 222 (971) ..+..++|+||.+......+... ..+ +. ..||||..... ....|+|=|++|+|- T Consensus 479 ~~~~~~~L~VD~~~~~~~~~~~~-~~l--~~-~~lylGG~p~~~~~~~~~~~~~F~GCi~~v~in 539 (608) T 2wjs_A 479 RTRGIFTVQIDEDRRHMQNLTEE-QPI--EV-KKLFVGGAPPEFQPSPLRNIPAFQGCVWNLVIN 539 (608) T ss_dssp ECSSEEEEEESSSCCEEEECCCC-SCB--CC-SCEEESCCCC--------CCCCCCEEEEEEEET T ss_pred EeCCEEEEEECCCcceeeccCCC-ccc--cc-ccEEEeCCCccccccccccCCCCEEEcCeeEEC Confidence 99999999999987654433321 122 22 36999864210 124699999999984No 37>2jkb_A Sialidase B; intramolecular trans-sialidase, lyase, glycosidase, neuraminidase; HET: SKD; 1.54A {Streptococcus pneumoniae} PDB: 2vw2_A* 2vw1_A* 2vw0_A* 4foq_A 4fov_A* 4fow_A 4foy_A* 4fp2_A* 4fp3_A* 4fpc_A* 4fpe_A* 4fpf_A* 4fpg_A* 4fph_A* 4fpj_A* 4fpk_A* 4fpl_A* 4fpo_B* 4fpy_A* 4fq4_A* Probab=97.29 E-value=0.0029 Score=77.76 Aligned_cols=163 Identities=10% Similarity=0.074 Sum_probs=98.9 Q ss_pred CcceEecCCccccCCccccCCCCC--CceEEEEEEeecC-CCCceEEEEEeCCC--CeEEEEEEEcccccCceeEEEEEE Q FBpp0290335 62 FPAFRFLQTADVKSPYRMLLPEKL--YEFAILITFRQSS-LKGGYLFSVVNPLD--TVVQLGVHLSPVVKNSYNVSLVYT 136 (971) Q Consensus 62 ~pAy~f~~~a~l~~pt~~lfP~~l--~eFSilaT~R~~~-~~~g~LfsV~~~~~--~~~qlgl~lsg~~~~~~~i~L~Y~ 136 (971) ..|+.|.... +..+... -..| .+|+|.++||+.. .+...||++-+... ...+|.|.+... ++ +.|... T Consensus 34 g~a~~fdG~~-v~l~~~~--~~~l~~~~fTv~~Wvk~~~~~~~~~lfs~~~~~~~~~~~~~~l~~~~~--g~--~~~~~~ 106 (686) T 2jkb_A 34 GGSYQLNNKS-IDISSLL--LDKLSGESQTVVMKFKADKPNSLQALFGLSNSKAGFKNNYFSIFMRDS--GE--IGVEIR 106 (686) T ss_dssp EEEEEEESSC-EECHHHH--GGGCCSSCEEEEEEEECSSCCSEEEEEEEECCSTTCTTCEEEEEEETT--SC--EEEEEE T ss_pred cceEEecCce-EECchhc--cccCCCCCeEEEEEEEeCCCCCCCEEEEecCCCCCCccccEEEEEeCC--Ce--EEEEEE Confidence 4688886543 4444333 2345 5999999999975 44557999886321 225677777642 22 556555 Q ss_pred ecCCCcceeEeeeccc-----CCCccceEEEEEEeC--CeeEEEEcccccceeeeccCCcccccCCCceEEEeccCCc-- Q FBpp0290335 137 QADQNIGRKLASFGVA-----HVPDKWNSIALQVLS--DKVSFYYDCELRNTTLVTREPIELVFDSASTLYIGQAGSI-- 207 (971) Q Consensus 137 ~~~~~~~~~~~sF~v~-----l~dg~WHrlaLsV~g--~~VtLyvDC~~~~t~~l~r~p~~l~~~~~~~l~IGq~g~~-- 207 (971) ..+.... ..+..... ..+++||+|++.... ..++||||-+++.+.........-.+.....|+||+.... T Consensus 107 ~~~~~~~-~~~~~~~~~~~~~~~~g~W~Hva~t~d~~~g~~~lYvnG~~~~~~~~~~~~~~~~~~~~~~~~IG~~~~~g~ 185 (686) T 2jkb_A 107 DAQKGIN-YLFSRPASLWGKHKGQAVENTLVFVSDSKDKTYTMYVNGIEVFSETVDTFLPISNINGIDKATLGAVNREGK 185 (686) T ss_dssp ETTTTEE-EEEEESSCCCCEETTEECCEEEEEEEETTTTEEEEEETTEEEEEEECSSCCCGGGSTTCCEEEESSEEETTE T ss_pred eCCCcee-EEeeccccccccccCCCCeEEEEEEEECCCCeEEEEECCEEEEeeccccceecccCCCCceEEECCeecCCC Confidence 4432211 11111111 136899999999976 4899999999987765433111011233357999984211 Q ss_pred cCcccceeeeeeEEecCCccccccC Q FBpp0290335 208 IGGKFEGYLEKINVYGNPDAINVTC 232 (971) Q Consensus 208 ~~~~F~G~LQ~L~I~~dp~~a~~~C 232 (971) ....|.|.|.+++|+..+....+.. T Consensus 186 ~~~~f~G~Idev~i~~~aLs~~eI~ 210 (686) T 2jkb_A 186 EHYLAKGSIDEISLFNKAISDQEVS 210 (686) T ss_dssp EESCCEEEEEEEEEESSCCCHHHHH T ss_pred ccccccceEEEEEEecccCCHHHHH Confidence 1124999999999997665554443No 38>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus} Probab=97.13 E-value=0.006 Score=70.03 Aligned_cols=121 Identities=16% Similarity=0.264 Sum_probs=77.8 Q ss_pred ceEEEEEEeecCCCCceEEEEEeCCCCeEEEEEEEcccccCceeEEEEEEecCCCcceeEee--ecccCCCccceEEEEE Q FBpp0290335 87 EFAILITFRQSSLKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLAS--FGVAHVPDKWNSIALQ 164 (971) Q Consensus 87 eFSilaT~R~~~~~~g~LfsV~~~~~~~~qlgl~lsg~~~~~~~i~L~Y~~~~~~~~~~~~s--F~v~l~dg~WHrlaLs 164 (971) +|+|.+.||... ..+.||-... +...+|.|+|..-. +.|.|...++. ..+. -...+.|++||+|.|. T Consensus 27 ~~~is~~frT~~-~~GlLl~~~~--~~~df~~l~L~~G~-----l~~~~~~G~g~---~~~~~~s~~~vnDg~WH~V~v~ 95 (410) T 3asi_A 27 SMHLFFQFKTTS-LDGLILYNSG--DGNDFIVVELVKGY-----LHYVFDLGNGA---NLIKGSSNKPLNDNQWHNVMIS 95 (410) T ss_dssp CEEEEEEEECSC-SCEEEEEEEB--STTCEEEEEEETTE-----EEEEEESSSCE---EEEECCCSSCSCSSSCEEEEEE T ss_pred eEEEEEEEEECC-CCEEEEEeCC--CCCCeEEEEEECCE-----EEEEEECCCCc---EEEEecCCCccCCCCCEEEEEE Confidence 788888888765 4567764443 34578888886542 67777543321 2222 2457889999999999 Q ss_pred EeCCe-eEEEEcccccceeeeccCCcccccCCCceEEEeccCCc----------cCcccceeeeeeEEe Q FBpp0290335 165 VLSDK-VSFYYDCELRNTTLVTREPIELVFDSASTLYIGQAGSI----------IGGKFEGYLEKINVY 222 (971) Q Consensus 165 V~g~~-VtLyvDC~~~~t~~l~r~p~~l~~~~~~~l~IGq~g~~----------~~~~F~G~LQ~L~I~ 222 (971) ...++ ++|+||-....... .. . ..++....||||-.... ....|+|=|++|+|- T Consensus 96 ~~~~~~~~L~vD~~~~~~~~-~~-~--~~l~~~~~lyvGG~p~~~~~~~~~~~~~~~~F~GCi~~v~in 160 (410) T 3asi_A 96 RDTSNLHTVKIDTKITTQIT-AG-A--RNLDLKSDLYIGGVAKETYKSLPKLVHAKEGFQGCLASVDLN 160 (410) T ss_dssp ECTTCEEEEEETTEEEEEEC-TT-C--CCCCBCSCEEESCCCGGGGGGSCTTCCCSSBCCEEEEEEESS T ss_pred EcCCccEEEEECCccceecC-CC-c--eeeccCCCeEEcccccchhcccccccccccCcceEeeeeEEC Confidence 99876 69999987543221 11 1 12334567999854210 123599999999874No 39>1h30_A GAS6, growth-arrest-specific protein; laminin G-domain protein, vitamin K-dependent protein, AXL/SKY/MER ligand, laminin G- like domain; 2.2A {Homo sapiens} SCOP: b.29.1.4 b.29.1.4 PDB: 2c5d_A* 4ra0_A* Probab=97.04 E-value=0.0052 Score=70.77 Aligned_cols=127 Identities=15% Similarity=0.221 Sum_probs=78.7 Q ss_pred ceEEEEEEeecCCCCceEEEEEeCCCCeEEEEEEEcccc-cCcee---EEEEEEecCCCcceeEeeecccCCCccceEEE Q FBpp0290335 87 EFAILITFRQSSLKGGYLFSVVNPLDTVVQLGVHLSPVV-KNSYN---VSLVYTQADQNIGRKLASFGVAHVPDKWNSIA 162 (971) Q Consensus 87 eFSilaT~R~~~~~~g~LfsV~~~~~~~~qlgl~lsg~~-~~~~~---i~L~Y~~~~~~~~~~~~sF~v~l~dg~WHrla 162 (971) +|+|.+.||.. ...+.||.+.+......+|.|.|..-. ..+.+ |.|.+ ... .+......+.||+||+|. T Consensus 250 ~~~is~~frT~-~~~GlLl~~~~~~~~~d~l~l~L~~g~~~g~l~~~~v~~~~--~~~----~~~~~~~~l~DG~WH~V~ 322 (422) T 1h30_A 250 EVEVVAHIRPA-ADTGVLFALWAPDLRAVPLSVALVDYHSTKKLKKQLVVLAV--EHT----ALALMEIKVCDGQEHVVT 322 (422) T ss_dssp CEEEEEEEEES-SSCEEEEEEEEGGGTEEEEEEEEESCC-----CCCEEEEEE--TTE----EEEEEECCTTSSCCEEEE T ss_pred eeEEEEEEEeC-CCCEEEEEEeccCCCcCceEEEEeeccccccccccEEEEEE--CCe----EEEEeeeeecCCCEEEEE Confidence 78888888876 456789888764334567888775310 01111 45555 221 122235778899999999 Q ss_pred EEEeCCeeEEEEcccccceeeeccC-Ccc-----cccCCCceEEEeccCCc------cCcccceeeeeeEE Q FBpp0290335 163 LQVLSDKVSFYYDCELRNTTLVTRE-PIE-----LVFDSASTLYIGQAGSI------IGGKFEGYLEKINV 221 (971) Q Consensus 163 LsV~g~~VtLyvDC~~~~t~~l~r~-p~~-----l~~~~~~~l~IGq~g~~------~~~~F~G~LQ~L~I 221 (971) |......++|+||.....+...... ... ..+.....||||..... ....|+|=|+ |+| T Consensus 323 l~~~~~~~~L~VD~~~~~~~~~~~~~~~~~~~l~~~l~~~~~lylGG~p~~~~~~~~~~~~F~GCi~-v~i 392 (422) T 1h30_A 323 VSLRDGEATLEVDGTRGQSEVSAAQLQERLAVLERHLRSPVLTFAGGLPDVPVTSAPVTAFYRGCMT-LEV 392 (422) T ss_dssp EEEETTEEEEEETTEECEESSCHHHHHHHHHHHHHHHTSCCEEEESCCCSCCTTSSSCCSBCCEEEE-EEE T ss_pred EEEECCEEEEEeCCccceeeccccchhhhhhhhhHhhccCccEEEcCcCCCcccccccCCCceEEEE-EEE Confidence 9999999999999987654332110 000 02345678999854211 1235899995 766No 40>2vu9_A Botulinum neurotoxin A heavy chain; hydrolase, metalloprotease, ganglioside, metal-B toxin, protease, membrane, receptor, secreted; HET: BGC GAL SIA NGA; 1.6A {Clostridium botulinum} SCOP: b.29.1.6 b.42.4.2 PDB: 2vua_A 4jra_A 3fuo_A 4iqp_A Probab=97.04 E-value=0.017 Score=65.79 Aligned_cols=166 Identities=10% Similarity=0.167 Sum_probs=100.2 Q ss_pred CCcEEEeccCCCCcceEecCCc----cccCCccccCCCCCC-ceEEEEEEeecCCCCce----EEEEEeCCCCeEEEEEE Q FBpp0290335 50 FAGIEFGEAEDGFPAFRFLQTA----DVKSPYRMLLPEKLY-EFAILITFRQSSLKGGY----LFSVVNPLDTVVQLGVH 120 (971) Q Consensus 50 ~~GV~~v~G~d~~pAy~f~~~a----~l~~pt~~lfP~~l~-eFSilaT~R~~~~~~g~----LfsV~~~~~~~~qlgl~ 120 (971) ...|+++.| . ..||.|.... .+.+ +..++-+.++ +|||.+++|..+.+... .++|.+......-..|- T Consensus 48 ~G~v~~~~G-~-g~A~~L~~s~~s~~~v~~-~ndii~n~~~nnFSIsFWvr~~k~~~~~~~~~e~tIIn~k~~NsGW~Is 124 (444) T 2vu9_A 48 GSKVNFDPI-D-KNQIQLFNLESSKIEVIL-KNAIVYNSMYENFSTSFWIRIPKYFNSISLNNEYTIINCMENNSGWKVS 124 (444) T ss_dssp CTTEEECSS-C-TTCEEEESSTTCCEEEEC-CGGGSCEESSCCEEEEEEEECCCCCSGGGTTCCEEEEEEEETTEEEEEE T ss_pred CCceEEEec-C-CcEEEeccCCCceEEEec-CchhhhccccCceEEEEEEECCCCCcccccCCceEeEeeccCCCCeEEE Confidence 356888888 3 5588886544 2333 4444555666 99999999997766633 55555433223334444 Q ss_pred EcccccCceeEEEEEEecCCCcceeEeeec------ccCCCccceEEEEEEe-CCeeEEEEcccccceeeeccCCccccc Q FBpp0290335 121 LSPVVKNSYNVSLVYTQADQNIGRKLASFG------VAHVPDKWNSIALQVL-SDKVSFYYDCELRNTTLVTREPIELVF 193 (971) Q Consensus 121 lsg~~~~~~~i~L~Y~~~~~~~~~~~~sF~------v~l~dg~WHrlaLsV~-g~~VtLyvDC~~~~t~~l~r~p~~l~~ 193 (971) +... .++++-.+.....+...|. ++...++||+|++++. -...++|+|-+++.+..+.-.. .+.+ T Consensus 125 l~~n-------~liwtl~dsngn~k~i~f~y~~~~~I~dyinkW~hVtIt~Drlg~a~IYING~lv~~k~I~~lg-~I~~ 196 (444) T 2vu9_A 125 LNYG-------EIIWTLQDTQEIKQRVVFKYSQMINISDYINRWIFVTITNNRLNNSKIYINGRLIDQKPISNLG-NIHA 196 (444) T ss_dssp EETT-------EEEEEEECTTSCEEEEEEECCSBSSSCSSTTSCEEEEEEECTTSEEEEEETTEEEEEEECTTCC-CEEC T ss_pred ECCC-------eEEEEEEecCCceeeEEEecccccccccccCceEEEEEEECCCCCEEEEECCEEeeecchhhcc-ceee Confidence 4432 1444443422223444443 2212389999999999 5677999999999888665521 2222 Q ss_pred CCCceEEEeccCCccCcccceeeeeeEEecCCcccc Q FBpp0290335 194 DSASTLYIGQAGSIIGGKFEGYLEKINVYGNPDAIN 229 (971) Q Consensus 194 ~~~~~l~IGq~g~~~~~~F~G~LQ~L~I~~dp~~a~ 229 (971) .....|-|+.. ....+++.|.+|+|+..+-..+ T Consensus 197 sn~i~l~v~~~---~d~~~~~~ID~f~Ifnk~Lt~~ 229 (444) T 2vu9_A 197 SNNIMFKLDGC---RDTHRYIWIKYFNLFDKELNEK 229 (444) T ss_dssp CSEEEEEEESC---CCTTCEEEEEEEEEESSCCCHH T ss_pred CCeEEEEeccc---CCCccceeeeeeEEecccCCHH Confidence 22223444333 2246889999999998775443No 41>3vuo_A NTNHA; protection of botulinum neurotoxin, botulinum neurotoxin, to; 3.90A {Clostridium botulinum} Probab=96.99 E-value=0.015 Score=73.03 Aligned_cols=154 Identities=11% Similarity=0.158 Sum_probs=89.0 Q ss_pred CcEEEeccCCCCcceEecCCcc-ccCCccccCCCCCC-ceEEEEEEeec-CCC-CceEEEEEeCCCCeEEEEEEEccccc Q FBpp0290335 51 AGIEFGEAEDGFPAFRFLQTAD-VKSPYRMLLPEKLY-EFAILITFRQS-SLK-GGYLFSVVNPLDTVVQLGVHLSPVVK 126 (971) Q Consensus 51 ~GV~~v~G~d~~pAy~f~~~a~-l~~pt~~lfP~~l~-eFSilaT~R~~-~~~-~g~LfsV~~~~~~~~qlgl~lsg~~~ 126 (971) .+++++.|.. ..|+.|..... +..+... +...+. +|||.+++|+. ... ...+|+-.+. ...+.|.+... T Consensus 864 G~~sfv~Gv~-GkAL~FDGSd~yV~LPn~l-i~nslt~sFTVSFWVKplg~~T~~t~IIsskdn---nsGw~LsL~~n-- 936 (1196) T 3vuo_A 864 ESVELVYGVN-GESLYLKSPNETVEFSNNF-FTNGLTNNFTICFWLRFTGKDDDKTRLIGNKVN---NCGWEIYFEDN-- 936 (1196) T ss_dssp TTCEEEECSS-SEEEEECSSSCCEEEECGG-GGCCSSCCEEEEEEEEECCCCSSCEEEEEEECS---SCEEEEEEETT-- T ss_pred CCceecCCCc-CceeEEcCCCceEEeCCcc-cccCCCCcEEEEEEEccCCCCCccceEEEecCC---CCCcEEEEcCC-- Confidence 3566776643 55888886443 4433322 222233 89999999994 211 1236633331 12234444332 Q ss_pred CceeEEEEEEecCCCcceeEeeecccCCCccceEEEEEEe--CCeeEEEEcccccceeeeccCCcccccCCCceEE-Eec Q FBpp0290335 127 NSYNVSLVYTQADQNIGRKLASFGVAHVPDKWNSIALQVL--SDKVSFYYDCELRNTTLVTREPIELVFDSASTLY-IGQ 203 (971) Q Consensus 127 ~~~~i~L~Y~~~~~~~~~~~~sF~v~l~dg~WHrlaLsV~--g~~VtLyvDC~~~~t~~l~r~p~~l~~~~~~~l~-IGq 203 (971) + +.+...+..+ ..+...+. .+..++||+|++.+. +..++||||-+++.+..+.... .. .....+. +|. T Consensus 937 -t--L~Fsi~Ds~G--neqsI~~d-dI~~GkW~HVAVTyDr~G~aLKLYVNGeLVaS~sisgL~-dI--~ssg~IsFIG~ 1007 (1196) T 3vuo_A 937 -G--LVFEIIDSNG--NQESVYLS-NVINNNWYYISISVDRLKDQLLIFINDKNVANVSIEQIL-NI--YSTNVISLVNK 1007 (1196) T ss_dssp -E--EEEEEECTTC--CEEEEEEC-SCTTSCCEEEEEEEETTTTEEEEEETTEEEEEEECTTCC-CC--CCCSEEEECCC T ss_pred -c--EEEEEEeCCC--cceeeecC-CCCCCCEEEEEEEEECCCCEEEEeECCEEccccccccCc-cc--ccCCceeEecC Confidence 2 4444433332 22333443 456899999999998 5677999999998776544321 11 1223444 553 Q ss_pred cCCccCcccceeeeeeEEecCCcc Q FBpp0290335 204 AGSIIGGKFEGYLEKINVYGNPDA 227 (971) Q Consensus 204 ~g~~~~~~F~G~LQ~L~I~~dp~~ 227 (971) . |.|.|.+|||+..+.. T Consensus 1008 n-------FnG~IDEVRIYNRALS 1024 (1196) T 3vuo_A 1008 N-------NSIYVEELSVLDKPVA 1024 (1196) T ss_dssp S-------SCEEEEEEEEESSCCC T ss_pred C-------CcEEeeEEEEECCCCC Confidence 2 8999999999976643No 42>3v0a_B NTNH; botulinum neurotoxin, toxin, neurotoxin associated protein, progenitor toxin complex, VHH bound interlocked complex; HET: MES; 2.70A {Clostridium botulinum} PDB: 3v0b_B Probab=96.91 E-value=0.017 Score=72.42 Aligned_cols=154 Identities=12% Similarity=0.163 Sum_probs=88.6 Q ss_pred CcEEEeccCCCCcceEecCCcc-ccCCccccCCCCCC-ceEEEEEEeec-CCCCc-eEEEEEeCCCCeEEEEEEEccccc Q FBpp0290335 51 AGIEFGEAEDGFPAFRFLQTAD-VKSPYRMLLPEKLY-EFAILITFRQS-SLKGG-YLFSVVNPLDTVVQLGVHLSPVVK 126 (971) Q Consensus 51 ~GV~~v~G~d~~pAy~f~~~a~-l~~pt~~lfP~~l~-eFSilaT~R~~-~~~~g-~LfsV~~~~~~~~qlgl~lsg~~~ 126 (971) .+++++.|.. ..|+.|..... +..+...++- .+. +|||.+++|+. ....+ .+|+-.+. ..- +.+.+... T Consensus 867 G~~sfvdGv~-GkAL~FDGSs~yV~LPn~li~n-S~tdsFTVSFWVK~lge~Ta~ttIISs~dn--nsG-WeIsL~nn-- 939 (1196) T 3v0a_B 867 KDIGLVYGIN-SDALYLNGSNQSISFSNDFFEN-GLTNSFSIYFWLRNLGKDTIKSKLIGSKED--NCG-WEIYFQDT-- 939 (1196) T ss_dssp TTCEEEECSS-SEEEEECSSSCCEEEECGGGGC-CSSCCEEEEEEEEECCCCCSCEEEEEEEET--TEE-EEEEEETT-- T ss_pred CCceecCCCc-CceEEEcCCccEEECCCccccc-CCCCcEEEEEEeccCCccCccceEEecCCC--CCC-ceEEEcCC-- Confidence 3567777644 45899986543 4444433322 223 89999999995 12112 26643332 211 23334332 Q ss_pred CceeEEEEEEecCCCcceeEeeecccCCCccceEEEEEEe--CCeeEEEEcccccceeeeccCCcccccCCCceEE-Eec Q FBpp0290335 127 NSYNVSLVYTQADQNIGRKLASFGVAHVPDKWNSIALQVL--SDKVSFYYDCELRNTTLVTREPIELVFDSASTLY-IGQ 203 (971) Q Consensus 127 ~~~~i~L~Y~~~~~~~~~~~~sF~v~l~dg~WHrlaLsV~--g~~VtLyvDC~~~~t~~l~r~p~~l~~~~~~~l~-IGq 203 (971) + +.+...+..+. .+...|. .+.+++||+|++.+. +..+.||||-+++.+..+.... . +..+..+. +|. T Consensus 940 -~--L~Ws~~DsnGn--~ksI~~D-dI~~GkW~HVAITyDrsG~aVKLYINGeLVas~sisgll-d--I~ssg~IsFIG~ 1010 (1196) T 3v0a_B 940 -G--LVFNMIDSNGN--EKNIYLS-DVSNNSWHYITISVDRLKEQLLIFIDDNLVANESIKEIL-N--IYSSNIISLLSE 1010 (1196) T ss_dssp -E--EEEEEECTTCC--EEEEEEC-SCCSSSCEEEEEEEETTTTEEEEEETTEEEEEEECTTCC-C--CCCCSEEEECCT T ss_pred -c--eEEEEEeCCCc--cceeecc-CCCCCCeEEEEEEEeCCCCEEEEeECCEEccccccccCc-c--cccCCceeEecc Confidence 2 33433333221 2333443 456899999999998 5667999999998776444321 1 12233443 442 Q ss_pred cCCccCcccceeeeeeEEecCCcc Q FBpp0290335 204 AGSIIGGKFEGYLEKINVYGNPDA 227 (971) Q Consensus 204 ~g~~~~~~F~G~LQ~L~I~~dp~~ 227 (971) .|.|.|.+|||+..+.. T Consensus 1011 -------nFnG~IDEVRIYNRALS 1027 (1196) T 3v0a_B 1011 -------NNPSYIEGLTILNKPTT 1027 (1196) T ss_dssp -------TCCEEEEEEEEESSCCC T ss_pred -------cCCcEeeeEEEECCcCC Confidence 18999999999976543No 43>2wjs_A Laminin subunit alpha-2; integrin, secreted, coiled coil, glycoprotein, laminin EGF-like domain, extracellular matrix, laminin G-like domain; HET: NAG; 2.80A {Mus musculus} Probab=96.73 E-value=0.02 Score=69.22 Aligned_cols=126 Identities=17% Similarity=0.265 Sum_probs=79.8 Q ss_pred ceEEEEEEeecCCCCceEEEEEeCCCCeEEEEEEEcccccCceeEEEEEEecCCCcceeEeeecccCCCccceEEEEEEe Q FBpp0290335 87 EFAILITFRQSSLKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLASFGVAHVPDKWNSIALQVL 166 (971) Q Consensus 87 eFSilaT~R~~~~~~g~LfsV~~~~~~~~qlgl~lsg~~~~~~~i~L~Y~~~~~~~~~~~~sF~v~l~dg~WHrlaLsV~ 166 (971) .++|.+.||.. ...+.||...+. +...+|.|+|..-. +.|.|...+.. ..+.-...+.|++||+|.|... T Consensus 226 ~~~isl~FrT~-~~~GlLl~~~~~-~~~d~l~L~L~~G~-----l~~~~~~g~~~---~~l~~~~~lnDg~WH~V~v~~~ 295 (608) T 2wjs_A 226 ISTVMFKFRTF-SSSALLMYLATR-DLKDFMSVELSDGH-----VKVSYDLGSGM---TSVVSNQNHNDGKWKAFTLSRI 295 (608) T ss_dssp EEEEEEEEEES-CSEEEEEEEECT-TSSSEEEEEEETTE-----EEEEEECSSCE---EEEEEEEECCSSSCEEEEEEEE T ss_pred cceEEEEEEeC-CCCeEEEEecCC-CCCceEEEEEECCE-----EEEEEECCCCc---eEeecCccccCCCeEEEEEEEc Confidence 46777777754 456788887764 34578888886542 67777543321 1222245678999999999999 Q ss_pred CCeeEEEE-cccccceeee----ccCCcccccCCCceEEEeccCC-------ccCcccceeeeeeEEe Q FBpp0290335 167 SDKVSFYY-DCELRNTTLV----TREPIELVFDSASTLYIGQAGS-------IIGGKFEGYLEKINVY 222 (971) Q Consensus 167 g~~VtLyv-DC~~~~t~~l----~r~p~~l~~~~~~~l~IGq~g~-------~~~~~F~G~LQ~L~I~ 222 (971) ++.++|.| ||.......+ +.....+++.....||||-.-. .....|.|=|++|+|- T Consensus 296 ~~~~~l~vdd~~~~~~~~~~~~~~g~~~~l~l~~~~~lylGG~p~~~~~~~~~~~~~F~GCi~~v~in 363 (608) T 2wjs_A 296 QKQANISIVDIDSNQEENVATSSSGNNFGLDLKADDKIYFGGLPTLRNLRPEVNVKKYSGCLKDIEIS 363 (608) T ss_dssp TTEEEEEEEETTTCCEEEEEEECCSSCCCCCCCTTCEEEESCCCCCSCCCTTCCCCCCEEEEEEEEET T ss_pred ccEEEEEEEeccCCcccccccccCCcccccccCCCceEEEcCcccccccCccccccCcCccccccEEC Confidence 99999998 6654322111 1112223344467899984311 0123699999999883No 44>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A* Probab=96.70 E-value=0.018 Score=75.52 Aligned_cols=122 Identities=15% Similarity=0.141 Sum_probs=80.6 Q ss_pred EEEEEEeecCCCCceEEEEEeCCCCeEEEEEEEcccccCceeEEEEEEecCCCcceeEeee-cccCCCccceEEEEEEeC Q FBpp0290335 89 AILITFRQSSLKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLASF-GVAHVPDKWNSIALQVLS 167 (971) Q Consensus 89 SilaT~R~~~~~~g~LfsV~~~~~~~~qlgl~lsg~~~~~~~i~L~Y~~~~~~~~~~~~sF-~v~l~dg~WHrlaLsV~g 167 (971) .|.+.|| ++...+.||.+.+......+|.|.|..- + |.|.|..... ...+.+ ...+.||+||+|.+.-.+ T Consensus 1084 ~i~l~fr-T~~~~g~Ll~~~s~~~~~~~l~l~l~~G---~--l~~~~~~g~~---~~~~~~~~~~v~DG~wH~v~~~r~~ 1154 (1245) T 3qcw_A 1084 RLAIGFS-TVQKEAVLVRVDSSSGLGDYLELHIHQG---K--IGVKFNVGTD---DIAIEESNAIINDGKYHVVRFTRSG 1154 (1245) T ss_dssp EEEEEEE-BCCSSEEEEEEEECTTCCCEEEEEEETT---E--EEEEEESSSC---CEEEECCSCCCBSSSCEEEEEEEET T ss_pred eEEEEEE-EecCCeEEEEEeccCCCCceEEEEEECC---E--EEEEEECCCC---ceEeecCceEcCCCcEEEEEEEEcC Confidence 4455555 4566789999877532346777777543 2 6777764332 123333 567889999999999999 Q ss_pred CeeEEEEcccccceeeeccCCcccccCCCceEEEeccCCccCcccceeeeeeEEe Q FBpp0290335 168 DKVSFYYDCELRNTTLVTREPIELVFDSASTLYIGQAGSIIGGKFEGYLEKINVY 222 (971) Q Consensus 168 ~~VtLyvDC~~~~t~~l~r~p~~l~~~~~~~l~IGq~g~~~~~~F~G~LQ~L~I~ 222 (971) ..++|+||=..+.+. +........++....||||.. .....|+|-|+.++|- T Consensus 1155 ~~~~l~VD~~~~~~~-~~~g~~~~~~~~~~~l~lGg~--~~~~~F~Gcl~~v~~n 1206 (1245) T 3qcw_A 1155 GNATLQVDSWPVIER-YPAGRQLTIFNSQATIIIGGK--EQGQPFQGQLSGLYYN 1206 (1245) T ss_dssp TEEEEEETTSCCEEE-CCCSCCCCCBCSEEEEEESST--TTTCCCCEEEEEEEET T ss_pred CEEEEEECCccceee-cCCCcceEEeecCCeEEECCc--cCCCCceEEEeEEEEC Confidence 999999998765442 221111112445678999854 2345799999999873No 45>3rsj_A BONT/F; clostridium botulinum type F, ganglioside binding site, GD1A; HET: NGA GAL SIA; 2.00A {Clostridium botulinum} SCOP: b.29.1.0 b.42.4.0 PDB: 3fuq_A Probab=96.64 E-value=0.11 Score=58.53 Aligned_cols=163 Identities=9% Similarity=0.110 Sum_probs=99.7 Q ss_pred CCcEEEeccCCCCcceEecCCcc----ccCCccccCCCCCC-ceEEEEEEeecCCC-------CceEEEEEeCCCCeEEE Q FBpp0290335 50 FAGIEFGEAEDGFPAFRFLQTAD----VKSPYRMLLPEKLY-EFAILITFRQSSLK-------GGYLFSVVNPLDTVVQL 117 (971) Q Consensus 50 ~~GV~~v~G~d~~pAy~f~~~a~----l~~pt~~lfP~~l~-eFSilaT~R~~~~~-------~g~LfsV~~~~~~~~ql 117 (971) ...|.+|.| -.-|+.|..... +.+ +..++-..++ +|||.+++|..... .-+||.-++. ++.-+ T Consensus 29 ~g~v~lv~g--~~~a~~L~~s~~s~i~I~~-~ndii~n~~~~nFSIsFWvri~k~~t~~n~~~e~tII~~~~~-nNsGW- 103 (413) T 3rsj_A 29 NGDVYIYST--NRNQFGIYSSKPSEVNIAQ-NNDIIYNGRYQNFSISFWVRIPKYFNKVNLNNEYTIIDCIRN-NNSGW- 103 (413) T ss_dssp EECCEECSS--CTTEEEEESSSSEEEEEEC-CTTTCCCCSSCCEEEEEEEECCCCCSGGGTTCCEEEEEEEET-TTEEE- T ss_pred CCceEEEec--CCcEEEEccCCCcceEEec-CcceeeccccCcEEEEEEEEcCCcccccccCCcceEEEeeec-CCCCc- Confidence 356788888 355666665444 443 3444445565 99999999986652 3568877753 34322 Q ss_pred EEEEcccccCceeEEEEEEecCCCcceeEeeecc----cCC--CccceEEEEEEe-CCeeEEEEcccccceeeeccCCcc Q FBpp0290335 118 GVHLSPVVKNSYNVSLVYTQADQNIGRKLASFGV----AHV--PDKWNSIALQVL-SDKVSFYYDCELRNTTLVTREPIE 190 (971) Q Consensus 118 gl~lsg~~~~~~~i~L~Y~~~~~~~~~~~~sF~v----~l~--dg~WHrlaLsV~-g~~VtLyvDC~~~~t~~l~r~p~~ 190 (971) .|.+... .|+++-.+.....+.+-|.+ .+. -++||.|+++|. -....+|+|-+++.+..+.-.. T Consensus 104 ~Isl~~n-------~liWtl~Ds~g~~k~i~f~y~~~~~i~dyiNkW~~VtIt~dRlg~a~IYINGkLi~~~~I~~l~-- 174 (413) T 3rsj_A 104 KISLNYN-------KIIWTLQDTAGNNQKLVFNYTQMISISDYINKWIFVTITNNRLGNSRIYINGNLIDEKSISNLG-- 174 (413) T ss_dssp EEEEETT-------EEEEEEECTTSCEEEEEEECCSBSSSCSSTTSEEEEEEEECTTSEEEEEETTEEEEEEECTTCC-- T ss_pred EEEECCC-------eEEEEEEcCCCcceeEEEecccccchhhccCceEEEEEEEcCCCceEEEECCEEeeccChhhhc-- Confidence 2333332 24444334333345555532 222 389999999999 6788999999999887555421 Q ss_pred cccCCCceEEEeccCCccCcccceeeeeeEEecCCcccc Q FBpp0290335 191 LVFDSASTLYIGQAGSIIGGKFEGYLEKINVYGNPDAIN 229 (971) Q Consensus 191 l~~~~~~~l~IGq~g~~~~~~F~G~LQ~L~I~~dp~~a~ 229 (971) ++..+..+.++--+... .+| +.|.+|+|+..+-..+ T Consensus 175 -~I~ss~~I~~~vd~~~d-~~~-~~Id~l~If~k~Lt~~ 210 (413) T 3rsj_A 175 -DIHVSDNILFKIVGCND-TRY-VGIRYFKVFDTELGKT 210 (413) T ss_dssp -CCCCCSEEEEEEESCCS-SCE-EEEEEEEEESSCCCHH T ss_pred -ceeecCeEEEEecccCC-Cce-EEEeeEEEecccCCHH Confidence 22335566666322222 367 9999999997765443No 46>3n7l_A Neurotoxin; HCR/D-SA, ganglioside binding loop; 2.00A {Clostridium botulinum} SCOP: b.29.1.0 b.42.4.0 PDB: 3azw_A 3azv_A 4isr_A 4isq_A 3n7m_A 4fvv_A* 3n7k_A 3r4s_A* 3r4u_A Probab=96.63 E-value=0.011 Score=68.37 Aligned_cols=164 Identities=12% Similarity=0.192 Sum_probs=88.8 Q ss_pred CcEEEeccCCCCcceEecCCcc------ccCCccccCCCCCC-ceEEEEEEeecC---C-CCceEEEEEeCCCCeEEEEE Q FBpp0290335 51 AGIEFGEAEDGFPAFRFLQTAD------VKSPYRMLLPEKLY-EFAILITFRQSS---L-KGGYLFSVVNPLDTVVQLGV 119 (971) Q Consensus 51 ~GV~~v~G~d~~pAy~f~~~a~------l~~pt~~lfP~~l~-eFSilaT~R~~~---~-~~g~LfsV~~~~~~~~qlgl 119 (971) ..|+++.| ...|+.|..... |..|...+. ..+. +|||.+++|+.. . ....||+..+. + .-..+ T Consensus 32 g~v~~~~G--~g~Al~l~g~~~~~s~v~V~lPn~li~-n~~~~~FTVSfWVK~~~~~t~~~~~~If~~~~~--~-sGW~I 105 (424) T 3n7l_A 32 GNVQLNPI--FPFDFKLGSSGDDRGKVIVTQNENIVY-NAMYESFSISFWIRINKWVSNLPGYTIIDSVKN--N-SGWSI 105 (424) T ss_dssp SBCEECSS--TTCCEEEESCSTTBCEEEEECCHHHHH-TTTTTEEEEEEEEEEETCCTTCCCEEEEEEESS--S-CEEEE T ss_pred CceEEecC--CCcEEEEccCCCccceEEEECChHHhc-ccCCCcEEEEEEeccccccCCCCccEEEeccCC--C-CCeEE Confidence 45888888 566888875432 333433222 2334 899999999876 2 23557776642 2 22334 Q ss_pred EEcccccCceeEEEEEEecCCCcceeEeee------cccCCCccceEEEEEEe-CCeeEEEEcccccceeeeccC----- Q FBpp0290335 120 HLSPVVKNSYNVSLVYTQADQNIGRKLASF------GVAHVPDKWNSIALQVL-SDKVSFYYDCELRNTTLVTRE----- 187 (971) Q Consensus 120 ~lsg~~~~~~~i~L~Y~~~~~~~~~~~~sF------~v~l~dg~WHrlaLsV~-g~~VtLyvDC~~~~t~~l~r~----- 187 (971) .+... + +.+......+. .+...| .+++. ++||+|++.+. ...+.+|||-+++.+..+... T Consensus 106 ~l~~n---~--l~ws~~d~~G~--~~~iwfdy~~~~~~~l~-n~W~HVAvTyD~~g~~kiYINGelv~s~~i~~~~~i~~ 177 (424) T 3n7l_A 106 GIISN---F--LVFTLKQNENS--EQDINFSYDISKNAAGY-NKWFFVTITTNMMGNMMIYINGKLIDTIKVKELTGINF 177 (424) T ss_dssp EEETT---E--EEEEEEEETTE--EEEEEEECCGGGCTTCC-CSCEEEEEEEETTSEEEEEETTEEEEEEECCCCTTCCC T ss_pred EeCCC---c--eEEEEecCCCc--cceeeecccccccCCCC-CceEEEEEEECCCCCEEEEECCEEeeeeeecccccccc Confidence 33221 2 23332222111 111112 23455 99999999999 678899999988766533211 Q ss_pred CcccccCCCceEEEeccCCccCcccceeeeeeEEecCCcccc Q FBpp0290335 188 PIELVFDSASTLYIGQAGSIIGGKFEGYLEKINVYGNPDAIN 229 (971) Q Consensus 188 p~~l~~~~~~~l~IGq~g~~~~~~F~G~LQ~L~I~~dp~~a~ 229 (971) +..+.+.....+.||+. ......|.|.|.+|||+-.+..++ T Consensus 178 ~~~i~~~~g~~~~iG~~-~~~d~~f~G~IDE~RIynrALTae 218 (424) T 3n7l_A 178 SKTITFQMNKIPNTGLI-TSDSDNINMWIRDFYIFAKELDDK 218 (424) T ss_dssp CSEEEEEEEECTTSCCC-C----CCEEEEEEEEEESSCCCHH T ss_pred CceeeeccCcceeeccc-ccCCCCCcEEEeEEEEECCcCCHH Confidence 10110011111122332 111345889999999997765443No 47>3pme_A Type C neurotoxin; structural genomics, seattle structural genomics center for infectious disease, ssgcid, botulinum neurotoxin; 1.56A {Clostridium botulinum} SCOP: b.29.1.0 b.42.4.0 PDB: 4f83_A* 3ogg_A 3n7j_A 3obr_A 3obt_A* 3rmx_A 3rmy_A Probab=96.46 E-value=0.054 Score=61.58 Aligned_cols=165 Identities=13% Similarity=0.178 Sum_probs=98.1 Q ss_pred CcEEEeccCCCCcceEecCCcc---ccCCccccCCCCCC-ceEEEEEEeecCCCC--ceEEEEEeCCCCeEEEEEEEccc Q FBpp0290335 51 AGIEFGEAEDGFPAFRFLQTAD---VKSPYRMLLPEKLY-EFAILITFRQSSLKG--GYLFSVVNPLDTVVQLGVHLSPV 124 (971) Q Consensus 51 ~GV~~v~G~d~~pAy~f~~~a~---l~~pt~~lfP~~l~-eFSilaT~R~~~~~~--g~LfsV~~~~~~~~qlgl~lsg~ 124 (971) -.|+++.| -..||.|..... +.+ +..++-+.++ +|||.+++|..+.+. -..++|.+......-..|-+... T Consensus 31 G~v~~~~G--~g~A~~L~gs~~~~~i~~-~ndii~n~~~nsFSIsFWvr~~k~~t~~~~~~tIin~k~~nsGW~Isl~~n 107 (420) T 3pme_A 31 GDVQVNTI--YTNDFKLSSSGDKIIVNL-NNNILYSAIYENSSVSFWIKISKDLTNSHNEYTIINSIKQNSGWKLCIRNG 107 (420) T ss_dssp SCCEESSS--STTEEEECSTTCEEEEEC-CGGGGSSGGGTEEEEEEEEEECHHHHTCCSEEEEEEEEETTEEEEEEEETT T ss_pred CceEEEec--CCcEEEecCCCccEEEec-CcchhhccccCceEEEEEEECCCccccCCCceEeEeeccCCCCeEEEECCC Confidence 45788877 577888886655 333 3344455666 999999999865411 23444443322223344444332 Q ss_pred ccCceeEEEEEEecCCCcceeEeeec------ccCCCccceEEEEEEe-CCeeEEEEcccccceeeeccCCcccccCCCc Q FBpp0290335 125 VKNSYNVSLVYTQADQNIGRKLASFG------VAHVPDKWNSIALQVL-SDKVSFYYDCELRNTTLVTREPIELVFDSAS 197 (971) Q Consensus 125 ~~~~~~i~L~Y~~~~~~~~~~~~sF~------v~l~dg~WHrlaLsV~-g~~VtLyvDC~~~~t~~l~r~p~~l~~~~~~ 197 (971) .++++-.+.....+...|. ++-..++||+|++++. -...++|+|-+++.+..+.-.. . +..+. T Consensus 108 -------~liw~l~dsngn~~~i~f~y~~~~~I~d~~nkW~~VtIs~Drlg~~~IYING~lv~sk~I~~lg-~--I~~sn 177 (420) T 3pme_A 108 -------NIEWILQDINRKYKSLIFDYSESLSHTGYTNKWFFVTITNNIMGYMKLYINGELKQSERIEDLD-E--VKLDK 177 (420) T ss_dssp -------EEEEEEECTTSCEEEEEEECSTTTCTTSCTTSCEEEEEEEETTSEEEEEETTEEEEEEECTTSC-C--CCCCS T ss_pred -------eEEEEEEecCCceeeEEEecccccccccccCceEEEEEEECCCCCEEEEECCEEeeecchhhcc-c--cccCC Confidence 1444444432233444443 2212389999999999 5677999999999888665521 1 22233 Q ss_pred eEEEeccCCccCcccceeeeeeEEecCCcccc Q FBpp0290335 198 TLYIGQAGSIIGGKFEGYLEKINVYGNPDAIN 229 (971) Q Consensus 198 ~l~IGq~g~~~~~~F~G~LQ~L~I~~dp~~a~ 229 (971) .+-++-.+ .....+++.|.+|+|+..+-..+ T Consensus 178 ~i~l~v~~-~~d~~~~~~Id~f~Ifnk~Lt~~ 208 (420) T 3pme_A 178 TIVFGIDE-NIDENQMLWIRDFNIFSKELSNE 208 (420) T ss_dssp EEEESCCS-CCCTTCCEEEEEEEEESSCCCHH T ss_pred eEEEEEcc-cCCCccceeeeeEEEecccCCHH Confidence 44444321 22246889999999997775443No 48>1epw_A Bontoxilysin B, botulinum neurotoxin type B; zinc, metalloprotease, transmembrane, hydrolase; 1.90A {Clostridium botulinum} SCOP: b.29.1.6 b.42.4.2 d.92.1.7 h.4.2.1 PDB: 1f31_A* 1g9a_A* 1g9b_A* 1g9c_A* 1g9d_A* 1i1e_A* 1s0b_A 1s0c_A 1s0d_A 1s0e_A 1s0f_A 1s0g_A 2np0_A 3zuq_A 2etf_A 2xhl_A 1z0h_A 4kbb_A* 2nm1_A 1f82_A ... Probab=96.22 E-value=0.11 Score=66.09 Aligned_cols=153 Identities=10% Similarity=0.188 Sum_probs=88.4 Q ss_pred CCcceEecCCcc----ccCCccccCCCCCC-ceEEEEEEeecCC-CC---------ceEEEEEeCCCCeEEEEEEEcccc Q FBpp0290335 61 GFPAFRFLQTAD----VKSPYRMLLPEKLY-EFAILITFRQSSL-KG---------GYLFSVVNPLDTVVQLGVHLSPVV 125 (971) Q Consensus 61 ~~pAy~f~~~a~----l~~pt~~lfP~~l~-eFSilaT~R~~~~-~~---------g~LfsV~~~~~~~~qlgl~lsg~~ 125 (971) ...|+.|..... +..+...++ .... +|||.+++|+... .. ..||+-.+.. ..-++.+ .. T Consensus 894 ~GkAl~FdGssgS~I~V~LPnnli~-ns~~d~FTISFWVK~~s~~t~~i~~f~~ne~tfIs~~~nn-sGW~ISL--ed-- 967 (1290) T 1epw_A 894 DKNQFKLTSSANSKIRVTQNQNIIF-NSVFLDFSVSFWIRIPKYKNDGIQNYIHNEYTIINCMKNN-SGWKISI--RG-- 967 (1290) T ss_dssp TTSEEEECSSTTCCEEEECCTTSSC-CCSSCCEEEEEEEECCCCCGGGHHHHHHCEEEEEEEEETT-EEEEEEE--ET-- T ss_pred cCceEEecCCCCcceEEEcCccccc-CCCCCCEEEEEEeccccccCccccccccccceEEecccCC-CCceEEe--cC-- Confidence 457888886543 443333222 1223 8999999999775 22 3456444321 2223332 22 Q ss_pred cCceeEEEEEEecCCCcceeEeeec----ccCC--CccceEEEEEEeCCeeEEEEcccccceeeeccCCcccccCCCceE Q FBpp0290335 126 KNSYNVSLVYTQADQNIGRKLASFG----VAHV--PDKWNSIALQVLSDKVSFYYDCELRNTTLVTREPIELVFDSASTL 199 (971) Q Consensus 126 ~~~~~i~L~Y~~~~~~~~~~~~sF~----v~l~--dg~WHrlaLsV~g~~VtLyvDC~~~~t~~l~r~p~~l~~~~~~~l 199 (971) ++ +.+...+..+. .....|. ..+. .++||+|++.+....+++|||-+++.+..+.... . +.....+ T Consensus 968 -nt--L~wsl~DsnGn--~~~Iwfd~~t~~~Ipdy~NkW~HVAITyD~g~vKIYINGeLVas~sitgL~-d--I~ss~~I 1039 (1290) T 1epw_A 968 -NR--IIWTLIDINGK--TKSVFFEYNIREDISEYINRWFFVTITNNLNNAKIYINGKLESNTDIKDIR-E--VIANGEI 1039 (1290) T ss_dssp -TE--EEEEEECTTCC--EEEEEEECCSSCSSCSSTTSCEEEEEEECSSEEEEEETTEEEEEEECSSCC-C--CCCCSEE T ss_pred -Ce--EEEEEecCCCC--cceeEEecccccCCCCCCCceEEEEEEEcCCeEEEEECCEEeeccccccCc-c--ccccCee Confidence 12 33333322111 1112232 1222 5899999999999999999999988776443322 2 2234578 Q ss_pred EEeccCCccCcccceeeeeeEEecCCccc Q FBpp0290335 200 YIGQAGSIIGGKFEGYLEKINVYGNPDAI 228 (971) Q Consensus 200 ~IGq~g~~~~~~F~G~LQ~L~I~~dp~~a 228 (971) .+|..+.. ...|.|.|.+|||+..+..+ T Consensus 1040 ~LGv~n~~-D~~F~G~IDEfRIYNRALSa 1067 (1290) T 1epw_A 1040 IFKLDGDI-DRTQFIWMKYFSIFNTELSQ 1067 (1290) T ss_dssp EEEEEESC-CTTCCEEEEEEEEESSCCCH T ss_pred EEEecCCC-CcCcceEeeeEEEECCcCCH Confidence 88764322 24689999999999765443No 49>2nyy_A Botulinum neurotoxin type A; botulinum, neurotoxin, FAB, protein antibody complex, toxin- system complex; 2.61A {Clostridium botulinum} SCOP: b.29.1.6 b.42.4.2 d.92.1.7 h.4.2.1 PDB: 2nz9_A 3bta_A 3v0a_A* 3v0b_A 3v0c_A 3zus_A 3zur_A Probab=96.06 E-value=0.16 Score=63.92 Aligned_cols=165 Identities=10% Similarity=0.178 Sum_probs=98.4 Q ss_pred CCcEEEeccCCCCcceEecCCcc----ccCCccccCCCCCC-ceEEEEEEeecCCCC----ceEEEEEeCCCCeEEEEEE Q FBpp0290335 50 FAGIEFGEAEDGFPAFRFLQTAD----VKSPYRMLLPEKLY-EFAILITFRQSSLKG----GYLFSVVNPLDTVVQLGVH 120 (971) Q Consensus 50 ~~GV~~v~G~d~~pAy~f~~~a~----l~~pt~~lfP~~l~-eFSilaT~R~~~~~~----g~LfsV~~~~~~~~qlgl~ 120 (971) .-.|+++.| -.-||.|..... +. -...++-+.++ +|||.+++|..+.+. -..++|.+......-+.+- T Consensus 900 ~G~V~~v~G--ngnA~~L~gs~~S~~~I~-~~ndii~n~~~~nFSISFWvRipk~~~~~n~~~eyTIIn~k~nNsGW~I~ 976 (1295) T 2nyy_A 900 GSKVNFDPI--DKNQIQLFNLESSKIEVI-LKNAIVYNSMYENFSTSFWIRIPKYFNSISLNNEYTIINCMENNSGWKVS 976 (1295) T ss_dssp CTTEEECTT--CTTCEEEESSTTSCEEEE-ECGGGCCTTTTSEEEEEEEEECCCCCSGGGGGCCEEEEEEEETTEEEEEE T ss_pred CCceEEEec--CCcEEEecCCCCcceEEe-cCcchhcccccCceEEEEEEEcCCCCcccccCCceeeEeeccCCCCeEEE Confidence 356778877 467888775333 33 24444556676 999999999976663 2345555432222334444 Q ss_pred EcccccCceeEEEEEEecCCCcceeEeeec------ccCCCccceEEEEEEe-CCeeEEEEcccccceeeeccCCccccc Q FBpp0290335 121 LSPVVKNSYNVSLVYTQADQNIGRKLASFG------VAHVPDKWNSIALQVL-SDKVSFYYDCELRNTTLVTREPIELVF 193 (971) Q Consensus 121 lsg~~~~~~~i~L~Y~~~~~~~~~~~~sF~------v~l~dg~WHrlaLsV~-g~~VtLyvDC~~~~t~~l~r~p~~l~~ 193 (971) |... .++++-.+.....+...|. ++...++||+|++++. -...++|+|-+++.+..+.-.. .+ T Consensus 977 L~~n-------~liWtl~DsNgn~k~i~f~y~~~~~I~dyiNkW~hVTIt~DRlg~a~IYINGkLv~sk~I~~Lg-~I-- 1046 (1295) T 2nyy_A 977 LNYG-------EIIWTLQDTQEIKQRVVFKYSQMINISDYINRWIFVTITNNRLNNSKIYINGRLIDQKPISNLG-NI-- 1046 (1295) T ss_dssp EETT-------EEEEEEECSSSCEEEEEEECCSBSSSCSSTTSCEEEEEEEETTSEEEEEETTEEEEEEECTTCC-CC-- T ss_pred eCCC-------cEEEEEEecCCcceeeEEecccccCcccccCceEEEEEEECCCCCeEEEECCEEeeccccccCC-ce-- Confidence 4332 1333333322223333443 2222389999999999 4677999999999888665532 22 Q ss_pred CCCceEEEeccCCccCcccceeeeeeEEecCCccc Q FBpp0290335 194 DSASTLYIGQAGSIIGGKFEGYLEKINVYGNPDAI 228 (971) Q Consensus 194 ~~~~~l~IGq~g~~~~~~F~G~LQ~L~I~~dp~~a 228 (971) ..+..+-++--+ +....|.+.|.+|+|+..+-.. T Consensus 1047 ~ssn~Is~gv~g-~~d~n~~g~ID~F~IfnK~Lt~ 1080 (1295) T 2nyy_A 1047 HASNNIMFKLDG-CRDTHRYIWIKYFNLFDKELNE 1080 (1295) T ss_dssp CCCSEEEEEEES-CCCTTCEEEEEEEEEESSCCCH T ss_pred eecCeEEEEEec-cCCCCceeeEeeEEEecCcCCH Confidence 223344443111 2235799999999999776443No 50>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A* Probab=95.90 E-value=0.063 Score=70.47 Aligned_cols=121 Identities=15% Similarity=0.249 Sum_probs=77.9 Q ss_pred ceEEEEEEeecCCCCceEEEEEeCCCCeEEEEEEEcccccCceeEEEEEEecCCCcceeEee--ecccCCCccceEEEEE Q FBpp0290335 87 EFAILITFRQSSLKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLAS--FGVAHVPDKWNSIALQ 164 (971) Q Consensus 87 eFSilaT~R~~~~~~g~LfsV~~~~~~~~qlgl~lsg~~~~~~~i~L~Y~~~~~~~~~~~~s--F~v~l~dg~WHrlaLs 164 (971) ++.|.+.||... ..+.||..... ...+|.|+|..-. |.|.|....+. ..++ ....+.|++||+|.|. T Consensus 859 ~~~is~~frT~~-~~GlLl~~~~~--~~dfl~l~L~~G~-----l~~~~~~g~g~---~~~~~~s~~~vnDG~WH~V~~~ 927 (1245) T 3qcw_A 859 SMHLFFQFKTTS-LDGLILYNSGD--GNDFIVVELVKGY-----LHYVFDLGNGA---NLIKGSSNKPLNDNQWHNVMIS 927 (1245) T ss_dssp CEEEEEEEECSC-SCEEEEEEEES--TTCEEEEEEETTE-----EEEEEESSSCC---EEEECCCSSCSCSSSCEEEEEE T ss_pred eEEEEEEEEECC-CCEEEEEeCCC--CCceEEEEEECCE-----EEEEEECCCCc---EEEEecCccccCCCCeEEEEEE Confidence 677777887655 55677655442 3578888886542 77777644332 2222 2567889999999999 Q ss_pred EeCCe-eEEEEcccccceeeeccCCcccccCCCceEEEeccCCc----------cCcccceeeeeeEEe Q FBpp0290335 165 VLSDK-VSFYYDCELRNTTLVTREPIELVFDSASTLYIGQAGSI----------IGGKFEGYLEKINVY 222 (971) Q Consensus 165 V~g~~-VtLyvDC~~~~t~~l~r~p~~l~~~~~~~l~IGq~g~~----------~~~~F~G~LQ~L~I~ 222 (971) ....+ .+|.||........ .. .. .++....||||-.... ....|+|=|++|+|- T Consensus 928 ~~~~~~~~L~VD~~~~~~~~-~~-~~--~l~~~~~lyvGG~~~~~~~~~~~~~~~~~~F~GCi~~l~in 992 (1245) T 3qcw_A 928 RDTSNLHTVKIDTKITTQIT-AG-AR--NLDLKSDLYIGGVAKETYKSLPKLVHAKEGFQGCLASVDLN 992 (1245) T ss_dssp ECTTCEEEEEETTEEEEEEC-CC-CC--CCCEEEEEEESCCCGGGGGGCCTTCCCSSBCCEEEEEEEET T ss_pred EcCCceEEEEECCEeeeeec-CC-cc--eeccCCCeEEccccccccccchhhcccccCccceecceeEC Confidence 98876 58999986543221 11 11 2344567999853210 124699999999983No 51>2vxr_A Botulinum neurotoxin type G; hydrolase, ganglioside, protease, recepto secreted, binding domain, metalloprotease; 1.90A {Clostridium botulinum} SCOP: b.29.1.0 b.42.4.0 PDB: 3mpp_G Probab=95.66 E-value=0.2 Score=57.05 Aligned_cols=163 Identities=13% Similarity=0.221 Sum_probs=96.2 Q ss_pred CCcEEEeccCCCCcceEecCCcc----ccCCccccCCCCCC-ceEEEEEEeecCC-CC---------ceEEEEEeCCCCe Q FBpp0290335 50 FAGIEFGEAEDGFPAFRFLQTAD----VKSPYRMLLPEKLY-EFAILITFRQSSL-KG---------GYLFSVVNPLDTV 114 (971) Q Consensus 50 ~~GV~~v~G~d~~pAy~f~~~a~----l~~pt~~lfP~~l~-eFSilaT~R~~~~-~~---------g~LfsV~~~~~~~ 114 (971) ...|.+|. -..-||.|..... +.+ ...++-+.++ +|||.+++|.... +. -+||.-++. ... T Consensus 76 ~g~V~lv~--in~na~~L~~s~~s~i~I~~-~ndiiyN~~~~nFSIsFWvRipk~~t~~tn~y~~nEyTII~~~~n-NsG 151 (482) T 2vxr_A 76 GSDVIFND--IGNGQFKLNNSENSNITAHQ-SKFVVYDSMFDNFSINFWVRTPKYNNNDIQTYLQNEYTIISCIKN-DSG 151 (482) T ss_dssp CTTCEEEC--STTCEEEEESSTTCCEEEEC-CTTTSCEESSCCEEEEEEEECCCCCGGGHHHHHHCEEEEEEEEET-TEE T ss_pred CCceEEEE--ccCcEEEecCCCCcceEEEc-ccceeeccccCceEEEEEEEcCCcccccccccccCCceEEEeecC-CCC Confidence 34566665 2345666654433 333 3344445565 9999999998655 22 357766642 122 Q ss_pred EEEEEEEcccccCceeEEEEEEecCCCcceeEeeecc----cCC--CccceEEEEEEe-CCeeEEEEcccccceeeeccC Q FBpp0290335 115 VQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLASFGV----AHV--PDKWNSIALQVL-SDKVSFYYDCELRNTTLVTRE 187 (971) Q Consensus 115 ~qlgl~lsg~~~~~~~i~L~Y~~~~~~~~~~~~sF~v----~l~--dg~WHrlaLsV~-g~~VtLyvDC~~~~t~~l~r~ 187 (971) -.++ +... .|+++-.+.....+.+-|.. .+. -++||.|+++|. -....+|+|-+++....+.-. T Consensus 152 W~Is--l~~n-------~LIWtl~Ds~g~~k~I~f~y~~~~nisdyiNkW~fITITndRlGna~IYINGkLi~~~~I~~L 222 (482) T 2vxr_A 152 WKVS--IKGN-------RIIWTLIDVNAKSKSIFFEYSIKDNISDYINKWFSITITNDRLGNANIYINGSLKKSEKILNL 222 (482) T ss_dssp EEEE--EETT-------EEEEEEECTTSCEEEEEEECCSCCSSCSSTTSCEEEEEEECTTSEEEEEETTEEEEEEECTTC T ss_pred cEEE--ECCC-------eEEEEEEcCCCcceeEEEecccccchhhccCceEEEEEEEcCCCceEEEECCEEeeccChhhh Confidence 3333 3332 24444434333345555542 222 389999999999 678899999999988755442 Q ss_pred CcccccCCCceEEEeccCCccCcccceeeeeeEEecCCcccc Q FBpp0290335 188 PIELVFDSASTLYIGQAGSIIGGKFEGYLEKINVYGNPDAIN 229 (971) Q Consensus 188 p~~l~~~~~~~l~IGq~g~~~~~~F~G~LQ~L~I~~dp~~a~ 229 (971) +.+..+..|.++--+ .....|.+.|.+|+|+..+-..+ T Consensus 223 ---~~I~~s~~I~fgvdn-~~D~n~~i~Id~l~If~keLt~~ 260 (482) T 2vxr_A 223 ---DRINSSNDIDFKLIN-CTDTTKFVWIKDFNIFGRELNAT 260 (482) T ss_dssp ---CCEECCSEEEEEEES-CCCTTCEEEEEEEEEESSCCCHH T ss_pred ---cccccCCeEEEEecc-CCCCCceeEEeeEEEecccCCHH Confidence 123345566665311 12246899999999997765443No 52>2sli_A Intramolecular trans-sialidase; hydrolase, neuraminidase; HET: SKD; 1.80A {Macrobdella decora} SCOP: b.29.1.9 b.68.1.1 PDB: 1sll_A 1sli_A* 3sli_A* 4sli_A* Probab=95.66 E-value=0.19 Score=61.86 Aligned_cols=135 Identities=16% Similarity=0.181 Sum_probs=84.7 Q ss_pred CCceEEEEEEeecC-CCCceEEEEEeCCC--CeEEEEEEEcccccCceeEEEEEEecCCCcceeEeeeccc------CCC Q FBpp0290335 85 LYEFAILITFRQSS-LKGGYLFSVVNPLD--TVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLASFGVA------HVP 155 (971) Q Consensus 85 l~eFSilaT~R~~~-~~~g~LfsV~~~~~--~~~qlgl~lsg~~~~~~~i~L~Y~~~~~~~~~~~~sF~v~------l~d 155 (971) |.+|+|.+.||... .+...||++-+... ...+|-|.+... +. +.|.....+... ...+..+ ..+ T Consensus 34 l~~~Tv~~~~~~~~~~~~~~Lfs~~~~t~~~~n~~~~l~~~~~--g~--~~~~v~~~~~~~---~~~~~~~~~~~~~~~~ 106 (679) T 2sli_A 34 MTQGTIILSYKSTSENGIQSLFSVGNSTAGNQDRHFHIYITNS--GG--IGIELRNTDGVF---NYTLDRPASVRALYKG 106 (679) T ss_dssp CSSEEEEEEEEECCCCSEEEEEEEECCSTTCTTEEEEEEEETT--SC--EEEEEEECTTTC---EEEEEESSCCCSEETT T ss_pred ccccEEEEEEEECCCCCceEEEEecCCCCCCccccEEEEEeCC--CE--EEEEEecCCCce---eEEEecCcccceeccC Confidence 56999999999987 55556999996422 136788887642 22 555554443221 1112111 124 Q ss_pred c-cceEEEEEEeC--CeeEEEEcccccceeeeccCCccc-ccCCCceEEEeccCCcc--CcccceeeeeeEEecCCcc Q FBpp0290335 156 D-KWNSIALQVLS--DKVSFYYDCELRNTTLVTREPIEL-VFDSASTLYIGQAGSII--GGKFEGYLEKINVYGNPDA 227 (971) Q Consensus 156 g-~WHrlaLsV~g--~~VtLyvDC~~~~t~~l~r~p~~l-~~~~~~~l~IGq~g~~~--~~~F~G~LQ~L~I~~dp~~ 227 (971) + .||+|++.... ..++||||-..+.+..+...- .+ .+..-..++||+.-... .-.|.|.|.++.|+..... T Consensus 107 ~~~w~hv~~t~ds~~g~~~lyvnG~~~~~~~~~~~~-~~~~~~g~~~~~iG~~~~~g~~~~~f~G~I~dv~v~~~~ls 183 (679) T 2sli_A 107 ERVFNTVALKADAANKQCRLFANGELLATLDKDAFK-FISDITGVDNVTLGGTKRQGKIAYPFGGTIGDIKVYSNALS 183 (679) T ss_dssp EECCEEEEEEEETTTTEEEEEETTEEEEEEECSSCC-CGGGSTTCCEEEESSEEETTEEESCCCEEEEEEEEESSCCC T ss_pred CCceEEEEEEEecCCCeEEEEECCEEEEeccCCcce-eeccCCCcceEEECCeeCCCcccceEeeEEEEEEEcCCCCC Confidence 3 69999999865 689999999988766554321 11 12334579999841111 1249999999999865543No 53>3ffz_A Botulinum neurotoxin type E; botulinum neurotoxin serotype E, botulism, domain organization, endopeptidase, translocation, hydrolase; 2.65A {Clostridium botulinum} Probab=94.12 E-value=1.4 Score=55.62 Aligned_cols=162 Identities=9% Similarity=0.100 Sum_probs=92.9 Q ss_pred CcEEEeccCCCCcceEecCCcc----ccCCccccCCCCCC-ceEEEEEEeecCCC--------CceEEEEEeCCCCeEEE Q FBpp0290335 51 AGIEFGEAEDGFPAFRFLQTAD----VKSPYRMLLPEKLY-EFAILITFRQSSLK--------GGYLFSVVNPLDTVVQL 117 (971) Q Consensus 51 ~GV~~v~G~d~~pAy~f~~~a~----l~~pt~~lfP~~l~-eFSilaT~R~~~~~--------~g~LfsV~~~~~~~~ql 117 (971) ..|.+|.| -.-|+.|..... +.+ ...++-..++ +|||.+++|....+ .-.||.-++. ++. -. T Consensus 876 g~V~lv~G--n~na~~L~ss~~s~~~I~~-~ndii~n~~~~nFSIsFWvRipk~~~~~~n~~neyTII~~~~~-nNs-GW 950 (1252) T 3ffz_A 876 GDVYKYPT--NKNQFGIYNDKLSEVNISQ-NDYIIYDNKYKNFSISFWVRIPNYDNKIVNVNNEYTIINCMRD-NNS-GW 950 (1252) T ss_dssp ECCEECTT--CTTCEEEESSSCEEEEEEC-CTTTSCCSSCCCCEEEEEEECCCCCSTTTCCCCCEEEEEEEET-TTE-EE T ss_pred CceEEEec--CCceEEeccCCCCceEEec-CcceeeccccCceEEEEEEEcCCcCCcccccCCcceEEEeecC-CCC-Cc Confidence 34566666 345666665332 443 3344445565 99999999985441 1357766643 232 22 Q ss_pred EEEEcccccCceeEEEEEEecCCCcceeEeeecccC------CCccceEEEEEEe-CCeeEEEEcccccceeeeccCCcc Q FBpp0290335 118 GVHLSPVVKNSYNVSLVYTQADQNIGRKLASFGVAH------VPDKWNSIALQVL-SDKVSFYYDCELRNTTLVTREPIE 190 (971) Q Consensus 118 gl~lsg~~~~~~~i~L~Y~~~~~~~~~~~~sF~v~l------~dg~WHrlaLsV~-g~~VtLyvDC~~~~t~~l~r~p~~ 190 (971) .+-+... .|+++-.+.....+.+-|.+.+ .-++||.|+++|. -....+|+|-+++....+.-.+ T Consensus 951 ~I~l~~n-------~LiWtl~Dsngn~k~i~f~y~~~~~i~dyiNkW~fITIt~dRlg~a~IYINGkLi~~~~I~~l~-- 1021 (1252) T 3ffz_A 951 KVSLNHN-------EIIWTLQDNAGINQKLAFNYGNANGISDYINKWIFVTITNDRLGDSKLYINGNLIDQKSILNLG-- 1021 (1252) T ss_dssp EEEEETT-------EEEEEEECSSSCEEEEEEECCCCSBCCSSTTSCEEEEEEECTTSEEEEEETTEEEEEEECTTCC-- T ss_pred EEEeCCC-------eEEEEEEcCCCcceeEEEecccccccccccCceEEEEEEEcCCCceeEEECCEEeeccchhhcc-- Confidence 2233222 1334333332233455554222 1379999999999 5778999999999887655532 Q ss_pred cccCCCceEEEeccCCccCcccceeeeeeEEecCCcccc Q FBpp0290335 191 LVFDSASTLYIGQAGSIIGGKFEGYLEKINVYGNPDAIN 229 (971) Q Consensus 191 l~~~~~~~l~IGq~g~~~~~~F~G~LQ~L~I~~dp~~a~ 229 (971) ++..+..+.++--+... ...+.|.+|+|+..+-..+ T Consensus 1022 -~I~ss~~I~~kl~g~nd--~~~v~Id~l~If~k~Lt~~ 1057 (1252) T 3ffz_A 1022 -NIHVSDNILFKIVNCSY--TRYIGIRYFNIFDKELDET 1057 (1252) T ss_dssp -CCCCCSEEEEEEESCSS--CCEEEEEEEEEESSCCCHH T ss_pred -cceecCeEEEEecCCCC--CcceeEeeeEeecCcCCHH Confidence 23335555552211111 2468999999997765443No 54>4b1m_A Levanase; hydrolase, CBM66; HET: FRU; 1.10A {Bacillus subtilis} PDB: 4b1l_A* 4azz_A Probab=91.12 E-value=1 Score=45.76 Aligned_cols=90 Identities=12% Similarity=0.139 Sum_probs=58.7 Q ss_pred CceEEEEEEeecC----CCCceEEEEEeCCCCeEEEEEEEcccccCceeEEEEEEecCCCcceeEeeecccCCCccceEE Q FBpp0290335 86 YEFAILITFRQSS----LKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLASFGVAHVPDKWNSI 161 (971) Q Consensus 86 ~eFSilaT~R~~~----~~~g~LfsV~~~~~~~~qlgl~lsg~~~~~~~i~L~Y~~~~~~~~~~~~sF~v~l~dg~WHrl 161 (971) .+|.|-+.+|... .+.+.+|.+.. +....+.+.+.... ++ +.| |...++. ...++.....+..++|+++ T Consensus 64 ~df~l~~e~k~~~~~~~~nsGi~~r~~~--d~~~~Y~~~i~~~~-~~--~~l-~~~~~g~-~~~l~~~~~~~~~g~W~~~ 136 (185) T 4b1m_A 64 SDFTYESDITIKDGNGRGAGALMFRSDK--DAKNGYLANVDAKH-DL--VKF-FKFENGA-ASVIAEYKTPIDVNKKYHL 136 (185) T ss_dssp SSEEEEEEEEEEEEEEEEEEEEEEEECT--TSSSEEEEEEETTT-TE--EEE-EEEETTE-EEEEEEEECCCCSSCCEEE T ss_pred CCEEEEEEEEEccCCCCccEEEEEEecC--CCCCeEEEEEECCC-CE--EEE-EEecCCc-eeEeeeccccCCCCCeEEE Confidence 4999999999865 46778887732 23456666666541 22 333 3333321 1123322344557999999 Q ss_pred EEEEeCCeeEEEEccccccee Q FBpp0290335 162 ALQVLSDKVSFYYDCELRNTT 182 (971) Q Consensus 162 aLsV~g~~VtLyvDC~~~~t~ 182 (971) .|.|.+++|++|||-+++.+. T Consensus 137 ~I~~~G~~i~v~vNG~~v~~~ 157 (185) T 4b1m_A 137 KTEAEGDRFKIYLDDRLVIDA 157 (185) T ss_dssp EEEEETTEEEEEETTEEEEEE T ss_pred EEEEECCEEEEEECCEEEEEE Confidence 999999999999999876554No 55>4ccd_A Galactocerebrosidase; hydrolase, krabbe disease, glycosyl hydrolase, galactosidase D-galactal, lysosomal storage disease, enzyme-intermediate; HET: 2DG NAG; 1.97A {Mus musculus} PDB: 4ccc_A* 4cce_A* 4ufh_A* 4ufi_A* 4ufj_A* 4ufk_A* 4ufl_A* 4ufm_A* 3zr5_A* 3zr6_A* Probab=86.52 E-value=3.2 Score=50.79 Aligned_cols=89 Identities=7% Similarity=-0.100 Sum_probs=57.4 Q ss_pred ceEEEEEEeecCC-C--CceEEEEEeCC---CCeEEEEEEEcccccCceeEEEEEEecCCCcceeEeeecccCCCccceE Q FBpp0290335 87 EFAILITFRQSSL-K--GGYLFSVVNPL---DTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLASFGVAHVPDKWNS 160 (971) Q Consensus 87 eFSilaT~R~~~~-~--~g~LfsV~~~~---~~~~qlgl~lsg~~~~~~~i~L~Y~~~~~~~~~~~~sF~v~l~dg~WHr 160 (971) ||+|-+.+|.... . .+.+|.+.+.. +....+.+.|... ++ +.|.. ..+.. ..+++-.+.+..++||+ T Consensus 528 Dy~v~~dv~~~~~~~g~agl~fR~~~~G~~~~~~~gY~~~i~~~--G~--~~l~k-~~~g~--~~La~~~~~~~~~~w~~ 600 (654) T 4ccd_A 528 NMTVQCDVYIETPRSGGVFIAGRVNKGGILIRSATGVFFWIFAN--GS--YRVTA-DLGGW--ITYASGHADVTAKRWYT 600 (654) T ss_dssp EEEEEEEEEECSTTTCEEEEEEEECCCGGGGGGCEEEEEEEETT--TE--EEEEE-ETTCC--SEEEEEECSCCTTCEEE T ss_pred cEEEEEEEEeccCCCCeEEEEEEEcCCCCCccccceEEEEEeCC--Ce--EEEEE-ecCCe--EEEEeeeccCCCCceEE Confidence 9999999998763 2 23456655531 1235566666542 12 44433 33331 23444345677899999 Q ss_pred EEEEEeCCeeEEEEccccccee Q FBpp0290335 161 IALQVLSDKVSFYYDCELRNTT 182 (971) Q Consensus 161 laLsV~g~~VtLyvDC~~~~t~ 182 (971) |.|.|.+++|++|||-+++-+. T Consensus 601 l~v~v~G~~I~v~vdG~~v~~~ 622 (654) T 4ccd_A 601 LTLGIKGYFAFGMLNGTILWKN 622 (654) T ss_dssp EEEEEETTEEEEEETTEEEEEE T ss_pred EEEEEECCEEEEEECCEEEEEE Confidence 9999999999999998766544No 56>1ms9_A Trans-sialidase; trans-glycosylation, protein-acrbohydrate interac beta-propeller, hydrolase; HET: LAT; 1.58A {Trypanosoma cruzi} SCOP: b.29.1.15 b.68.1.1 PDB: 1ms0_A* 1mr5_A* 1ms1_A 1ms4_A 1ms8_A* 1ms3_A* 2ah2_A* 3b69_A* 3opz_A 3pjq_A* 1s0i_A* 1s0j_A* 1ms5_A 1wcs_A 2ags_A* 2a75_A* 2fhr_A* 1n1t_A* 1n1s_A* 1n1v_A* ... Probab=82.75 E-value=23 Score=43.33 Aligned_cols=124 Identities=13% Similarity=0.116 Sum_probs=68.2 Q ss_pred ceEEEEEEeec--CCCCceEEEEE-eCCCCeEEEEEEEcccccCceeEEEEEEecCCCcceeEeeecccCCCccceEEEE Q FBpp0290335 87 EFAILITFRQS--SLKGGYLFSVV-NPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLASFGVAHVPDKWNSIAL 163 (971) Q Consensus 87 eFSilaT~R~~--~~~~g~LfsV~-~~~~~~~qlgl~lsg~~~~~~~i~L~Y~~~~~~~~~~~~sF~v~l~dg~WHrlaL 163 (971) +|+|+||+-.+ ++..-.|+.+. +...+.+.|+|..+..+ + -.+.|.... .. + ...--.++=|+++| T Consensus 495 ~ftlvatv~i~~~p~~~~pl~g~~~~~~~~~~~~glsy~~~~--~--w~~~~~~~~--~~-~----~~~w~~~~~~qv~l 563 (648) T 1ms9_A 495 AFTLVASVTIHEVPKGASPLLGASLDSSGGKKLLGLSYDKRH--Q--WQPIYGSTP--VT-P----TGSWEMGKRYHVVL 563 (648) T ss_dssp EEEEEEEEEECSCCSSCEEEEEEESSSSSSSEEEEEEECTTS--C--EEEEETTSC--CC-C----BSCCCTTCEEEEEE T ss_pred cEEEEEEEEEecCCCCCCceeEEEeccCCCcEEEEEEEeCCC--c--EEEEeCCCC--cc-c----cccccCCceEEEEE Confidence 99999999884 33333455443 21233455555554432 2 223332111 00 0 11122457799999 Q ss_pred EEeCCeeEEEEcccccc-ee--eeccCCcccccCCCceEEEeccCCcc-CcccceeeeeeEEecCC Q FBpp0290335 164 QVLSDKVSFYYDCELRN-TT--LVTREPIELVFDSASTLYIGQAGSII-GGKFEGYLEKINVYGNP 225 (971) Q Consensus 164 sV~g~~VtLyvDC~~~~-t~--~l~r~p~~l~~~~~~~l~IGq~g~~~-~~~F~G~LQ~L~I~~dp 225 (971) .+++.+.++|||-+.+. .. .+.- . ....=+.||||-.+... .....-.+-++.||-.| T Consensus 564 ~l~~~~~s~yvdg~~~~~~~~~~~~~-~---~~~~ishfy~gg~~~~~~~~~~~vtv~nv~lynr~ 625 (648) T 1ms9_A 564 TMANKIGSVYIDGEPLEGSGQTVVPD-E---RTPDISHFYVGGYKRSGMPTDSRVTVNNVLLYNRQ 625 (648) T ss_dssp EEETTEEEEEETTEECTTCCEECSCS-S---CCCCCCEEEESSCSCTTSCCCCCEEEEEEEEESSC T ss_pred EEeCCEEEEEECCEeccccccccccC-C---cccccceEEEcCCCCccCCCCCCEEEEEeEEecCC Confidence 99999999999998873 22 2221 1 11234689998653211 12344567888888544No 57>1pwb_A SP-D, PSP-D, pulmonary surfactant-associated protein D; collectin, C-type lectin, alpha-helical coiled coil, carbohydrate recognition domain; HET: GLC; 1.40A {Homo sapiens} SCOP: d.169.1.1 h.1.1.1 PDB: 1pw9_A* 3ikn_A* 3ikp_A* 3ikq_A* 3ikr_A* 4e52_A* 2rie_A* 2ggx_A* 2ggu_A* 2ork_A* 2orj_A* 2ria_A* 2rib_A* 2ric_A* 2rid_A* 2os9_A* 3dbz_A 3g81_A* 3g83_A* 1b08_A ... Probab=79.85 E-value=0.43 Score=47.36 Aligned_cols=12 Identities=25% Similarity=0.952 Sum_probs=9.2 Q ss_pred ccccCCCceEEE Q FBpp0290335 916 RQSCDSKLIILC 927 (971) Q Consensus 916 ~~~C~~~~~~lC 927 (971) ..+|+..+..+| T Consensus 164 d~~C~~~~~~iC 175 (177) T 1pwb_A 164 DRACGEKRLVVC 175 (177) T ss_dssp EECTTSEEEEEE T ss_pred CccCCCCeeEEE Confidence 357888888888No 58>1pwb_A SP-D, PSP-D, pulmonary surfactant-associated protein D; collectin, C-type lectin, alpha-helical coiled coil, carbohydrate recognition domain; HET: GLC; 1.40A {Homo sapiens} SCOP: d.169.1.1 h.1.1.1 PDB: 1pw9_A* 3ikn_A* 3ikp_A* 3ikq_A* 3ikr_A* 4e52_A* 2rie_A* 2ggx_A* 2ggu_A* 2ork_A* 2orj_A* 2ria_A* 2rib_A* 2ric_A* 2rid_A* 2os9_A* 3dbz_A 3g81_A* 3g83_A* 1b08_A ... Probab=77.66 E-value=0.55 Score=46.58 Aligned_cols=7 Identities=0% Similarity=-0.054 Sum_probs=4.7 Q ss_pred eEEecCC Q FBpp0290335 872 MVWHGSL 878 (971) Q Consensus 872 ~vW~Gs~ 878 (971) .+|.|++ T Consensus 112 ~~WiGl~ 118 (177) T 1pwb_A 112 AAFLSMT 118 (177) T ss_dssp CEECSCB T ss_pred eEEEeeE Confidence 5777765No 59>2zzj_A Glucuronan lyase A; beta-jelly roll; HET: CIT; 1.80A {Trichoderma reesei} Probab=75.07 E-value=36 Score=36.20 Aligned_cols=128 Identities=13% Similarity=0.096 Sum_probs=68.8 Q ss_pred CCcEEEecc--CCCCcceEecCCccccCC----ccccCCCCCC---ceEEEEEEeec-----CCCCceEEEEEeCC-C-- Q FBpp0290335 50 FAGIEFGEA--EDGFPAFRFLQTADVKSP----YRMLLPEKLY---EFAILITFRQS-----SLKGGYLFSVVNPL-D-- 112 (971) Q Consensus 50 ~~GV~~v~G--~d~~pAy~f~~~a~l~~p----t~~lfP~~l~---eFSilaT~R~~-----~~~~g~LfsV~~~~-~-- 112 (971) ...|++|.. .++..|++|.-..+.... +...+...+. ++.+-+.|++. ......|++..... + T Consensus 21 ~~~i~~v~~~~~~G~~alr~~~~~d~~~~~~~RsE~~~~~~~~~g~~~wy~fs~~lp~d~~~~~~~~~iaQw~~~~~~~~ 100 (238) T 2zzj_A 21 QGTVSEVSNVVFKGTSALKMTQTYTPGYTGRYHSEVDHNRGYQRGEEQFYGFAFRLSEDWQFQPQSYNIAQFIANRPGAG 100 (238) T ss_dssp TCEEEEESSSCSSTTCEEEEEEECCTTCCSCCEEEEEEEEEEETTEEEEEEEEEEECTTCCCCSSEEEEEEEEEECTTCC T ss_pred CCceEEeCccccCCCCEEEEEEeCCCCCCCccceEEeecCCCCCCCcEEEEEEEECCCCCcCCCCceEEEEEEecCCCCC Confidence 455777776 456788888744332111 1111111121 44455555552 22333466665422 1 Q ss_pred -C----eEEEEEEEcccccCceeEEEEEEecC--CC-cceeEeee--cccCCCccceEEEEEEe-----CCeeEEEEccc Q FBpp0290335 113 -T----VVQLGVHLSPVVKNSYNVSLVYTQAD--QN-IGRKLASF--GVAHVPDKWNSIALQVL-----SDKVSFYYDCE 177 (971) Q Consensus 113 -~----~~qlgl~lsg~~~~~~~i~L~Y~~~~--~~-~~~~~~sF--~v~l~dg~WHrlaLsV~-----g~~VtLyvDC~ 177 (971) + ..-|+|.+.+.. +.+.+.... .. -.+....| ..++.-|+||+|.|.|. ...+.||+|-+ T Consensus 101 ~~~~~~~P~~~l~v~g~~-----l~~r~~~g~~~~~~~~~~~~~~~~~~~~~~G~W~~~vi~v~ws~d~~G~~~vw~nG~ 175 (238) T 2zzj_A 101 CGGDDWMPSTMIWIQNNQ-----LYSRYVNGHYRQPNCGRNIVTRPNLATVSAGAWHRVVLQIKWASDNTGYFKIWFDGA 175 (238) T ss_dssp CSSSSEEEEEEEEEETTE-----EEEEEEEECCBTTBCCEEEEEEEEEEECCTTSCEEEEEEEEECSSTTEEEEEEETTE T ss_pred CCccCCCCceeEEEECCE-----EEEEEecCCccCccccCceeeecccCccCCCCeEEEEEEEEecCCCCEEEEEEECCE Confidence 1 677888876652 344443211 11 11233333 23456899999999997 46799999998 Q ss_pred cccee Q FBpp0290335 178 LRNTT 182 (971) Q Consensus 178 ~~~t~ 182 (971) ++... T Consensus 176 ~v~~~ 180 (238) T 2zzj_A 176 KVHEE 180 (238) T ss_dssp EEEEE T ss_pred EEEEE Confidence 86543No 60>3zyp_A CIP1; metal binding protein, calcium-binding, CBM-containing, beta sandwich jelly roll, carbohydrate-binding; HET: NAG; 1.50A {Hypocrea jecorina} Probab=61.83 E-value=71 Score=33.71 Aligned_cols=89 Identities=6% Similarity=0.038 Sum_probs=57.4 Q ss_pred ceEEEEEEeecCC---CCceEEEEEeCCCCeEEEEEEEcccccCceeEEEEEEecC--CC---cceeEeeecccCCCccc Q FBpp0290335 87 EFAILITFRQSSL---KGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQAD--QN---IGRKLASFGVAHVPDKW 158 (971) Q Consensus 87 eFSilaT~R~~~~---~~g~LfsV~~~~~~~~qlgl~lsg~~~~~~~i~L~Y~~~~--~~---~~~~~~sF~v~l~dg~W 158 (971) +|++=+.||..+. +...||++.+..+... .|++.+.. . .|.|.... .. ++..-+.-.+.+..++| T Consensus 66 ~~y~R~~v~~~~~~~~~h~t~~~~~~~~~~~~--~lRiGgq~--~---~l~~n~~sddat~p~~sp~G~a~s~~l~~~~W 138 (218) T 3zyp_A 66 DVYVRAWIRLQTALGSNHVTFIIMPDTAQGGK--HLRIGGQS--Q---VLDYNRESDDATLPDLSPNGIASTVTLPTGAF 138 (218) T ss_dssp SEEEEEEEEESSCCCSSCEEEEEEEBGGGTTC--EEEEEEET--T---EEEEEETTTCCEESCSSHHHHHHSCCCCCSSC T ss_pred ceEEEEEEEeccCCCCCcEEEEEeecCCCCCc--cEEEcccc--c---eeeeeeccCcccccccCCCcccccccccCCcE Confidence 7888888888543 3447999887655333 46666652 2 24444432 11 11111111467889999 Q ss_pred eEEEEEEeC-CeeEEEEccccccee Q FBpp0290335 159 NSIALQVLS-DKVSFYYDCELRNTT 182 (971) Q Consensus 159 HrlaLsV~g-~~VtLyvDC~~~~t~ 182 (971) |-|.++|.. ..++++||-+++... T Consensus 139 ~C~E~~v~~~g~~~~WldG~~v~~l 163 (218) T 3zyp_A 139 QCFEYHLGTDGTIETWLNGSLIPGM 163 (218) T ss_dssp EEEEEEECSSSCEEEEETTEECGGG T ss_pred EEEEEEECCCCeEEEEECCEEeeeE Confidence 999999975 579999999998765No 61>3w9a_A CCGH131A, putative uncharacterized protein; beta-jelly roll, hydrolase; 1.99A {Coprinopsis cinerea} Probab=59.83 E-value=55 Score=35.16 Aligned_cols=75 Identities=8% Similarity=0.124 Sum_probs=48.6 Q ss_pred ceEEEEEEeecC-----CCCceEEEEEeCCCCeEEEEEEEcccccCceeEEEEEEecCCCcceeEeeecccCCCccceEE Q FBpp0290335 87 EFAILITFRQSS-----LKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLASFGVAHVPDKWNSI 161 (971) Q Consensus 87 eFSilaT~R~~~-----~~~g~LfsV~~~~~~~~qlgl~lsg~~~~~~~i~L~Y~~~~~~~~~~~~sF~v~l~dg~WHrl 161 (971) --++.+.||... .+..|++..... + +++|++... .+. -.|++.... + ..|.+++.++.||+| T Consensus 93 ~~~~HfSv~~d~~~pln~sheyq~~f~ES--h--~felk~G~~-~~~--~~l~~~~~~-----~-~~wstpf~~~~W~NF 159 (245) T 3w9a_A 93 NLFYHFSIKRTNTNAPDPTLEHQVMFFES--H--FTELKYGVG-SNP--SNLGWYAGG-----T-ERWSTPFTADTWFNF 159 (245) T ss_dssp EEEEEEEEECCSTTCCCTTSCEEEEEETT--C--SEEEEESCS-SCT--TEEEEEETT-----E-EEEEEECCTTCCEEE T ss_pred eEEEEEEEEeccccCCcCccceeeecccc--c--eEEEEeCCC-CCC--CcEEEecCC-----c-eEEEeeecCCcEEEE Confidence 455566666632 344666655552 3 788888733 222 246676643 1 567889999999999 Q ss_pred EEEEeC--CeeEEEE Q FBpp0290335 162 ALQVLS--DKVSFYY 174 (971) Q Consensus 162 aLsV~g--~~VtLyv 174 (971) ++.|.= +.|.+|. T Consensus 160 Ai~iDf~~nt~~vy~ 174 (245) T 3w9a_A 160 AYDIDFTAKTVGLWA 174 (245) T ss_dssp EEEEETTTTEEEEEE T ss_pred EEEeecCCCEEEEEE Confidence 998754 6788887No 62>4le3_A Beta-glucanase; GH131, hydrolase; 1.80A {Podospora anserina} PDB: 4le4_A* Probab=59.57 E-value=52 Score=35.47 Aligned_cols=76 Identities=9% Similarity=0.156 Sum_probs=48.4 Q ss_pred ceEEEEEEeecC-----CCCceEEEEEeCCCCeEEEEEEEc----ccccCceeEEEEEEecCCCcceeEeeecccCCCcc Q FBpp0290335 87 EFAILITFRQSS-----LKGGYLFSVVNPLDTVVQLGVHLS----PVVKNSYNVSLVYTQADQNIGRKLASFGVAHVPDK 157 (971) Q Consensus 87 eFSilaT~R~~~-----~~~g~LfsV~~~~~~~~qlgl~ls----g~~~~~~~i~L~Y~~~~~~~~~~~~sF~v~l~dg~ 157 (971) --++.+.||... .+..|++....+ .+++|++. ....+. -.|++.... ...|.+++.++. T Consensus 94 ~~~~HfSv~~d~~~pln~shEyqi~F~ES----h~~elk~G~~~g~~~~~~--~~l~~~~~~------~~~wstp~~~~~ 161 (252) T 4le3_A 94 KVYYHFSLMRKDINAPATTREHQIAFFES----HFTELKSGWLSGAPGISD--TLLRWCVGG------QTQWSVEWAADV 161 (252) T ss_dssp EEEEEEEEECCSTTCCCTTSCEEEEEETT----CSEEEEESCCSSSCCGGG--GEEEEEETT------EEEEEEECCTTC T ss_pred eEEEEEEEEeCcCcCCCCCcceeEEeecc----cEEEEEeccccCCCCCCC--CeEEEecCC------ceEEEeeeccCc Confidence 345555566532 245677766663 37888876 111111 245555542 245688999999 Q ss_pred ceEEEEEEe--CCeeEEEE Q FBpp0290335 158 WNSIALQVL--SDKVSFYY 174 (971) Q Consensus 158 WHrlaLsV~--g~~VtLyv 174 (971) ||+||+.|. .+.|.+|. T Consensus 162 W~NFA~~iDf~~nt~~v~~ 180 (252) T 4le3_A 162 WHNVAYEIDFAAGTVGFWH 180 (252) T ss_dssp CEEEEEEEETTTTEEEEEE T ss_pred EEEEEEEeeecCCEEEEEE Confidence 999999988 78888887No 63>2dpr_A Conantokin-T, CON-T; conantoxin, nmdar antagonist, GLA-containing, metal B protein; HET: CGU; 1.70A {Conus tulipa} PDB: 1ont_A* Probab=57.50 E-value=5.5 Score=25.54 Aligned_cols=12 Identities=50% Similarity=0.717 Sum_probs=10.7 Q ss_pred hHHHHHHHHhhh Q FBpp0290335 959 ADEYAAHLENLL 970 (971) Q Consensus 959 ~~~~~~~~~~~~ 970 (971) |+||++.||+|. T Consensus 2 eeeyqemlenlr 13 (21) T 2dpr_A 2 EEEYQEMLENLR 13 (26) T ss_dssp CHHHHHHHHHHH T ss_pred cHHHHHHHHHHH Confidence 689999999985No 64>1buu_A Protein (mannose-binding protein A); lectin, HOST defense, metalloprotein, sugar binding protein; 1.90A {Rattus norvegicus} SCOP: d.169.1.1 h.1.1.1 Probab=44.42 E-value=5.7 Score=39.36 Aligned_cols=12 Identities=25% Similarity=0.656 Sum_probs=10.0 Q ss_pred ccccCCCceEEE Q FBpp0290335 916 RQSCDSKLIILC 927 (971) Q Consensus 916 ~~~C~~~~~~lC 927 (971) ..+|+.++..+| T Consensus 153 d~~C~~~~~~IC 164 (168) T 1buu_A 153 DISCQASHTAVC 164 (168) T ss_dssp EECTTSCEEEEE T ss_pred CcCCCCCeeEEE Confidence 368999998888No 65>3imm_A Putative secreted glycosylhydrolase; YP_001301887.1, putative glycosyl hydrolase; HET: MSE; 2.00A {Parabacteroides distasonis atcc 8503} Probab=41.17 E-value=30 Score=35.65 Aligned_cols=97 Identities=11% Similarity=0.207 Sum_probs=51.4 Q ss_pred CCceEEEEEEeec-CCCCceEEEEEeCCCC-eEEEEEEEcccccCcee-EEEEEEecCCCcceeEe-eecccCCCccceE Q FBpp0290335 85 LYEFAILITFRQS-SLKGGYLFSVVNPLDT-VVQLGVHLSPVVKNSYN-VSLVYTQADQNIGRKLA-SFGVAHVPDKWNS 160 (971) Q Consensus 85 l~eFSilaT~R~~-~~~~g~LfsV~~~~~~-~~qlgl~lsg~~~~~~~-i~L~Y~~~~~~~~~~~~-sF~v~l~dg~WHr 160 (971) |-+|.|.+-+|.. ..+++++|.+....+. ..-++++|.....+... +. .+...++.-..... .-......++|++ T Consensus 46 y~df~L~~e~k~~~~~NSGi~~r~~~~~~~~~~G~E~Qi~d~~~~~~~~~~-~~~~~G~ly~~~~~~~~~~~kp~geWn~ 124 (201) T 3imm_A 46 YENFELDLDFKTDVGTNSGVVVYCTDTKDWIPNSVEIQIADDHCEKWGNGK-PYEKCGAIYGHLGAVQDKVVKKPGEWNH 124 (201) T ss_dssp BCSEEEEEEEEECTTCEEEEEEEESCSSSCTTSSEEEEEECTTCCTTTTCC-GGGSTTSBTTTBCCSSSCCSCCTTSEEE T ss_pred ccCEEEEEEEEeCCCCCCEEEEEeccCCCCcCceEEEEEECCCCCcccccC-CccccceeecccCcccccccCCCCccEE Confidence 3499999999985 4567888877653110 00123444221100000 00 00000100000000 0011123689999 Q ss_pred EEEEEeCCeeEEEEccccccee Q FBpp0290335 161 IALQVLSDKVSFYYDCELRNTT 182 (971) Q Consensus 161 laLsV~g~~VtLyvDC~~~~t~ 182 (971) +.|.|.+++|+.|||-+++... T Consensus 125 ~~I~~~g~~i~v~lNG~~v~~~ 146 (201) T 3imm_A 125 MRIKCAGQHIMVILNGKKVTEM 146 (201) T ss_dssp EEEEEETTEEEEEETTEEEEEE T ss_pred EEEEEECCEEEEEECCEEEEEE Confidence 9999999999999999888664No 66>1o91_A Collagen alpha 1(VIII) chain; C1Q_LIKE_domain, extracellular matrix, adhesion, connective tissue, repeat, structural protein; HET: CPS; 1.9A {Mus musculus} SCOP: b.22.1.1 Probab=38.65 E-value=7.9 Score=39.44 Aligned_cols=55 Identities=25% Similarity=0.349 Sum_probs=25.1 Q ss_pred CcEEecCccccccCCCCcccCCCc-eeecCCCccCCCCCCCcceEEecCCCCcccccCcccC Q FBpp0290335 830 GDVLFNSWKGIFNGQGGFFSQAPR-IYSFSGKNVMTDSTWPMKMVWHGSLPNGERSMDTYCD 890 (971) Q Consensus 830 g~vl~~~~~~l~~~~~~~~~~~~~-i~~f~~~~~l~~~~~~~k~vW~Gs~~~g~~~~~~~C~ 890 (971) +.|+.+.-...-. ..++|+...+ +|.|+=+-.. ..+.+|..+..++......+|+ T Consensus 70 d~v~~N~G~~yn~-~TG~FTapv~G~Y~Fs~~~~~-----~~~~~~v~L~~Ng~~~~~~~~~ 125 (178) T 1o91_A 70 DKLLYNGRQNYNP-QTGIFTCEVPGVYYFAYHVHC-----KGGNVWVALFKNNEPMMYTYDE 125 (178) T ss_dssp CEEEEEETTCEET-TTTEEECCSCEEEEEEEEEEE-----EEEEEEEEEEETTEEEEEEEEC T ss_pred CEEEEcCCCCccC-CCCeEEeeCCeEEEEEEEEEe-----CCceEEEEEEECCEEEEEEEec Confidence 4455543333332 3335555555 6655322111 1245566666666554444443No 67>3s5q_A Putative glycosylhydrolase; concanavalin A-like lectins/glucanases, structural genomics, center for structural genomics, JCSG; 1.85A {Parabacteroides distasonis} Probab=35.36 E-value=1.2e+02 Score=31.70 Aligned_cols=96 Identities=10% Similarity=0.187 Sum_probs=51.5 Q ss_pred CCceEEEEEEeec-CCCCceEEEEEeCCCC-eEEEEEEEcccccCceeEEEEEE--ecCCCcceeEe-eecccCCCccce Q FBpp0290335 85 LYEFAILITFRQS-SLKGGYLFSVVNPLDT-VVQLGVHLSPVVKNSYNVSLVYT--QADQNIGRKLA-SFGVAHVPDKWN 159 (971) Q Consensus 85 l~eFSilaT~R~~-~~~~g~LfsV~~~~~~-~~qlgl~lsg~~~~~~~i~L~Y~--~~~~~~~~~~~-sF~v~l~dg~WH 159 (971) |-+|.|.+-+|.. ..++|++|.+....+. ..-++++|.....+... -.+. ..++.-....+ .-......++|+ T Consensus 59 f~dF~L~~e~k~~~~~NSGI~~r~~~~~~~~~~G~E~QIld~~~~~~~--~~~~~~~~GslY~~~~~~~~~~~kp~geWn 136 (214) T 3s5q_A 59 YENFILDLEFKTDVNTNSGVVIYCTDKGNWIPSSIEIQIADDHHPEWQ--SYPEYWRCGSIYGHKGANEQLVVKKPGEWN 136 (214) T ss_dssp BCSEEEEEEEEECTTCEEEEEEEESCSTTCGGGSEEEEEECTTSGGGG--GSCGGGSTTSBTTTBCCSSSCCSCCTTSEE T ss_pred eccEEEEEEEEECCCCccEEEEEecCCCCCcceEEEEEEECCCCCccc--ccCCCCceeeeccccCcccccccCCCCceE Confidence 3499999999985 4677888877653110 00123443221100000 0000 00100000000 001112368999 Q ss_pred EEEEEEeCCeeEEEEccccccee Q FBpp0290335 160 SIALQVLSDKVSFYYDCELRNTT 182 (971) Q Consensus 160 rlaLsV~g~~VtLyvDC~~~~t~ 182 (971) ++.|.|.+++|+.|||-+++... T Consensus 137 ~~~I~~~g~~i~v~lNG~~v~~~ 159 (214) T 3s5q_A 137 RMIITAKGQQIDIELNGKHIVSA 159 (214) T ss_dssp EEEEEEETTEEEEEETTEEEEEE T ss_pred EEEEEEECCEEEEEECCEEEEEE Confidence 99999999999999999888654No 68>1buu_A Protein (mannose-binding protein A); lectin, HOST defense, metalloprotein, sugar binding protein; 1.90A {Rattus norvegicus} SCOP: d.169.1.1 h.1.1.1 Probab=33.16 E-value=11 Score=37.28 Aligned_cols=6 Identities=17% Similarity=0.373 Sum_probs=2.9 Q ss_pred chhhhH Q FBpp0290335 784 ADFACY 789 (971) Q Consensus 784 aD~~C~ 789 (971) |..+|+ T Consensus 71 A~~~C~ 76 (168) T 1buu_A 71 VKALCS 76 (168) T ss_dssp HHHHHH T ss_pred HHHHHH Confidence 444554No 69>1dyp_A Kappa-carrageenase; hydrolase, kappa-carrageenan double helix degradation; HET: MSE; 1.54A {Pseudoalteromonas carrageenovora} SCOP: b.29.1.2 Probab=30.85 E-value=1.1e+02 Score=32.86 Aligned_cols=30 Identities=20% Similarity=0.413 Sum_probs=26.5 Q ss_pred CCccceEEEEEEeCCeeEEEEcccccceee Q FBpp0290335 154 VPDKWNSIALQVLSDKVSFYYDCELRNTTL 183 (971) Q Consensus 154 ~dg~WHrlaLsV~g~~VtLyvDC~~~~t~~ 183 (971) +...||..+|....++|++|||-+++.+.. T Consensus 188 ~~~~fH~Y~veW~~~~I~~yvDG~~~~~~~ 217 (271) T 1dyp_A 188 PRNDFHTYGVNVTKDKITWYVDGEIVGEKD 217 (271) T ss_dssp TTSSCEEEEEEECSSEEEEEETTEEEEEEE T ss_pred CCCCeEEEEEEEECCEEEEEECCEEEeeec Confidence 457999999999999999999999887653No 70>3hbk_A Putative glycosyl hydrolase; YP_001302580.1, WAS domain of U function (DUF1080), structural genomics; HET: MSE; 2.36A {Parabacteroides distasonis atcc 8503} Probab=25.84 E-value=1.7e+02 Score=30.96 Aligned_cols=28 Identities=14% Similarity=0.278 Sum_probs=25.5 Q ss_pred CccceEEEEEE-eCCeeEEEEccccccee Q FBpp0290335 155 PDKWNSIALQV-LSDKVSFYYDCELRNTT 182 (971) Q Consensus 155 dg~WHrlaLsV-~g~~VtLyvDC~~~~t~ 182 (971) .++|+++.|.| .+++|+.+||-+++... T Consensus 162 ~geWN~~~I~~~~g~~i~v~lNG~~V~~~ 190 (245) T 3hbk_A 162 VGEWNTAVVKVFPNNHVEHWLNGVKVLEY 190 (245) T ss_dssp TTSEEEEEEEECTTCEEEEEETTEEEEEE T ss_pred CCccEEEEEEEEcCCEEEEEECCEEEEEe Confidence 58999999999 89999999999987665No 71>3h3l_A Putative sugar hydrolase; YP_001304206.1, structural genomic center for structural genomics, JCSG; HET: MSE; 1.59A {Parabacteroides distasonis atcc 8503} Probab=23.09 E-value=63 Score=34.42 Aligned_cols=98 Identities=12% Similarity=0.049 Sum_probs=52.2 Q ss_pred CCceEEEEEEeec-CCCCceEEEEEeCCCCe---EEEEEEEcccccCceeEEE---EEEecCCCcceeEeeecccCCCcc Q FBpp0290335 85 LYEFAILITFRQS-SLKGGYLFSVVNPLDTV---VQLGVHLSPVVKNSYNVSL---VYTQADQNIGRKLASFGVAHVPDK 157 (971) Q Consensus 85 l~eFSilaT~R~~-~~~~g~LfsV~~~~~~~---~qlgl~lsg~~~~~~~i~L---~Y~~~~~~~~~~~~sF~v~l~dg~ 157 (971) |-+|.|.+-+|.. ..|++++|.+......- .-++++|........ ..+ -....++.-....+......-.++ T Consensus 76 y~dF~L~~E~k~~~~~NSGI~~r~~~~~g~~~~~~g~E~QIlD~~~~~~-~~~g~~~~~~~GslY~~~~~~~~~~~p~ge 154 (241) T 3h3l_A 76 FKNFVFEIEWKIDKAGNSGIFYTAQEIEGTPIYYSSPEYQLLDNENMPD-AWEGCDGNRQAGAVYDMIMPDPQPVKPYGN 154 (241) T ss_dssp BSSEEEEEEEEECBTCEEEEEEEECCCTTSCGGGSSCEEEEECTTTCGG-GSSSSTTTTSTTSBTTTBCCSSCCCCCTTS T ss_pred cccEEEEEEEEeCCCCCcEEEEEecCCCCCccccceEEEEEeCCCCCCc-cccccCCCCcccccccccCccccccCCCCc Confidence 3499999999985 56678888776532110 112444421100000 000 000000000000011112233689 Q ss_pred ceEEEEEEeCCeeEEEEcccccceee Q FBpp0290335 158 WNSIALQVLSDKVSFYYDCELRNTTL 183 (971) Q Consensus 158 WHrlaLsV~g~~VtLyvDC~~~~t~~ 183 (971) |+++-|.|.+++|+.+||-.++.... T Consensus 155 WN~~~I~~~g~~i~v~lNG~~V~~~~ 180 (241) T 3h3l_A 155 WNKTRIVVYNQRVIHYMNDVKILEFQ 180 (241) T ss_dssp CEEEEEEEETTEEEEEETTEEEEEEE T ss_pred eEEEEEEEECCEEEEEECCEEEEEEe Confidence 99999999999999999999886643No 72>3osd_A Putative glycosyl hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE; 1.80A {Bacteroides thetaiotaomicron} PDB: 3nmb_A 4hxc_A* Probab=22.76 E-value=94 Score=33.57 Aligned_cols=28 Identities=18% Similarity=0.110 Sum_probs=25.5 Q ss_pred CccceEEEEEEeCCeeEEEEccccccee Q FBpp0290335 155 PDKWNSIALQVLSDKVSFYYDCELRNTT 182 (971) Q Consensus 155 dg~WHrlaLsV~g~~VtLyvDC~~~~t~ 182 (971) .++|+++-|.|.+++|+.+||-.++... T Consensus 178 ~geWN~~~I~v~g~~i~v~lNG~~V~~~ 205 (265) T 3osd_A 178 FGEWNKAKIMVYKGTVVHGQNDENVLEY 205 (265) T ss_dssp TTSCEEEEEEEETTEEEEEETTEEEEEE T ss_pred CCccEEEEEEEECCEEEEEECCEEEEEE Confidence 6899999999999999999999887654No 73>1axk_A Gluxyn-1; bifunctional, fusion protein, 1,4-beta-xylanase, 1,3-1,4-beta-glucanase, hybrid enzyme; 2.10A {Bacillus subtilis} SCOP: b.29.1.2 b.29.1.11 Probab=21.90 E-value=1e+03 Score=27.12 Aligned_cols=68 Identities=13% Similarity=0.224 Sum_probs=43.2 Q ss_pred CCccceEEEEEEeCCeeEEEEcccccceee--eccCCcccccCCCceEEEecc------CCccCcccceeeeeeEEecCC Q FBpp0290335 154 VPDKWNSIALQVLSDKVSFYYDCELRNTTL--VTREPIELVFDSASTLYIGQA------GSIIGGKFEGYLEKINVYGNP 225 (971) Q Consensus 154 ~dg~WHrlaLsV~g~~VtLyvDC~~~~t~~--l~r~p~~l~~~~~~~l~IGq~------g~~~~~~F~G~LQ~L~I~~dp 225 (971) +...||..+|.-..+.|++|||-+++.+.. ++..+..|. ..|+++.. .......+...|.-+||+... T Consensus 82 ~~~~FHtY~veWtp~~I~wyVDG~~v~t~~~~~P~~P~~li----LNlwvGgg~g~W~G~p~~~~P~~m~VDyVRVYq~~ 157 (394) T 1axk_A 82 ASKGFHTYAFDWQPGYIKWYVDGVLKHTATANIPSTPGKIM----MNLWNGTGVDDWLGSYNGANPLYAEYDWVKYTSNA 157 (394) T ss_dssp GGGSCEEEEEEEETTEEEEEETTEEEEEECSSCCCSCBEEE----EEEEEBSSCHHHHCCCCCCCCEEEEEEEEEEEECC T ss_pred CCCCeEEEEEEEECCEEEEEECCEEEEEECCCCCCCCeEEE----EEEEccCCccccCCCCCCCCCeEEEEEEEEeeccC Confidence 357899999999999999999998876652 222222222 23455520 011122456688889988643No 74>3h0o_A Beta-glucanase; 1,3-1,4-beta-D-glucanase, CH-PI stacking interactions, TRIS inhibition, hydrolase, glycosidase; 1.40A {Fibrobacter succinogenes} SCOP: b.29.1.2 PDB: 1mve_A 1zm1_A* 3hr9_A 2r49_A 3axd_A 3axe_A* Probab=21.54 E-value=6.8e+02 Score=26.27 Aligned_cols=29 Identities=14% Similarity=0.170 Sum_probs=26.0 Q ss_pred CCccceEEEEEEeCCeeEEEEccccccee Q FBpp0290335 154 VPDKWNSIALQVLSDKVSFYYDCELRNTT 182 (971) Q Consensus 154 ~dg~WHrlaLsV~g~~VtLyvDC~~~~t~ 182 (971) +...||..+|.-..++|++|||-+++.+. T Consensus 91 ~~~~fH~Y~ieW~~~~I~wyVDg~~~~t~ 119 (240) T 3h0o_A 91 ADQAFHTYGLEWTPNYVRWTVDGQEVRKT 119 (240) T ss_dssp TTTSCEEEEEEECSSCEEEEETTEEEEEE T ss_pred CCCCcEEEEEEEECCEEEEEECCEEEEEE Confidence 45799999999999999999999988665No 75>3wvj_A Beta-glucanase; thermostability, industrial enzyme, pastoris, A classic beta-jellyroll fold, hydrolase; HET: B3P; 1.95A {Clostridium thermocellum} Probab=21.36 E-value=7.5e+02 Score=25.28 Aligned_cols=29 Identities=14% Similarity=0.281 Sum_probs=25.9 Q ss_pred CCccceEEEEEEeCCeeEEEEccccccee Q FBpp0290335 154 VPDKWNSIALQVLSDKVSFYYDCELRNTT 182 (971) Q Consensus 154 ~dg~WHrlaLsV~g~~VtLyvDC~~~~t~ 182 (971) ....||..+|....++|++|||-+++.+. T Consensus 142 ~~~~fH~Y~~~W~~~~i~~yvDg~~~~~~ 170 (220) T 3wvj_A 142 ASQDFHTYGFEWRPDYIDFYVDGKKVYRG 170 (220) T ss_dssp TTTSCEEEEEEEETTEEEEEETTEEEEEE T ss_pred CCCCcEEEEEEEECCEEEEEECCEEEEEE Confidence 35799999999999999999999987665No 76>4jqt_A Putative glycosyl hydrolase; PF06439 family protein, DUF1080, structural genomics, joint for structural genomics, JCSG; HET: MSE; 2.49A {Bacteroides thetaiotaomicron} Probab=21.23 E-value=3.1e+02 Score=31.49 Aligned_cols=93 Identities=15% Similarity=0.289 Sum_probs=53.4 Q ss_pred CCceEEEEEEeec-CCCCceEEEEEeCCC----CeEEEEEEEcccccCceeEEEEEEecCCCcceeEeee------cccC Q FBpp0290335 85 LYEFAILITFRQS-SLKGGYLFSVVNPLD----TVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLASF------GVAH 153 (971) Q Consensus 85 l~eFSilaT~R~~-~~~~g~LfsV~~~~~----~~~qlgl~lsg~~~~~~~i~L~Y~~~~~~~~~~~~sF------~v~l 153 (971) |-+|.|.+-+|.. ..+++++|....... ...-+++++...... . ---+|...... .+..+ ...+ T Consensus 51 y~dF~L~~e~k~~~~~NSGI~~r~~~~~~~~~~~~~gyqvqi~~~~~~-~-~g~ly~~~~~g---~l~~~~~~p~~~~~~ 125 (431) T 4jqt_A 51 YGDFILEFDFKIDDGLNSGVQLRSESKKDYQNGRVHGYQFEIDPSKRA-W-SGGIYDEARRN---WLYPLTLNPAAKTAF 125 (431) T ss_dssp BSSEEEEEEEEECTTCCEEEEEEEBCCTTTGGGCCBEEEEEECCSTTC-C-TTCEEEETTTE---EEECGGGSGGGGGCC T ss_pred cccEEEEEEEEeCCCCceEEEEEecCcccccCCceeEEEEEEcCCCCC-C-cCcccCcCccc---eecccccCchhhccc Confidence 3499999999986 467888887764211 011234444332110 0 00123222100 01100 1123 Q ss_pred CCccceEEEEEEeCCeeEEEEccccccee Q FBpp0290335 154 VPDKWNSIALQVLSDKVSFYYDCELRNTT 182 (971) Q Consensus 154 ~dg~WHrlaLsV~g~~VtLyvDC~~~~t~ 182 (971) -.++|+++.|.|.+++|+.|||-+++... T Consensus 126 ~~geWn~~~I~~~g~~i~v~lNG~~v~~~ 154 (431) T 4jqt_A 126 KNNAWNKARIEAIGNSIRTWINGVPCANI 154 (431) T ss_dssp CTTSCEEEEEEEETTEEEEEETTEEEEEE T ss_pred CCCCcEEEEEEEECCEEEEEECCEEEEEE Confidence 37899999999999999999999876543