Query FBpp0290336 type=protein; loc=3L:join(7012190..7012289,7012739..7013277,7033869..7033964,7034503..7034538,7034635..7034703,7034972..7035038,7035170..7035315,7035744..7035881,7038005..7038151,7041018..7041131,7043466..7043720,7044926..7045003,7045109..7045355,7046334..7046488,7046586..7046678,7048842..7048964,7049550..7049576,7050565..7050695,7051242..7051421,7051486..7051722,7051977..7052052); ID=FBpp0290336; name=Mp-PM; parent=FBgn0260660,FBtr0301114; dbxref=REFSEQ:NP_001163364,GB_protein:ACZ94635,FlyBase:FBpp0290336,FlyBase_Annotation_IDs:CG42543-PM,FlyMine:FBpp0290336,modMine:FBpp0290336; MD5=5029279297a892ed6f7b6c926fd7067e; length=1017; release=r6.06; species=Dmel; Match_columns 1017 No_of_seqs 776 out of 2730 Neff 6.3 Searched_HMMs 35384 No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 1dy2_A Collagen alpha1(XV) cha 100.0 1.3E-62 3.7E-67 491.0 13.2 171 807-981 6-177 (180) 2 1koe_A Endostatin; angiogenesi 100.0 5.5E-62 1.5E-66 491.6 12.5 169 809-977 2-171 (172) 3 2uur_A Collagen alpha-1(IX) ch 100.0 2E-34 5.6E-39 312.0 18.5 194 35-238 30-235 (245) 4 2erf_A Thrombospondin-1; TSP-1 100.0 1.2E-32 3.4E-37 291.2 15.8 194 34-234 2-209 (209) 5 3hqv_A Collagen alpha-1(I) cha 100.0 3.9E-29 1.1E-33 314.4 40.7 31 654-684 998-1028(1056) 6 1za4_A Thrombospondin 1; TSP-1 100.0 2.4E-31 6.9E-36 288.7 16.7 195 34-237 12-222 (251) 7 3hqv_B Collagen alpha-2(I) cha 100.0 7.3E-29 2.1E-33 311.3 39.9 9 675-683 1014-1022(1028) 8 3hsh_A Endostatin, collagen al 99.5 2.8E-15 7.8E-20 123.8 4.8 53 716-768 3-55 (56) 9 3n3f_A Collagen alpha-1(XV) ch 99.5 4.4E-15 1.2E-19 121.9 5.4 52 717-768 2-53 (54) 10 3sh4_A LG3 peptide; actin disa 98.9 2.2E-08 6.4E-13 103.5 15.7 151 62-224 5-168 (195) 11 3v64_A Low-density lipoprotein 98.9 4.4E-08 1.3E-12 100.9 16.5 151 63-224 3-171 (191) 12 3pve_A Agrin, AGRN protein; mR 98.8 1.4E-07 3.8E-12 97.3 16.7 151 63-224 10-170 (189) 13 4pbp_A C-reactive protein; acu 98.8 8E-08 2.3E-12 100.1 15.1 158 54-228 2-172 (210) 14 1pz7_A Agrin; structural prote 98.8 9.8E-08 2.8E-12 99.7 15.5 126 87-223 49-183 (204) 15 3flp_A SAP-like pentraxin; phy 98.7 3.3E-07 9.4E-12 95.8 16.5 160 62-230 6-177 (217) 16 2h0b_A Neurexin-1-alpha; B-san 98.6 4E-07 1.1E-11 93.3 15.2 127 87-225 29-163 (184) 17 4avs_A Serum amyloid P-compone 98.6 6.2E-07 1.8E-11 93.1 15.6 150 62-228 6-166 (204) 18 2r16_A Neurexin-1-alpha; beta- 98.6 6E-07 1.7E-11 92.1 15.2 125 87-224 28-157 (182) 19 3bod_A Neurexin-1-alpha; neure 98.6 9.1E-07 2.6E-11 90.7 15.8 125 87-224 30-156 (178) 20 3pvn_A C-reactive protein; pen 98.6 8.5E-07 2.4E-11 92.1 15.3 150 62-228 6-168 (206) 21 4c1w_A Neuraminidase; sugar bi 98.4 4.2E-06 1.2E-10 86.0 14.6 136 87-228 34-181 (188) 22 3asi_A Neurexin-1-alpha; beta- 98.4 3.8E-06 1.1E-10 97.1 15.3 127 87-225 250-377 (410) 23 2v73_A CBM40, putative EXO-alp 98.4 1.3E-05 3.6E-10 83.4 17.4 135 86-228 40-180 (191) 24 1d2s_A SHBG, sex hormone-bindi 98.3 8.8E-06 2.5E-10 82.7 15.1 123 87-225 27-157 (170) 25 1f5f_A SHBG, sex hormone-bindi 98.2 2.3E-05 6.5E-10 82.1 15.8 128 87-225 39-175 (205) 26 2r1d_A Neurexin-1-beta, neurex 98.2 1.8E-05 4.9E-10 84.6 15.0 125 87-224 64-190 (226) 27 2jd4_A Laminin subunit alpha-1 98.2 1.9E-05 5.5E-10 90.2 15.9 125 87-224 221-356 (383) 28 1dyk_A Laminin alpha 2 chain; 98.1 3.9E-05 1.1E-09 88.1 15.5 126 87-225 233-369 (394) 29 4qvs_A S-layer domain-containi 98.1 6.3E-06 1.8E-10 86.4 8.2 164 53-228 38-213 (227) 30 2r1b_A Neurexin-1-beta, neurex 98.0 5.5E-05 1.6E-09 80.2 14.5 127 87-224 36-192 (220) 31 1h30_A GAS6, growth-arrest-spe 97.8 0.00036 1E-08 81.0 16.6 127 87-223 62-196 (422) 32 2jd4_A Laminin subunit alpha-1 97.7 0.00061 1.7E-08 77.8 17.0 125 87-223 44-176 (383) 33 1a8d_A Tetanus neurotoxin; clo 97.7 0.0016 4.6E-08 76.3 19.5 165 51-228 47-235 (452) 34 4dqa_A Uncharacterized protein 97.5 0.0013 3.7E-08 74.8 16.1 150 62-228 140-295 (355) 35 1dyk_A Laminin alpha 2 chain; 97.5 0.0013 3.6E-08 75.6 15.9 126 87-225 58-191 (394) 36 2jkb_A Sialidase B; intramolec 97.4 0.0012 3.3E-08 81.7 15.3 164 62-233 34-211 (686) 37 2vu9_A Botulinum neurotoxin A 97.4 0.0034 9.7E-08 71.7 17.3 168 50-231 48-231 (444) 38 2wjs_A Laminin subunit alpha-2 97.4 0.0011 3.1E-08 80.6 14.3 124 87-223 408-540 (608) 39 1h30_A GAS6, growth-arrest-spe 97.4 0.00089 2.5E-08 77.7 12.5 127 87-221 250-392 (422) 40 3asi_A Neurexin-1-alpha; beta- 97.4 0.0018 5.2E-08 74.7 14.9 123 87-224 27-162 (410) 41 3vuo_A NTNHA; protection of bo 97.2 0.0057 1.6E-07 77.0 17.2 155 51-228 864-1025(1196) 42 3v0a_B NTNH; botulinum neuroto 97.1 0.0079 2.2E-07 75.6 16.4 155 51-228 867-1028(1196) 43 2wjs_A Laminin subunit alpha-2 97.1 0.0068 1.9E-07 73.8 15.9 126 87-222 226-363 (608) 44 3pme_A Type C neurotoxin; stru 97.1 0.0077 2.2E-07 68.7 14.9 167 51-231 31-210 (420) 45 3rsj_A BONT/F; clostridium bot 97.0 0.034 9.7E-07 63.0 19.6 165 50-231 29-212 (413) 46 3n7l_A Neurotoxin; HCR/D-SA, g 97.0 0.0026 7.4E-08 73.8 11.1 163 51-230 32-219 (424) 47 3qcw_A Neurexin-1-alpha; synap 96.9 0.0081 2.3E-07 79.3 15.8 122 89-222 1084-1206(1245) 48 2nyy_A Botulinum neurotoxin ty 96.7 0.034 9.7E-07 69.9 18.0 168 50-231 900-1083(1295) 49 1epw_A Bontoxilysin B, botulin 96.7 0.042 1.2E-06 70.0 18.7 153 61-228 894-1067(1290) 50 2vxr_A Botulinum neurotoxin ty 96.5 0.046 1.3E-06 62.4 15.8 165 50-231 76-262 (482) 51 3qcw_A Neurexin-1-alpha; synap 96.3 0.03 8.5E-07 73.9 14.7 121 87-222 859-992 (1245) 52 2sli_A Intramolecular trans-si 96.1 0.066 1.9E-06 66.3 15.7 136 85-228 34-184 (679) 53 3ffz_A Botulinum neurotoxin ty 95.1 0.61 1.7E-05 59.0 18.3 164 51-231 876-1059(1252) 54 4b1m_A Levanase; hydrolase, CB 94.2 0.22 6.1E-06 51.1 10.1 89 87-182 65-157 (185) 55 1ei8_A Collagen-like peptide ( 89.0 0.64 1.8E-05 33.6 4.4 12 324-335 15-26 (29) 56 4ccd_A Galactocerebrosidase; h 88.2 3.6 0.0001 50.7 13.2 88 87-181 528-621 (654) 57 1ms9_A Trans-sialidase; trans- 87.7 8.1 0.00023 47.6 15.7 127 87-228 495-628 (648) 58 1pwb_A SP-D, PSP-D, pulmonary 77.9 0.54 1.5E-05 46.9 0.0 12 962-973 164-175 (177) 59 1pwb_A SP-D, PSP-D, pulmonary 74.8 0.73 2.1E-05 46.0 0.0 7 918-924 112-118 (177) 60 3w9a_A CCGH131A, putative unch 72.7 16 0.00045 39.4 9.6 76 87-175 93-175 (245) 61 4le3_A Beta-glucanase; GH131, 70.3 23 0.00064 38.4 10.1 77 87-175 94-181 (252) 62 2zzj_A Glucuronan lyase A; bet 69.4 95 0.0027 33.2 14.8 177 50-235 21-233 (238) 63 2dpr_A Conantokin-T, CON-T; co 56.6 5.9 0.00017 25.5 1.5 12 1005-1016 2-13 (21) 64 3zyp_A CIP1; metal binding pro 54.4 69 0.002 34.0 10.2 118 59-184 36-165 (218) 65 3imm_A Putative secreted glyco 48.9 22 0.00063 36.9 5.4 103 79-182 39-146 (201) 66 1buu_A Protein (mannose-bindin 45.3 5.4 0.00015 39.8 0.0 12 962-973 153-164 (168) 67 3s5q_A Putative glycosylhydrol 43.8 27 0.00077 36.7 5.1 102 79-182 52-159 (214) 68 3i8t_A Galectin-4; S-type lect 41.9 3.2E+02 0.009 27.4 12.8 121 60-181 10-135 (164) 69 3u1x_A Putative glycosyl hydro 41.6 48 0.0014 35.2 6.7 30 154-183 158-187 (236) 70 3wvj_A Beta-glucanase; thermos 39.8 3.8E+02 0.011 27.7 14.5 28 155-182 143-170 (220) 71 3h3l_A Putative sugar hydrolas 37.6 26 0.00075 37.5 3.9 103 80-182 70-179 (241) 72 3osd_A Putative glycosyl hydro 37.1 38 0.0011 36.9 5.1 28 155-182 178-205 (265) 73 3hbk_A Putative glycosyl hydro 34.8 1.2E+02 0.0033 32.5 8.4 28 155-182 162-190 (245) 74 3i4i_A 1,3-1,4-beta-glucanase; 33.5 5E+02 0.014 27.3 15.0 29 154-182 160-188 (234) 75 1o91_A Collagen alpha 1(VIII) 32.3 11 0.00032 38.5 0.0 55 876-936 70-125 (178) 76 4jqt_A Putative glycosyl hydro 30.6 1.8E+02 0.0051 33.7 9.7 98 79-181 44-153 (431) 77 1axk_A Gluxyn-1; bifunctional, 30.5 6.9E+02 0.019 28.8 14.2 68 155-226 83-158 (394) 78 3iln_A Laminarinase; jelly ROW 25.5 6E+02 0.017 26.8 12.0 34 149-182 158-191 (251) 79 1cpn_A Circularly permuted; hy 25.3 6.4E+02 0.018 25.9 16.0 70 155-228 83-160 (208) 80 4qhz_A Putative glycosyl hydro 25.3 58 0.0016 35.2 3.9 28 154-181 161-200 (246) 81 2ayh_A 1,3-1,4-beta-D-glucan 4 25.1 4.9E+02 0.014 26.8 10.9 28 155-182 141-168 (214) 82 1buu_A Protein (mannose-bindin 23.8 20 0.00057 35.6 0.0 8 829-836 70-77 (168) 83 4jqt_A Putative glycosyl hydro 23.6 1.1E+02 0.003 35.6 6.1 104 80-183 271-382 (431) 84 4bpz_A Endo-1,3-beta-glucanase 23.3 7.7E+02 0.022 26.1 13.0 32 151-182 179-210 (256) 85 1umz_A Xyloglucan endotransgly 23.2 8.4E+02 0.024 26.5 16.9 28 155-182 130-157 (278) 86 1ajo_A CPA16M-127, circularly 23.2 1.7E+02 0.0049 30.6 7.0 74 155-232 15-96 (214) 87 2uwa_A Cellulase; glycoside hy 22.8 8.3E+02 0.024 26.3 16.1 75 155-233 141-230 (274) 88 3h0o_A Beta-glucanase; 1,3-1,4 21.2 8.3E+02 0.024 25.7 12.5 29 154-182 91-119 (240) 89 3o5s_A Beta-glucanase; glycosy 20.8 5.5E+02 0.016 27.0 10.5 28 155-182 165-192 (238)No 1>1dy2_A Collagen alpha1(XV) chain; angiogenesis inhibitor; 2.0A {Mus musculus} SCOP: d.169.1.5 Probab=100.00 E-value=1.3e-62 Score=490.99 Aligned_cols=171 Identities=52% Similarity=0.974 Sum_probs=163.9 Q ss_pred CcceEEEEEcCCCCCCCCCccchhhHHHHHHHhhcCCCCceeEEeeccccCcccccCCCCC-CCccccCCCcEEecCccc Q FBpp0290336 807 EYETLRVAALNEPSTGDLQGIRGADFACYRQGRRAGLLGTFKAFLSSRVQNLDTIVRPADR-DLPVVNTRGDVLFNSWKG 885 (1017) Q Consensus 807 ~~~~l~l~al~~~~~G~~~Gi~GAD~~C~~~a~~~g~~gt~rA~Ls~~~~~~~~~v~~~dr-~~p~vn~~g~vl~~~~~~ 885 (1017) +.++|||||||+|++|||+ ||++||+|||++|++||||||||+++||+++|||++|| ++||||+||+|||+||++ T Consensus 6 ~~~~L~lvALN~P~sG~m~----AD~~C~~qAraaGl~gTfRAfLSs~~qdl~~iV~~~DR~~~PivNlkGevLf~sw~~ 81 (180) T 1dy2_A 6 ERPVLHLVALNTPVAGDIR----ADFQCFQQARAAGLLSTFRAFLSSHLQDLSTVVRKAERFGLPIVNLKGQVLFNNWDS 81 (180) T ss_dssp -CCCEEEEECSSCBCSBCC----HHHHHHHHHHHTTCCSCEEESSCBTTBCGGGSSCGGGSSSCCEECTTSCEEESCSGG T ss_pred CCccEEEEEcCCCCCCCch----HHHHHHHHHHHhCCCCceEEEeecccccCccccCHhHcCCCCeEcCCCCEEecCHHH Confidence 4479999999999999999 99999999999999999999999999999999999999 799999999999999999 Q ss_pred cccCCCCcccCCCceeecCCCccCCCCCCCcceEEecCCCCcccccCcccCcccCCCCCceeecccCCcccccccccccc Q FBpp0290336 886 IFNGQGGFFSQAPRIYSFSGKNVMTDSTWPMKMVWHGSLPNGERSMDTYCDAWHSGDHLKGSFASNLDGHKLLEQKRQSC 965 (1017) Q Consensus 886 l~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~k~vW~Gs~~~g~~~~~~~C~~W~s~~~~~~g~as~~~~~~~~~~~~~~C 965 (1017) ||++++++|+.+.+||+||+||||+|++||||.|||||++||++.+++||++|||++.+++|+||+|.+++||.|+.+|| T Consensus 82 lf~g~~~~l~~~~~Iysfdg~dVl~d~~wP~K~vWhGS~~~G~r~~d~~C~~W~s~~~~~~G~Assl~~g~ll~q~~~sC 161 (180) T 1dy2_A 82 IFSGDGGQFNTHIPIYSFDGRDVMTDPSWPQKVVWHGSNPHGVRLVDKYCEAWRTTDMAVTGFASPLSTGKILDQKAYSC 161 (180) T ss_dssp GGSSSCCBCCTTSCCBBTTSCBTTTCTTCSSCEEECCBCTTSCBCTTSBHHHHBCCCTTCEEEEEEGGGTBSSCCEEEET T ss_pred HhCCCCCccCCCCCeeccCCcccccCCCccccccccCCCCCCCCcccccccCCccCCCCceEeeeecCCCCcccCcccCC Confidence 99999889999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred cCCcEEEEEecccHHH Q FBpp0290336 966 DSKLIILCVEALSQDR 981 (1017) Q Consensus 966 ~~~~~~lCvE~~~~~~ 981 (1017) +++||||||||+.... T Consensus 162 ~~~~ivLCIEn~~~~~ 177 (180) T 1dy2_A 162 ANRLIVLCIENSFMTD 177 (180) T ss_dssp TSCBBCEEEECCC--- T ss_pred CCceEEEEEEcccccc Confidence 9999999999986543No 2>1koe_A Endostatin; angiogenesis inhibitor, collagen XVIII, non-collageneous domain, heparin-binding domain; 1.50A {Mus musculus} SCOP: d.169.1.5 PDB: 1dy0_A 1dy1_A 1bnl_A Probab=100.00 E-value=5.5e-62 Score=491.63 Aligned_cols=169 Identities=47% Similarity=0.910 Sum_probs=165.9 Q ss_pred ceEEEEEcCCCCCCCCCccchhhHHHHHHHhhcCCCCceeEEeeccccCcccccCCCCC-CCccccCCCcEEecCccccc Q FBpp0290336 809 ETLRVAALNEPSTGDLQGIRGADFACYRQGRRAGLLGTFKAFLSSRVQNLDTIVRPADR-DLPVVNTRGDVLFNSWKGIF 887 (1017) Q Consensus 809 ~~l~l~al~~~~~G~~~Gi~GAD~~C~~~a~~~g~~gt~rA~Ls~~~~~~~~~v~~~dr-~~p~vn~~g~vl~~~~~~l~ 887 (1017) ++|||||||+||+|||+||+|||++||+||+++|++||||||||+++|++++||+++|| ++||||+||||||+||+||| T Consensus 2 ~~l~lvaln~p~~GnlgGi~GAD~~C~~~A~aaGl~gtfRAfLSs~~q~~~~iV~~~dr~~~P~vN~kg~vl~~~~~~l~ 81 (172) T 1koe_A 2 PVLHLVALNTPLSGGMRGIRGADFQCFQQARAVGLSGTFRAFLSSRLQDLYSIVRRADRGSVPIVNLKDEVLSPSWDSLF 81 (172) T ss_dssp CCEEEEECSSCBCSCSSHHHHHHHHHHHHHHHTTCCSCEEESCCBTTBCGGGGSCGGGTTTCCEECTTCCEEESCHHHHT T ss_pred CceEEEEeCCCcCCCcccchhHHHHHHHHHHhcCCCCeeEEEEEcccCCccceeccccccCCCeECCcCcEEeCCHHHhc Confidence 58999999999999999999999999999999999999999999999999999999999 79999999999999999999 Q ss_pred cCCCCcccCCCceeecCCCccCCCCCCCcceEEecCCCCcccccCcccCcccCCCCCceeecccCCcccccccccccccC Q FBpp0290336 888 NGQGGFFSQAPRIYSFSGKNVMTDSTWPMKMVWHGSLPNGERSMDTYCDAWHSGDHLKGSFASNLDGHKLLEQKRQSCDS 967 (1017) Q Consensus 888 ~~~~~~~~~~~~i~~f~~~~~~~~~~~~~k~vW~Gs~~~g~~~~~~~C~~W~s~~~~~~g~as~~~~~~~~~~~~~~C~~ 967 (1017) ++++++|+++..||+||+||||+|++||+|+|||||+++|+|..++||++|||++.+++|+||+|++++||+|+.++|++ T Consensus 82 ~~~~~~~~~~~~i~sfn~~dvl~d~~wp~k~vWtGs~~~G~~~~~~~C~~Wts~~~~~~G~assl~~~~ll~q~~~sCs~ 161 (172) T 1koe_A 82 SGSQGQLQPGARIFSFDGRDVLRHPAWPQKSVWHGSDPSGRRLMESYCETWRTETTGATGQASSLLSGRLLEQKAASCHN 161 (172) T ss_dssp SSSCSBCCTTCCCBBTTSCBTTTCTTSSSCEEECCBCTTSCBCTTSBHHHHTCCCTTCEEEEEEGGGTBSCCCEEEETTS T ss_pred CCCCccccCCCceEccCCCccccCCCCccceeEECCCCCCcCcCCCcccCCcCCCCCceEeeccCCCCCcccCcCCCcCC Confidence 99999999999999999999999999999999999999999988999999999999999999999999999999999999 Q ss_pred CcEEEEEecc Q FBpp0290336 968 KLIILCVEAL 977 (1017) Q Consensus 968 ~~~~lCvE~~ 977 (1017) +|+||||||+ T Consensus 162 ~~~vLCIE~~ 171 (172) T 1koe_A 162 SYIVLCIENS 171 (172) T ss_dssp CBBCEEEECC T ss_pred CcEEEEEeec Confidence 9999999996No 3>2uur_A Collagen alpha-1(IX) chain; glycoprotein, hydroxylation, structural protein, NC4, collagen IX, polymorphism, extracellular matrix; 1.8A {Homo sapiens} Probab=100.00 E-value=2e-34 Score=311.98 Aligned_cols=194 Identities=18% Similarity=0.266 Sum_probs=163.8 Q ss_pred cchhcccchhcCCC---CCCcEEEeccCCC-CcceEEcCCCccCCCcccccCCcCC-ceEEEEEEeecCCCC---ceEEE Q FBpp0290336 35 ALAEYTLTDIMNNN---QFAGIEFGEAEDG-FPAFRFLQTADVKSPYRMLLPEKLY-EFAILITFRQSSLKG---GYLFS 106 (1017) Q Consensus 35 ~l~e~dL~~l~g~~---~~~GV~~v~G~d~-~pAy~f~~~a~l~~pt~~~fP~~~~-eFSll~TlR~~~~~~---g~Lfs 106 (1017) .++.|||+++++.+ .+.||++++|++. ++||+|.+.+++.+|++++||++|+ ||||++|||+.+.+. |+||+ T Consensus 30 ~~~~~Dll~~l~l~~~~~~~gv~~v~G~~~~~~ay~~~~~a~l~~pt~~~fP~~lp~eFsi~~tlr~~~~~~~~~~~Lfs 109 (245) T 2uur_A 30 DLPGFDLISQFQVDKAASRRAIQRVVGSATLQVAYKLGNNVDFRIPTRNLYPSGLPEEYSFLTTFRMTGSTLKKNWNIWQ 109 (245) T ss_dssp CCCEEEHHHHTTHHHHHTTTSSCEEECSSTTCEEEEECSSCCCEEEHHHHCTTCCCSSEEEEEEEECCGGGGGCEEEEEE T ss_pred CCCCcceeHhhCCCCcCCCCCeeEccCCCCCccEEEECCCcccCcchHHhccccCCCCEEEEEEEEccCCCCCCceEEEE Confidence 44555555555544 3799999999875 8999999999999999999999999 999999999865443 59999 Q ss_pred EEeCCCCeeEEEEEEcccccCceeEEEEEEecccccceeEeEeec--ccCCCCeeEEEEEEeCCeEEEEEcCccceeecc Q FBpp0290336 107 VVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLASFGV--AHVPDKWNSIALQVLSDKVSFYYDCELRNTTLV 184 (1017) Q Consensus 107 I~~~~~~~~qlgL~ls~~~~~~~~i~l~Y~~~~~~~~q~~~sF~v--~l~Dg~WHrlaLsV~g~~VtLyVDC~~~~t~~l 184 (1017) |++. ++.+||+|+|++. ++.|.|+|++.++.. +.++|.+ +++|++||||+|+|++++|+|||||+++.++.+ T Consensus 110 i~~~-~~~~qlgl~l~~~---~~~v~~~y~~~~G~~--~~~~F~~~~~l~dg~WH~lalsV~~~~VtLyvDC~~~~~~~l 183 (245) T 2uur_A 110 IQDS-SGKEQVGIKINGQ---TQSVVFSYKGLDGSL--QTAAFSNLSSLFDSQWHKIMIGVERSSATLFVDCNRIESLPI 183 (245) T ss_dssp EECT-TSCEEEEEEEEGG---GTEEEEEEEBTTSCE--EEEEECCCGGGCSSSCEEEEEEEETTEEEEEETTEEEEEEEC T ss_pred EEcC-CCCEEEEEEEcCC---CCEEEEEEECCCCCE--EEEEECCCCccCCCCEEEEEEEEECCEEEEEEeCCcCccccc Confidence 9997 6799999999986 567999999865433 6789965 999999999999999999999999999999999 Q ss_pred cCCCcccccCCCeeEEEEecccccCC-ccccceeeeEEeeCcccc-cccCCCCCCC Q FBpp0290336 185 TREPIELVFDSASTLYIGQAGSIIGG-KFEGYLEKINVYGNPDAI-NVTCMPPPKA 238 (1017) Q Consensus 185 ~r~~~~l~~~~~~~l~IGq~g~~~~~-~F~G~LQ~L~i~~dp~~a-~~~C~~~~~~ 238 (1017) .+. . .++.++.++||++.. .++ .|+|+||+|+|+|||+++ +++|++++.+ T Consensus 184 ~~~-~--~l~~~g~~~lG~~~~-~~~~~f~G~lQ~l~i~~~p~~a~~~~C~e~~~~ 235 (245) T 2uur_A 184 KPR-G--PIDIDGFAVLGKLAD-NPQVSVPFELQWMLIHCDPLRPRRETCHELPAR 235 (245) T ss_dssp CCB-C--CCCCSSEEEEEEESS-CTTCBCCEEEEEEEEESCTTGGGGCCCTTCC-- T ss_pred cCC-C--ccCcCCEEEEEeccC-CCCCeEEEEEEEEEEEcCCCchhhCccccCCCC Confidence 764 2 345678999999953 445 899999999999999998 9999999753No 4>2erf_A Thrombospondin-1; TSP-1, N-terminal TSPN, HBD, sugar binding protein; 1.45A {Homo sapiens} SCOP: b.29.1.4 PDB: 2es3_A 1z78_A Probab=100.00 E-value=1.2e-32 Score=291.21 Aligned_cols=194 Identities=16% Similarity=0.190 Sum_probs=161.5 Q ss_pred ccchhcccchhcCCCC-CCcEEEeccCCC-CcceEEcCCCccCCCcccccCCc-----CC-ceEEEEEEeecCCCCceEE Q FBpp0290336 34 DALAEYTLTDIMNNNQ-FAGIEFGEAEDG-FPAFRFLQTADVKSPYRMLLPEK-----LY-EFAILITFRQSSLKGGYLF 105 (1017) Q Consensus 34 D~l~e~dL~~l~g~~~-~~GV~~v~G~d~-~pAy~f~~~a~l~~pt~~~fP~~-----~~-eFSll~TlR~~~~~~g~Lf 105 (1017) |+++.|||+++++.+. +.||++++|++. ++||+|.+.+++.+|++++||+. |+ ||||++|||+.+++.++|| T Consensus 2 ~d~~~~Dll~~~~l~~~~~gv~~~~G~~~~~~ay~~~~~a~l~~~t~~~~P~~~~~l~~~~~Fsi~~tlr~~~~~~~~L~ 81 (209) T 2erf_A 2 GDNSVFDIFELTGAARKGSGRRLVKGPDPSSPAFRIEDANLIPPVPDDKFQDLVDAVRTEKGFLLLASLRQMKKTRGTLL 81 (209) T ss_dssp CTTCEEEHHHHHTTTTSCSSEEEECCSSTTSCEEEESCGGGSCCCCHHHHHHHHHHHHHHTEEEEEEEEEECTTCEEEEE T ss_pred CCcceeeehhhhCCCCccCceEEeeCCCCCccEEEEecccccccCchHhccchhhhhcCCCcEEEEEEEEeCCCCCeEEE Confidence 5677788888888776 789999999886 99999999999999999999999 88 9999999999999999999 Q ss_pred EEEeCCCCeeEEEEEEcccccCceeEEEEEEecccccceeEeEe-ecccCCCCeeEEEEEEeCCeEEEEEcCccceeecc Q FBpp0290336 106 SVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLASF-GVAHVPDKWNSIALQVLSDKVSFYYDCELRNTTLV 184 (1017) Q Consensus 106 sI~~~~~~~~qlgL~ls~~~~~~~~i~l~Y~~~~~~~~q~~~sF-~v~l~Dg~WHrlaLsV~g~~VtLyVDC~~~~t~~l 184 (1017) +|++..+..+||+|++++. .++|.|+|++.+ .++.++| .++++|++||||+|+|++++|+|||||+++.++.+ T Consensus 82 si~~~~~~~~~lgl~l~~~---~~~l~~~y~~~g---~~~~~~f~~~~l~dg~WH~lal~V~~~~V~LyvDC~~~~~~~l 155 (209) T 2erf_A 82 ALERKDHSGQVFSVVSNGK---AGTLDLSLTVQG---KQHVVSVEEALLATGQWKSITLFVQEDRAQLYIDCEKMENAEL 155 (209) T ss_dssp EEEETTSSCEEEEEEEETT---TTEEEEEEEETT---EEEEEEESSCCCCSSSEEEEEEEEETTEEEEEETTTEEEEEEC T ss_pred EEECCCCCEEEEEEEEeCC---CcEEEEEEecCC---CEEEEEEcCccccCCcEEEEEEEEECCEEEEEECCcccceeEc Confidence 9999855557899999986 457999999743 3466788 59999999999999999999999999999999999 Q ss_pred cCCCcccccCCCeeEEEEecccc--cCCccccceeeeEEeeCcccc---cccCCC Q FBpp0290336 185 TREPIELVFDSASTLYIGQAGSI--IGGKFEGYLEKINVYGNPDAI---NVTCMP 234 (1017) Q Consensus 185 ~r~~~~l~~~~~~~l~IGq~g~~--~~~~F~G~LQ~L~i~~dp~~a---~~~C~~ 234 (1017) ++.. ...++.+..+++|++... ..++|+|+||+|+|+++|+++ +..||+ T Consensus 156 ~~~~-~~~~~~g~~~~~G~~~~~~g~~~~F~G~iq~l~i~~~~~~~~~~~~~~c~ 209 (209) T 2erf_A 156 DVPI-QSVFTRDLASIARLRIAKGGVNDNFQGVLQNVRFVFGTTPEDILRNKGCS 209 (209) T ss_dssp SSCG-GGTCCTTHHHHEEEEESCCTTTCBCCEEEEEEEEECSCCHHHHHHTTCCC T ss_pred CCcc-ccccCCCCeeeEEEEecCCCCcccceEEeeEEEEEeCCCHHHhhhhccCC Confidence 8752 222344444466665211 124899999999999999875 566664No 5>3hqv_A Collagen alpha-1(I) chain; native, in SITU, molecular envelope, triple-helical, supermolecular, supramolecular, packing structure; 5.16A {Rattus norvegicus} SCOP: i.25.1.1 PDB: 3hr2_A Probab=99.97 E-value=3.9e-29 Score=314.42 Aligned_cols=31 Identities=45% Similarity=0.787 Sum_probs=13.5 Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC Q FBpp0290336 654 GPKGEPGVDSRSSFFGDASYYGRPEPPRQPG 684 (1017) Q Consensus 654 G~~G~~G~~g~~~~~g~~~~~G~pgppg~~g 684 (1017) |+.|++|..+..+..|..+.+|.+++++.++ T Consensus 998 G~~G~~G~~G~~G~~G~~G~~G~pGppGpPG 1028 (1056) T 3hqv_A 998 GPIGPPGPRGRTGDSGPAGPPGPPGPPGPPG 1028 (1056) T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC Confidence 3444444444444444444444444444444No 6>1za4_A Thrombospondin 1; TSP-1, NTSP-1, HBD, arixtra, cell adhesion; HET: SGN; 1.90A {Homo sapiens} SCOP: b.29.1.4 PDB: 2ouh_A 2ouj_A Probab=99.97 E-value=2.4e-31 Score=288.75 Aligned_cols=195 Identities=18% Similarity=0.266 Sum_probs=155.9 Q ss_pred ccchhcccchhcCCCC-CCcEEEeccCCC-CcceEEcCCCccCCCcccccCCc---C--C-ceEEEEEEeecCCCCceEE Q FBpp0290336 34 DALAEYTLTDIMNNNQ-FAGIEFGEAEDG-FPAFRFLQTADVKSPYRMLLPEK---L--Y-EFAILITFRQSSLKGGYLF 105 (1017) Q Consensus 34 D~l~e~dL~~l~g~~~-~~GV~~v~G~d~-~pAy~f~~~a~l~~pt~~~fP~~---~--~-eFSll~TlR~~~~~~g~Lf 105 (1017) |+.+.|||+++++.+. +.||++++|++. ++||+|.+.+.+..+++++||.+ | + ||||++|||+.++++|+|| T Consensus 12 ~d~~~~DLl~~lgl~~~~~GV~~~~G~~~~~~Ay~~~~~~~~~~~t~~~~P~g~~~~~~p~eFsi~~tlr~~~~~~~~Lf 91 (251) T 1za4_A 12 GDNSVFDIFELTGAARKGSGRRLVKGPDPSSPAFRIEDANLIPPVPDDKFQDLVDAVRTEKGFLLLASLRQMKKTRGTLL 91 (251) T ss_dssp ---CEEEHHHHHCCCCTTSSEEEECCSSTTSCEEEESCGGGSCCCCHHHHHHHHHHHHHHTEEEEEEEEEECTTCEEEEE T ss_pred CcccCcceehhhCCCCccCCeEEccCCCCCccEEEEcCcccccCChhHhCcchhhccCCCCcEEEEEEEEecCCCCcEEE Confidence 4577788888888876 689999999886 99999999999999999999994 8 8 9999999999999999999 Q ss_pred EEEeCCCCeeEEEEEEcccccCceeEEEEEEecccccceeEeEe-ecccCCCCeeEEEEEEeCCeEEEEEcCccceeecc Q FBpp0290336 106 SVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLASF-GVAHVPDKWNSIALQVLSDKVSFYYDCELRNTTLV 184 (1017) Q Consensus 106 sI~~~~~~~~qlgL~ls~~~~~~~~i~l~Y~~~~~~~~q~~~sF-~v~l~Dg~WHrlaLsV~g~~VtLyVDC~~~~t~~l 184 (1017) +|++..+..++|+|+|++. .++|.|+|++.+ .+++++| .++++|++||||+|+|++++|+|||||+++.++.+ T Consensus 92 si~d~~~~~q~lgv~l~g~---~~~l~~~y~~~G---~~~~~~f~~~~L~dg~WH~lalsV~~~~VtLyvDC~~~~~~~l 165 (251) T 1za4_A 92 ALERKDHSGQVFSVVSNGK---AGTLDLSLTVQG---KQHVVSVEEALLATGQWKSITLFVQEDRAQLYIDCEKMENAEL 165 (251) T ss_dssp EEEETTSSCEEEEEEEETT---TTEEEEEEEETT---EEEEEEESSCCCCSSSCEEEEEEEETTEEEEEETTSCCEEEEC T ss_pred EEEcCCCCEEEEEEEEeCC---CcEEEEEEecCC---CEEEEEEeccccCCCcEEEEEEEEECCEEEEEECCcccccccc Confidence 9999855555589999986 457999999843 3467788 59999999999999999999999999999999988 Q ss_pred cCCCcccccCCCe----eEEEEecccccCCccccceeeeEE--eeCcccc-cccCCCCCC Q FBpp0290336 185 TREPIELVFDSAS----TLYIGQAGSIIGGKFEGYLEKINV--YGNPDAI-NVTCMPPPK 237 (1017) Q Consensus 185 ~r~~~~l~~~~~~----~l~IGq~g~~~~~~F~G~LQ~L~i--~~dp~~a-~~~C~~~~~ 237 (1017) ++....+ +..+. .+++++.+ ..+.|+|+||+|+| +|+++++ ++.||+++. T Consensus 166 ~~~~~~~-~~~G~~~~g~~~~~~g~--~~~~f~G~lq~L~Iv~~~d~~~a~~~~~Ce~~~ 222 (251) T 1za4_A 166 DVPIQSV-FTRDLASIARLRIAKGG--VNDNFQGVLQNVRFVFGTTPEDILRNKGCSSST 222 (251) T ss_dssp SSCGGGT-SCTTGGGTEEEEESCCS--TTCBCCEEEEEEEEECSCCHHHHHHHTTCC--- T ss_pred cCCcccc-cCCCcEEEEEEEecCCC--CccceEEEEEEEEEEccCChhhhccccCCCCCC Confidence 8753233 33333 33333321 23589999999999 7888776 567777765No 7>3hqv_B Collagen alpha-2(I) chain; native, in SITU, molecular envelope, triple-helical, supermolecular, supramolecular, packing structure; 5.16A {Rattus norvegicus} SCOP: i.25.1.1 PDB: 3hr2_B Probab=99.97 E-value=7.3e-29 Score=311.28 Aligned_cols=9 Identities=56% Similarity=1.261 Sum_probs=3.2 Q ss_pred CCCCCCCCC Q FBpp0290336 675 GRPEPPRQP 683 (1017) Q Consensus 675 G~pgppg~~ 683 (1017) |.+++++.+ T Consensus 1014 G~pGppGpP 1022 (1028) T 3hqv_B 1014 GPPGPPGPP 1022 (1028) T ss_pred CCCCCCCCC Confidence 333333333No 8>3hsh_A Endostatin, collagen alpha-1(XVIII) chain; extracellular matrix, basement membrane, collagen trimerization domain, folding, association; 1.80A {Homo sapiens} PDB: 3hon_A Probab=99.55 E-value=2.8e-15 Score=123.82 Aligned_cols=53 Identities=26% Similarity=0.477 Sum_probs=51.0 Q ss_pred CceeEeccHHHHHhccCCCCCCceeeecccceEEEEEcCCceEecccccccCC Q FBpp0290336 716 PGAVTFQNIDEMTKKSALNPPGTLAYITEEEALLVRVNKGWQYIALGTLVPIA 768 (1017) Q Consensus 716 pgv~t~~n~~~m~~~s~~s~eGtlaYi~~~~~l~vrv~~g~~~I~lg~~~p~~ 768 (1017) .|+++|+|+++|+++++..+||||+|++|+++|||||+||||+|+|+.++|++ T Consensus 3 ~gv~~~~t~~~ml~~~~~~~eGtL~yv~d~~eLyiRVr~Gwr~V~Lg~~~pip 55 (56) T 3hsh_A 3 SGVRLWATRQAMLGQVHEVPEGWLIFVAEQEELYVRVQNGFRKVQLEARTPLP 55 (56) T ss_dssp CCEEEESSHHHHHHHGGGSCTTCEEEETTTTEEEEEETTEEEEECEEEEEECC T ss_pred CcEEEEecHHHHHhhCccCCCeEEEEEEecceEEEEEcCcEEEEeecccccCC Confidence 36899999999999999999999999999999999999999999999999986No 9>3n3f_A Collagen alpha-1(XV) chain; extracellular matrix, basement membrane, collagen trimerization domain, folding, association, chain selection helix; 2.00A {Homo sapiens} Probab=99.54 E-value=4.4e-15 Score=121.87 Aligned_cols=52 Identities=35% Similarity=0.742 Sum_probs=49.8 Q ss_pred ceeEeccHHHHHhccCCCCCCceeeecccceEEEEEcCCceEecccccccCC Q FBpp0290336 717 GAVTFQNIDEMTKKSALNPPGTLAYITEEEALLVRVNKGWQYIALGTLVPIA 768 (1017) Q Consensus 717 gv~t~~n~~~m~~~s~~s~eGtlaYi~~~~~l~vrv~~g~~~I~lg~~~p~~ 768 (1017) ++++|+|+++|+++++..+||||+|++|+++|||||+||||+|+||+++|++ T Consensus 2 ~v~~~~t~~~M~~~~~~~~eGtL~yv~d~~eLyiRVr~Gwr~V~Lg~~ip~p 53 (54) T 3n3f_A 2 LVTAFSNMDDMLQKAHLVIEGTFIYLRDSTEFFIRVRDGWKKLQLGELIPIP 53 (54) T ss_dssp CEEEESSHHHHHTTGGGSCTTEEEEETTTTEEEEEETTEEEECCCCCCCCCC T ss_pred CcEEEecHHHHHhhCccCCCeEEEEEEecceEEEEEcCceeeeeecccccCC Confidence 4789999999999999999999999999999999999999999999999874No 10>3sh4_A LG3 peptide; actin disassambly, integrin alpha12 BETA1, metal binding Pro; 1.50A {Homo sapiens} SCOP: b.29.1.0 PDB: 3sh5_A Probab=98.90 E-value=2.2e-08 Score=103.45 Aligned_cols=151 Identities=12% Similarity=0.091 Sum_probs=101.0 Q ss_pred CcceEEcCCCccCCCcccccCCc-CC-ceEEEEEEeecCCCCceEEEEEeC----CCCeeEEEEEEcccccCceeEEEEE Q FBpp0290336 62 FPAFRFLQTADVKSPYRMLLPEK-LY-EFAILITFRQSSLKGGYLFSVVNP----LDTVVQLGVHLSPVVKNSYNVSLVY 135 (1017) Q Consensus 62 ~pAy~f~~~a~l~~pt~~~fP~~-~~-eFSll~TlR~~~~~~g~LfsI~~~----~~~~~qlgL~ls~~~~~~~~i~l~Y 135 (1017) ..+..|...+.+..|... |+.. .. +|+|.++||... ..+.||.+.+. .....+|.|+|..- .|.|.| T Consensus 5 ~~~~~F~g~sy~~~~~~~-~~~~~~~~~~~is~~frT~~-~~Glll~~~~~~~~~~~~~d~~~l~l~~G-----~l~~~~ 77 (195) T 3sh4_A 5 QYGAYFHDDGFLAFPGHV-FSRSLPEVPETIELEVRTST-ASGLLLWQGVEVGEAGQGKDFISLGLQDG-----HLVFRY 77 (195) T ss_dssp TTEEEEEEEEEEEECGGG-GCCCSTTCCEEEEEEEEECC-SSEEEEEECCCTTCTTSTTCEEEEEEETT-----EEEEEE T ss_pred ccccEECCCceEEECccc-ccccccCCCcEEEEEEEeCC-CCeEEEEccCcccCCCCCCCeEEEEEECC-----EEEEEE Confidence 345667655556655543 3433 24 899999999654 44688876541 23457888888654 377777 Q ss_pred EecccccceeEeEeecccCCCCeeEEEEEEeCCeEEEEEcCccceeecccCCCcccccCCCeeEEEEecccc-------c Q FBpp0290336 136 TQADQNIGRKLASFGVAHVPDKWNSIALQVLSDKVSFYYDCELRNTTLVTREPIELVFDSASTLYIGQAGSI-------I 208 (1017) Q Consensus 136 ~~~~~~~~q~~~sF~v~l~Dg~WHrlaLsV~g~~VtLyVDC~~~~t~~l~r~~~~l~~~~~~~l~IGq~g~~-------~ 208 (1017) ....+. ..+.....+.|++||+|+|...+..++|||||....+...+..... ++....||||..... . T Consensus 78 ~~g~g~---~~i~s~~~l~Dg~WH~V~v~~~~~~~~L~VD~~~~~~~~~~~~~~~--l~~~~~l~iGG~~~~~~~~~~~~ 152 (195) T 3sh4_A 78 QLGSGE---ARLVSEDPINDGEWHRVTALREGRRGSIQVDGEELVSGRSPGPNVA--VNAKGSVYIGGAPDVATLTGGRF 152 (195) T ss_dssp ECSSCE---EEEEEEEECCSSSCEEEEEEEETTEEEEEETTCCCEEEECCSSCCC--CCCCSCEEESCCTTHHHHTTTSC T ss_pred ECCCCE---EEEEcCCeecCCCeEEEEEEEeCCEEEEEECCcceeeEECCCccce--ecCCCCEEECCCCCccccccccc Confidence 644321 2233467788999999999999999999999998766544432222 334568999876211 1 Q ss_pred CCccccceeeeEEeeC Q FBpp0290336 209 GGKFEGYLEKINVYGN 224 (1017) Q Consensus 209 ~~~F~G~LQ~L~i~~d 224 (1017) ...|+|-|++|+|.-. T Consensus 153 ~~~F~GCi~~v~i~~~ 168 (195) T 3sh4_A 153 SSGITGCVKNLVLHSA 168 (195) T ss_dssp CCCCSEEEEEEEEEEC T ss_pred cCCcEEEeeEEEECCc Confidence 3469999999999653No 11>3v64_A Low-density lipoprotein receptor-related protein; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus} SCOP: b.29.1.4 PDB: 3v65_A Probab=98.87 E-value=4.4e-08 Score=100.89 Aligned_cols=151 Identities=15% Similarity=0.189 Sum_probs=99.4 Q ss_pred cceEEcCCCccCCCccc-------ccCCc-CC-ceEEEEEEeecCCCCceEEEEEeCCCCeeEEEEEEcccccCceeEEE Q FBpp0290336 63 PAFRFLQTADVKSPYRM-------LLPEK-LY-EFAILITFRQSSLKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSL 133 (1017) Q Consensus 63 pAy~f~~~a~l~~pt~~-------~fP~~-~~-eFSll~TlR~~~~~~g~LfsI~~~~~~~~qlgL~ls~~~~~~~~i~l 133 (1017) .|+.|.....+..+... .||.. .. +|+|.++||... ..+.||...+..+...+|.|+|..- .|.| T Consensus 3 ~~~~F~G~syv~~~~~~~~~~~~~~~~~~~~~~~~~is~~frT~~-~~glll~~~~~~~~~~~~~l~l~~G-----~l~~ 76 (191) T 3v64_A 3 ETLAFDGRTYIEYLNAVIESELTNEIPAEKALQSNHFELSLRTEA-TQGLVLWIGKAAERADYMALAIVDG-----HLQL 76 (191) T ss_dssp CEEEEESSCCEEEECSCCCHHHHCCCCCCEEESEEEEEEEEECSC-SSEEEEEESCCSTTCCEEEEEEETT-----EEEE T ss_pred cceeECCceeEEecCccccccccccCcccccccceEEEEEEEeCC-CCeEEEEeCCCCCCCCEEEEEEECC-----EEEE Confidence 45666555554444321 23332 34 899999999765 4467776655334567888888543 3777 Q ss_pred EEEecccccceeEeEeecccCCCCeeEEEEEEeCCeEEEEEcCccceeecccCCCcccccCCCeeEEEEecccc------ Q FBpp0290336 134 VYTQADQNIGRKLASFGVAHVPDKWNSIALQVLSDKVSFYYDCELRNTTLVTREPIELVFDSASTLYIGQAGSI------ 207 (1017) Q Consensus 134 ~Y~~~~~~~~q~~~sF~v~l~Dg~WHrlaLsV~g~~VtLyVDC~~~~t~~l~r~~~~l~~~~~~~l~IGq~g~~------ 207 (1017) .|...++. ..+.....+.|++||+|+|...+..++||||+....+...+.....+ +....+|||..... T Consensus 77 ~~~~g~~~---~~~~~~~~v~Dg~WH~V~v~~~~~~~~L~vD~~~~~~~~~~~~~~~l--~~~~~l~iGg~~~~~~~~~~ 151 (191) T 3v64_A 77 SYDLGSQP---VVLRSTVKVNTNRWLRIRAHREHREGSLQVGNEAPVTGSSPLGATQL--DTDGALWLGGLQKLPVGQAL 151 (191) T ss_dssp EEESSSCC---EEEEEEEECTTSSCEEEEEEEETTEEEEEETTSCCEEEECCTTCCCE--EECSEEEESCCSSCCSSCCS T ss_pred EEECCCCc---EEEEeCCEecCCCcEEEEEEEEccEEEEEECCcceEeeECCCCcccC--cCCCCEEECCCCcccccccc Confidence 77654322 23334567889999999999999999999999876665443322223 33568999976321 Q ss_pred ---cCCccccceeeeEEeeC Q FBpp0290336 208 ---IGGKFEGYLEKINVYGN 224 (1017) Q Consensus 208 ---~~~~F~G~LQ~L~i~~d 224 (1017) ....|+|-|++|+|... T Consensus 152 ~~~~~~~F~Gci~~v~i~~~ 171 (191) T 3v64_A 152 PKAYGTGFVGCLRDVVVGHR 171 (191) T ss_dssp CGGGTSBCEEEEEEEEETTE T ss_pred cccccCCCeEEeeEEEECCE Confidence 13469999999999644No 12>3pve_A Agrin, AGRN protein; mRNA splicing, structural genomics, PSI-2, protein structure initiative; 1.40A {Mus musculus} SCOP: b.29.1.0 Probab=98.78 E-value=1.4e-07 Score=97.30 Aligned_cols=151 Identities=13% Similarity=0.110 Sum_probs=97.8 Q ss_pred cceEEcCCCccCCCcccccCCcCC-ceEEEEEEeecCCCCceEEEEEeC-CCCeeEEEEEEcccccCceeEEEEEEeccc Q FBpp0290336 63 PAFRFLQTADVKSPYRMLLPEKLY-EFAILITFRQSSLKGGYLFSVVNP-LDTVVQLGVHLSPVVKNSYNVSLVYTQADQ 140 (1017) Q Consensus 63 pAy~f~~~a~l~~pt~~~fP~~~~-eFSll~TlR~~~~~~g~LfsI~~~-~~~~~qlgL~ls~~~~~~~~i~l~Y~~~~~ 140 (1017) .+..|...+.+..+....++..+. +|+|.+.||.... .+.||...+. .....++.|+|..- .|.|.|....+ T Consensus 10 ~~~~F~g~syl~~~~~~~~~~~~~~~~~isl~frT~~~-~GlLl~~~~~~~~~~d~~~l~l~~G-----~l~~~~~~g~~ 83 (189) T 3pve_A 10 FLADFNGFSYLELKGLHTFERDLGEKMALEMVFLARGP-SGLLLYNGQKTDGKGDFVSLALHNR-----HLEFRYDLGKG 83 (189) T ss_dssp CCEEEESSCEEEECCGGGC-------CEEEEEEEESSS-CEEEEEEESCC-CCSCEEEEEEETT-----EEEEEEESSSC T ss_pred eeeEECCCceEEEcCcccccccccceEEEEEEEecCCC-CeEEEEecCCCCCCCCeEEEEEECC-----EEEEEEECCCC Confidence 345666666666666665555555 8999999997654 4688877753 13356888888654 37777764332 Q ss_pred ccceeEeEeecccCCCCeeEEEEEEeCCeEEEEEcCccceeecccCCCcccccCCCeeEEEEecccc--------cCCcc Q FBpp0290336 141 NIGRKLASFGVAHVPDKWNSIALQVLSDKVSFYYDCELRNTTLVTREPIELVFDSASTLYIGQAGSI--------IGGKF 212 (1017) Q Consensus 141 ~~~q~~~sF~v~l~Dg~WHrlaLsV~g~~VtLyVDC~~~~t~~l~r~~~~l~~~~~~~l~IGq~g~~--------~~~~F 212 (1017) ...+.....+.|++||+|+|...+..++||||+....+...+.....+ +....||||..... ....| T Consensus 84 ---~~~~~s~~~v~Dg~WH~V~v~~~~~~~~L~vD~~~~~~~~~~~~~~~l--~~~~~l~iGG~~~~~~~~~~~~~~~~F 158 (189) T 3pve_A 84 ---AAIIRSKEPIALGTWVRVFLERNGRKGALQVGDGPRVLGESPVPHTML--NLKEPLYVGGAPDFSKLARGAAVASGF 158 (189) T ss_dssp ---EEEEECSSCCCTTSEEEEEEEEETTEEEEEETTSCCEEEECCSSCCCC--CCCSCEEESCCSCGGGSCGGGCCCSBC T ss_pred ---eEEEeCCCcccCCCeEEEEEEEeCCEEEEEECCCceeeeEcCCCccee--cCCCCEEECccCChhhcccccccCCCC Confidence 122333567889999999999999999999999876554443222233 33467999875211 13469 Q ss_pred ccceeeeEEeeC Q FBpp0290336 213 EGYLEKINVYGN 224 (1017) Q Consensus 213 ~G~LQ~L~i~~d 224 (1017) .|-|++|+|... T Consensus 159 ~GCi~~v~i~~~ 170 (189) T 3pve_A 159 DGAIQLVSLRGH 170 (189) T ss_dssp EEEEEEEEETTE T ss_pred eEEeeEEEECCE Confidence 999999998643No 13>4pbp_A C-reactive protein; acute phase protein, pentraxin; 1.65A {Danio rerio} PDB: 4pbo_A Probab=98.78 E-value=8e-08 Score=100.14 Aligned_cols=158 Identities=17% Similarity=0.165 Sum_probs=102.1 Q ss_pred EEeccCCCCcceEEcCC---CccCCCcccccCCcCCceEEEEEEeecCC--CCceEEEEEeCCCCeeEEEEEEcccccCc Q FBpp0290336 54 EFGEAEDGFPAFRFLQT---ADVKSPYRMLLPEKLYEFAILITFRQSSL--KGGYLFSVVNPLDTVVQLGVHLSPVVKNS 128 (1017) Q Consensus 54 ~~v~G~d~~pAy~f~~~---a~l~~pt~~~fP~~~~eFSll~TlR~~~~--~~g~LfsI~~~~~~~~qlgL~ls~~~~~~ 128 (1017) +++.|.. ..|+.|... +.+..+....+ ...+|+|.+++|+... ....||+..+.. .. .|.|.++.. T Consensus 2 ~~~~g~~-g~al~F~g~s~~~~v~~~~~~~~--~~~~fTi~~Wvk~~~~~~~~~~i~s~~~~~-~~-~~~l~~~~~---- 72 (210) T 4pbp_A 2 EFFKNLS-GKVLQFKTATDNSYVKLYPEKPL--SLSAFTLCMRVATELPLDREVILFAYYTPD-VD-ELNVWRERD---- 72 (210) T ss_dssp ---CCCT-TEEEEECSCCSSCEEEEECSSCC--CBSEEEEEEEEECCSCTTSCEEEEEEEETT-EE-EEEEEECTT---- T ss_pred eeeeccc-CcEEECCCCCccCeEEEcCCCCC--CcCCEEEEEEEEcCCCCCCCceEEEEEcCC-CC-cEEEEEcCC---- Confidence 4455433 467888654 33444332211 1229999999999766 457899988753 22 666666532 Q ss_pred eeEEEEEEecccccceeEeEeecccCCCCeeEEEEEEeCC--eEEEEEcCccceeecccCCCcccccCCCeeEEEEeccc Q FBpp0290336 129 YNVSLVYTQADQNIGRKLASFGVAHVPDKWNSIALQVLSD--KVSFYYDCELRNTTLVTREPIELVFDSASTLYIGQAGS 206 (1017) Q Consensus 129 ~~i~l~Y~~~~~~~~q~~~sF~v~l~Dg~WHrlaLsV~g~--~VtLyVDC~~~~t~~l~r~~~~l~~~~~~~l~IGq~g~ 206 (1017) ..+.|.....+. .+.+...+.+++||+|++.+.+. .++||||.+++.+..+... ..+.....++||+... T Consensus 73 ~~~~~~~~~~~~-----~~~~~~~~~~~~W~hva~t~d~~~g~~~lYvnG~~~~~~~~~~~---~~~~~~~~l~iG~~~~ 144 (210) T 4pbp_A 73 GRVSLYIQSSKD-----AAFFRLPPLSTLQTHLCVAWESATGLTAFWMDGRRSLHQVYRKG---YSIRSGGTVVLGQDPD 144 (210) T ss_dssp SCEEEEESCSSC-----CEEECCCCCCSSCEEEEEEEETTTCEEEEEETTEECCCEECCTT---CCBCSSCEEEESSCCS T ss_pred CcEEEEEEcCCc-----eEEecCcccCCCEEEEEEEEECCCCcEEEEECCeEccCcccCCC---cEECCCCeEEEccccc Confidence 235565533321 12455677899999999999976 8999999999887544321 1234567899998631 Q ss_pred c------cCCccccceeeeEEeeCcccc Q FBpp0290336 207 I------IGGKFEGYLEKINVYGNPDAI 228 (1017) Q Consensus 207 ~------~~~~F~G~LQ~L~i~~dp~~a 228 (1017) . ....|.|.|.+|+|+.....+ T Consensus 145 ~~gg~~~~~~~f~G~idevri~~~aLs~ 172 (210) T 4pbp_A 145 SYVGSFDVDQSFVGEIANLQMWDYVLSS 172 (210) T ss_dssp BTTBCCCGGGCCCEEEEEEEEESSCCCH T ss_pred cCCCccCccccceEEecceEEecccCCH Confidence 1 235799999999999987544No 14>1pz7_A Agrin; structural protein; 1.42A {Gallus gallus} SCOP: b.29.1.4 PDB: 1pz8_A 1pz9_A 1q56_A Probab=98.77 E-value=9.8e-08 Score=99.67 Aligned_cols=126 Identities=13% Similarity=0.178 Sum_probs=87.2 Q ss_pred ceEEEEEEeecCCCCceEEEEEeCCCCeeEEEEEEcccccCceeEEEEEEecccccceeEeEeecccCCCCeeEEEEEEe Q FBpp0290336 87 EFAILITFRQSSLKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLASFGVAHVPDKWNSIALQVL 166 (1017) Q Consensus 87 eFSll~TlR~~~~~~g~LfsI~~~~~~~~qlgL~ls~~~~~~~~i~l~Y~~~~~~~~q~~~sF~v~l~Dg~WHrlaLsV~ 166 (1017) +|+|.+.||... ..+.||...+..+...+|.|+|..- .|.|.|...++. ..+.....+.|++||+|+|... T Consensus 49 ~~~is~~frT~~-~~GlLl~~~~~~~~~d~~~l~l~~G-----~l~~~~~~g~g~---~~l~s~~~v~Dg~WH~V~v~~~ 119 (204) T 1pz7_A 49 SNHFELSIKTEA-TQGLILWSGKGLERSDYIALAIVDG-----FVQMMYDLGSKP---VVLRSTVPINTNHWTHIKAYRV 119 (204) T ss_dssp EEEEEEEEEECC-SSEEEEEESCCSTTCCEEEEEEETT-----EEEEEEESSSCC---EEEEEEEECCSSSCEEEEEEEE T ss_pred ceEEEEEEEeCC-CCeEEEEecCCCCCCceEEEEEECC-----EEEEEEECCCCe---EEEECCccccCCCcEEEEEEEE Confidence 789999999764 4567776655323567888888654 377777543322 2233467788999999999999 Q ss_pred CCeEEEEEcCccceeecccCCCcccccCCCeeEEEEecccc---------cCCccccceeeeEEee Q FBpp0290336 167 SDKVSFYYDCELRNTTLVTREPIELVFDSASTLYIGQAGSI---------IGGKFEGYLEKINVYG 223 (1017) Q Consensus 167 g~~VtLyVDC~~~~t~~l~r~~~~l~~~~~~~l~IGq~g~~---------~~~~F~G~LQ~L~i~~ 223 (1017) +..++||||+....+...+.....+ +....||||..... ....|.|-|++|+|.. T Consensus 120 ~~~~~L~VD~~~~~~~~~~~~~~~l--~~~~~l~lGG~~~~~~~~~~~~~~~~~F~GCi~~v~in~ 183 (204) T 1pz7_A 120 QREGSLQVGNEAPITGSSPLGATQL--DTDGALWLGGMERLSVAHKLPKAYSTGFIGCIRDVIVDR 183 (204) T ss_dssp TTEEEEEETTSCCEEEECCSSCCCE--EECCEEEESSCSCCSTTTTSCGGGGSBCEEEEEEEEETT T ss_pred eCEEEEEECCeeeEeeecCCCccee--cCCCCEEECCCCccccccccccccCCCCeEEEeEEEECC Confidence 9999999999887654443322223 33568999875211 1246999999999943No 15>3flp_A SAP-like pentraxin; physiological doubly-stacked heptamer, pentraxin fold, cyclic heptamer, invertebrate lectin, sugar binding protein; 2.30A {Limulus polyphemus} PDB: 3flr_A 3flt_A Probab=98.69 E-value=3.3e-07 Score=95.83 Aligned_cols=160 Identities=15% Similarity=0.176 Sum_probs=104.2 Q ss_pred CcceEEcCC---CccCCCcccccCCcCCceEEEEEEeecCCCCceEEEEEeCCCCeeEEEEEEcccccCceeEEEEEEec Q FBpp0290336 62 FPAFRFLQT---ADVKSPYRMLLPEKLYEFAILITFRQSSLKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQA 138 (1017) Q Consensus 62 ~pAy~f~~~---a~l~~pt~~~fP~~~~eFSll~TlR~~~~~~g~LfsI~~~~~~~~qlgL~ls~~~~~~~~i~l~Y~~~ 138 (1017) ..|+.|... +.+..+....|+ ...+|+|.+++|+.......||+..+. .....|.|.+.........+.|+. . T Consensus 6 ~~al~F~G~s~~~yv~~~~~~~l~-~~~~fTi~~Wvk~~~~~~~~i~s~~~~-~~~~~~~l~~~~~~~~~~~~~~~~--~ 81 (217) T 3flp_A 6 DVKISFPGTQNPKFPHLRFMQTLP-AVRQLTVCQRIKPFHRNTGYIFSCATS-NQDNQFITSMYVKSDGTLNLGLQV--N 81 (217) T ss_dssp GEEEEECCCBTTBCCEEEESSCBC-CBSEEEEEEEEEESCSSCEEEEEEEET-TEEEEEEEEEEECTTSEEEEEEEE--T T ss_pred CeEEECCCCCccCeEEeccCCCCC-CcCeEEEEEEEEeCCCCCcEEEEEECC-CCCCeEEEEEccCCCcceEEEEEE--C Confidence 467888654 445555543343 123999999999877556679998875 334566666654322222344443 2 Q ss_pred ccccceeEeEeecccCCCCeeEEEEEEeCC--eEEEEEcCccceeec-ccCCCcccccCCCeeEEEEecccc------cC Q FBpp0290336 139 DQNIGRKLASFGVAHVPDKWNSIALQVLSD--KVSFYYDCELRNTTL-VTREPIELVFDSASTLYIGQAGSI------IG 209 (1017) Q Consensus 139 ~~~~~q~~~sF~v~l~Dg~WHrlaLsV~g~--~VtLyVDC~~~~t~~-l~r~~~~l~~~~~~~l~IGq~g~~------~~ 209 (1017) +.. ...+.....+.+++||+|++...+. .++||||.+++.+.. +.. ...+.....++||+.... .. T Consensus 82 g~~--~~~~~~~~~~~~~~W~hva~t~d~~~g~~~lYvnG~~~~~~~~~~~---~~~~~~~~~l~iG~~~~~~gg~~~~~ 156 (217) T 3flp_A 82 ASS--NKYISCPIEIELGQWYHVCHVWSGVDGRMAVYANGSPCGTMENVGK---GHQISAGGTVVIGQEQDKIGGGFEEQ 156 (217) T ss_dssp TCC--CEEEEEEEECCTTSCEEEEEEEETTTTEEEEEETTEEEEEESCSST---TCCBCSCBEEEESSCCSBTTBCCCGG T ss_pred Ccc--ceEEecCCccCCCCEEEEEEEEECCCCeEEEEECCEEcccccccCc---CcEeCCCCeEEECcccccCCCCcCcC Confidence 321 1223345677899999999999986 899999999987732 221 112345678999986321 23 Q ss_pred CccccceeeeEEeeCcccccc Q FBpp0290336 210 GKFEGYLEKINVYGNPDAINV 230 (1017) Q Consensus 210 ~~F~G~LQ~L~i~~dp~~a~~ 230 (1017) ..|.|.|.+|+|+..+..+.+ T Consensus 157 ~~f~G~idevri~~~aLs~~e 177 (217) T 3flp_A 157 ESWSGELSDLQVWDEALTTHQ 177 (217) T ss_dssp GCCCEEEEEEEEESSCCCHHH T ss_pred CCceEEeeeEEEECccCCHHH Confidence 579999999999998755433No 16>2h0b_A Neurexin-1-alpha; B-sandwich, cell adhesion; 2.10A {Bos taurus} SCOP: b.29.1.4 Probab=98.65 E-value=4e-07 Score=93.25 Aligned_cols=127 Identities=18% Similarity=0.258 Sum_probs=87.1 Q ss_pred ceEEEEEEeecCCCCceEEEEEeCCCCeeEEEEEEcccccCceeEEEEEEecccccceeEeEe-ecccCCCCeeEEEEEE Q FBpp0290336 87 EFAILITFRQSSLKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLASF-GVAHVPDKWNSIALQV 165 (1017) Q Consensus 87 eFSll~TlR~~~~~~g~LfsI~~~~~~~~qlgL~ls~~~~~~~~i~l~Y~~~~~~~~q~~~sF-~v~l~Dg~WHrlaLsV 165 (1017) +|+|.++||... ..++||..- +...+|.|+|..- .|.|.|....+.. ...+.. ...+.|++||+|+|.. T Consensus 29 ~~~i~l~frT~~-~~GlLl~~~---~~~d~~~l~l~~G-----~l~~~~~~g~g~~-~~~~~~~~~~l~Dg~WH~V~v~~ 98 (184) T 2h0b_A 29 SDEITLSFKTLQ-RNGLMLHTG---KSADYVNLALKNG-----AVSLVINLGSGAF-EALVEPVNGKFNDNAWHDVKVTR 98 (184) T ss_dssp EEEEEEEEEESC-SCEEEEEEC---CTTEEEEEEEETT-----EEEEEEEESSCEE-EEEECCSSSCSSSSSCEEEEEEE T ss_pred ccEEEEEEEeCC-CCEEEEEec---CCCCEEEEEEECC-----EEEEEEECCCCeE-EEEEccCCCcccCCCeEEEEEEE Confidence 789999999765 456887652 4567888888654 3777776543211 111212 4678899999999999 Q ss_pred eCCeEEEEEcCccceeecccCCCcccccCCCeeEEEEecccc-------cCCccccceeeeEEeeCc Q FBpp0290336 166 LSDKVSFYYDCELRNTTLVTREPIELVFDSASTLYIGQAGSI-------IGGKFEGYLEKINVYGNP 225 (1017) Q Consensus 166 ~g~~VtLyVDC~~~~t~~l~r~~~~l~~~~~~~l~IGq~g~~-------~~~~F~G~LQ~L~i~~dp 225 (1017) .+..++||||+....+...+.....+ +....||||..... ....|.|-|++|+|...+ T Consensus 99 ~~~~~~L~VD~~~~~~~~~~~~~~~l--~~~~~l~iGG~~~~~~~~~~~~~~~F~GCi~~v~i~~~~ 163 (184) T 2h0b_A 99 NLRQVTISVDGILTTTGYTQEDYTML--GSDDFFYVGGSPSTADLPGSPVSNNFMGCLKEVVYKNND 163 (184) T ss_dssp ETTEEEEEETTTEEEEEECSTTCCCE--EECSEEEESCCTTGGGSTTCSCCCBCEEEEEEEEEEESS T ss_pred eCCEEEEEECCeeeeeeeCCCCceee--cCCCCEEECCCCccccccCCcccCCCEEEeeEEEECCEE Confidence 99999999999987654443222222 23467999876221 124699999999997654No 17>4avs_A Serum amyloid P-component; sugar binding protein, glycoprotein, disulfide bond, lectin, metal-binding; HET: NAG N7P; 1.40A {Homo sapiens} SCOP: b.29.1.5 PDB: 1lgn_A* 1gyk_A 2a3w_A* 2a3x_A* 2a3y_A* 1sac_A* 3d5o_A* 2w08_A* 3kqr_A* 4avt_A* 4avv_A* 4ayu_A* Probab=98.61 E-value=6.2e-07 Score=93.08 Aligned_cols=150 Identities=15% Similarity=0.074 Sum_probs=99.0 Q ss_pred CcceEEcCCC---ccCCCcccccCCcCCceEEEEEEeecCCCCceEEEEEeCCCCeeEEEEEEcccccCceeEEEEEEec Q FBpp0290336 62 FPAFRFLQTA---DVKSPYRMLLPEKLYEFAILITFRQSSLKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQA 138 (1017) Q Consensus 62 ~pAy~f~~~a---~l~~pt~~~fP~~~~eFSll~TlR~~~~~~g~LfsI~~~~~~~~qlgL~ls~~~~~~~~i~l~Y~~~ 138 (1017) ..|+.|.... .+..+.. ++....+|||.+++|+.......||+..+. .....|.|.++.. ..+.|+. . T Consensus 6 G~al~F~g~~~~~yv~~~~~--~~~~~~~fTi~~Wvk~~~~~~~~i~s~~~~-~~~~~~~l~~~~~----~~~~~~~--~ 76 (204) T 4avs_A 6 GKVFVFPRESVTDHVNLITP--LEKPLQNFTLCFRAYSDLSRAYSLFSYNTQ-GRDNELLVYKERV----GEYSLYI--G 76 (204) T ss_dssp TEEEEECSCCSSCEEEECCC--CCSCBSEEEEEEEEECCCCSCEEEEEEEET-TEEEEEEEEEEET----TEEEEEE--T T ss_pred ccEEECCCCCCCCeEEEecC--CCCCccCEEEEEEEEcCCCCCcEEEEEEcC-CCCceEEEEEeCC----CeEEEEE--C Confidence 3567775542 2333321 221223999999999877677789998775 3344566655332 2355554 2 Q ss_pred ccccceeEeEeecccCCCCeeEEEEEEeCC--eEEEEEcCccceeecccCCCcccccCCCeeEEEEecccc------cCC Q FBpp0290336 139 DQNIGRKLASFGVAHVPDKWNSIALQVLSD--KVSFYYDCELRNTTLVTREPIELVFDSASTLYIGQAGSI------IGG 210 (1017) Q Consensus 139 ~~~~~q~~~sF~v~l~Dg~WHrlaLsV~g~--~VtLyVDC~~~~t~~l~r~~~~l~~~~~~~l~IGq~g~~------~~~ 210 (1017) + ..+.+...+.+++||+|++...+. .++||||.+++.+..+... ..+.....++||+.... ... T Consensus 77 ~-----~~~~~~~~~~~~~W~Hva~t~d~~~g~~~lYvnG~~~~~~~~~~~---~~~~~~~~l~iG~~~~~~gg~~~~~~ 148 (204) T 4avs_A 77 R-----HKVTSKVIEKFPAPVHICVSWESSSGIAEFWINGTPLVKKGLRQG---YFVEAQPKIVLGQEQDSYGGKFDRSQ 148 (204) T ss_dssp T-----EEEEEECCCCSSCCEEEEEEEETTTCEEEEEETTEECCCEECCTT---CCBCSSCEEEESSCCSSSSCCCCGGG T ss_pred C-----EEEEecccccCCCEEEEEEEEECCCCeEEEEECCeEecccccCCC---ceECCCceEEEcccccccCccccCCc Confidence 2 123455677899999999999976 8999999999887544321 12345678999986311 135 Q ss_pred ccccceeeeEEeeCcccc Q FBpp0290336 211 KFEGYLEKINVYGNPDAI 228 (1017) Q Consensus 211 ~F~G~LQ~L~i~~dp~~a 228 (1017) .|.|.|.+|+|+..+..+ T Consensus 149 ~f~G~idevri~~~aLs~ 166 (204) T 4avs_A 149 SFVGEIGDLYMWDSVLPP 166 (204) T ss_dssp CCCEEEEEEEEESSCCCH T ss_pred cceEEeceeEEECccCCH Confidence 799999999999987544No 18>2r16_A Neurexin-1-alpha; beta-sandwich, cell adhesion, splicing; 1.04A {Bos taurus} Probab=98.61 E-value=6e-07 Score=92.11 Aligned_cols=125 Identities=16% Similarity=0.227 Sum_probs=88.1 Q ss_pred ceEEEEEEeecCCCCceEEEEEeCCCCeeEEEEEEcccccCceeEEEEEEecccccceeEeEeecccCCCCeeEEEEEEe Q FBpp0290336 87 EFAILITFRQSSLKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLASFGVAHVPDKWNSIALQVL 166 (1017) Q Consensus 87 eFSll~TlR~~~~~~g~LfsI~~~~~~~~qlgL~ls~~~~~~~~i~l~Y~~~~~~~~q~~~sF~v~l~Dg~WHrlaLsV~ 166 (1017) .|+|.+.||... ..+.||.+.+. +...+|.|+|..- .|.|.|....+. ..+.....+.|++||+|.|... T Consensus 28 ~~~isl~frT~~-~~GlLl~~~~~-~~~d~l~l~L~~G-----~l~~~~~~g~~~---~~~~~~~~l~Dg~WH~V~v~~~ 97 (182) T 2r16_A 28 AEDVSLRFRSQR-AYGILMATTSR-DSADTLRLELDAG-----RVKLTVNLGKGP---ETLFAGYNLNDNEWHTVRVVRR 97 (182) T ss_dssp EEEEEEEEECSC-SSEEEEEEECS-SSCCEEEEEEETT-----EEEEEEESSSCC---EEEEECSSCCSSSCEEEEEEEE T ss_pred ccEEEEEEEeCC-CCEEEEEcCCC-CCCCEEEEEEECC-----EEEEEEEcCCcc---eEeccCCcccCCCcEEEEEEEE Confidence 789999999764 56799988874 4467888888654 377777643322 2233467888999999999999 Q ss_pred CCeEEEEEcCccceeecccCCCcccccCCCeeEEEEeccc-----ccCCccccceeeeEEeeC Q FBpp0290336 167 SDKVSFYYDCELRNTTLVTREPIELVFDSASTLYIGQAGS-----IIGGKFEGYLEKINVYGN 224 (1017) Q Consensus 167 g~~VtLyVDC~~~~t~~l~r~~~~l~~~~~~~l~IGq~g~-----~~~~~F~G~LQ~L~i~~d 224 (1017) +..++|+||+....+...+.....+.++ .||||-... .....|+|-|++|+|... T Consensus 98 ~~~~~L~VD~~~~~~~~~~~~~~~l~~~---~l~~Gg~~~~~~~~~~~~~F~GCi~~v~in~~ 157 (182) T 2r16_A 98 GKSLKLTVDDQQAMTGQMAGDHTRLEFH---NIETGIITERRYLSSVPSNFIGHLQSLTFNGM 157 (182) T ss_dssp TTEEEEEETTCCEEEEECCSSCCCEEEE---EEEESSCCCCTTCSSCCCCCEEEEEEEEETTE T ss_pred CCEEEEEEeCCceeeEEcCCCCcEEEec---ceEEcCcccccccCCCCCCCEEEEeEEEECCE Confidence 9999999999987665554433344332 288875411 122469999999998544No 19>3bod_A Neurexin-1-alpha; neurexin1D, LNS6, alternative splicing, calcium, cell adhesion, EGF-like domain, glycoprotein, membrane, metal- binding; 1.70A {Mus musculus} SCOP: b.29.1.4 PDB: 3vkf_C* 2xb6_C* 2wqz_C* 1c4r_A 3bop_A 3mw4_A* Probab=98.59 E-value=9.1e-07 Score=90.65 Aligned_cols=125 Identities=16% Similarity=0.158 Sum_probs=87.1 Q ss_pred ceEEEEEEeecCCCCceEEEEEeCCCCeeEEEEEEcccccCceeEEEEEEecccccceeEe-EeecccCCCCeeEEEEEE Q FBpp0290336 87 EFAILITFRQSSLKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLA-SFGVAHVPDKWNSIALQV 165 (1017) Q Consensus 87 eFSll~TlR~~~~~~g~LfsI~~~~~~~~qlgL~ls~~~~~~~~i~l~Y~~~~~~~~q~~~-sF~v~l~Dg~WHrlaLsV 165 (1017) .|+|.+.||... ..+.||.+.+..+...+|.|+|..- .|.|.|....+. ... .....+.|++||+|.|.. T Consensus 30 ~~~isl~frT~~-~~GlLl~~~~~~~~~d~l~l~L~~G-----~l~~~~~~g~~~---~~~~~~~~~l~Dg~WH~V~v~r 100 (178) T 3bod_A 30 ADRLAIGFSTVQ-KEAVLVRVDSSSGLGDYLELHIHQG-----KIGVKFNVGTDD---IAIEESNAIINDGKYHVVRFTR 100 (178) T ss_dssp EEEEEEEEECCC-SSEEEEEEEESSSSCCEEEEEEETT-----EEEEEEESSSCC---EEEECCSSCCCSSSCEEEEEEE T ss_pred CCEEEEEEEECC-CCEEEEEEcCCCCCCCEEEEEEECC-----EEEEEEEcCCCc---EEEecCCcccCCCCcEEEEEEE Confidence 678888888654 4678888877433457888888654 377777644321 222 225678899999999999 Q ss_pred eCCeEEEEEcCcccee-ecccCCCcccccCCCeeEEEEecccccCCccccceeeeEEeeC Q FBpp0290336 166 LSDKVSFYYDCELRNT-TLVTREPIELVFDSASTLYIGQAGSIIGGKFEGYLEKINVYGN 224 (1017) Q Consensus 166 ~g~~VtLyVDC~~~~t-~~l~r~~~~l~~~~~~~l~IGq~g~~~~~~F~G~LQ~L~i~~d 224 (1017) .+..++|+|||....+ ...+..... ++....||||... ....|+|-|++|+|-.- T Consensus 101 ~~~~~~L~VD~~~~~~~~~~~~~~~~--l~~~~~l~iGG~~--~~~~F~GCi~~v~in~~ 156 (178) T 3bod_A 101 SGGNATLQVDSWPVIERYPAGRQLTI--FNSQATIIIGGKE--QGQPFQGQLSGLYYNGL 156 (178) T ss_dssp ETTEEEEEETTSCCEEECCCSCCCCC--BCCEEEEEESCCT--TSCBCCEEEEEEEETTE T ss_pred eCCEEEEEECCceeeeEecCCCcceE--ecCCCCEEEeCcc--CCCCCeEEEceEEECCe Confidence 9999999999987533 333332222 3345679998762 33679999999998543No 20>3pvn_A C-reactive protein; pentraxin family, immune system; 1.98A {Homo sapiens} SCOP: b.29.1.5 PDB: 1gnh_A 1lj7_A 3l2y_A 1b09_A 3pvo_A Probab=98.57 E-value=8.5e-07 Score=92.09 Aligned_cols=150 Identities=17% Similarity=0.157 Sum_probs=98.8 Q ss_pred CcceEEcCC---CccCCCcccccCCcCCceEEEEEEeecCC--CCceEEEEEeCCCCeeEEEEEEcccccCceeEEEEEE Q FBpp0290336 62 FPAFRFLQT---ADVKSPYRMLLPEKLYEFAILITFRQSSL--KGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYT 136 (1017) Q Consensus 62 ~pAy~f~~~---a~l~~pt~~~fP~~~~eFSll~TlR~~~~--~~g~LfsI~~~~~~~~qlgL~ls~~~~~~~~i~l~Y~ 136 (1017) ..|+.|... ..+..+... +....+|+|.+++|+... ....||+..+. .....|.|.++.. ..+.|+. T Consensus 6 g~al~F~g~s~~~yv~~~~~~--~~~~~~fTi~~Wvk~~~~~~~~~~i~s~~~~-~~~~~~~l~~~~~----~~~~~~~- 77 (206) T 3pvn_A 6 RKAFVFPKESDTSYVSLKAPL--TKPLKAFTVCLHFYTELSSTRGYSIFSYATK-RQDNEILIFWSKD----IGYSFTV- 77 (206) T ss_dssp TEEEEECSCCSSCEEEECCCC--CSCBSEEEEEEEEEESGGGTCCEEEEEEEET-TEEEEEEEEEETT----TEEEEEE- T ss_pred CCEEECCCCCccCeEEEcCCC--CCChhcEEEEEEEEeCCCCCCCcEEEEEECC-CCCCEEEEEEeCC----CEEEEEE- Confidence 457777654 223333221 111229999999999764 66789998775 3344566655432 2355544 Q ss_pred ecccccceeEeEeecccCCCCeeEEEEEEeCC--eEEEEEcCccceeecccCCCcccccCCCeeEEEEeccc------cc Q FBpp0290336 137 QADQNIGRKLASFGVAHVPDKWNSIALQVLSD--KVSFYYDCELRNTTLVTREPIELVFDSASTLYIGQAGS------II 208 (1017) Q Consensus 137 ~~~~~~~q~~~sF~v~l~Dg~WHrlaLsV~g~--~VtLyVDC~~~~t~~l~r~~~~l~~~~~~~l~IGq~g~------~~ 208 (1017) .+ ....+...+.+++||+|++...+. .++||||.+++.+..+... ..+.....++||+... .. T Consensus 78 -~~-----~~~~~~~~~~~~~W~hva~t~d~~~g~~~lYvnG~~~~~~~~~~~---~~~~~~~~l~iG~~~~~~gg~~~~ 148 (206) T 3pvn_A 78 -GG-----SEILFEVPEVTVAPVHICTSWESASGIVEFWVDGKPRVRKSLKKG---YTVGAEASIILGQEQDSFGGNFEG 148 (206) T ss_dssp -TT-----EEEEEECSSCCSSCEEEEEEEETTTCEEEEEETTEECCCEECCTT---CCBCSSCEEEESSCCSBTTBCCCG T ss_pred -CC-----eeeEeecccCCCCcEEEEEEEECCCceEEEEECCcCcccccccCC---ceECCCCEEEEeeccccCCCCccc Confidence 22 123445677899999999999975 8999999999887544321 1234567899998631 12 Q ss_pred CCccccceeeeEEeeCcccc Q FBpp0290336 209 GGKFEGYLEKINVYGNPDAI 228 (1017) Q Consensus 209 ~~~F~G~LQ~L~i~~dp~~a 228 (1017) ...|.|.|.+|+|+...... T Consensus 149 ~~~f~G~idevri~~~aLs~ 168 (206) T 3pvn_A 149 SQSLVGDIGNVNMWDFVLSP 168 (206) T ss_dssp GGCCCEEEEEEEEESSCCCH T ss_pred ccceEEEecceEEEcccCCH Confidence 35799999999999987544No 21>4c1w_A Neuraminidase; sugar binding protein, carbohydrate-binding module, sialic A binding; HET: SLT; 1.84A {Streptococcus pneumoniae} PDB: 4c1x_A* Probab=98.39 E-value=4.2e-06 Score=85.99 Aligned_cols=136 Identities=16% Similarity=0.158 Sum_probs=88.1 Q ss_pred ceEEEEEEeecC--CCCceEEEEEeCCCCeeEEEEEEcccccCceeEEEEEEecccccc-eeEeEeecccCCCCeeEEEE Q FBpp0290336 87 EFAILITFRQSS--LKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIG-RKLASFGVAHVPDKWNSIAL 163 (1017) Q Consensus 87 eFSll~TlR~~~--~~~g~LfsI~~~~~~~~qlgL~ls~~~~~~~~i~l~Y~~~~~~~~-q~~~sF~v~l~Dg~WHrlaL 163 (1017) +|+|.+++|+.. .....||++.+......+|.|.+... . ..|.+....+... ...+.-...+.+++||||++ T Consensus 34 ~fTv~~Wvk~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~---~--~~~~~~~~~g~~~~~~~~~~~~~~~~g~W~Hva~ 108 (188) T 4c1w_A 34 NATVHMEFKPDAKAPAFYNLFSVSSATKKDEYFTMAVYNN---T--ATLEGRGSDGKQFYNNYNDAPLKVKPGQWNSVTF 108 (188) T ss_dssp SEEEEEEEEECSSCCSEEEEEEEECSSCTTCEEEEEEETT---E--EEEEEECTTCCBSSCCCTTCSCBCCTTSCEEEEE T ss_pred CeEEEEEEECCCCCCCccEEEEccCCcccCceEEEEEeCC---c--cEEEEEECCCCeEeccccccccccCCCCEEEEEE Confidence 999999999976 44457999887543346777777654 1 2344443222110 00011134566999999999 Q ss_pred EEeC-------CeEEEEEcCccceeecccCCCcccccCCCeeEEEEeccccc--CCccccceeeeEEeeCcccc Q FBpp0290336 164 QVLS-------DKVSFYYDCELRNTTLVTREPIELVFDSASTLYIGQAGSII--GGKFEGYLEKINVYGNPDAI 228 (1017) Q Consensus 164 sV~g-------~~VtLyVDC~~~~t~~l~r~~~~l~~~~~~~l~IGq~g~~~--~~~F~G~LQ~L~i~~dp~~a 228 (1017) ...+ ..++||||.+++.+......+. ..+.....++||+..... ...|.|.|.+|+|+..+..+ T Consensus 109 t~d~~~~~~~~~~~~lYvnG~~~~~~~~~~~~~-~~~~~~~~~~iG~~~~~g~~~~~f~G~idevriy~~aLs~ 181 (188) T 4c1w_A 109 TVEKPTAELPKGRVRLYVNGVLSRTSLRSGNFI-KDMPDVTHVQIGATKRANNTVWGSNLQIRNLTVYNRALTP 181 (188) T ss_dssp EEECCCSSSTTCEEEEEETTEEEEEECSCCCCG-GGCTTCCEEEEESEEETTEEECCCCEEEEEEEEESSCCCH T ss_pred EEeCCcccCCCceEEEEECCEEeeeeeccCCcc-ccCCCCccEEECccccCCCcccccccEEeeEEEECCcCCH Confidence 9999 8999999999988743221111 112235689999862111 13599999999999876544No 22>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus} Probab=98.36 E-value=3.8e-06 Score=97.13 Aligned_cols=127 Identities=15% Similarity=0.144 Sum_probs=87.2 Q ss_pred ceEEEEEEeecCCCCceEEEEEeCCCCeeEEEEEEcccccCceeEEEEEEecccccceeEeEe-ecccCCCCeeEEEEEE Q FBpp0290336 87 EFAILITFRQSSLKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLASF-GVAHVPDKWNSIALQV 165 (1017) Q Consensus 87 eFSll~TlR~~~~~~g~LfsI~~~~~~~~qlgL~ls~~~~~~~~i~l~Y~~~~~~~~q~~~sF-~v~l~Dg~WHrlaLsV 165 (1017) .+.|.+.||.. ...++||.+.+......+|.|.|..- .|.|.|...... ..+.+ ...+.||+||+|.|.+ T Consensus 250 ~~~isl~frT~-~~~GlLl~~~~~~~~~~~l~l~l~~G-----~l~~~~~~g~~~---~~~~~~~~~l~DG~WH~V~v~~ 320 (410) T 3asi_A 250 ADRLAIGFSTV-QKEAVLVRVDSSSGLGDYLELHIHQG-----KIGVKFNVGTDD---IAIEESNAIINDGKYHVVRFTR 320 (410) T ss_dssp EEEEEEEEECC-CSEEEEEEEEECTTCCCEEEEEEETT-----EEEEEEESSSSC---EEEECCSCCCCSSSCEEEEEEE T ss_pred ccEEEEEEEec-CCCeEEEEEecCCCCCcEEEEEEeCC-----EEEEEEECCCCC---eEEccCCcCCCCCCeEEEEEEE Confidence 45666777754 45678998877543467888888743 367777543321 22333 5678899999999999 Q ss_pred eCCeEEEEEcCccceeecccCCCcccccCCCeeEEEEecccccCCccccceeeeEEeeCc Q FBpp0290336 166 LSDKVSFYYDCELRNTTLVTREPIELVFDSASTLYIGQAGSIIGGKFEGYLEKINVYGNP 225 (1017) Q Consensus 166 ~g~~VtLyVDC~~~~t~~l~r~~~~l~~~~~~~l~IGq~g~~~~~~F~G~LQ~L~i~~dp 225 (1017) .+..++|+|||....+....... ...+.....||||.. .....|+|-|++|+|-..+ T Consensus 321 ~~~~~~L~VD~~~~~~~~~~~~~-~~~l~~~~~l~lGg~--~~~~~F~Gci~~v~in~~~ 377 (410) T 3asi_A 321 SGGNATLQVDSWPVIERYPAGRQ-LTIFNSQATIIIGGK--EQGQPFQGQLSGLYYNGLK 377 (410) T ss_dssp ETTEEEEEETTSCCEEECCSSCC-CCCBCCEEEEEESST--TTTCCCCEEEEEEEETTBC T ss_pred ECCEEEEEECCccceeecCCCcc-cEEecCCceEEEcCC--cCCCCCEEEEEEEEECCHH Confidence 99999999999887653222111 112345678999976 2346799999999996543No 23>2v73_A CBM40, putative EXO-alpha-sialidase; carbohydrate-binding module, bacterial pathogen, sialic acid, sugar-binding protein; HET: SIA; 2.2A {Clostridium perfringens} Probab=98.35 E-value=1.3e-05 Score=83.42 Aligned_cols=135 Identities=16% Similarity=0.147 Sum_probs=88.9 Q ss_pred CceEEEEEEeecCCCCceEEEEEeCCCCeeEEEEEEcccccCceeEEEEEEeccccccee-EeEeecccCCCCeeEEEEE Q FBpp0290336 86 YEFAILITFRQSSLKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRK-LASFGVAHVPDKWNSIALQ 164 (1017) Q Consensus 86 ~eFSll~TlR~~~~~~g~LfsI~~~~~~~~qlgL~ls~~~~~~~~i~l~Y~~~~~~~~q~-~~sF~v~l~Dg~WHrlaLs 164 (1017) .+|||.++||+.......||++.+......+|.|.+... ++.|............ .....+.+.+ +||+|++. T Consensus 40 ~~fTvs~Wvk~~~~~~~~lfs~~~~~~~~~~~~l~~~~g-----~l~~~~~~~~~~~~~~~~~~~~~~~~~-~W~Hva~t 113 (191) T 2v73_A 40 EEGTIVTRFNMNDTSIQSLIGLSDGNKANNYFSLYVSGG-----KVGYELRRQEGNGDFNVHHSADVTFNR-GINTLALK 113 (191) T ss_dssp SSEEEEEEEEECCCSCEEEEEEECTTCSSCEEEEEECSS-----EEEEEEEECTTSSCEEEEEEEECCCCS-SCEEEEEE T ss_pred CCEEEEEEEEeCCCCceEEEEecCCCCcCcEEEEEEECC-----EEEEEEEecCCCcceeeecccccccCC-ceEEEEEE Confidence 399999999998755557999987654445677777632 3666665543211111 1112333335 99999999 Q ss_pred EeC-CeEEEEEcCccceeecccC-CCcccccCCCeeEEEEecccc---cCCccccceeeeEEeeCcccc Q FBpp0290336 165 VLS-DKVSFYYDCELRNTTLVTR-EPIELVFDSASTLYIGQAGSI---IGGKFEGYLEKINVYGNPDAI 228 (1017) Q Consensus 165 V~g-~~VtLyVDC~~~~t~~l~r-~~~~l~~~~~~~l~IGq~g~~---~~~~F~G~LQ~L~i~~dp~~a 228 (1017) ..+ ..++||||-+++.+..... .... .+ ....++||+.... ....|.|.|.+|+|+.....+ T Consensus 114 ~d~~~~~~lYvnG~~~~~~~~~~~~~~~-~~-~~~~~~iG~~~~~~g~~~~~f~G~Idevri~~~aLs~ 180 (191) T 2v73_A 114 IEKGIGAKIFLNGSLVKTVSDPNIKFLN-AI-NLNSGFIGKTDRANGYNEYLFRGNIDFMNIYDKPVSD 180 (191) T ss_dssp EETTTEEEEEETTEEEEEEECTTCCCGG-GS-CCCEEEESSCCCCSSSCCCCCCEEEEEEEEESSCCCH T ss_pred EeCCCcEEEEECCEEeeeeccCCccccc-cc-CCceEEECCCCCCCCccCcCCceEEeEEEEECCcCCH Confidence 998 7899999999987765432 1110 11 3458999986321 134699999999999876544No 24>1d2s_A SHBG, sex hormone-binding globulin; steroid transport, laminin G-like domain, jellyroll, androgen binding protein (ABP); HET: DHT; 1.55A {Homo sapiens} SCOP: b.29.1.4 PDB: 1kdk_A* 1kdm_A* Probab=98.32 E-value=8.8e-06 Score=82.68 Aligned_cols=123 Identities=11% Similarity=0.023 Sum_probs=84.3 Q ss_pred ceEEEEEEeecCCCCceEEEEEeCCCCeeEEEEEEcccccCceeEEEEEEecccccceeEeEeecccCCCCeeEEEEEEe Q FBpp0290336 87 EFAILITFRQSSLKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLASFGVAHVPDKWNSIALQVL 166 (1017) Q Consensus 87 eFSll~TlR~~~~~~g~LfsI~~~~~~~~qlgL~ls~~~~~~~~i~l~Y~~~~~~~~q~~~sF~v~l~Dg~WHrlaLsV~ 166 (1017) +|+|.+.||... ..+.||...+. +...+|.|+|..- .|.|.|..... ...+.....+.|++||+|.|... T Consensus 27 ~~~isl~frT~~-~~GlLl~~~~~-~~~d~l~l~L~~G-----~l~~~~~~g~~---~~~~~~~~~v~DG~WH~V~v~~~ 96 (170) T 1d2s_A 27 KTSSSFEVRTWD-PEGVIFYGDTN-PKDDWFMLGLRDG-----RPEIQLHNHWA---QLTVGAGPRLDDGRWHQVEVKME 96 (170) T ss_dssp CCEEEEEEEESC-SSEEEEEEEEE-TTTEEEEEEEETT-----EEEEEEESSSC---EEEEECSCCCCSSSCEEEEEEEE T ss_pred CcEEEEEEEECC-CCEEEEEeCCC-CCCCEEEEEEECC-----EEEEEEECCCc---cEEeeCCCccCCCCCEEEEEEEe Confidence 788888999764 45788887764 3457888888654 36777754331 12222356788999999999999 Q ss_pred CCeEEEEEcCccceeecccCCCcccccCCCeeEEEEeccc-------ccCCccccceee-eEEeeCc Q FBpp0290336 167 SDKVSFYYDCELRNTTLVTREPIELVFDSASTLYIGQAGS-------IIGGKFEGYLEK-INVYGNP 225 (1017) Q Consensus 167 g~~VtLyVDC~~~~t~~l~r~~~~l~~~~~~~l~IGq~g~-------~~~~~F~G~LQ~-L~i~~dp 225 (1017) +..++|+||.+...+.... + .. ....||||-... .....|+|=|++ ++|-..+ T Consensus 97 ~~~~~L~VD~~~~~~~~~~--~-g~---~~~~lylGG~p~~~~~~~~~~~~~F~GCi~~~~~in~~~ 157 (170) T 1d2s_A 97 GDSVLLEVDGEEVLRLRQV--S-GH---PIMRIALGGLLFPASNLRLPLVPALDGCLRRDSWLDKQA 157 (170) T ss_dssp TTEEEEEETTEEEEEETTC--C-CC---CEEEEEESSCSSCGGGSSSCCCCCCCEEEEEEEESCGGG T ss_pred CCEEEEEECCeeeeeeccC--C-CC---cCCCEEECCccccccccccCCCCCeeEecccceecCCee Confidence 9999999999876553211 1 11 246799987521 112469999999 7765443No 25>1f5f_A SHBG, sex hormone-binding globulin; jellyroll, signaling protein; HET: DHT; 1.70A {Homo sapiens} SCOP: b.29.1.4 PDB: 1lhw_A* 1lho_A* 1lhn_A* 1lhv_A* 1lhu_A* Probab=98.22 E-value=2.3e-05 Score=82.14 Aligned_cols=128 Identities=11% Similarity=0.023 Sum_probs=85.0 Q ss_pred ceEEEEEEeecCCCCceEEEEEeCCCCeeEEEEEEcccccCceeEEEEEEecccccceeEeEeecccCCCCeeEEEEEEe Q FBpp0290336 87 EFAILITFRQSSLKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLASFGVAHVPDKWNSIALQVL 166 (1017) Q Consensus 87 eFSll~TlR~~~~~~g~LfsI~~~~~~~~qlgL~ls~~~~~~~~i~l~Y~~~~~~~~q~~~sF~v~l~Dg~WHrlaLsV~ 166 (1017) +|+|.+.||... ..+.||...+. +...+|.|+|..- .|.|.|..... ...+.-...+.|++||+|.|... T Consensus 39 ~~~is~~frT~~-~~GlLl~~~~~-~~~d~l~L~L~~G-----~l~~~~~~g~~---~~~~~s~~~vnDG~WH~V~l~~~ 108 (205) T 1f5f_A 39 KTSSSFEVRTWD-PEGVIFYGDTN-PKDDWFMLGLRDG-----RPEIQLHNHWA---QLTVGAGPRLDDGRWHQVEVKME 108 (205) T ss_dssp CCEEEEEEEESC-SSEEEEEEEEE-TTTEEEEEEEETT-----EEEEEEESSSC---EEEEECSCCCCSSSCEEEEEEEE T ss_pred CcEEEEEEEECC-CCEEEEEeCCC-CCCCEEEEEEeCC-----EEEEEEECCCc---eEEEecCCccCCCCCEEEEEEEe Confidence 888889999765 45788887764 3457888888654 36777754321 12222356788999999999999 Q ss_pred CCeEEEEEcCccceee-cccCCCcccccCCCeeEEEEeccc-------ccCCccccceee-eEEeeCc Q FBpp0290336 167 SDKVSFYYDCELRNTT-LVTREPIELVFDSASTLYIGQAGS-------IIGGKFEGYLEK-INVYGNP 225 (1017) Q Consensus 167 g~~VtLyVDC~~~~t~-~l~r~~~~l~~~~~~~l~IGq~g~-------~~~~~F~G~LQ~-L~i~~dp 225 (1017) +..++|+||.+...+. ......... ......||||-... .....|+|=|++ |+|-..+ T Consensus 109 ~~~~~L~VD~~~~~~~~~~~~~~~~~-~~~~~~lyvGG~p~~~~~~~~~~~~~F~GCi~~~v~in~~~ 175 (205) T 1f5f_A 109 GDSVLLEVDGEEVLRLRQVSGPLTSK-RHPIMRIALGGLLFPASNLRLPLVPALDGCLRRDSWLDKQA 175 (205) T ss_dssp TTEEEEEETTEEEEEECSCCCCC-----CCEEEEEESSCSSCGGGSSSCCCCCCCEEEEEEECSCGGG T ss_pred CCEEEEEECCccceeeecccCccccC-CCcCccEEECCccCcccccccCCCCCccEEecccEEECCeE Confidence 9999999999876542 222111111 11247899987521 112469999999 7776554No 26>2r1d_A Neurexin-1-beta, neurexin I-beta; beta-sandwich, cell adhesion, splicing; 2.60A {Rattus norvegicus} SCOP: b.29.1.4 PDB: 3biw_E* Probab=98.21 E-value=1.8e-05 Score=84.63 Aligned_cols=125 Identities=16% Similarity=0.158 Sum_probs=86.4 Q ss_pred ceEEEEEEeecCCCCceEEEEEeCCCCeeEEEEEEcccccCceeEEEEEEecccccceeEe-EeecccCCCCeeEEEEEE Q FBpp0290336 87 EFAILITFRQSSLKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLA-SFGVAHVPDKWNSIALQV 165 (1017) Q Consensus 87 eFSll~TlR~~~~~~g~LfsI~~~~~~~~qlgL~ls~~~~~~~~i~l~Y~~~~~~~~q~~~-sF~v~l~Dg~WHrlaLsV 165 (1017) .+.|.+.||... ..+.||.+.+..+...+|.|+|..- .|.|.|....+. ..+ .....+.|++||+|.|.. T Consensus 64 ~~~isl~FrT~~-~~GlLl~~~~~~~~~dfl~L~L~~G-----~l~~~~~~G~~~---~~l~~~~~~l~DG~WH~V~v~r 134 (226) T 2r1d_A 64 ADRLAIGFSTVQ-KEAVLVRVDSSSGLGDYLELHIHQG-----KIGVKFNVGTDD---IAIEESNAIINDGKYHVVRFTR 134 (226) T ss_dssp EEEEEEEEECCC-SSEEEEEEEECTTCCCEEEEEEETT-----EEEEEEESSSCE---EEEECCSSCCCSSSCEEEEEEE T ss_pred cCEEEEEEEECC-CCeEEEEecCCCCCCCEEEEEEECC-----EEEEEEECCCCe---EEEecCCcCccCCCcEEEEEEE Confidence 678888888654 5678888877423457888888654 377878654321 222 225678899999999999 Q ss_pred eCCeEEEEEcCcccee-ecccCCCcccccCCCeeEEEEecccccCCccccceeeeEEeeC Q FBpp0290336 166 LSDKVSFYYDCELRNT-TLVTREPIELVFDSASTLYIGQAGSIIGGKFEGYLEKINVYGN 224 (1017) Q Consensus 166 ~g~~VtLyVDC~~~~t-~~l~r~~~~l~~~~~~~l~IGq~g~~~~~~F~G~LQ~L~i~~d 224 (1017) .+..++|+||.....+ ...+..... ++....||||-.. ....|+|-|++|+|-.. T Consensus 135 ~~~~~~L~VD~~~~~~~~~~~~~~~~--l~~~~~l~lGG~p--~~~~F~GCi~~v~in~~ 190 (226) T 2r1d_A 135 SGGNATLQVDSWPVIERYPAGRQLTI--FNSQATIIIGGKE--QGQPFQGQLSGLYYNGL 190 (226) T ss_dssp ETTEEEEEETTSCCEEECCSSCCCCC--BCSEEEEEESSTT--TTCCCCEEEEEEEETTB T ss_pred cCCEEEEEECCeeeeeEecCCCcceE--EcCCCCEEEeccc--CCCCCEEEEeeEEECCE Confidence 9999999999986432 333332222 3345689998762 23679999999998543No 27>2jd4_A Laminin subunit alpha-1; basement membrane protein, metal binding protein; 1.9A {Mus musculus} SCOP: b.29.1.0 Probab=98.19 E-value=1.9e-05 Score=90.25 Aligned_cols=125 Identities=16% Similarity=0.302 Sum_probs=84.6 Q ss_pred ceEEEEEEeecCCCCceEEEEEeCCCCeeEEEEEEcccccCceeEEEEEEecccccceeEeEe----ecccCCCCeeEEE Q FBpp0290336 87 EFAILITFRQSSLKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLASF----GVAHVPDKWNSIA 162 (1017) Q Consensus 87 eFSll~TlR~~~~~~g~LfsI~~~~~~~~qlgL~ls~~~~~~~~i~l~Y~~~~~~~~q~~~sF----~v~l~Dg~WHrla 162 (1017) +|+|.+.||.. ...+.||.+.+. ...+|.|+|... .|.|.|....+ .....+ ...+.|++||+|. T Consensus 221 ~~~isl~frT~-~~~GlLl~~~~~--~~d~l~l~L~~G-----~l~~~~~~g~g---~~~~~~~~~~~~~l~DG~WH~V~ 289 (383) T 2jd4_A 221 DLQITLEFRTT-SKNGVLLGISSA--KVDAIGLEIVDG-----KVLFHVNNGAG---RITATYQPRAARALCDGKWHTLQ 289 (383) T ss_dssp CEEEEEEEEES-CSCEEEEEEECS--SSCEEEEEEETT-----EEEEEEESSSC---EEEEEECCSSTTGGGSSSCEEEE T ss_pred ceEEEEEEEeC-CCCEEEEEecCC--CCCEEEEEEECC-----EEEEEEECCCC---cEEEEEecCCCccccCCCcEEEE Confidence 88999999965 556789988763 346888888654 37777754322 122233 3577899999999 Q ss_pred EEEeCCeEEEEEcCccceeecccCCCcccccCCCeeEEEEeccc-------ccCCccccceeeeEEeeC Q FBpp0290336 163 LQVLSDKVSFYYDCELRNTTLVTREPIELVFDSASTLYIGQAGS-------IIGGKFEGYLEKINVYGN 224 (1017) Q Consensus 163 LsV~g~~VtLyVDC~~~~t~~l~r~~~~l~~~~~~~l~IGq~g~-------~~~~~F~G~LQ~L~i~~d 224 (1017) |...+..++|+||+....+...... ...++....||||.... .....|+|-|++|+|.-. T Consensus 290 v~~~~~~~~L~VD~~~~~~~~~~~~--~~~l~~~~~l~iGG~p~~~~~~~~~~~~~F~GCi~~v~in~~ 356 (383) T 2jd4_A 290 AHKSKHRIVLTVDGNSVRAESPHTH--STSADTNDPIYVGGYPAHIKQNSLSSRASFRGCVRNLRLSRG 356 (383) T ss_dssp EEEETTEEEEEETTEEEEEC----C--CCCBCCCEEEEESCCCTTSCCTTCSCCCBCEEEEEEEEEC-- T ss_pred EEEeCCEEEEEECCeeeccccCCcc--cccccCCCCEEEcCccCcccccccccCCCCceEeeeEEECCC Confidence 9999999999999988665322111 12234567899997421 123469999999999654No 28>1dyk_A Laminin alpha 2 chain; metal binding protein; 2.0A {Mus musculus} SCOP: b.29.1.4 b.29.1.4 PDB: 1okq_A 1qu0_A Probab=98.08 E-value=3.9e-05 Score=88.11 Aligned_cols=126 Identities=10% Similarity=0.236 Sum_probs=85.7 Q ss_pred ceEEEEEEeecCCCCceEEEEEeCCCCeeEEEEEEcccccCceeEEEEEEecccccceeEeEe----ecccCCCCeeEEE Q FBpp0290336 87 EFAILITFRQSSLKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLASF----GVAHVPDKWNSIA 162 (1017) Q Consensus 87 eFSll~TlR~~~~~~g~LfsI~~~~~~~~qlgL~ls~~~~~~~~i~l~Y~~~~~~~~q~~~sF----~v~l~Dg~WHrla 162 (1017) +|+|.+.||... ..++||.+.+. ...+|.|.|..- .|.|.|....+. ....+ ...+.||+||+|. T Consensus 233 ~~~is~~frT~~-~~GlLl~~~~~--~~~~l~l~L~~G-----~l~~~~~~g~g~---~~~~~~~~~~~~l~DG~WH~V~ 301 (394) T 1dyk_A 233 DLLVEFEFRTTR-PTGVLLGVSSQ--KMDGMGIEMIDE-----KLMFHVDNGAGR---FTAIYDAEIPGHMCNGQWHKVT 301 (394) T ss_dssp EEEEEEEEEESC-SCEEEEEEECS--SSCEEEEEEETT-----EEEEEEESSSCC---EEEEECCCSTTSTTSSSCEEEE T ss_pred ceEEEEEEEeCC-CCcEEEEeccC--CCCEEEEEEECC-----EEEEEEECCCCc---eEEEEecCCCCcCcCCCcEEEE Confidence 788889998754 45788888763 346788887643 377777543221 22233 3577899999999 Q ss_pred EEEeCCeEEEEEcCccceeecccCCCcccccCCCeeEEEEecccc-------cCCccccceeeeEEeeCc Q FBpp0290336 163 LQVLSDKVSFYYDCELRNTTLVTREPIELVFDSASTLYIGQAGSI-------IGGKFEGYLEKINVYGNP 225 (1017) Q Consensus 163 LsV~g~~VtLyVDC~~~~t~~l~r~~~~l~~~~~~~l~IGq~g~~-------~~~~F~G~LQ~L~i~~dp 225 (1017) |...+..++|+||+.......... ....++....||||..... ....|+|-|++|+|.-.+ T Consensus 302 v~~~~~~~~L~VD~~~~~~~~~~~--~~~~~~~~~~l~iGG~p~~~~~~~~~~~~~F~GCi~~v~in~~~ 369 (394) T 1dyk_A 302 AKKIKNRLELVVDGNQVDAQSPNS--ASTSADTNDPVFVGGFPGGLNQFGLTTNIRFRGCIRSLKLTKGT 369 (394) T ss_dssp EEEETTEEEEEETTEEEEEECCCT--TCCCBCCCBCCEESCCCTTCCCTTCSCCCCCEEEEEEEEEECTT T ss_pred EEEeCCEEEEEECCcccccccCCc--cccccccCCCEEECCCCCcccccCccccCCccccccEEEECCcc Confidence 999999999999998765532211 1222345678999875211 124699999999996543No 29>4qvs_A S-layer domain-containing protein; human microbiome, midwest center for structural genomics, MC biology; 2.10A {Ruminiclostridium thermocellum atcc 27ORGANISM_TAXID} Probab=98.08 E-value=6.3e-06 Score=86.36 Aligned_cols=164 Identities=15% Similarity=0.200 Sum_probs=97.0 Q ss_pred EEEeccCCCCcceEEcCC-CccCCCcccccCCcCCceEEEEEEeecCCCC---ceEEEEEeCCCCeeEEEEEEcccccCc Q FBpp0290336 53 IEFGEAEDGFPAFRFLQT-ADVKSPYRMLLPEKLYEFAILITFRQSSLKG---GYLFSVVNPLDTVVQLGVHLSPVVKNS 128 (1017) Q Consensus 53 V~~v~G~d~~pAy~f~~~-a~l~~pt~~~fP~~~~eFSll~TlR~~~~~~---g~LfsI~~~~~~~~qlgL~ls~~~~~~ 128 (1017) ++.+.|..+ .|++|... ..+..|.. ++ ....+|+|.++||+..... ..||+.-+ ...++-|..... T Consensus 38 ~~~~~g~~g-~al~f~G~~~~v~~~~~-~~-~~~~~fTi~~Wvk~~~~~~~~~~~i~~~~~---~~~~~~l~~~~~---- 107 (227) T 4qvs_A 38 NGVVPGLNG-NSVSLDGVDDYVALPDG-IA-GTFYNFTIAFWVRLDTIGEQPIFDFFDSGS---NNKYMRLTAESD---- 107 (227) T ss_dssp SCEEECSSS-EEECCCSSSCEEECCTT-SS-TTCSSCCCCCCCCCSSCSSEEEEEEECTTC---SSCEEEEEECTT---- T ss_pred ceeccCCCC-cEEEecCcCCEEEcCcc-cc-cCCCCeEEEEEEEeCCCCCCcceeeEecCC---CCcEEEEEEcCC---- Confidence 455555433 68888654 34555532 11 1112999999999977654 34554322 223444433321 Q ss_pred eeEEEEEEecccccceeEeEeecccCCCCeeEEEEEEeCCeEEEEEcCccceeeccc-CCCcccccCCCeeEEEEecccc Q FBpp0290336 129 YNVSLVYTQADQNIGRKLASFGVAHVPDKWNSIALQVLSDKVSFYYDCELRNTTLVT-REPIELVFDSASTLYIGQAGSI 207 (1017) Q Consensus 129 ~~i~l~Y~~~~~~~~q~~~sF~v~l~Dg~WHrlaLsV~g~~VtLyVDC~~~~t~~l~-r~~~~l~~~~~~~l~IGq~g~~ 207 (1017) ..+.|.+...+... ...+.-...+.+++||+|++...+..++||||.+++.+.... ..+..+ +.....++||..... T Consensus 108 g~l~~~~~~~~~~~-~~~~~~~~~~~~~~W~hva~t~d~~~~~lYvnG~~~~~~~~~~~~~~~~-~~~~~~~~iG~~~~~ 185 (227) T 4qvs_A 108 GKIKFAMTQSGYYG-EKTITSGSALTEGVWKHVAVTLSGDTGTLYINGENVGENNTLSLRPLTF-LGETSKGYIGKSHQT 185 (227) T ss_dssp SCEEEEEESSCGGG-CEEEECCCCCCTTCCCCEEEEEETTEEEEEETTEEEEEETTCCC-CCSS-SGGGCCCCSSCCCCC T ss_pred CcEEEEEeCCCCCc-ceEEecCCcccCCcEEEEEEEEeCCeEEEEECCEEeeeccCCCCCcccc-cCCCcceeecCCcCC Confidence 23556654332211 122222356679999999999999999999999998875542 111111 122356788886321 Q ss_pred c-------CCccccceeeeEEeeCcccc Q FBpp0290336 208 I-------GGKFEGYLEKINVYGNPDAI 228 (1017) Q Consensus 208 ~-------~~~F~G~LQ~L~i~~dp~~a 228 (1017) . ...|.|.|.+|+|+..+... T Consensus 186 ~~~~~~~~~~~f~G~idevri~~~aLs~ 213 (227) T 4qvs_A 186 DSSEDPYYNSYLHGMIDDFRIFDRALSA 213 (227) T ss_dssp SCTTCSSTTCCCCSCCCCCCCCSSCCCH T ss_pred CccCCcccccccCcEeeEEEEEcccCCH Confidence 1 13799999999999887544No 30>2r1b_A Neurexin-1-beta, neurexin I-beta; beta-sandwich, cell adhesion, splicing; 1.72A {Rattus norvegicus} SCOP: b.29.1.4 PDB: 3mw2_A* 3b3q_E* 3mw3_A* Probab=98.04 E-value=5.5e-05 Score=80.23 Aligned_cols=127 Identities=16% Similarity=0.177 Sum_probs=82.5 Q ss_pred ceEEEEEEeecCCCCceEEEEEeCCCCeeEEEEEEcccccCceeEEEEEEecccccceeEeEe-ecccCCCCeeEEEEEE Q FBpp0290336 87 EFAILITFRQSSLKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLASF-GVAHVPDKWNSIALQV 165 (1017) Q Consensus 87 eFSll~TlR~~~~~~g~LfsI~~~~~~~~qlgL~ls~~~~~~~~i~l~Y~~~~~~~~q~~~sF-~v~l~Dg~WHrlaLsV 165 (1017) .+.|.+.||... ..+.||.+.+......+|.|+|..- .|.|.|....+. ..... ...+.|++||+|.|.. T Consensus 36 ~~~isl~frT~~-~~GlLl~~~~~~~~~d~l~l~L~~G-----~l~~~~~~G~~~---~~~~~~~~~l~DG~WH~V~v~r 106 (220) T 2r1b_A 36 ADRLAIGFSTVQ-KEAVLVRVDSSSGLGDYLELHIHQG-----KIGVKFNVGTDD---IAIEESNAIINDGKYHVVRFTR 106 (220) T ss_dssp EEEEEEEEECCC-SSEEEEEEEESTTCCCEEEEEEETT-----EEEEEEESSSSC---EEEECTTCCCCSSSCEEEEEEE T ss_pred CCEEEEEEEECC-CCeEEEEEcCCCCCCCEEEEEEeCC-----EEEEEEECCCCc---EEEecCCcCcCCCCCEEEEEEE Confidence 678888888765 4578888777422457888888543 377888654321 22233 5678899999999999 Q ss_pred eCCeEEEEEcCccceee-cc-cCCCccc---------------------------ccCCCeeEEEEecccccCCccccce Q FBpp0290336 166 LSDKVSFYYDCELRNTT-LV-TREPIEL---------------------------VFDSASTLYIGQAGSIIGGKFEGYL 216 (1017) Q Consensus 166 ~g~~VtLyVDC~~~~t~-~l-~r~~~~l---------------------------~~~~~~~l~IGq~g~~~~~~F~G~L 216 (1017) .+..++|.||.....+. +. ......+ .+.....||||-.. ....|+|=| T Consensus 107 ~~~~~~L~VD~~~~~~~~~~g~~~~~~l~~~~~~~~~~~g~~~~~~~~d~~~~~~~~n~~~~l~iGG~p--~~~~F~GCi 184 (220) T 2r1b_A 107 SGGNATLQVDSWPVIERYPAGNNDNERLAIARQRIPYRLGRVVDEWLLDKGRQLTIFNSQATIIIGGKE--QGQPFQGQL 184 (220) T ss_dssp ETTEEEEEETTSCCEEECC-----------------CHHHHHHHHHHHHHHHGGGSBCCEEEEEESSTT--TTCCCCEEE T ss_pred eCCEEEEEECCCcceeeccCCCCccceeeccccccceeecccccccccccccceeEecCcCcEEECCcc--CCCCCeEEE Confidence 99999999998764331 11 0000000 11223679998752 245699999 Q ss_pred eeeEEeeC Q FBpp0290336 217 EKINVYGN 224 (1017) Q Consensus 217 Q~L~i~~d 224 (1017) ++|+|--- T Consensus 185 ~~v~in~~ 192 (220) T 2r1b_A 185 SGLYYNGL 192 (220) T ss_dssp EEEEETTB T ss_pred CcEEECCE Confidence 99998543No 31>1h30_A GAS6, growth-arrest-specific protein; laminin G-domain protein, vitamin K-dependent protein, AXL/SKY/MER ligand, laminin G- like domain; 2.2A {Homo sapiens} SCOP: b.29.1.4 b.29.1.4 PDB: 2c5d_A* 4ra0_A* Probab=97.78 E-value=0.00036 Score=80.96 Aligned_cols=127 Identities=13% Similarity=0.148 Sum_probs=85.2 Q ss_pred ceEEEEEEeecCCCCceEEEEEeCCCCeeEEEEEEcccccCceeEEEEEEecccccceeEeEeecccCCCCeeEEEEEEe Q FBpp0290336 87 EFAILITFRQSSLKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLASFGVAHVPDKWNSIALQVL 166 (1017) Q Consensus 87 eFSll~TlR~~~~~~g~LfsI~~~~~~~~qlgL~ls~~~~~~~~i~l~Y~~~~~~~~q~~~sF~v~l~Dg~WHrlaLsV~ 166 (1017) .|+|.+.||... ..|.||...+. +...+|.|+|..- .|.|.|...+.. .+..-...+.|++||+|.|... T Consensus 62 ~~~isl~frT~~-~~GlLl~~~~~-~~~d~~~L~L~~G-----~l~~~~~~g~~~---~~~~~~~~lnDg~WH~V~v~~~ 131 (422) T 1h30_A 62 RLVAEFDFRTFD-PEGILLFAGGH-QDSTWIVLALRAG-----RLELQLRYNGVG---RVTSSGPVINHGMWQTISVEEL 131 (422) T ss_dssp CCEEEEEEEECC-SSEEEEEEESC-TTSEEEEEEEETT-----EEEEEEEETTEE---EEEEEEEECCSSCCEEEEEEEC T ss_pred cEEEEEEEEeCC-CCeEEEEeCCC-CCCCEEEEEEECC-----EEEEEEECCCCc---eEEeCCceecCCCCEEEEEEEc Confidence 788888898765 55788888775 4457899998765 377777654321 2222345778999999999999 Q ss_pred CCeEEEEEcCccceeecccCCCcccccC-CCeeEEEEeccc-------ccCCccccceeeeEEee Q FBpp0290336 167 SDKVSFYYDCELRNTTLVTREPIELVFD-SASTLYIGQAGS-------IIGGKFEGYLEKINVYG 223 (1017) Q Consensus 167 g~~VtLyVDC~~~~t~~l~r~~~~l~~~-~~~~l~IGq~g~-------~~~~~F~G~LQ~L~i~~ 223 (1017) +..++|+||-....+...+.....+... ....+|||-... .....|.|=|++|+|+- T Consensus 132 ~~~~~l~vD~~~~~~~~~~g~~~~l~~~~~~~~lyvGG~p~~~~~~~~~~~~~F~GCi~~l~~~n 196 (422) T 1h30_A 132 ARNLVIKVNRDAVMKIAVAGDLFQPERGLYHLNLTVGGIPFHEKDLVQPINPRLDGCMRSWNWLN 196 (422) T ss_dssp SSEEEEEETTEEEEEEECCSCSSEEETTEEECEEEESSCSSCGGGSSSCCCCCCCEEEEEEEEC- T ss_pred CCEEEEEECCcceEeeecCCcccccccCcccceEEEecccCcccccccccCCCCCEEeeeeEEcC Confidence 9999999998765443333322223210 135799986521 11246999999999633No 32>2jd4_A Laminin subunit alpha-1; basement membrane protein, metal binding protein; 1.9A {Mus musculus} SCOP: b.29.1.0 Probab=97.72 E-value=0.00061 Score=77.85 Aligned_cols=125 Identities=16% Similarity=0.267 Sum_probs=83.3 Q ss_pred ceEEEEEEeecCCCCceEEEEEeCCCCeeEEEEEEcccccCceeEEEEEEecccccceeEeEeecccCCCCeeEEEEEEe Q FBpp0290336 87 EFAILITFRQSSLKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLASFGVAHVPDKWNSIALQVL 166 (1017) Q Consensus 87 eFSll~TlR~~~~~~g~LfsI~~~~~~~~qlgL~ls~~~~~~~~i~l~Y~~~~~~~~q~~~sF~v~l~Dg~WHrlaLsV~ 166 (1017) +|+|.+.||.... .+.||-..+. +...+|.|+|..- .|.|.|.-.++. ..++....+.|++||+|.|... T Consensus 44 ~~~is~~frT~~~-~GlLl~~~~~-~~~d~~~l~L~~G-----~l~~~~~~g~~~---~~~~~~~~v~Dg~WH~V~v~r~ 113 (383) T 2jd4_A 44 RLQVQLSIRTFAS-SGLIYYVAHQ-NQMDYATLQLQEG-----RLHFMFDLGKGR---TKVSHPALLSDGKWHTVKTEYI 113 (383) T ss_dssp EEEEEEEEEECCS-CEEEEEEECT-TSSSEEEEEEETT-----EEEEEEECSSCE---EEEECCCCCTTSSCEEEEEEEE T ss_pred ceEEEEEEEeCCC-CeEEEEeCCC-CCCcEEEEEEECC-----EEEEEEECCCCe---EEEeCCccccCCCCEEEEEEEE Confidence 8899999997554 4687777653 3456888888654 377777543321 2223355678999999999999 Q ss_pred CCeEEEEEcCccceeecccCCCcccccCCCeeEEEEecccc--------cCCccccceeeeEEee Q FBpp0290336 167 SDKVSFYYDCELRNTTLVTREPIELVFDSASTLYIGQAGSI--------IGGKFEGYLEKINVYG 223 (1017) Q Consensus 167 g~~VtLyVDC~~~~t~~l~r~~~~l~~~~~~~l~IGq~g~~--------~~~~F~G~LQ~L~i~~ 223 (1017) +..++|+||=........+.....+ +....||||-.... ....|.|-|++|+|.. T Consensus 114 ~~~~~L~vD~~~~~~~~~~~~~~~l--~~~~~l~iGG~p~~~~~~~~~~~~~~F~GCi~~l~in~ 176 (383) T 2jd4_A 114 KRKAFMTVDGQESPSVTVVGKATTL--DVERKLYLGGLPSHYRARNIGTITHSIPACIGEIMVNG 176 (383) T ss_dssp TTEEEEEETTEECCCEECCSSCCCC--CCCSEEEESSCCTTCCCCSSCSCCSBCCEEEEEEEETT T ss_pred CCEEEEEEeCCccceeecCCCCcee--cCCCCEEEeCcCccccccccccccCCeeeEeeeEEECC Confidence 9999999997655443322222222 33467999864210 1245999999999854No 33>1a8d_A Tetanus neurotoxin; clostridial, ganglioside binding region; 1.57A {Clostridium tetani} SCOP: b.29.1.6 b.42.4.2 PDB: 1af9_A 1fv3_A* 1fv2_A* 3hmy_A* 3hn1_A* 1d0h_A* 1dfq_A* 1dll_A* 1yxw_A* 1yyn_A* 1diw_A* Probab=97.66 E-value=0.0016 Score=76.32 Aligned_cols=165 Identities=10% Similarity=0.147 Sum_probs=97.4 Q ss_pred CcEEEeccCCCCcceEEcCCCc----cCCCcccccCCcCC-ceEEEEEEeecCCC-C------ceEEEEEeCCC-----C Q FBpp0290336 51 AGIEFGEAEDGFPAFRFLQTAD----VKSPYRMLLPEKLY-EFAILITFRQSSLK-G------GYLFSVVNPLD-----T 113 (1017) Q Consensus 51 ~GV~~v~G~d~~pAy~f~~~a~----l~~pt~~~fP~~~~-eFSll~TlR~~~~~-~------g~LfsI~~~~~-----~ 113 (1017) ..++++.|.. ..|+.|..... |..|.. ++...+. +|||.+++|+.... . .-+++|.+..+ . T Consensus 47 G~vs~v~G~~-GkAl~fdG~~~S~~~V~lp~~-ll~~~~~~sFTISfWVK~~~~~t~~~~~y~~g~~~Ii~~~~~~w~~~ 124 (452) T 1a8d_A 47 PDAQLVPGIN-GKAIHLVNNESSEVIVHKAMD-IEYNDMFNNFTVSFWLRVPKVSASHLEQYGTNEYSIISSMKKHSLSI 124 (452) T ss_dssp TTCEEEECSS-SEEEEEESSTTCCEEEECCGG-GTTTTTTSCEEEEEEEECCCCCHHHHHHHTTCEEEEEECCEECGGGC T ss_pred CCceecCCcc-cceEEEcCCCCceEEEecCch-hcccCCCCCEEEEEEEeccccCcccccccccCceEEEeccCcccccC Confidence 4578887755 47999976542 444443 3444456 99999999997653 1 12345554321 1 Q ss_pred eeEEEEEEcccccCceeEEEEEEecccccceeEeEe-----ecc-cCCCCeeEEEEEEe-CCeEEEEEcCccceeecccC Q FBpp0290336 114 VVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLASF-----GVA-HVPDKWNSIALQVL-SDKVSFYYDCELRNTTLVTR 186 (1017) Q Consensus 114 ~~qlgL~ls~~~~~~~~i~l~Y~~~~~~~~q~~~sF-----~v~-l~Dg~WHrlaLsV~-g~~VtLyVDC~~~~t~~l~r 186 (1017) ...+.|.+... .+.|.+....+. .+...| .++ +.+++||||++.+. ...++||||-+++.+..+.. T Consensus 125 ~~G~~i~l~~g-----~l~f~~~~~~G~--~~~i~~~~~~~~i~~v~~g~W~HVAvT~D~~~~~~lYVNG~lv~~~~~~~ 197 (452) T 1a8d_A 125 GSGWSVSLKGN-----NLIWTLKDSAGE--VRQITFRDLPDKFNAYLANKWVFITITNDRLSSANLYINGVLMGSAEITG 197 (452) T ss_dssp EEEEEEEEETT-----EEEEEEECTTSC--EEEEEEECCSBTTSCSSSSSCEEEEEEECTTSEEEEEETTEEEEEEECTT T ss_pred CCCcEEEEcCC-----eEEEEEEeCCCC--cceeEeeccccccCcCCCCceEEEEEEEeCCCCEEEeECCEEeeeecccc Confidence 34455555432 245554432221 121212 222 23799999999998 55679999999987765432 Q ss_pred CCcccccCCCeeEEEEecccccCCccccceeeeEEeeCcccc Q FBpp0290336 187 EPIELVFDSASTLYIGQAGSIIGGKFEGYLEKINVYGNPDAI 228 (1017) Q Consensus 187 ~~~~l~~~~~~~l~IGq~g~~~~~~F~G~LQ~L~i~~dp~~a 228 (1017) . ..+ .....+.|+..+ .....|.|.|.+|+|+..+..+ T Consensus 198 ~-~~i--~~~~~~~lgiG~-~~d~~f~G~IDEvRIynrALS~ 235 (452) T 1a8d_A 198 L-GAI--REDNNITLKLDR-CNNNNQYVSIDKFRIFCKALNP 235 (452) T ss_dssp C-CCC--CCCSEEEEEEES-CCCTTCEEEEEEEEEESSCCCH T ss_pred c-ccc--ccCCeEEEEEcc-CCCCCCcEEEEEEEEECCcCCH Confidence 1 111 223345555422 1234699999999999987544No 34>4dqa_A Uncharacterized protein; two domains structure, DUF 1735, laminin_G_3 concanavalin A- lectin/glucanases superfamily domain; HET: MSE; 1.50A {Bacteroides ovatus} Probab=97.54 E-value=0.0013 Score=74.82 Aligned_cols=150 Identities=11% Similarity=0.105 Sum_probs=90.7 Q ss_pred CcceEEcCCCccCCCcccccCCcCCceEEEEEEeecCCC-CceEEEEEeCCCCeeEEEEEEcccccCc-eeEEEEEEecc Q FBpp0290336 62 FPAFRFLQTADVKSPYRMLLPEKLYEFAILITFRQSSLK-GGYLFSVVNPLDTVVQLGVHLSPVVKNS-YNVSLVYTQAD 139 (1017) Q Consensus 62 ~pAy~f~~~a~l~~pt~~~fP~~~~eFSll~TlR~~~~~-~g~LfsI~~~~~~~~qlgL~ls~~~~~~-~~i~l~Y~~~~ 139 (1017) ..|++|.. ..+..+.... ....+|+|-+++|+.... ...||+ . ++ .|.|++.....+. ..-.|.+... T Consensus 140 ~~al~f~G-~yi~v~~~~~--~~~~~fTi~~Wvk~~~~~~~~~i~g---~-~g--~~~l~~~~~~~gi~~~~~l~~~g~- 209 (355) T 4dqa_A 140 TKAGNFSN-HYISVKFPVG--TFFSSFTYEALINVDYFLDNNTIMG---T-EG--VMILRIGDAGGGITPKDYLEVAGG- 209 (355) T ss_dssp CEEEEEES-CCEEECCCTT--CCBSSEEEEEEEEESCCCSSEEEEE---E-TT--TEEEEEEEGGGTSEEEEEEEEEES- T ss_pred ccccccCC-ceEEecCCCC--CCccCEEEEEEEEccccCCcceEEc---C-CC--cEEEEecCCCcCcCcCCEEEEcCC- Confidence 56777765 4444442221 111299999999997654 334554 2 22 3444543221000 1123344321 Q ss_pred cccceeEeEeecccCCCCeeEEEEEEe--CCeEEEEEcCccceeecccCCCcccccCCCeeEEEEecccc--cCCccccc Q FBpp0290336 140 QNIGRKLASFGVAHVPDKWNSIALQVL--SDKVSFYYDCELRNTTLVTREPIELVFDSASTLYIGQAGSI--IGGKFEGY 215 (1017) Q Consensus 140 ~~~~q~~~sF~v~l~Dg~WHrlaLsV~--g~~VtLyVDC~~~~t~~l~r~~~~l~~~~~~~l~IGq~g~~--~~~~F~G~ 215 (1017) . .+ .-...+.+++||||++... +..++||||.+++.+....... +.+.....++||+.... ....|.|. T Consensus 210 --~--~~-~s~~~~~~~~W~Hva~t~d~~~~~~~lYvnG~~~~~~~~~~~~--~~~~~~~~l~IG~~~~~~~~~~~f~G~ 282 (355) T 4dqa_A 210 --Q--NY-RVTKPLLTNRWYHVALTYDQPTGKTGIYVNGEKWAGSDWGIDG--FDPNSDMGFYIGRIYGFKWGERPFHGK 282 (355) T ss_dssp --S--CE-ECSSCCCSSCEEEEEEEEETTTTEEEEEETTEEEEEEECCCCC--BCTTSTTCEEESCCTTCTTCCCCCEEE T ss_pred --C--cc-ccCCccCCCCEEEEEEEEECCCCEEEEEECCEEEeEEEcCCCc--cccCCCceEEEcCCCCCCCCCccceEE Confidence 1 11 1134667999999999999 8899999999998876553322 22223467999986321 24579999 Q ss_pred eeeeEEeeCcccc Q FBpp0290336 216 LEKINVYGNPDAI 228 (1017) Q Consensus 216 LQ~L~i~~dp~~a 228 (1017) |.+|||+...... T Consensus 283 idevri~~~aLs~ 295 (355) T 4dqa_A 283 MSEVRVWSVARTE 295 (355) T ss_dssp EEEEEEESSCCCH T ss_pred EEEEEEECCCCCH Confidence 9999999987554No 35>1dyk_A Laminin alpha 2 chain; metal binding protein; 2.0A {Mus musculus} SCOP: b.29.1.4 b.29.1.4 PDB: 1okq_A 1qu0_A Probab=97.53 E-value=0.0013 Score=75.56 Aligned_cols=126 Identities=15% Similarity=0.231 Sum_probs=83.6 Q ss_pred ceEEEEEEeecCCCCceEEEEEeCCCCeeEEEEEEcccccCceeEEEEEEecccccceeEeEeecccCCCCeeEEEEEEe Q FBpp0290336 87 EFAILITFRQSSLKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLASFGVAHVPDKWNSIALQVL 166 (1017) Q Consensus 87 eFSll~TlR~~~~~~g~LfsI~~~~~~~~qlgL~ls~~~~~~~~i~l~Y~~~~~~~~q~~~sF~v~l~Dg~WHrlaLsV~ 166 (1017) +|+|.+.||... ..+.||-..+. +...+|.|+|..- .|.|.|....+. ..+.....+.|++||+|.|... T Consensus 58 ~~~is~~frT~~-~~GlLl~~~~~-~~~d~~~l~l~~G-----~l~~~~~~g~g~---~~~~~~~~~nDg~WH~V~v~~~ 127 (394) T 1dyk_A 58 RLTIELEVRTEA-ESGLLFYMARI-NHADFATVQLRNG-----FPYFSYDLGSGD---TSTMIPTKINDGQWHKIKIVRV 127 (394) T ss_dssp EEEEEEEEEECC-SCEEEEEEECT-TSSSEEEEEEETT-----EEEEEEESSSCE---EEEECCSCCCSSSCEEEEEEEE T ss_pred ceEEEEEEEECC-CCeEEEEeCCC-CCCCeEEEEEECC-----EEEEEEECCCCc---EEEEecceecCCCeEEEEEEEe Confidence 788889999754 45687776653 3457888888654 377777543321 2233355778999999999999 Q ss_pred CCeEEEEEcCccceeecccCCCcccccCCCeeEEEEecccc--------cCCccccceeeeEEeeCc Q FBpp0290336 167 SDKVSFYYDCELRNTTLVTREPIELVFDSASTLYIGQAGSI--------IGGKFEGYLEKINVYGNP 225 (1017) Q Consensus 167 g~~VtLyVDC~~~~t~~l~r~~~~l~~~~~~~l~IGq~g~~--------~~~~F~G~LQ~L~i~~dp 225 (1017) +..++|+||=....... +..... ++....||||-.... ....|.|-|++|+|...+ T Consensus 128 ~~~~~L~vD~~~~~~~~-~~~~~~--l~~~~~l~lGG~p~~~~~~~~~~~~~~F~GCi~~l~in~~~ 191 (394) T 1dyk_A 128 KQEGILYVDDASSQTIS-PKKADI--LDVVGILYVGGLPINYTTRRIGPVTYSLDGCVRNLHMEQAP 191 (394) T ss_dssp TTEEEEEETTEEEEEEC-STTCCC--CCCCSEEEESSCCTTCCCCSSCSCCSBCSEEEEEEEESSSC T ss_pred CCEEEEEECCcccccCc-CCCCcc--ccCCCceEEcccCCcccccccccCCCCceEEeeEEEECCEE Confidence 99999999976544332 111112 334567999864211 113599999999986543No 36>2jkb_A Sialidase B; intramolecular trans-sialidase, lyase, glycosidase, neuraminidase; HET: SKD; 1.54A {Streptococcus pneumoniae} PDB: 2vw2_A* 2vw1_A* 2vw0_A* 4foq_A 4fov_A* 4fow_A 4foy_A* 4fp2_A* 4fp3_A* 4fpc_A* 4fpe_A* 4fpf_A* 4fpg_A* 4fph_A* 4fpj_A* 4fpk_A* 4fpl_A* 4fpo_B* 4fpy_A* 4fq4_A* Probab=97.44 E-value=0.0012 Score=81.73 Aligned_cols=164 Identities=10% Similarity=0.061 Sum_probs=100.6 Q ss_pred CcceEEcCCCccCCCcccccCCcC--CceEEEEEEeecCC-CCceEEEEEeCCC--CeeEEEEEEcccccCceeEEEEEE Q FBpp0290336 62 FPAFRFLQTADVKSPYRMLLPEKL--YEFAILITFRQSSL-KGGYLFSVVNPLD--TVVQLGVHLSPVVKNSYNVSLVYT 136 (1017) Q Consensus 62 ~pAy~f~~~a~l~~pt~~~fP~~~--~eFSll~TlR~~~~-~~g~LfsI~~~~~--~~~qlgL~ls~~~~~~~~i~l~Y~ 136 (1017) ..|+.|.... +.++... -..+ .+|||.++||+... +...||++.+... ...+|.|.+... .++.|... T Consensus 34 g~a~~fdG~~-v~l~~~~--~~~l~~~~fTv~~Wvk~~~~~~~~~lfs~~~~~~~~~~~~~~l~~~~~----g~~~~~~~ 106 (686) T 2jkb_A 34 GGSYQLNNKS-IDISSLL--LDKLSGESQTVVMKFKADKPNSLQALFGLSNSKAGFKNNYFSIFMRDS----GEIGVEIR 106 (686) T ss_dssp EEEEEEESSC-EECHHHH--GGGCCSSCEEEEEEEECSSCCSEEEEEEEECCSTTCTTCEEEEEEETT----SCEEEEEE T ss_pred cceEEecCce-EECchhc--cccCCCCCeEEEEEEEeCCCCCCCEEEEecCCCCCCccccEEEEEeCC----CeEEEEEE Confidence 4688885543 4444332 2335 39999999999754 4456999886422 235677877643 12666665 Q ss_pred ecccccceeEeEeeccc-----CCCCeeEEEEEEeCC--eEEEEEcCccceeecccCCCcccccCCCeeEEEEecccc-- Q FBpp0290336 137 QADQNIGRKLASFGVAH-----VPDKWNSIALQVLSD--KVSFYYDCELRNTTLVTREPIELVFDSASTLYIGQAGSI-- 207 (1017) Q Consensus 137 ~~~~~~~q~~~sF~v~l-----~Dg~WHrlaLsV~g~--~VtLyVDC~~~~t~~l~r~~~~l~~~~~~~l~IGq~g~~-- 207 (1017) ..+.... ..+.....+ .+++||+|++..... .++||||-+++.+........--.+.....++||+.... T Consensus 107 ~~~~~~~-~~~~~~~~~~~~~~~~g~W~Hva~t~d~~~g~~~lYvnG~~~~~~~~~~~~~~~~~~~~~~~~IG~~~~~g~ 185 (686) T 2jkb_A 107 DAQKGIN-YLFSRPASLWGKHKGQAVENTLVFVSDSKDKTYTMYVNGIEVFSETVDTFLPISNINGIDKATLGAVNREGK 185 (686) T ss_dssp ETTTTEE-EEEEESSCCCCEETTEECCEEEEEEEETTTTEEEEEETTEEEEEEECSSCCCGGGSTTCCEEEESSEEETTE T ss_pred eCCCcee-EEeeccccccccccCCCCeEEEEEEEECCCCeEEEEECCEEEEeeccccceecccCCCCceEEECCeecCCC Confidence 4432211 111111111 258999999999764 899999999988765432111011223358999984211 Q ss_pred cCCccccceeeeEEeeCcccccccCC Q FBpp0290336 208 IGGKFEGYLEKINVYGNPDAINVTCM 233 (1017) Q Consensus 208 ~~~~F~G~LQ~L~i~~dp~~a~~~C~ 233 (1017) ....|.|.|.+|+|+..+....++.. T Consensus 186 ~~~~f~G~Idev~i~~~aLs~~eI~~ 211 (686) T 2jkb_A 186 EHYLAKGSIDEISLFNKAISDQEVST 211 (686) T ss_dssp EESCCEEEEEEEEEESSCCCHHHHHT T ss_pred ccccccceEEEEEEecccCCHHHHHH Confidence 12249999999999988866655443No 37>2vu9_A Botulinum neurotoxin A heavy chain; hydrolase, metalloprotease, ganglioside, metal-B toxin, protease, membrane, receptor, secreted; HET: BGC GAL SIA NGA; 1.6A {Clostridium botulinum} SCOP: b.29.1.6 b.42.4.2 PDB: 2vua_A 4jra_A 3fuo_A 4iqp_A Probab=97.43 E-value=0.0034 Score=71.72 Aligned_cols=168 Identities=9% Similarity=0.150 Sum_probs=104.2 Q ss_pred CCcEEEeccCCCCcceEEcCCC----ccCCCcccccCCcCC-ceEEEEEEeecCCCCce----EEEEEeCCCCeeEEEEE Q FBpp0290336 50 FAGIEFGEAEDGFPAFRFLQTA----DVKSPYRMLLPEKLY-EFAILITFRQSSLKGGY----LFSVVNPLDTVVQLGVH 120 (1017) Q Consensus 50 ~~GV~~v~G~d~~pAy~f~~~a----~l~~pt~~~fP~~~~-eFSll~TlR~~~~~~g~----LfsI~~~~~~~~qlgL~ 120 (1017) ...|+++.| . ..||.+.... .|.+ +..++-+.++ +|||.+++|..+.+..+ .++|.+......-..|. T Consensus 48 ~G~v~~~~G-~-g~A~~L~~s~~s~~~v~~-~ndii~n~~~nnFSIsFWvr~~k~~~~~~~~~e~tIIn~k~~NsGW~Is 124 (444) T 2vu9_A 48 GSKVNFDPI-D-KNQIQLFNLESSKIEVIL-KNAIVYNSMYENFSTSFWIRIPKYFNSISLNNEYTIINCMENNSGWKVS 124 (444) T ss_dssp CTTEEECSS-C-TTCEEEESSTTCCEEEEC-CGGGSCEESSCCEEEEEEEECCCCCSGGGTTCCEEEEEEEETTEEEEEE T ss_pred CCceEEEec-C-CcEEEeccCCCceEEEec-CchhhhccccCceEEEEEEECCCCCcccccCCceEeEeeccCCCCeEEE Confidence 456889888 4 4688885544 2333 4445566778 99999999997766533 45555433233334444 Q ss_pred EcccccCceeEEEEEEecccccceeEeEee----cccC--CCCeeEEEEEEe-CCeEEEEEcCccceeecccCCCccccc Q FBpp0290336 121 LSPVVKNSYNVSLVYTQADQNIGRKLASFG----VAHV--PDKWNSIALQVL-SDKVSFYYDCELRNTTLVTREPIELVF 193 (1017) Q Consensus 121 ls~~~~~~~~i~l~Y~~~~~~~~q~~~sF~----v~l~--Dg~WHrlaLsV~-g~~VtLyVDC~~~~t~~l~r~~~~l~~ 193 (1017) +... .+.+-..+.. ...+...|. ..+. .++||+|+++|. -..+++|+|-+++.+..+.-.. .+. T Consensus 125 l~~n-----~liwtl~dsn--gn~k~i~f~y~~~~~I~dyinkW~hVtIt~Drlg~a~IYING~lv~~k~I~~lg-~I~- 195 (444) T 2vu9_A 125 LNYG-----EIIWTLQDTQ--EIKQRVVFKYSQMINISDYINRWIFVTITNNRLNNSKIYINGRLIDQKPISNLG-NIH- 195 (444) T ss_dssp EETT-----EEEEEEECTT--SCEEEEEEECCSBSSSCSSTTSCEEEEEEECTTSEEEEEETTEEEEEEECTTCC-CEE- T ss_pred ECCC-----eEEEEEEecC--CceeeEEEecccccccccccCceEEEEEEECCCCCEEEEECCEEeeecchhhcc-cee- Confidence 5433 2334333322 233444553 2222 389999999999 5677999999999998775421 222 Q ss_pred CCCeeEEEEecccccCCccccceeeeEEeeCccccccc Q FBpp0290336 194 DSASTLYIGQAGSIIGGKFEGYLEKINVYGNPDAINVT 231 (1017) Q Consensus 194 ~~~~~l~IGq~g~~~~~~F~G~LQ~L~i~~dp~~a~~~ 231 (1017) .+..+-++-.+ .....+++.|.+|+|+..+-...|. T Consensus 196 -~sn~i~l~v~~-~~d~~~~~~ID~f~Ifnk~Lt~~EI 231 (444) T 2vu9_A 196 -ASNNIMFKLDG-CRDTHRYIWIKYFNLFDKELNEKEI 231 (444) T ss_dssp -CCSEEEEEEES-CCCTTCEEEEEEEEEESSCCCHHHH T ss_pred -eCCeEEEEecc-cCCCccceeeeeeEEecccCCHHHH Confidence 23344444422 2345688999999999988665444No 38>2wjs_A Laminin subunit alpha-2; integrin, secreted, coiled coil, glycoprotein, laminin EGF-like domain, extracellular matrix, laminin G-like domain; HET: NAG; 2.80A {Mus musculus} Probab=97.42 E-value=0.0011 Score=80.65 Aligned_cols=124 Identities=13% Similarity=0.152 Sum_probs=78.9 Q ss_pred ceEEEEEEeecCCCCceEEEEEeCCCCeeEEEEEEcccccCceeEEEEEEecccccceeEe--EeecccCCCCeeEEEEE Q FBpp0290336 87 EFAILITFRQSSLKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLA--SFGVAHVPDKWNSIALQ 164 (1017) Q Consensus 87 eFSll~TlR~~~~~~g~LfsI~~~~~~~~qlgL~ls~~~~~~~~i~l~Y~~~~~~~~q~~~--sF~v~l~Dg~WHrlaLs 164 (1017) ++.|.+.||.. ...|.||.+.+. ...+|.|.|..- .|.|.|....... ..++ .....+.||+||+|.|. T Consensus 408 ~~~i~~~FRT~-~~~GlLl~~~~~--~~~~l~l~L~~G-----~l~~~~~~g~~~~-~~~~~~~~~~~l~DG~WH~V~l~ 478 (608) T 2wjs_A 408 GTEINLSFSTR-NESGIILLGSGG--GQAYYAIFLNKG-----RLEVHLSSGTRTM-RKIVIKPEPNRFHDGREHSVHVE 478 (608) T ss_dssp TEEEEEEEEES-CSSEEEEEEC-----CCEEEEEEETT-----EEEEEEEC----C-EEEEECCCSSCSSSSSCEEEEEE T ss_pred CcEEEEEEEeC-CCceEEEEEcCC--CCCEEEEEEECC-----EEEEEEECCCCce-eeEEEecCCcccCCCCEEEEEEE Confidence 67777888765 456788876553 345788887643 3677775433211 1122 22567889999999999 Q ss_pred EeCCeEEEEEcCccceeecccCCCcccccCCCeeEEEEecccc-------cCCccccceeeeEEee Q FBpp0290336 165 VLSDKVSFYYDCELRNTTLVTREPIELVFDSASTLYIGQAGSI-------IGGKFEGYLEKINVYG 223 (1017) Q Consensus 165 V~g~~VtLyVDC~~~~t~~l~r~~~~l~~~~~~~l~IGq~g~~-------~~~~F~G~LQ~L~i~~ 223 (1017) ..+..++|+||.+...+..+... ..+.. ..||||..... ....|+|=|++|+|-. T Consensus 479 ~~~~~~~L~VD~~~~~~~~~~~~-~~l~~---~~lylGG~p~~~~~~~~~~~~~F~GCi~~v~in~ 540 (608) T 2wjs_A 479 RTRGIFTVQIDEDRRHMQNLTEE-QPIEV---KKLFVGGAPPEFQPSPLRNIPAFQGCVWNLVINS 540 (608) T ss_dssp ECSSEEEEEESSSCCEEEECCCC-SCBCC---SCEEESCCCC--------CCCCCCEEEEEEEETT T ss_pred EeCCEEEEEECCCcceeeccCCC-ccccc---ccEEEeCCCccccccccccCCCCEEEcCeeEECC Confidence 99999999999987655433221 22222 36899875211 1246999999999853No 39>1h30_A GAS6, growth-arrest-specific protein; laminin G-domain protein, vitamin K-dependent protein, AXL/SKY/MER ligand, laminin G- like domain; 2.2A {Homo sapiens} SCOP: b.29.1.4 b.29.1.4 PDB: 2c5d_A* 4ra0_A* Probab=97.39 E-value=0.00089 Score=77.68 Aligned_cols=127 Identities=15% Similarity=0.224 Sum_probs=80.3 Q ss_pred ceEEEEEEeecCCCCceEEEEEeCCCCeeEEEEEEcccc-cCcee---EEEEEEecccccceeEeEeecccCCCCeeEEE Q FBpp0290336 87 EFAILITFRQSSLKGGYLFSVVNPLDTVVQLGVHLSPVV-KNSYN---VSLVYTQADQNIGRKLASFGVAHVPDKWNSIA 162 (1017) Q Consensus 87 eFSll~TlR~~~~~~g~LfsI~~~~~~~~qlgL~ls~~~-~~~~~---i~l~Y~~~~~~~~q~~~sF~v~l~Dg~WHrla 162 (1017) +|+|.+.||... ..|+||.+.+..+...+|.|+|..-. .++.+ |.|.+. .. ........+.||+||+|. T Consensus 250 ~~~is~~frT~~-~~GlLl~~~~~~~~~d~l~l~L~~g~~~g~l~~~~v~~~~~--~~----~~~~~~~~l~DG~WH~V~ 322 (422) T 1h30_A 250 EVEVVAHIRPAA-DTGVLFALWAPDLRAVPLSVALVDYHSTKKLKKQLVVLAVE--HT----ALALMEIKVCDGQEHVVT 322 (422) T ss_dssp CEEEEEEEEESS-SCEEEEEEEEGGGTEEEEEEEEESCC-----CCCEEEEEET--TE----EEEEEECCTTSSCCEEEE T ss_pred eeEEEEEEEeCC-CCEEEEEEeccCCCcCceEEEEeeccccccccccEEEEEEC--Ce----EEEEeeeeecCCCEEEEE Confidence 889999999764 45799988864344567888875320 01112 556552 21 122335778899999999 Q ss_pred EEEeCCeEEEEEcCccceeecccCCCc-c-----cccCCCeeEEEEecccc------cCCccccceeeeEE Q FBpp0290336 163 LQVLSDKVSFYYDCELRNTTLVTREPI-E-----LVFDSASTLYIGQAGSI------IGGKFEGYLEKINV 221 (1017) Q Consensus 163 LsV~g~~VtLyVDC~~~~t~~l~r~~~-~-----l~~~~~~~l~IGq~g~~------~~~~F~G~LQ~L~i 221 (1017) |.+.+..++|+||.....+........ . ..+.....||||..-.. ....|+|=|+ |+| T Consensus 323 l~~~~~~~~L~VD~~~~~~~~~~~~~~~~~~~l~~~l~~~~~lylGG~p~~~~~~~~~~~~F~GCi~-v~i 392 (422) T 1h30_A 323 VSLRDGEATLEVDGTRGQSEVSAAQLQERLAVLERHLRSPVLTFAGGLPDVPVTSAPVTAFYRGCMT-LEV 392 (422) T ss_dssp EEEETTEEEEEETTEECEESSCHHHHHHHHHHHHHHHTSCCEEEESCCCSCCTTSSSCCSBCCEEEE-EEE T ss_pred EEEECCEEEEEeCCccceeeccccchhhhhhhhhHhhccCccEEEcCcCCCcccccccCCCceEEEE-EEE Confidence 999999999999998765532211000 0 12445678999875211 1245899994 765No 40>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus} Probab=97.38 E-value=0.0018 Score=74.72 Aligned_cols=123 Identities=17% Similarity=0.302 Sum_probs=79.9 Q ss_pred ceEEEEEEeecCCCCceEEEEEeCCCCeeEEEEEEcccccCceeEEEEEEecccccceeEeE--eecccCCCCeeEEEEE Q FBpp0290336 87 EFAILITFRQSSLKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLAS--FGVAHVPDKWNSIALQ 164 (1017) Q Consensus 87 eFSll~TlR~~~~~~g~LfsI~~~~~~~~qlgL~ls~~~~~~~~i~l~Y~~~~~~~~q~~~s--F~v~l~Dg~WHrlaLs 164 (1017) +|+|.+.||.... .+.||-... +...+|.|+|..- .|.|.|....+. ..+. -...+.|++||+|.|. T Consensus 27 ~~~is~~frT~~~-~GlLl~~~~--~~~df~~l~L~~G-----~l~~~~~~G~g~---~~~~~~s~~~vnDg~WH~V~v~ 95 (410) T 3asi_A 27 SMHLFFQFKTTSL-DGLILYNSG--DGNDFIVVELVKG-----YLHYVFDLGNGA---NLIKGSSNKPLNDNQWHNVMIS 95 (410) T ss_dssp CEEEEEEEECSCS-CEEEEEEEB--STTCEEEEEEETT-----EEEEEEESSSCE---EEEECCCSSCSCSSSCEEEEEE T ss_pred eEEEEEEEEECCC-CEEEEEeCC--CCCCeEEEEEECC-----EEEEEEECCCCc---EEEEecCCCccCCCCCEEEEEE Confidence 7888889987654 467764443 3457888888654 377777543221 2222 2457889999999999 Q ss_pred EeCCe-EEEEEcCccceeecccCCCcccccCCCeeEEEEecccc----------cCCccccceeeeEEeeC Q FBpp0290336 165 VLSDK-VSFYYDCELRNTTLVTREPIELVFDSASTLYIGQAGSI----------IGGKFEGYLEKINVYGN 224 (1017) Q Consensus 165 V~g~~-VtLyVDC~~~~t~~l~r~~~~l~~~~~~~l~IGq~g~~----------~~~~F~G~LQ~L~i~~d 224 (1017) ....+ ++|+||-....... . .... ++....||||-.... ....|+|=|++|+|-.. T Consensus 96 ~~~~~~~~L~vD~~~~~~~~-~-~~~~--l~~~~~lyvGG~p~~~~~~~~~~~~~~~~F~GCi~~v~in~~ 162 (410) T 3asi_A 96 RDTSNLHTVKIDTKITTQIT-A-GARN--LDLKSDLYIGGVAKETYKSLPKLVHAKEGFQGCLASVDLNGR 162 (410) T ss_dssp ECTTCEEEEEETTEEEEEEC-T-TCCC--CCBCSCEEESCCCGGGGGGSCTTCCCSSBCCEEEEEEESSSC T ss_pred EcCCccEEEEECCccceecC-C-Ccee--eccCCCeEEcccccchhcccccccccccCcceEeeeeEECCe Confidence 99876 69999987653322 1 1112 233467999875211 12469999999988543No 41>3vuo_A NTNHA; protection of botulinum neurotoxin, botulinum neurotoxin, to; 3.90A {Clostridium botulinum} Probab=97.21 E-value=0.0057 Score=77.00 Aligned_cols=155 Identities=11% Similarity=0.160 Sum_probs=91.9 Q ss_pred CcEEEeccCCCCcceEEcCCCc-cCCCcccccCCcCC-ceEEEEEEeec-CCC-CceEEEEEeCCCCeeEEEEEEccccc Q FBpp0290336 51 AGIEFGEAEDGFPAFRFLQTAD-VKSPYRMLLPEKLY-EFAILITFRQS-SLK-GGYLFSVVNPLDTVVQLGVHLSPVVK 126 (1017) Q Consensus 51 ~GV~~v~G~d~~pAy~f~~~a~-l~~pt~~~fP~~~~-eFSll~TlR~~-~~~-~g~LfsI~~~~~~~~qlgL~ls~~~~ 126 (1017) .+++++.|.. ..|+.|..... +..|.. ++...+. +|||.+++|+. ... ...+|+-.+ ....+.|.+... T Consensus 864 G~~sfv~Gv~-GkAL~FDGSd~yV~LPn~-li~nslt~sFTVSFWVKplg~~T~~t~IIsskd---nnsGw~LsL~~n-- 936 (1196) T 3vuo_A 864 ESVELVYGVN-GESLYLKSPNETVEFSNN-FFTNGLTNNFTICFWLRFTGKDDDKTRLIGNKV---NNCGWEIYFEDN-- 936 (1196) T ss_dssp TTCEEEECSS-SEEEEECSSSCCEEEECG-GGGCCSSCCEEEEEEEEECCCCSSCEEEEEEEC---SSCEEEEEEETT-- T ss_pred CCceecCCCc-CceeEEcCCCceEEeCCc-ccccCCCCcEEEEEEEccCCCCCccceEEEecC---CCCCcEEEEcCC-- Confidence 3567776644 45899976544 544332 2222344 89999999994 222 122553332 122244555332 Q ss_pred CceeEEEEEEecccccceeEeEeecccCCCCeeEEEEEEe--CCeEEEEEcCccceeecccCCCcccccCCCeeEE-EEe Q FBpp0290336 127 NSYNVSLVYTQADQNIGRKLASFGVAHVPDKWNSIALQVL--SDKVSFYYDCELRNTTLVTREPIELVFDSASTLY-IGQ 203 (1017) Q Consensus 127 ~~~~i~l~Y~~~~~~~~q~~~sF~v~l~Dg~WHrlaLsV~--g~~VtLyVDC~~~~t~~l~r~~~~l~~~~~~~l~-IGq 203 (1017) .+.|...+..+ ..+...+. ++..++||||++.+. +..++||||-+++.+..+.... .+. .+..+. +|. T Consensus 937 ---tL~Fsi~Ds~G--neqsI~~d-dI~~GkW~HVAVTyDr~G~aLKLYVNGeLVaS~sisgL~-dI~--ssg~IsFIG~ 1007 (1196) T 3vuo_A 937 ---GLVFEIIDSNG--NQESVYLS-NVINNNWYYISISVDRLKDQLLIFINDKNVANVSIEQIL-NIY--STNVISLVNK 1007 (1196) T ss_dssp ---EEEEEEECTTC--CEEEEEEC-SCTTSCCEEEEEEEETTTTEEEEEETTEEEEEEECTTCC-CCC--CCSEEEECCC T ss_pred ---cEEEEEEeCCC--cceeeecC-CCCCCCEEEEEEEEECCCCEEEEeECCEEccccccccCc-ccc--cCCceeEecC Confidence 24555543332 22333443 556899999999998 6678999999998886554321 221 123333 443 Q ss_pred cccccCCccccceeeeEEeeCcccc Q FBpp0290336 204 AGSIIGGKFEGYLEKINVYGNPDAI 228 (1017) Q Consensus 204 ~g~~~~~~F~G~LQ~L~i~~dp~~a 228 (1017) . |.|.|.+|||+..+..+ T Consensus 1008 n-------FnG~IDEVRIYNRALSa 1025 (1196) T 3vuo_A 1008 N-------NSIYVEELSVLDKPVAS 1025 (1196) T ss_dssp S-------SCEEEEEEEEESSCCCH T ss_pred C-------CcEEeeEEEEECCCCCH Confidence 2 89999999999987443No 42>3v0a_B NTNH; botulinum neurotoxin, toxin, neurotoxin associated protein, progenitor toxin complex, VHH bound interlocked complex; HET: MES; 2.70A {Clostridium botulinum} PDB: 3v0b_B Probab=97.07 E-value=0.0079 Score=75.60 Aligned_cols=155 Identities=12% Similarity=0.175 Sum_probs=91.1 Q ss_pred CcEEEeccCCCCcceEEcCCCc-cCCCcccccCCcCC-ceEEEEEEeec-CCCCc-eEEEEEeCCCCeeEEEEEEccccc Q FBpp0290336 51 AGIEFGEAEDGFPAFRFLQTAD-VKSPYRMLLPEKLY-EFAILITFRQS-SLKGG-YLFSVVNPLDTVVQLGVHLSPVVK 126 (1017) Q Consensus 51 ~GV~~v~G~d~~pAy~f~~~a~-l~~pt~~~fP~~~~-eFSll~TlR~~-~~~~g-~LfsI~~~~~~~~qlgL~ls~~~~ 126 (1017) .+++++.|..+ .|+.|..... +..|...++ ..+. +|||.+++|+. ....+ .+|+-.+. . .-+.|.+... T Consensus 867 G~~sfvdGv~G-kAL~FDGSs~yV~LPn~li~-nS~tdsFTVSFWVK~lge~Ta~ttIISs~dn--n-sGWeIsL~nn-- 939 (1196) T 3v0a_B 867 KDIGLVYGINS-DALYLNGSNQSISFSNDFFE-NGLTNSFSIYFWLRNLGKDTIKSKLIGSKED--N-CGWEIYFQDT-- 939 (1196) T ss_dssp TTCEEEECSSS-EEEEECSSSCCEEEECGGGG-CCSSCCEEEEEEEEECCCCCSCEEEEEEEET--T-EEEEEEEETT-- T ss_pred CCceecCCCcC-ceEEEcCCccEEECCCcccc-cCCCCcEEEEEEeccCCccCccceEEecCCC--C-CCceEEEcCC-- Confidence 35778777554 5899976544 444443332 2234 89999999995 22212 25543332 1 1123444332 Q ss_pred CceeEEEEEEecccccceeEeEeecccCCCCeeEEEEEEe--CCeEEEEEcCccceeecccCCCcccccCCCeeEE-EEe Q FBpp0290336 127 NSYNVSLVYTQADQNIGRKLASFGVAHVPDKWNSIALQVL--SDKVSFYYDCELRNTTLVTREPIELVFDSASTLY-IGQ 203 (1017) Q Consensus 127 ~~~~i~l~Y~~~~~~~~q~~~sF~v~l~Dg~WHrlaLsV~--g~~VtLyVDC~~~~t~~l~r~~~~l~~~~~~~l~-IGq 203 (1017) .+.+...+..+. .+...|. ++..++||||++.+. +..++||||-+++.+..+.... ++ ..+..+. +|. T Consensus 940 ---~L~Ws~~DsnGn--~ksI~~D-dI~~GkW~HVAITyDrsG~aVKLYINGeLVas~sisgll-dI--~ssg~IsFIG~ 1010 (1196) T 3v0a_B 940 ---GLVFNMIDSNGN--EKNIYLS-DVSNNSWHYITISVDRLKEQLLIFIDDNLVANESIKEIL-NI--YSSNIISLLSE 1010 (1196) T ss_dssp ---EEEEEEECTTCC--EEEEEEC-SCCSSSCEEEEEEEETTTTEEEEEETTEEEEEEECTTCC-CC--CCCSEEEECCT T ss_pred ---ceEEEEEeCCCc--cceeecc-CCCCCCeEEEEEEEeCCCCEEEEeECCEEccccccccCc-cc--ccCCceeEecc Confidence 244444433321 2333443 556899999999998 5667999999998876544221 22 1233343 332 Q ss_pred cccccCCccccceeeeEEeeCcccc Q FBpp0290336 204 AGSIIGGKFEGYLEKINVYGNPDAI 228 (1017) Q Consensus 204 ~g~~~~~~F~G~LQ~L~i~~dp~~a 228 (1017) . |.|.|.+|||+..+..+ T Consensus 1011 n-------FnG~IDEVRIYNRALSa 1028 (1196) T 3v0a_B 1011 N-------NPSYIEGLTILNKPTTS 1028 (1196) T ss_dssp T-------CCEEEEEEEEESSCCCH T ss_pred c-------CCcEeeeEEEECCcCCH Confidence 1 99999999999887544No 43>2wjs_A Laminin subunit alpha-2; integrin, secreted, coiled coil, glycoprotein, laminin EGF-like domain, extracellular matrix, laminin G-like domain; HET: NAG; 2.80A {Mus musculus} Probab=97.06 E-value=0.0068 Score=73.79 Aligned_cols=126 Identities=18% Similarity=0.283 Sum_probs=80.9 Q ss_pred ceEEEEEEeecCCCCceEEEEEeCCCCeeEEEEEEcccccCceeEEEEEEecccccceeEeEeecccCCCCeeEEEEEEe Q FBpp0290336 87 EFAILITFRQSSLKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLASFGVAHVPDKWNSIALQVL 166 (1017) Q Consensus 87 eFSll~TlR~~~~~~g~LfsI~~~~~~~~qlgL~ls~~~~~~~~i~l~Y~~~~~~~~q~~~sF~v~l~Dg~WHrlaLsV~ 166 (1017) .++|.+.||... ..|.||...+. +...+|.|+|..- .|.|.|.-..+. ..+.-...+.|++||+|.|... T Consensus 226 ~~~isl~FrT~~-~~GlLl~~~~~-~~~d~l~L~L~~G-----~l~~~~~~g~~~---~~l~~~~~lnDg~WH~V~v~~~ 295 (608) T 2wjs_A 226 ISTVMFKFRTFS-SSALLMYLATR-DLKDFMSVELSDG-----HVKVSYDLGSGM---TSVVSNQNHNDGKWKAFTLSRI 295 (608) T ss_dssp EEEEEEEEEESC-SEEEEEEEECT-TSSSEEEEEEETT-----EEEEEEECSSCE---EEEEEEEECCSSSCEEEEEEEE T ss_pred cceEEEEEEeCC-CCeEEEEecCC-CCCceEEEEEECC-----EEEEEEECCCCc---eEeecCccccCCCeEEEEEEEc Confidence 477777777544 56788887764 4457888888654 367777543221 1222345678999999999999 Q ss_pred CCeEEEEE-cCcccee----ecccCCCcccccCCCeeEEEEeccc-------ccCCccccceeeeEEe Q FBpp0290336 167 SDKVSFYY-DCELRNT----TLVTREPIELVFDSASTLYIGQAGS-------IIGGKFEGYLEKINVY 222 (1017) Q Consensus 167 g~~VtLyV-DC~~~~t----~~l~r~~~~l~~~~~~~l~IGq~g~-------~~~~~F~G~LQ~L~i~ 222 (1017) ++.++|.| ||..... ...+.....+.+.....+|||-.-. .....|.|=|++|+|- T Consensus 296 ~~~~~l~vdd~~~~~~~~~~~~~~g~~~~l~l~~~~~lylGG~p~~~~~~~~~~~~~F~GCi~~v~in 363 (608) T 2wjs_A 296 QKQANISIVDIDSNQEENVATSSSGNNFGLDLKADDKIYFGGLPTLRNLRPEVNVKKYSGCLKDIEIS 363 (608) T ss_dssp TTEEEEEEEETTTCCEEEEEEECCSSCCCCCCCTTCEEEESCCCCCSCCCTTCCCCCCEEEEEEEEET T ss_pred ccEEEEEEEeccCCcccccccccCCcccccccCCCceEEEcCcccccccCccccccCcCccccccEEC Confidence 99999998 6653221 1112122234444457899986411 1123599999999884No 44>3pme_A Type C neurotoxin; structural genomics, seattle structural genomics center for infectious disease, ssgcid, botulinum neurotoxin; 1.56A {Clostridium botulinum} SCOP: b.29.1.0 b.42.4.0 PDB: 4f83_A* 3ogg_A 3n7j_A 3obr_A 3obt_A* 3rmx_A 3rmy_A Probab=97.06 E-value=0.0077 Score=68.65 Aligned_cols=167 Identities=13% Similarity=0.195 Sum_probs=102.2 Q ss_pred CcEEEeccCCCCcceEEcCCCc---cCCCcccccCCcCC-ceEEEEEEeecCCCC--ceEEEEEeCCCCeeEEEEEEccc Q FBpp0290336 51 AGIEFGEAEDGFPAFRFLQTAD---VKSPYRMLLPEKLY-EFAILITFRQSSLKG--GYLFSVVNPLDTVVQLGVHLSPV 124 (1017) Q Consensus 51 ~GV~~v~G~d~~pAy~f~~~a~---l~~pt~~~fP~~~~-eFSll~TlR~~~~~~--g~LfsI~~~~~~~~qlgL~ls~~ 124 (1017) ..|+++.| -..||.|..... |.+ +..++-+.++ +|||.+++|..+.+. --.++|.+......-..|.+... T Consensus 31 G~v~~~~G--~g~A~~L~gs~~~~~i~~-~ndii~n~~~nsFSIsFWvr~~k~~t~~~~~~tIin~k~~nsGW~Isl~~n 107 (420) T 3pme_A 31 GDVQVNTI--YTNDFKLSSSGDKIIVNL-NNNILYSAIYENSSVSFWIKISKDLTNSHNEYTIINSIKQNSGWKLCIRNG 107 (420) T ss_dssp SCCEESSS--STTEEEECSTTCEEEEEC-CGGGGSSGGGTEEEEEEEEEECHHHHTCCSEEEEEEEEETTEEEEEEEETT T ss_pred CceEEEec--CCcEEEecCCCccEEEec-CcchhhccccCceEEEEEEECCCccccCCCceEeEeeccCCCCeEEEECCC Confidence 55788888 468899876655 433 3444566677 999999999865411 23444443322223344444433 Q ss_pred ccCceeEEEEEEecccccceeEeEee----cccC--CCCeeEEEEEEe-CCeEEEEEcCccceeecccCCCcccccCCCe Q FBpp0290336 125 VKNSYNVSLVYTQADQNIGRKLASFG----VAHV--PDKWNSIALQVL-SDKVSFYYDCELRNTTLVTREPIELVFDSAS 197 (1017) Q Consensus 125 ~~~~~~i~l~Y~~~~~~~~q~~~sF~----v~l~--Dg~WHrlaLsV~-g~~VtLyVDC~~~~t~~l~r~~~~l~~~~~~ 197 (1017) .+.+-..+.. ..++...|. ..+. .++||+|+++|. -..+++|+|-+++.+..+.-. -.+ -.+. T Consensus 108 -----~liw~l~dsn--gn~~~i~f~y~~~~~I~d~~nkW~~VtIs~Drlg~~~IYING~lv~sk~I~~l-g~I--~~sn 177 (420) T 3pme_A 108 -----NIEWILQDIN--RKYKSLIFDYSESLSHTGYTNKWFFVTITNNIMGYMKLYINGELKQSERIEDL-DEV--KLDK 177 (420) T ss_dssp -----EEEEEEECTT--SCEEEEEEECSTTTCTTSCTTSCEEEEEEEETTSEEEEEETTEEEEEEECTTS-CCC--CCCS T ss_pred -----eEEEEEEecC--CceeeEEEecccccccccccCceEEEEEEECCCCCEEEEECCEEeeecchhhc-ccc--ccCC Confidence 2333333322 233444553 2222 389999999999 567799999999999876532 122 2233 Q ss_pred eEEEEecccccCCccccceeeeEEeeCccccccc Q FBpp0290336 198 TLYIGQAGSIIGGKFEGYLEKINVYGNPDAINVT 231 (1017) Q Consensus 198 ~l~IGq~g~~~~~~F~G~LQ~L~i~~dp~~a~~~ 231 (1017) .+-++-.+ .....+++.|.+|+|+..+-...|. T Consensus 178 ~i~l~v~~-~~d~~~~~~Id~f~Ifnk~Lt~~EI 210 (420) T 3pme_A 178 TIVFGIDE-NIDENQMLWIRDFNIFSKELSNEDI 210 (420) T ss_dssp EEEESCCS-CCCTTCCEEEEEEEEESSCCCHHHH T ss_pred eEEEEEcc-cCCCccceeeeeEEEecccCCHHHH Confidence 44454432 2345688999999999988665444No 45>3rsj_A BONT/F; clostridium botulinum type F, ganglioside binding site, GD1A; HET: NGA GAL SIA; 2.00A {Clostridium botulinum} SCOP: b.29.1.0 b.42.4.0 PDB: 3fuq_A Probab=97.03 E-value=0.034 Score=62.98 Aligned_cols=165 Identities=8% Similarity=0.116 Sum_probs=103.8 Q ss_pred CCcEEEeccCCCCcceEEcCCCc----cCCCcccccCCcCC-ceEEEEEEeecCCC-------CceEEEEEeCCCCeeEE Q FBpp0290336 50 FAGIEFGEAEDGFPAFRFLQTAD----VKSPYRMLLPEKLY-EFAILITFRQSSLK-------GGYLFSVVNPLDTVVQL 117 (1017) Q Consensus 50 ~~GV~~v~G~d~~pAy~f~~~a~----l~~pt~~~fP~~~~-eFSll~TlR~~~~~-------~g~LfsI~~~~~~~~ql 117 (1017) ...|.+|.| . .-|+.|..... |.+ +..++-+.++ +|||.+++|..+.. .-.||.-.+. ++. -. T Consensus 29 ~g~v~lv~g-~-~~a~~L~~s~~s~i~I~~-~ndii~n~~~~nFSIsFWvri~k~~t~~n~~~e~tII~~~~~-nNs-GW 103 (413) T 3rsj_A 29 NGDVYIYST-N-RNQFGIYSSKPSEVNIAQ-NNDIIYNGRYQNFSISFWVRIPKYFNKVNLNNEYTIIDCIRN-NNS-GW 103 (413) T ss_dssp EECCEECSS-C-TTEEEEESSSSEEEEEEC-CTTTCCCCSSCCEEEEEEEECCCCCSGGGTTCCEEEEEEEET-TTE-EE T ss_pred CCceEEEec-C-CcEEEEccCCCcceEEec-CcceeeccccCcEEEEEEEEcCCcccccccCCcceEEEeeec-CCC-Cc Confidence 356888888 3 56677755444 443 3445556677 99999999986552 2458877753 332 22 Q ss_pred EEEEcccccCceeEEEEEEecccccceeEeEee----cccC--CCCeeEEEEEEe-CCeEEEEEcCccceeecccCCCcc Q FBpp0290336 118 GVHLSPVVKNSYNVSLVYTQADQNIGRKLASFG----VAHV--PDKWNSIALQVL-SDKVSFYYDCELRNTTLVTREPIE 190 (1017) Q Consensus 118 gL~ls~~~~~~~~i~l~Y~~~~~~~~q~~~sF~----v~l~--Dg~WHrlaLsV~-g~~VtLyVDC~~~~t~~l~r~~~~ 190 (1017) .|.+... .+.+-..+.. ..++.+-|. +.+. -++||.|+++|. -....+|||-+++.+..+.... + T Consensus 104 ~Isl~~n-----~liWtl~Ds~--g~~k~i~f~y~~~~~i~dyiNkW~~VtIt~dRlg~a~IYINGkLi~~~~I~~l~-~ 175 (413) T 3rsj_A 104 KISLNYN-----KIIWTLQDTA--GNNQKLVFNYTQMISISDYINKWIFVTITNNRLGNSRIYINGNLIDEKSISNLG-D 175 (413) T ss_dssp EEEEETT-----EEEEEEECTT--SCEEEEEEECCSBSSSCSSTTSEEEEEEEECTTSEEEEEETTEEEEEEECTTCC-C T ss_pred EEEECCC-----eEEEEEEcCC--CcceeEEEecccccchhhccCceEEEEEEEcCCCceEEEECCEEeeccChhhhc-c Confidence 2334332 2344443332 233555564 2222 389999999999 6788999999999987665332 2 Q ss_pred cccCCCeeEEEEecccccCCccccceeeeEEeeCccccccc Q FBpp0290336 191 LVFDSASTLYIGQAGSIIGGKFEGYLEKINVYGNPDAINVT 231 (1017) Q Consensus 191 l~~~~~~~l~IGq~g~~~~~~F~G~LQ~L~i~~dp~~a~~~ 231 (1017) +..+..+.++--+ ..+.+| +.|.+|+|+..+-...|. T Consensus 176 --I~ss~~I~~~vd~-~~d~~~-~~Id~l~If~k~Lt~~EI 212 (413) T 3rsj_A 176 --IHVSDNILFKIVG-CNDTRY-VGIRYFKVFDTELGKTEI 212 (413) T ss_dssp --CCCCSEEEEEEES-CCSSCE-EEEEEEEEESSCCCHHHH T ss_pred --eeecCeEEEEecc-cCCCce-EEEeeEEEecccCCHHHH Confidence 2235566666432 233477 999999999988655443No 46>3n7l_A Neurotoxin; HCR/D-SA, ganglioside binding loop; 2.00A {Clostridium botulinum} SCOP: b.29.1.0 b.42.4.0 PDB: 3azw_A 3azv_A 4isr_A 4isq_A 3n7m_A 4fvv_A* 3n7k_A 3r4s_A* 3r4u_A Probab=97.02 E-value=0.0026 Score=73.78 Aligned_cols=163 Identities=13% Similarity=0.197 Sum_probs=91.3 Q ss_pred CcEEEeccCCCCcceEEcCCCc------cCCCcccccCCcCC-ceEEEEEEeecC---C-CCceEEEEEeCCCCeeEEEE Q FBpp0290336 51 AGIEFGEAEDGFPAFRFLQTAD------VKSPYRMLLPEKLY-EFAILITFRQSS---L-KGGYLFSVVNPLDTVVQLGV 119 (1017) Q Consensus 51 ~GV~~v~G~d~~pAy~f~~~a~------l~~pt~~~fP~~~~-eFSll~TlR~~~---~-~~g~LfsI~~~~~~~~qlgL 119 (1017) ..|+++.| ...|+.|..... |..|.. ++-+.+. +|||.+++|+.. . ....||...+. . .-+.+ T Consensus 32 g~v~~~~G--~g~Al~l~g~~~~~s~v~V~lPn~-li~n~~~~~FTVSfWVK~~~~~t~~~~~~If~~~~~--~-sGW~I 105 (424) T 3n7l_A 32 GNVQLNPI--FPFDFKLGSSGDDRGKVIVTQNEN-IVYNAMYESFSISFWIRINKWVSNLPGYTIIDSVKN--N-SGWSI 105 (424) T ss_dssp SBCEECSS--TTCCEEEESCSTTBCEEEEECCHH-HHHTTTTTEEEEEEEEEEETCCTTCCCEEEEEEESS--S-CEEEE T ss_pred CceEEecC--CCcEEEEccCCCccceEEEECChH-HhcccCCCcEEEEEEeccccccCCCCccEEEeccCC--C-CCeEE Confidence 45888888 456888865432 344433 2223455 899999999876 2 23456666542 2 22344 Q ss_pred EEcccccCceeEEEEEEecccccceeEeEe------ecccCCCCeeEEEEEEe-CCeEEEEEcCccceeecccCCCcccc Q FBpp0290336 120 HLSPVVKNSYNVSLVYTQADQNIGRKLASF------GVAHVPDKWNSIALQVL-SDKVSFYYDCELRNTTLVTREPIELV 192 (1017) Q Consensus 120 ~ls~~~~~~~~i~l~Y~~~~~~~~q~~~sF------~v~l~Dg~WHrlaLsV~-g~~VtLyVDC~~~~t~~l~r~~~~l~ 192 (1017) .+... .+.+...+..+. .+...| .+++. ++||+|++.+. ...++||||-+++.+..+.... .+. T Consensus 106 ~l~~n-----~l~ws~~d~~G~--~~~iwfdy~~~~~~~l~-n~W~HVAvTyD~~g~~kiYINGelv~s~~i~~~~-~i~ 176 (424) T 3n7l_A 106 GIISN-----FLVFTLKQNENS--EQDINFSYDISKNAAGY-NKWFFVTITTNMMGNMMIYINGKLIDTIKVKELT-GIN 176 (424) T ss_dssp EEETT-----EEEEEEEEETTE--EEEEEEECCGGGCTTCC-CSCEEEEEEEETTSEEEEEETTEEEEEEECCCCT-TCC T ss_pred EeCCC-----ceEEEEecCCCc--cceeeecccccccCCCC-CceEEEEEEECCCCCEEEEECCEEeeeeeecccc-ccc Confidence 44322 233333332211 121222 23455 99999999999 6788999999988775432111 111 Q ss_pred cCCCeeEE------EEeccccc-CCccccceeeeEEeeCcccccc Q FBpp0290336 193 FDSASTLY------IGQAGSII-GGKFEGYLEKINVYGNPDAINV 230 (1017) Q Consensus 193 ~~~~~~l~------IGq~g~~~-~~~F~G~LQ~L~i~~dp~~a~~ 230 (1017) +...-.+. ||+. .. +..|.|.|.+|||+..+..+++ T Consensus 177 ~~~~i~~~~g~~~~iG~~--~~~d~~f~G~IDE~RIynrALTaeE 219 (424) T 3n7l_A 177 FSKTITFQMNKIPNTGLI--TSDSDNINMWIRDFYIFAKELDDKD 219 (424) T ss_dssp CCSEEEEEEEECTTSCCC--C----CCEEEEEEEEEESSCCCHHH T ss_pred cCceeeeccCcceeeccc--ccCCCCCcEEEeEEEEECCcCCHHH Confidence 11101112 2222 11 3458899999999999765544No 47>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A* Probab=96.91 E-value=0.0081 Score=79.26 Aligned_cols=122 Identities=15% Similarity=0.143 Sum_probs=80.9 Q ss_pred EEEEEEeecCCCCceEEEEEeCCCCeeEEEEEEcccccCceeEEEEEEecccccceeEeEe-ecccCCCCeeEEEEEEeC Q FBpp0290336 89 AILITFRQSSLKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLASF-GVAHVPDKWNSIALQVLS 167 (1017) Q Consensus 89 Sll~TlR~~~~~~g~LfsI~~~~~~~~qlgL~ls~~~~~~~~i~l~Y~~~~~~~~q~~~sF-~v~l~Dg~WHrlaLsV~g 167 (1017) .|.+.|| ++...++||.|.+......+|.|.|..- .|.|.|..... ...+.+ ...+.||+||+|.|.-.+ T Consensus 1084 ~i~l~fr-T~~~~g~Ll~~~s~~~~~~~l~l~l~~G-----~l~~~~~~g~~---~~~~~~~~~~v~DG~wH~v~~~r~~ 1154 (1245) T 3qcw_A 1084 RLAIGFS-TVQKEAVLVRVDSSSGLGDYLELHIHQG-----KIGVKFNVGTD---DIAIEESNAIINDGKYHVVRFTRSG 1154 (1245) T ss_dssp EEEEEEE-BCCSSEEEEEEEECTTCCCEEEEEEETT-----EEEEEEESSSC---CEEEECCSCCCBSSSCEEEEEEEET T ss_pred eEEEEEE-EecCCeEEEEEeccCCCCceEEEEEECC-----EEEEEEECCCC---ceEeecCceEcCCCcEEEEEEEEcC Confidence 4555555 4466789999987543356778877643 37777764321 223333 467889999999999999 Q ss_pred CeEEEEEcCccceeecccCCCcccccCCCeeEEEEecccccCCccccceeeeEEe Q FBpp0290336 168 DKVSFYYDCELRNTTLVTREPIELVFDSASTLYIGQAGSIIGGKFEGYLEKINVY 222 (1017) Q Consensus 168 ~~VtLyVDC~~~~t~~l~r~~~~l~~~~~~~l~IGq~g~~~~~~F~G~LQ~L~i~ 222 (1017) ..++|+||=..+.+. +........+.....||||.. .....|+|-|+.++|- T Consensus 1155 ~~~~l~VD~~~~~~~-~~~g~~~~~~~~~~~l~lGg~--~~~~~F~Gcl~~v~~n 1206 (1245) T 3qcw_A 1155 GNATLQVDSWPVIER-YPAGRQLTIFNSQATIIIGGK--EQGQPFQGQLSGLYYN 1206 (1245) T ss_dssp TEEEEEETTSCCEEE-CCCSCCCCCBCSEEEEEESST--TTTCCCCEEEEEEEET T ss_pred CEEEEEECCccceee-cCCCcceEEeecCCeEEECCc--cCCCCceEEEeEEEEC Confidence 999999998765442 221111112334578999865 2346799999999873No 48>2nyy_A Botulinum neurotoxin type A; botulinum, neurotoxin, FAB, protein antibody complex, toxin- system complex; 2.61A {Clostridium botulinum} SCOP: b.29.1.6 b.42.4.2 d.92.1.7 h.4.2.1 PDB: 2nz9_A 3bta_A 3v0a_A* 3v0b_A 3v0c_A 3zus_A 3zur_A Probab=96.74 E-value=0.034 Score=69.94 Aligned_cols=168 Identities=8% Similarity=0.129 Sum_probs=102.6 Q ss_pred CCcEEEeccCCCCcceEEcCCCc----cCCCcccccCCcCC-ceEEEEEEeecCCCCc----eEEEEEeCCCCeeEEEEE Q FBpp0290336 50 FAGIEFGEAEDGFPAFRFLQTAD----VKSPYRMLLPEKLY-EFAILITFRQSSLKGG----YLFSVVNPLDTVVQLGVH 120 (1017) Q Consensus 50 ~~GV~~v~G~d~~pAy~f~~~a~----l~~pt~~~fP~~~~-eFSll~TlR~~~~~~g----~LfsI~~~~~~~~qlgL~ 120 (1017) ...|+++.| -..||.|..... |.+ ...++-+.++ +|||.+|+|..+.+.. -.++|.+......-+.+. T Consensus 900 ~G~V~~v~G--ngnA~~L~gs~~S~~~I~~-~ndii~n~~~~nFSISFWvRipk~~~~~n~~~eyTIIn~k~nNsGW~I~ 976 (1295) T 2nyy_A 900 GSKVNFDPI--DKNQIQLFNLESSKIEVIL-KNAIVYNSMYENFSTSFWIRIPKYFNSISLNNEYTIINCMENNSGWKVS 976 (1295) T ss_dssp CTTEEECTT--CTTCEEEESSTTSCEEEEE-CGGGCCTTTTSEEEEEEEEECCCCCSGGGGGCCEEEEEEEETTEEEEEE T ss_pred CCceEEEec--CCcEEEecCCCCcceEEec-CcchhcccccCceEEEEEEEcCCCCcccccCCceeeEeeccCCCCeEEE Confidence 456788887 467888855333 333 4455667778 9999999998766532 245555332222334444 Q ss_pred EcccccCceeEEEEEEecccccceeEeEeec------ccCCCCeeEEEEEEe-CCeEEEEEcCccceeecccCCCccccc Q FBpp0290336 121 LSPVVKNSYNVSLVYTQADQNIGRKLASFGV------AHVPDKWNSIALQVL-SDKVSFYYDCELRNTTLVTREPIELVF 193 (1017) Q Consensus 121 ls~~~~~~~~i~l~Y~~~~~~~~q~~~sF~v------~l~Dg~WHrlaLsV~-g~~VtLyVDC~~~~t~~l~r~~~~l~~ 193 (1017) |... .+.+-..+.. ...+...|.+ +-..++||+|+++|. -...++|+|-+++.+..+.-. ..+. T Consensus 977 L~~n-----~liWtl~DsN--gn~k~i~f~y~~~~~I~dyiNkW~hVTIt~DRlg~a~IYINGkLv~sk~I~~L-g~I~- 1047 (1295) T 2nyy_A 977 LNYG-----EIIWTLQDTQ--EIKQRVVFKYSQMINISDYINRWIFVTITNNRLNNSKIYINGRLIDQKPISNL-GNIH- 1047 (1295) T ss_dssp EETT-----EEEEEEECSS--SCEEEEEEECCSBSSSCSSTTSCEEEEEEEETTSEEEEEETTEEEEEEECTTC-CCCC- T ss_pred eCCC-----cEEEEEEecC--CcceeeEEecccccCcccccCceEEEEEEECCCCCeEEEECCEEeeccccccC-Ccee- Confidence 4433 1333333222 2234444431 111389999999999 467799999999999877543 2332 Q ss_pred CCCeeEEEEecccccCCccccceeeeEEeeCccccccc Q FBpp0290336 194 DSASTLYIGQAGSIIGGKFEGYLEKINVYGNPDAINVT 231 (1017) Q Consensus 194 ~~~~~l~IGq~g~~~~~~F~G~LQ~L~i~~dp~~a~~~ 231 (1017) .+..+.++--+ ..+..|.+.|.+|+|+..+-...+. T Consensus 1048 -ssn~Is~gv~g-~~d~n~~g~ID~F~IfnK~Lt~~EI 1083 (1295) T 2nyy_A 1048 -ASNNIMFKLDG-CRDTHRYIWIKYFNLFDKELNEKEI 1083 (1295) T ss_dssp -CCSEEEEEEES-CCCTTCEEEEEEEEEESSCCCHHHH T ss_pred -ecCeEEEEEec-cCCCCceeeEeeEEEecCcCCHHHH Confidence 24444554222 3456799999999999988555433No 49>1epw_A Bontoxilysin B, botulinum neurotoxin type B; zinc, metalloprotease, transmembrane, hydrolase; 1.90A {Clostridium botulinum} SCOP: b.29.1.6 b.42.4.2 d.92.1.7 h.4.2.1 PDB: 1f31_A* 1g9a_A* 1g9b_A* 1g9c_A* 1g9d_A* 1i1e_A* 1s0b_A 1s0c_A 1s0d_A 1s0e_A 1s0f_A 1s0g_A 2np0_A 3zuq_A 2etf_A 2xhl_A 1z0h_A 4kbb_A* 2nm1_A 1f82_A ... Probab=96.70 E-value=0.042 Score=70.03 Aligned_cols=153 Identities=9% Similarity=0.177 Sum_probs=91.6 Q ss_pred CCcceEEcCCCc----cCCCcccccCCcCC-ceEEEEEEeecCC-CC---------ceEEEEEeCCCCeeEEEEEEcccc Q FBpp0290336 61 GFPAFRFLQTAD----VKSPYRMLLPEKLY-EFAILITFRQSSL-KG---------GYLFSVVNPLDTVVQLGVHLSPVV 125 (1017) Q Consensus 61 ~~pAy~f~~~a~----l~~pt~~~fP~~~~-eFSll~TlR~~~~-~~---------g~LfsI~~~~~~~~qlgL~ls~~~ 125 (1017) ...|+.|..... |..|...++ +... +|||.+++|+... .. ..+|+-.+. ...-++. +... T Consensus 894 ~GkAl~FdGssgS~I~V~LPnnli~-ns~~d~FTISFWVK~~s~~t~~i~~f~~ne~tfIs~~~n-nsGW~IS--Ledn- 968 (1290) T 1epw_A 894 DKNQFKLTSSANSKIRVTQNQNIIF-NSVFLDFSVSFWIRIPKYKNDGIQNYIHNEYTIINCMKN-NSGWKIS--IRGN- 968 (1290) T ss_dssp TTSEEEECSSTTCCEEEECCTTSSC-CCSSCCEEEEEEEECCCCCGGGHHHHHHCEEEEEEEEET-TEEEEEE--EETT- T ss_pred cCceEEecCCCCcceEEEcCccccc-CCCCCCEEEEEEeccccccCccccccccccceEEecccC-CCCceEE--ecCC- Confidence 457888876543 444433222 2234 8999999999775 22 235544432 2222333 3221 Q ss_pred cCceeEEEEEEecccccceeEeEee----cccC--CCCeeEEEEEEeCCeEEEEEcCccceeecccCCCcccccCCCeeE Q FBpp0290336 126 KNSYNVSLVYTQADQNIGRKLASFG----VAHV--PDKWNSIALQVLSDKVSFYYDCELRNTTLVTREPIELVFDSASTL 199 (1017) Q Consensus 126 ~~~~~i~l~Y~~~~~~~~q~~~sF~----v~l~--Dg~WHrlaLsV~g~~VtLyVDC~~~~t~~l~r~~~~l~~~~~~~l 199 (1017) .+.+...+..+ ......|. ..+. .++||+|++++....+++|||-+++.+..+.... .+ .....+ T Consensus 969 ----tL~wsl~DsnG--n~~~Iwfd~~t~~~Ipdy~NkW~HVAITyD~g~vKIYINGeLVas~sitgL~-dI--~ss~~I 1039 (1290) T 1epw_A 969 ----RIIWTLIDING--KTKSVFFEYNIREDISEYINRWFFVTITNNLNNAKIYINGKLESNTDIKDIR-EV--IANGEI 1039 (1290) T ss_dssp ----EEEEEEECTTC--CEEEEEEECCSSCSSCSSTTSCEEEEEEECSSEEEEEETTEEEEEEECSSCC-CC--CCCSEE T ss_pred ----eEEEEEecCCC--CcceeEEecccccCCCCCCCceEEEEEEEcCCeEEEEECCEEeeccccccCc-cc--cccCee Confidence 24444443221 11222332 2222 5999999999999999999999998886544311 22 234578 Q ss_pred EEEecccccCCccccceeeeEEeeCcccc Q FBpp0290336 200 YIGQAGSIIGGKFEGYLEKINVYGNPDAI 228 (1017) Q Consensus 200 ~IGq~g~~~~~~F~G~LQ~L~i~~dp~~a 228 (1017) .+|..+ .....|.|.|.+|||+..+..+ T Consensus 1040 ~LGv~n-~~D~~F~G~IDEfRIYNRALSa 1067 (1290) T 1epw_A 1040 IFKLDG-DIDRTQFIWMKYFSIFNTELSQ 1067 (1290) T ss_dssp EEEEEE-SCCTTCCEEEEEEEEESSCCCH T ss_pred EEEecC-CCCcCcceEeeeEEEECCcCCH Confidence 888763 3345689999999999987554No 50>2vxr_A Botulinum neurotoxin type G; hydrolase, ganglioside, protease, recepto secreted, binding domain, metalloprotease; 1.90A {Clostridium botulinum} SCOP: b.29.1.0 b.42.4.0 PDB: 3mpp_G Probab=96.53 E-value=0.046 Score=62.44 Aligned_cols=165 Identities=12% Similarity=0.196 Sum_probs=100.7 Q ss_pred CCcEEEeccCCCCcceEEcCCCc----cCCCcccccCCcCC-ceEEEEEEeecCC-CC---------ceEEEEEeCCCCe Q FBpp0290336 50 FAGIEFGEAEDGFPAFRFLQTAD----VKSPYRMLLPEKLY-EFAILITFRQSSL-KG---------GYLFSVVNPLDTV 114 (1017) Q Consensus 50 ~~GV~~v~G~d~~pAy~f~~~a~----l~~pt~~~fP~~~~-eFSll~TlR~~~~-~~---------g~LfsI~~~~~~~ 114 (1017) ...|.+|. - ..-||.|..... |.+ ...+|-+.++ +|||.+++|..+. .. -+||.-.+- ... T Consensus 76 ~g~V~lv~-i-n~na~~L~~s~~s~i~I~~-~ndiiyN~~~~nFSIsFWvRipk~~t~~tn~y~~nEyTII~~~~n-NsG 151 (482) T 2vxr_A 76 GSDVIFND-I-GNGQFKLNNSENSNITAHQ-SKFVVYDSMFDNFSINFWVRTPKYNNNDIQTYLQNEYTIISCIKN-DSG 151 (482) T ss_dssp CTTCEEEC-S-TTCEEEEESSTTCCEEEEC-CTTTSCEESSCCEEEEEEEECCCCCGGGHHHHHHCEEEEEEEEET-TEE T ss_pred CCceEEEE-c-cCcEEEecCCCCcceEEEc-ccceeeccccCceEEEEEEEcCCcccccccccccCCceEEEeecC-CCC Confidence 45566666 2 345666654433 333 3445556677 9999999998554 22 257765542 222 Q ss_pred eEEEEEEcccccCceeEEEEEEecccccceeEeEee----cccC--CCCeeEEEEEEe-CCeEEEEEcCccceeecccCC Q FBpp0290336 115 VQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLASFG----VAHV--PDKWNSIALQVL-SDKVSFYYDCELRNTTLVTRE 187 (1017) Q Consensus 115 ~qlgL~ls~~~~~~~~i~l~Y~~~~~~~~q~~~sF~----v~l~--Dg~WHrlaLsV~-g~~VtLyVDC~~~~t~~l~r~ 187 (1017) -+++ +... .|.+-..+. ...++.+-|. +.+. -++||.|+++|. -....+|||-+++.+..+.-. T Consensus 152 W~Is--l~~n-----~LIWtl~Ds--~g~~k~I~f~y~~~~nisdyiNkW~fITITndRlGna~IYINGkLi~~~~I~~L 222 (482) T 2vxr_A 152 WKVS--IKGN-----RIIWTLIDV--NAKSKSIFFEYSIKDNISDYINKWFSITITNDRLGNANIYINGSLKKSEKILNL 222 (482) T ss_dssp EEEE--EETT-----EEEEEEECT--TSCEEEEEEECCSCCSSCSSTTSCEEEEEEECTTSEEEEEETTEEEEEEECTTC T ss_pred cEEE--ECCC-----eEEEEEEcC--CCcceeEEEecccccchhhccCceEEEEEEEcCCCceEEEECCEEeeccChhhh Confidence 3333 4333 234444333 2234555664 2333 389999999999 678899999999988766432 Q ss_pred CcccccCCCeeEEEEecccccCCccccceeeeEEeeCccccccc Q FBpp0290336 188 PIELVFDSASTLYIGQAGSIIGGKFEGYLEKINVYGNPDAINVT 231 (1017) Q Consensus 188 ~~~l~~~~~~~l~IGq~g~~~~~~F~G~LQ~L~i~~dp~~a~~~ 231 (1017) . .+-.+..+.++--+ ..+..|.+.|.+|+|+..+....|. T Consensus 223 ~---~I~~s~~I~fgvdn-~~D~n~~i~Id~l~If~keLt~~EI 262 (482) T 2vxr_A 223 D---RINSSNDIDFKLIN-CTDTTKFVWIKDFNIFGRELNATEV 262 (482) T ss_dssp C---CEECCSEEEEEEES-CCCTTCEEEEEEEEEESSCCCHHHH T ss_pred c---ccccCCeEEEEecc-CCCCCceeEEeeEEEecccCCHHHH Confidence 1 22345566666432 3445689999999999988655443No 51>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A* Probab=96.28 E-value=0.03 Score=73.91 Aligned_cols=121 Identities=16% Similarity=0.269 Sum_probs=79.2 Q ss_pred ceEEEEEEeecCCCCceEEEEEeCCCCeeEEEEEEcccccCceeEEEEEEecccccceeEeE--eecccCCCCeeEEEEE Q FBpp0290336 87 EFAILITFRQSSLKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLAS--FGVAHVPDKWNSIALQ 164 (1017) Q Consensus 87 eFSll~TlR~~~~~~g~LfsI~~~~~~~~qlgL~ls~~~~~~~~i~l~Y~~~~~~~~q~~~s--F~v~l~Dg~WHrlaLs 164 (1017) ++.|.+.||... ..+.||.... +...+|.|+|..- .|.|.|....+. ..++ ....+.|++||+|.|. T Consensus 859 ~~~is~~frT~~-~~GlLl~~~~--~~~dfl~l~L~~G-----~l~~~~~~g~g~---~~~~~~s~~~vnDG~WH~V~~~ 927 (1245) T 3qcw_A 859 SMHLFFQFKTTS-LDGLILYNSG--DGNDFIVVELVKG-----YLHYVFDLGNGA---NLIKGSSNKPLNDNQWHNVMIS 927 (1245) T ss_dssp CEEEEEEEECSC-SCEEEEEEEE--STTCEEEEEEETT-----EEEEEEESSSCC---EEEECCCSSCSCSSSCEEEEEE T ss_pred eEEEEEEEEECC-CCEEEEEeCC--CCCceEEEEEECC-----EEEEEEECCCCc---EEEEecCccccCCCCeEEEEEE Confidence 778888887655 4567775554 2357888888654 377777643322 2222 2567889999999999 Q ss_pred EeCCe-EEEEEcCccceeecccCCCcccccCCCeeEEEEecccc----------cCCccccceeeeEEe Q FBpp0290336 165 VLSDK-VSFYYDCELRNTTLVTREPIELVFDSASTLYIGQAGSI----------IGGKFEGYLEKINVY 222 (1017) Q Consensus 165 V~g~~-VtLyVDC~~~~t~~l~r~~~~l~~~~~~~l~IGq~g~~----------~~~~F~G~LQ~L~i~ 222 (1017) ....+ .+|.||-.......-. ... ++....||||-.... ....|+|=|++|+|- T Consensus 928 ~~~~~~~~L~VD~~~~~~~~~~--~~~--l~~~~~lyvGG~~~~~~~~~~~~~~~~~~F~GCi~~l~in 992 (1245) T 3qcw_A 928 RDTSNLHTVKIDTKITTQITAG--ARN--LDLKSDLYIGGVAKETYKSLPKLVHAKEGFQGCLASVDLN 992 (1245) T ss_dssp ECTTCEEEEEETTEEEEEECCC--CCC--CCEEEEEEESCCCGGGGGGCCTTCCCSSBCCEEEEEEEET T ss_pred EcCCceEEEEECCEeeeeecCC--cce--eccCCCeEEccccccccccchhhcccccCccceecceeEC Confidence 99876 5899998764332211 112 333568999864211 124699999999994No 52>2sli_A Intramolecular trans-sialidase; hydrolase, neuraminidase; HET: SKD; 1.80A {Macrobdella decora} SCOP: b.29.1.9 b.68.1.1 PDB: 1sll_A 1sli_A* 3sli_A* 4sli_A* Probab=96.12 E-value=0.066 Score=66.27 Aligned_cols=136 Identities=16% Similarity=0.177 Sum_probs=86.7 Q ss_pred CCceEEEEEEeecC-CCCceEEEEEeCCC--CeeEEEEEEcccccCceeEEEEEEecccccceeEeEeecc------cCC Q FBpp0290336 85 LYEFAILITFRQSS-LKGGYLFSVVNPLD--TVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLASFGVA------HVP 155 (1017) Q Consensus 85 ~~eFSll~TlR~~~-~~~g~LfsI~~~~~--~~~qlgL~ls~~~~~~~~i~l~Y~~~~~~~~q~~~sF~v~------l~D 155 (1017) |.+|+|.+.||... .+...||++.+... ...+|-|.+... .++.|+.+..+... ...+..+ ..+ T Consensus 34 l~~~Tv~~~~~~~~~~~~~~Lfs~~~~t~~~~n~~~~l~~~~~----g~~~~~v~~~~~~~---~~~~~~~~~~~~~~~~ 106 (679) T 2sli_A 34 MTQGTIILSYKSTSENGIQSLFSVGNSTAGNQDRHFHIYITNS----GGIGIELRNTDGVF---NYTLDRPASVRALYKG 106 (679) T ss_dssp CSSEEEEEEEEECCCCSEEEEEEEECCSTTCTTEEEEEEEETT----SCEEEEEEECTTTC---EEEEEESSCCCSEETT T ss_pred ccccEEEEEEEECCCCCceEEEEecCCCCCCccccEEEEEeCC----CEEEEEEecCCCce---eEEEecCcccceeccC Confidence 44999999999987 44445999996432 236788888653 13666665443211 1122222 124 Q ss_pred C-CeeEEEEEEeC--CeEEEEEcCccceeecccCCCccc-ccCCCeeEEEEecc-c-ccCCccccceeeeEEeeCcccc Q FBpp0290336 156 D-KWNSIALQVLS--DKVSFYYDCELRNTTLVTREPIEL-VFDSASTLYIGQAG-S-IIGGKFEGYLEKINVYGNPDAI 228 (1017) Q Consensus 156 g-~WHrlaLsV~g--~~VtLyVDC~~~~t~~l~r~~~~l-~~~~~~~l~IGq~g-~-~~~~~F~G~LQ~L~i~~dp~~a 228 (1017) + .||+|+++... ..++||||-..+.+..+.. ...+ .+..-..++||+.- . .....|.|.|.++.|+...... T Consensus 107 ~~~w~hv~~t~ds~~g~~~lyvnG~~~~~~~~~~-~~~~~~~~g~~~~~iG~~~~~g~~~~~f~G~I~dv~v~~~~ls~ 184 (679) T 2sli_A 107 ERVFNTVALKADAANKQCRLFANGELLATLDKDA-FKFISDITGVDNVTLGGTKRQGKIAYPFGGTIGDIKVYSNALSD 184 (679) T ss_dssp EECCEEEEEEEETTTTEEEEEETTEEEEEEECSS-CCCGGGSTTCCEEEESSEEETTEEESCCCEEEEEEEEESSCCCH T ss_pred CCceEEEEEEEecCCCeEEEEECCEEEEeccCCc-ceeeccCCCcceEEECCeeCCCcccceEeeEEEEEEEcCCCCCH Confidence 3 79999999965 5899999999987755532 1111 12234589999841 1 1122499999999999876544No 53>3ffz_A Botulinum neurotoxin type E; botulinum neurotoxin serotype E, botulism, domain organization, endopeptidase, translocation, hydrolase; 2.65A {Clostridium botulinum} Probab=95.08 E-value=0.61 Score=59.00 Aligned_cols=164 Identities=8% Similarity=0.065 Sum_probs=96.2 Q ss_pred CcEEEeccCCCCcceEEcCCCc----cCCCcccccCCcCC-ceEEEEEEeecCCC-------C-ceEEEEEeCCCCeeEE Q FBpp0290336 51 AGIEFGEAEDGFPAFRFLQTAD----VKSPYRMLLPEKLY-EFAILITFRQSSLK-------G-GYLFSVVNPLDTVVQL 117 (1017) Q Consensus 51 ~GV~~v~G~d~~pAy~f~~~a~----l~~pt~~~fP~~~~-eFSll~TlR~~~~~-------~-g~LfsI~~~~~~~~ql 117 (1017) ..|.+|.| . .-|+.|..... +.+ ...+|-+.++ +|||.+|+|....+ + -.||.-.+. ++. -. T Consensus 876 g~V~lv~G-n-~na~~L~ss~~s~~~I~~-~ndii~n~~~~nFSIsFWvRipk~~~~~~n~~neyTII~~~~~-nNs-GW 950 (1252) T 3ffz_A 876 GDVYKYPT-N-KNQFGIYNDKLSEVNISQ-NDYIIYDNKYKNFSISFWVRIPNYDNKIVNVNNEYTIINCMRD-NNS-GW 950 (1252) T ss_dssp ECCEECTT-C-TTCEEEESSSCEEEEEEC-CTTTSCCSSCCCCEEEEEEECCCCCSTTTCCCCCEEEEEEEET-TTE-EE T ss_pred CceEEEec-C-CceEEeccCCCCceEEec-CcceeeccccCceEEEEEEEcCCcCCcccccCCcceEEEeecC-CCC-Cc Confidence 45667676 3 45666654332 443 3445556677 99999999984441 1 347766633 222 22 Q ss_pred EEEEcccccCceeEEEEEEecccccceeEeEeecccC------CCCeeEEEEEEe-CCeEEEEEcCccceeecccCCCcc Q FBpp0290336 118 GVHLSPVVKNSYNVSLVYTQADQNIGRKLASFGVAHV------PDKWNSIALQVL-SDKVSFYYDCELRNTTLVTREPIE 190 (1017) Q Consensus 118 gL~ls~~~~~~~~i~l~Y~~~~~~~~q~~~sF~v~l~------Dg~WHrlaLsV~-g~~VtLyVDC~~~~t~~l~r~~~~ 190 (1017) .+.+... .+.+-..+.. ..++.+-|.+.++ -++||.|+++|. -....+|+|-+++.+..+... .+ T Consensus 951 ~I~l~~n-----~LiWtl~Dsn--gn~k~i~f~y~~~~~i~dyiNkW~fITIt~dRlg~a~IYINGkLi~~~~I~~l-~~ 1022 (1252) T 3ffz_A 951 KVSLNHN-----EIIWTLQDNA--GINQKLAFNYGNANGISDYINKWIFVTITNDRLGDSKLYINGNLIDQKSILNL-GN 1022 (1252) T ss_dssp EEEEETT-----EEEEEEECSS--SCEEEEEEECCCCSBCCSSTTSCEEEEEEECTTSEEEEEETTEEEEEEECTTC-CC T ss_pred EEEeCCC-----eEEEEEEcCC--CcceeEEEecccccccccccCceEEEEEEEcCCCceeEEECCEEeeccchhhc-cc Confidence 2333322 2333333322 2335555542211 389999999999 577899999999998766532 22 Q ss_pred cccCCCeeEEEEecccccCCccccceeeeEEeeCccccccc Q FBpp0290336 191 LVFDSASTLYIGQAGSIIGGKFEGYLEKINVYGNPDAINVT 231 (1017) Q Consensus 191 l~~~~~~~l~IGq~g~~~~~~F~G~LQ~L~i~~dp~~a~~~ 231 (1017) +..+..+.++=-+.. +. ..+.|.+|+|+..+-...+. T Consensus 1023 --I~ss~~I~~kl~g~n-d~-~~v~Id~l~If~k~Lt~~EI 1059 (1252) T 3ffz_A 1023 --IHVSDNILFKIVNCS-YT-RYIGIRYFNIFDKELDETEI 1059 (1252) T ss_dssp --CCCCSEEEEEEESCS-SC-CEEEEEEEEEESSCCCHHHH T ss_pred --ceecCeEEEEecCCC-CC-cceeEeeeEeecCcCCHHHH Confidence 233555555333322 22 46899999999988655443No 54>4b1m_A Levanase; hydrolase, CBM66; HET: FRU; 1.10A {Bacillus subtilis} PDB: 4b1l_A* 4azz_A Probab=94.23 E-value=0.22 Score=51.11 Aligned_cols=89 Identities=12% Similarity=0.114 Sum_probs=58.8 Q ss_pred ceEEEEEEeecC----CCCceEEEEEeCCCCeeEEEEEEcccccCceeEEEEEEecccccceeEeEeecccCCCCeeEEE Q FBpp0290336 87 EFAILITFRQSS----LKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLASFGVAHVPDKWNSIA 162 (1017) Q Consensus 87 eFSll~TlR~~~----~~~g~LfsI~~~~~~~~qlgL~ls~~~~~~~~i~l~Y~~~~~~~~q~~~sF~v~l~Dg~WHrla 162 (1017) +|.|-+.+|... .+.+++|.+.. +....+.+.+... ...+.|+ ...++. ...++.....+..++|+++. T Consensus 65 df~l~~e~k~~~~~~~~nsGi~~r~~~--d~~~~Y~~~i~~~---~~~~~l~-~~~~g~-~~~l~~~~~~~~~g~W~~~~ 137 (185) T 4b1m_A 65 DFTYESDITIKDGNGRGAGALMFRSDK--DAKNGYLANVDAK---HDLVKFF-KFENGA-ASVIAEYKTPIDVNKKYHLK 137 (185) T ss_dssp SEEEEEEEEEEEEEEEEEEEEEEEECT--TSSSEEEEEEETT---TTEEEEE-EEETTE-EEEEEEEECCCCSSCCEEEE T ss_pred CEEEEEEEEEccCCCCccEEEEEEecC--CCCCeEEEEEECC---CCEEEEE-EecCCc-eeEeeeccccCCCCCeEEEE Confidence 999999999865 46678887632 3345666666654 1234443 222221 11233333445579999999 Q ss_pred EEEeCCeEEEEEcCccceee Q FBpp0290336 163 LQVLSDKVSFYYDCELRNTT 182 (1017) Q Consensus 163 LsV~g~~VtLyVDC~~~~t~ 182 (1017) |.|.+++|++|||-+++.+. T Consensus 138 I~~~G~~i~v~vNG~~v~~~ 157 (185) T 4b1m_A 138 TEAEGDRFKIYLDDRLVIDA 157 (185) T ss_dssp EEEETTEEEEEETTEEEEEE T ss_pred EEEECCEEEEEECCEEEEEE Confidence 99999999999999887654No 55>1ei8_A Collagen-like peptide (Pro-HYP-Gly)4-PG-(Pro-HYP- Gly)5; triple helix, contractIle protein; 2.00A {Synthetic} SCOP: k.3.1.1 Probab=89.01 E-value=0.64 Score=33.59 Aligned_cols=12 Identities=92% Similarity=2.189 Sum_probs=4.6 Q ss_pred CCCCCCCCCCCC Q FBpp0290336 324 PPGPPGPPGPKG 335 (1017) Q Consensus 324 ~pGppGppGp~G 335 (1017) ++|++|++|++| T Consensus 15 ~pG~~G~pG~~G 26 (29) T 1ei8_A 15 PPGPPGPPGPPG 26 (29) T ss_dssp CCCCCCCCCCCC T ss_pred CCCCCCCCCCCC Confidence 333333333333No 56>4ccd_A Galactocerebrosidase; hydrolase, krabbe disease, glycosyl hydrolase, galactosidase D-galactal, lysosomal storage disease, enzyme-intermediate; HET: 2DG NAG; 1.97A {Mus musculus} PDB: 4ccc_A* 4cce_A* 4ufh_A* 4ufi_A* 4ufj_A* 4ufk_A* 4ufl_A* 4ufm_A* 3zr5_A* 3zr6_A* Probab=88.18 E-value=3.6 Score=50.70 Aligned_cols=88 Identities=7% Similarity=-0.072 Sum_probs=57.3 Q ss_pred ceEEEEEEeecCC-CC--ceEEEEEeCC---CCeeEEEEEEcccccCceeEEEEEEecccccceeEeEeecccCCCCeeE Q FBpp0290336 87 EFAILITFRQSSL-KG--GYLFSVVNPL---DTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLASFGVAHVPDKWNS 160 (1017) Q Consensus 87 eFSll~TlR~~~~-~~--g~LfsI~~~~---~~~~qlgL~ls~~~~~~~~i~l~Y~~~~~~~~q~~~sF~v~l~Dg~WHr 160 (1017) ||+|-+.+|.... .. +.+|.+.+.. +....+.+.|... + ++.|.. ..++ ...+++-.+.+..++||+ T Consensus 528 Dy~v~~dv~~~~~~~g~agl~fR~~~~G~~~~~~~gY~~~i~~~--G--~~~l~k-~~~g--~~~La~~~~~~~~~~w~~ 600 (654) T 4ccd_A 528 NMTVQCDVYIETPRSGGVFIAGRVNKGGILIRSATGVFFWIFAN--G--SYRVTA-DLGG--WITYASGHADVTAKRWYT 600 (654) T ss_dssp EEEEEEEEEECSTTTCEEEEEEEECCCGGGGGGCEEEEEEEETT--T--EEEEEE-ETTC--CSEEEEEECSCCTTCEEE T ss_pred cEEEEEEEEeccCCCCeEEEEEEEcCCCCCccccceEEEEEeCC--C--eEEEEE-ecCC--eEEEEeeeccCCCCceEE Confidence 9999999998763 22 2455554421 1235566666543 1 244443 3332 224444455777899999 Q ss_pred EEEEEeCCeEEEEEcCcccee Q FBpp0290336 161 IALQVLSDKVSFYYDCELRNT 181 (1017) Q Consensus 161 laLsV~g~~VtLyVDC~~~~t 181 (1017) |.|.|.+++|++|||-+++.+ T Consensus 601 l~v~v~G~~I~v~vdG~~v~~ 621 (654) T 4ccd_A 601 LTLGIKGYFAFGMLNGTILWK 621 (654) T ss_dssp EEEEEETTEEEEEETTEEEEE T ss_pred EEEEEECCEEEEEECCEEEEE Confidence 999999999999999977655No 57>1ms9_A Trans-sialidase; trans-glycosylation, protein-acrbohydrate interac beta-propeller, hydrolase; HET: LAT; 1.58A {Trypanosoma cruzi} SCOP: b.29.1.15 b.68.1.1 PDB: 1ms0_A* 1mr5_A* 1ms1_A 1ms4_A 1ms8_A* 1ms3_A* 2ah2_A* 3b69_A* 3opz_A 3pjq_A* 1s0i_A* 1s0j_A* 1ms5_A 1wcs_A 2ags_A* 2a75_A* 2fhr_A* 1n1t_A* 1n1s_A* 1n1v_A* ... Probab=87.75 E-value=8.1 Score=47.56 Aligned_cols=127 Identities=13% Similarity=0.122 Sum_probs=71.2 Q ss_pred ceEEEEEEeecC--CCCceEEEEE-eCCCCeeEEEEEEcccccCceeEEEEEEecccccceeEeEeecccCCCCeeEEEE Q FBpp0290336 87 EFAILITFRQSS--LKGGYLFSVV-NPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLASFGVAHVPDKWNSIAL 163 (1017) Q Consensus 87 eFSll~TlR~~~--~~~g~LfsI~-~~~~~~~qlgL~ls~~~~~~~~i~l~Y~~~~~~~~q~~~sF~v~l~Dg~WHrlaL 163 (1017) +|+|+||+-... +..-.|+.+. +...+...|+|..+.. + + ..+.|.... .. . ...---++=|+++| T Consensus 495 ~ftlvatv~i~~~p~~~~pl~g~~~~~~~~~~~~glsy~~~-~-~--w~~~~~~~~--~~-~----~~~w~~~~~~qv~l 563 (648) T 1ms9_A 495 AFTLVASVTIHEVPKGASPLLGASLDSSGGKKLLGLSYDKR-H-Q--WQPIYGSTP--VT-P----TGSWEMGKRYHVVL 563 (648) T ss_dssp EEEEEEEEEECSCCSSCEEEEEEESSSSSSSEEEEEEECTT-S-C--EEEEETTSC--CC-C----BSCCCTTCEEEEEE T ss_pred cEEEEEEEEEecCCCCCCceeEEEeccCCCcEEEEEEEeCC-C-c--EEEEeCCCC--cc-c----cccccCCceEEEEE Confidence 999999998743 3222344443 2223344555555432 1 2 223332111 00 0 01112356699999 Q ss_pred EEeCCeEEEEEcCccce-e--ecccCCCcccccCCCeeEEEEeccccc-CCccccceeeeEEeeCcccc Q FBpp0290336 164 QVLSDKVSFYYDCELRN-T--TLVTREPIELVFDSASTLYIGQAGSII-GGKFEGYLEKINVYGNPDAI 228 (1017) Q Consensus 164 sV~g~~VtLyVDC~~~~-t--~~l~r~~~~l~~~~~~~l~IGq~g~~~-~~~F~G~LQ~L~i~~dp~~a 228 (1017) .+++.+.++|||-+.+. . ..+. ... ...-+.||||-.+... .......+-++.||-.|.-. T Consensus 564 ~l~~~~~s~yvdg~~~~~~~~~~~~-~~~---~~~ishfy~gg~~~~~~~~~~~vtv~nv~lynr~l~~ 628 (648) T 1ms9_A 564 TMANKIGSVYIDGEPLEGSGQTVVP-DER---TPDISHFYVGGYKRSGMPTDSRVTVNNVLLYNRQLNA 628 (648) T ss_dssp EEETTEEEEEETTEECTTCCEECSC-SSC---CCCCCEEEESSCSCTTSCCCCCEEEEEEEEESSCCCH T ss_pred EEeCCEEEEEECCEecccccccccc-CCc---ccccceEEEcCCCCccCCCCCCEEEEEeEEecCCCCH Confidence 99999999999998873 2 2222 111 1134799998763211 22355678999999887543No 58>1pwb_A SP-D, PSP-D, pulmonary surfactant-associated protein D; collectin, C-type lectin, alpha-helical coiled coil, carbohydrate recognition domain; HET: GLC; 1.40A {Homo sapiens} SCOP: d.169.1.1 h.1.1.1 PDB: 1pw9_A* 3ikn_A* 3ikp_A* 3ikq_A* 3ikr_A* 4e52_A* 2rie_A* 2ggx_A* 2ggu_A* 2ork_A* 2orj_A* 2ria_A* 2rib_A* 2ric_A* 2rid_A* 2os9_A* 3dbz_A 3g81_A* 3g83_A* 1b08_A ... Probab=77.86 E-value=0.54 Score=46.95 Aligned_cols=12 Identities=25% Similarity=0.952 Sum_probs=9.5 Q ss_pred cccccCCcEEEE Q FBpp0290336 962 RQSCDSKLIILC 973 (1017) Q Consensus 962 ~~~C~~~~~~lC 973 (1017) ..+|+..+..+| T Consensus 164 d~~C~~~~~~iC 175 (177) T 1pwb_A 164 DRACGEKRLVVC 175 (177) T ss_dssp EECTTSEEEEEE T ss_pred CccCCCCeeEEE Confidence 367888888888No 59>1pwb_A SP-D, PSP-D, pulmonary surfactant-associated protein D; collectin, C-type lectin, alpha-helical coiled coil, carbohydrate recognition domain; HET: GLC; 1.40A {Homo sapiens} SCOP: d.169.1.1 h.1.1.1 PDB: 1pw9_A* 3ikn_A* 3ikp_A* 3ikq_A* 3ikr_A* 4e52_A* 2rie_A* 2ggx_A* 2ggu_A* 2ork_A* 2orj_A* 2ria_A* 2rib_A* 2ric_A* 2rid_A* 2os9_A* 3dbz_A 3g81_A* 3g83_A* 1b08_A ... Probab=74.84 E-value=0.73 Score=45.98 Aligned_cols=7 Identities=0% Similarity=-0.054 Sum_probs=3.7 Q ss_pred eEEecCC Q FBpp0290336 918 MVWHGSL 924 (1017) Q Consensus 918 ~vW~Gs~ 924 (1017) .+|.|++ T Consensus 112 ~~WiGl~ 118 (177) T 1pwb_A 112 AAFLSMT 118 (177) T ss_dssp CEECSCB T ss_pred eEEEeeE Confidence 4555554No 60>3w9a_A CCGH131A, putative uncharacterized protein; beta-jelly roll, hydrolase; 1.99A {Coprinopsis cinerea} Probab=72.72 E-value=16 Score=39.43 Aligned_cols=76 Identities=8% Similarity=0.113 Sum_probs=49.5 Q ss_pred ceEEEEEEeecC-----CCCceEEEEEeCCCCeeEEEEEEcccccCceeEEEEEEecccccceeEeEeecccCCCCeeEE Q FBpp0290336 87 EFAILITFRQSS-----LKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLASFGVAHVPDKWNSI 161 (1017) Q Consensus 87 eFSll~TlR~~~-----~~~g~LfsI~~~~~~~~qlgL~ls~~~~~~~~i~l~Y~~~~~~~~q~~~sF~v~l~Dg~WHrl 161 (1017) --.+.+.||++. .+..|+++.... .+++|+.... .+.. .|.|.... + ..|..++.++.||+| T Consensus 93 ~~~~HfSv~~d~~~pln~sheyq~~f~ES----h~felk~G~~-~~~~--~l~~~~~~-----~-~~wstpf~~~~W~NF 159 (245) T 3w9a_A 93 NLFYHFSIKRTNTNAPDPTLEHQVMFFES----HFTELKYGVG-SNPS--NLGWYAGG-----T-ERWSTPFTADTWFNF 159 (245) T ss_dssp EEEEEEEEECCSTTCCCTTSCEEEEEETT----CSEEEEESCS-SCTT--EEEEEETT-----E-EEEEEECCTTCCEEE T ss_pred eEEEEEEEEeccccCCcCccceeeecccc----ceEEEEeCCC-CCCC--cEEEecCC-----c-eEEEeeecCCcEEEE Confidence 455666666633 344676665553 3788888733 2222 46666543 1 567889999999999 Q ss_pred EEEEeC--CeEEEEEc Q FBpp0290336 162 ALQVLS--DKVSFYYD 175 (1017) Q Consensus 162 aLsV~g--~~VtLyVD 175 (1017) ++.|.= +.|.+|.- T Consensus 160 Ai~iDf~~nt~~vy~S 175 (245) T 3w9a_A 160 AYDIDFTAKTVGLWAS 175 (245) T ss_dssp EEEEETTTTEEEEEEE T ss_pred EEEeecCCCEEEEEEe Confidence 998855 67888763No 61>4le3_A Beta-glucanase; GH131, hydrolase; 1.80A {Podospora anserina} PDB: 4le4_A* Probab=70.29 E-value=23 Score=38.45 Aligned_cols=77 Identities=9% Similarity=0.148 Sum_probs=49.1 Q ss_pred ceEEEEEEeecC-----CCCceEEEEEeCCCCeeEEEEEEc----ccccCceeEEEEEEecccccceeEeEeecccCCCC Q FBpp0290336 87 EFAILITFRQSS-----LKGGYLFSVVNPLDTVVQLGVHLS----PVVKNSYNVSLVYTQADQNIGRKLASFGVAHVPDK 157 (1017) Q Consensus 87 eFSll~TlR~~~-----~~~g~LfsI~~~~~~~~qlgL~ls----~~~~~~~~i~l~Y~~~~~~~~q~~~sF~v~l~Dg~ 157 (1017) --.+.+.||.+. .+..|+++.... .+++|++. ....+.. .|.+.... ...|.+++.++. T Consensus 94 ~~~~HfSv~~d~~~pln~shEyqi~F~ES----h~~elk~G~~~g~~~~~~~--~l~~~~~~------~~~wstp~~~~~ 161 (252) T 4le3_A 94 KVYYHFSLMRKDINAPATTREHQIAFFES----HFTELKSGWLSGAPGISDT--LLRWCVGG------QTQWSVEWAADV 161 (252) T ss_dssp EEEEEEEEECCSTTCCCTTSCEEEEEETT----CSEEEEESCCSSSCCGGGG--EEEEEETT------EEEEEEECCTTC T ss_pred eEEEEEEEEeCcCcCCCCCcceeEEeecc----cEEEEEeccccCCCCCCCC--eEEEecCC------ceEEEeeeccCc Confidence 345555566532 255677776663 47888876 1111222 34554431 246789999999 Q ss_pred eeEEEEEEe--CCeEEEEEc Q FBpp0290336 158 WNSIALQVL--SDKVSFYYD 175 (1017) Q Consensus 158 WHrlaLsV~--g~~VtLyVD 175 (1017) ||+||+.|. .+.|.+|.- T Consensus 162 W~NFA~~iDf~~nt~~v~~S 181 (252) T 4le3_A 162 WHNVAYEIDFAAGTVGFWHS 181 (252) T ss_dssp CEEEEEEEETTTTEEEEEEE T ss_pred EEEEEEEeeecCCEEEEEEe Confidence 999999988 788998864No 62>2zzj_A Glucuronan lyase A; beta-jelly roll; HET: CIT; 1.80A {Trichoderma reesei} Probab=69.37 E-value=95 Score=33.15 Aligned_cols=177 Identities=14% Similarity=0.115 Sum_probs=91.0 Q ss_pred CCcEEEecc--CCCCcceEEcCCCcc---CCCcccccCCc-CC---ceEEEEEEeec-----CCCCceEEEEEeCC-C-- Q FBpp0290336 50 FAGIEFGEA--EDGFPAFRFLQTADV---KSPYRMLLPEK-LY---EFAILITFRQS-----SLKGGYLFSVVNPL-D-- 112 (1017) Q Consensus 50 ~~GV~~v~G--~d~~pAy~f~~~a~l---~~pt~~~fP~~-~~---eFSll~TlR~~-----~~~~g~LfsI~~~~-~-- 112 (1017) ...|+.|.. .++..|+||.-..+. ...-+++.-.. ++ ++.+-+.|+.. ......|++..... + T Consensus 21 ~~~i~~v~~~~~~G~~alr~~~~~d~~~~~~~RsE~~~~~~~~~g~~~wy~fs~~lp~d~~~~~~~~~iaQw~~~~~~~~ 100 (238) T 2zzj_A 21 QGTVSEVSNVVFKGTSALKMTQTYTPGYTGRYHSEVDHNRGYQRGEEQFYGFAFRLSEDWQFQPQSYNIAQFIANRPGAG 100 (238) T ss_dssp TCEEEEESSSCSSTTCEEEEEEECCTTCCSCCEEEEEEEEEEETTEEEEEEEEEEECTTCCCCSSEEEEEEEEEECTTCC T ss_pred CCceEEeCccccCCCCEEEEEEeCCCCCCCccceEEeecCCCCCCCcEEEEEEEECCCCCcCCCCceEEEEEEecCCCCC Confidence 456777766 346788888432221 11112222111 21 44444444542 12333466665422 1 Q ss_pred -C----eeEEEEEEcccccCceeEEEEEEecc--cc-cceeEeEe--ecccCCCCeeEEEEEEe-----CCeEEEEEcCc Q FBpp0290336 113 -T----VVQLGVHLSPVVKNSYNVSLVYTQAD--QN-IGRKLASF--GVAHVPDKWNSIALQVL-----SDKVSFYYDCE 177 (1017) Q Consensus 113 -~----~~qlgL~ls~~~~~~~~i~l~Y~~~~--~~-~~q~~~sF--~v~l~Dg~WHrlaLsV~-----g~~VtLyVDC~ 177 (1017) + .+-|.|.+.+. + +.+.+.... .+ -.+....| ..++.-|+||+|.|.|. ...+.||+|-+ T Consensus 101 ~~~~~~~P~~~l~v~g~---~--l~~r~~~g~~~~~~~~~~~~~~~~~~~~~~G~W~~~vi~v~ws~d~~G~~~vw~nG~ 175 (238) T 2zzj_A 101 CGGDDWMPSTMIWIQNN---Q--LYSRYVNGHYRQPNCGRNIVTRPNLATVSAGAWHRVVLQIKWASDNTGYFKIWFDGA 175 (238) T ss_dssp CSSSSEEEEEEEEEETT---E--EEEEEEEECCBTTBCCEEEEEEEEEEECCTTSCEEEEEEEEECSSTTEEEEEEETTE T ss_pred CCccCCCCceeEEEECC---E--EEEEEecCCccCccccCceeeecccCccCCCCeEEEEEEEEecCCCCEEEEEEECCE Confidence 1 67788887665 2 334432211 11 11233344 24566899999999997 45799999999 Q ss_pred cceeecccCCCcccccCCCee--EEEEeccccc--CCccccceeeeEEeeCcccccccCCCC Q FBpp0290336 178 LRNTTLVTREPIELVFDSAST--LYIGQAGSII--GGKFEGYLEKINVYGNPDAINVTCMPP 235 (1017) Q Consensus 178 ~~~t~~l~r~~~~l~~~~~~~--l~IGq~g~~~--~~~F~G~LQ~L~i~~dp~~a~~~C~~~ 235 (1017) ++....=. .+.++.... +-+|--.... .....|......|+.|.-..-..|.+. T Consensus 176 ~v~~~~g~----~~~~~d~~~~yfK~GiYr~~w~~~~~~~g~~~~~~iy~D~v~ig~t~~dv 233 (238) T 2zzj_A 176 KVHEEYNV----ATTVDDDSVFQFRVGLYANSWHDDGHMTGTQGFRQVWYDEVAVGTTFADV 233 (238) T ss_dssp EEEEEEEE----CCSBSSCCEEEEEEEEECHHHHHHSSCCSSCCEEEEEEEEEEEESSHHHH T ss_pred EEEEEeCC----ccccCCCCcceEEEEEcCCccccCcccCCCCcceEEEEeCeEEeCcHHHc Confidence 87653221 111222223 4445442211 123456667777888775555566554No 63>2dpr_A Conantokin-T, CON-T; conantoxin, nmdar antagonist, GLA-containing, metal B protein; HET: CGU; 1.70A {Conus tulipa} PDB: 1ont_A* Probab=56.59 E-value=5.9 Score=25.52 Aligned_cols=12 Identities=50% Similarity=0.717 Sum_probs=10.7 Q ss_pred hHHHHHHHHHhh Q FBpp0290336 1005 ADEYAAHLENLL 1016 (1017) Q Consensus 1005 ~~~~~~~~~~~~ 1016 (1017) |+||++.||+|. T Consensus 2 eeeyqemlenlr 13 (21) T 2dpr_A 2 EEEYQEMLENLR 13 (26) T ss_dssp CHHHHHHHHHHH T ss_pred cHHHHHHHHHHH Confidence 689999999985No 64>3zyp_A CIP1; metal binding protein, calcium-binding, CBM-containing, beta sandwich jelly roll, carbohydrate-binding; HET: NAG; 1.50A {Hypocrea jecorina} Probab=54.43 E-value=69 Score=33.99 Aligned_cols=118 Identities=8% Similarity=0.085 Sum_probs=68.1 Q ss_pred CCCCcceEEcCCCccCCCccccc-CCcCC--ceEEEEEEeecCC---CCceEEEEEeCCCCeeEEEEEEcccccCceeEE Q FBpp0290336 59 EDGFPAFRFLQTADVKSPYRMLL-PEKLY--EFAILITFRQSSL---KGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVS 132 (1017) Q Consensus 59 ~d~~pAy~f~~~a~l~~pt~~~f-P~~~~--eFSll~TlR~~~~---~~g~LfsI~~~~~~~~qlgL~ls~~~~~~~~i~ 132 (1017) +.+..+.||...+. ......+| ...+| +|.+=+.||..+. +...+|++.+..+... .|++.+.. .+ T Consensus 36 hsG~~Slrv~~ga~-g~~~~~~~~~~a~psg~~y~R~~v~~~~~~~~~h~t~~~~~~~~~~~~--~lRiGgq~----~~- 107 (218) T 3zyp_A 36 HSGSNSMKVVGGPN-GYCGHIFFGTTQVPTGDVYVRAWIRLQTALGSNHVTFIIMPDTAQGGK--HLRIGGQS----QV- 107 (218) T ss_dssp SSSSCEEEEECCSS-GGGGCEEEEECCCCSSSEEEEEEEEESSCCCSSCEEEEEEEBGGGTTC--EEEEEEET----TE- T ss_pred cCCceeEEEecCCC-CCccceeeeeccCCCCceEEEEEEEeccCCCCCcEEEEEeecCCCCCc--cEEEcccc----ce- Confidence 55677777743321 11111111 12334 7778888888654 3346888887655433 45666652 22 Q ss_pred EEEEec-c-cc---cceeEeEeecccCCCCeeEEEEEEeC-CeEEEEEcCccceeecc Q FBpp0290336 133 LVYTQA-D-QN---IGRKLASFGVAHVPDKWNSIALQVLS-DKVSFYYDCELRNTTLV 184 (1017) Q Consensus 133 l~Y~~~-~-~~---~~q~~~sF~v~l~Dg~WHrlaLsV~g-~~VtLyVDC~~~~t~~l 184 (1017) |.|... + .. ++.+-+.-.+.+..++||-|.+.|.. ..+.+|||-+++....+ T Consensus 108 l~~n~~sddat~p~~sp~G~a~s~~l~~~~W~C~E~~v~~~g~~~~WldG~~v~~lt~ 165 (218) T 3zyp_A 108 LDYNRESDDATLPDLSPNGIASTVTLPTGAFQCFEYHLGTDGTIETWLNGSLIPGMTV 165 (218) T ss_dssp EEEEETTTCCEESCSSHHHHHHSCCCCCSSCEEEEEEECSSSCEEEEETTEECGGGCB T ss_pred eeeeeccCcccccccCCCcccccccccCCcEEEEEEEECCCCeEEEEECCEEeeeEEe Confidence 444433 1 11 11111111467889999999999975 47999999999877543No 65>3imm_A Putative secreted glycosylhydrolase; YP_001301887.1, putative glycosyl hydrolase; HET: MSE; 2.00A {Parabacteroides distasonis atcc 8503} Probab=48.92 E-value=22 Score=36.89 Aligned_cols=103 Identities=13% Similarity=0.234 Sum_probs=53.8 Q ss_pred cccCCcCC-ceEEEEEEeecC-CCCceEEEEEeCCCC-eeEEEEEEcccccCce-eEEEEEEecccccceeEe-Eeeccc Q FBpp0290336 79 MLLPEKLY-EFAILITFRQSS-LKGGYLFSVVNPLDT-VVQLGVHLSPVVKNSY-NVSLVYTQADQNIGRKLA-SFGVAH 153 (1017) Q Consensus 79 ~~fP~~~~-eFSll~TlR~~~-~~~g~LfsI~~~~~~-~~qlgL~ls~~~~~~~-~i~l~Y~~~~~~~~q~~~-sF~v~l 153 (1017) .|+-+.-+ +|.|.+-+|... .++|++|.+....+. ..-++++|........ .+. .+...+..-....+ .-.... T Consensus 39 ~l~t~~~y~df~L~~e~k~~~~~NSGi~~r~~~~~~~~~~G~E~Qi~d~~~~~~~~~~-~~~~~G~ly~~~~~~~~~~~k 117 (201) T 3imm_A 39 SIWTKDEYENFELDLDFKTDVGTNSGVVVYCTDTKDWIPNSVEIQIADDHCEKWGNGK-PYEKCGAIYGHLGAVQDKVVK 117 (201) T ss_dssp CEEESSCBCSEEEEEEEEECTTCEEEEEEEESCSSSCTTSSEEEEEECTTCCTTTTCC-GGGSTTSBTTTBCCSSSCCSC T ss_pred cEEECCcccCEEEEEEEEeCCCCCCEEEEEeccCCCCcCceEEEEEECCCCCcccccC-CccccceeecccCcccccccC Confidence 34433335 999999999854 577888877653110 0012333322100000 000 00000100000000 001112 Q ss_pred CCCCeeEEEEEEeCCeEEEEEcCccceee Q FBpp0290336 154 VPDKWNSIALQVLSDKVSFYYDCELRNTT 182 (1017) Q Consensus 154 ~Dg~WHrlaLsV~g~~VtLyVDC~~~~t~ 182 (1017) ..++|+++.|.|.+++|++|||-.++... T Consensus 118 p~geWn~~~I~~~g~~i~v~lNG~~v~~~ 146 (201) T 3imm_A 118 KPGEWNHMRIKCAGQHIMVILNGKKVTEM 146 (201) T ss_dssp CTTSEEEEEEEEETTEEEEEETTEEEEEE T ss_pred CCCccEEEEEEEECCEEEEEECCEEEEEE Confidence 36899999999999999999999998763No 66>1buu_A Protein (mannose-binding protein A); lectin, HOST defense, metalloprotein, sugar binding protein; 1.90A {Rattus norvegicus} SCOP: d.169.1.1 h.1.1.1 Probab=45.27 E-value=5.4 Score=39.77 Aligned_cols=12 Identities=25% Similarity=0.656 Sum_probs=10.1 Q ss_pred cccccCCcEEEE Q FBpp0290336 962 RQSCDSKLIILC 973 (1017) Q Consensus 962 ~~~C~~~~~~lC 973 (1017) ..+|+.++..+| T Consensus 153 d~~C~~~~~~IC 164 (168) T 1buu_A 153 DISCQASHTAVC 164 (168) T ss_dssp EECTTSCEEEEE T ss_pred CcCCCCCeeEEE Confidence 468999999998No 67>3s5q_A Putative glycosylhydrolase; concanavalin A-like lectins/glucanases, structural genomics, center for structural genomics, JCSG; 1.85A {Parabacteroides distasonis} Probab=43.76 E-value=27 Score=36.71 Aligned_cols=102 Identities=11% Similarity=0.195 Sum_probs=54.0 Q ss_pred cccCCcCC-ceEEEEEEeec-CCCCceEEEEEeCCCC-eeEEEEEEcccccCceeEEEEE--EecccccceeEe-Eeecc Q FBpp0290336 79 MLLPEKLY-EFAILITFRQS-SLKGGYLFSVVNPLDT-VVQLGVHLSPVVKNSYNVSLVY--TQADQNIGRKLA-SFGVA 152 (1017) Q Consensus 79 ~~fP~~~~-eFSll~TlR~~-~~~~g~LfsI~~~~~~-~~qlgL~ls~~~~~~~~i~l~Y--~~~~~~~~q~~~-sF~v~ 152 (1017) .|+-+.-+ +|.|.+-+|.. ..++|++|.+....+. ..-+++++......... -.+ ...+..-....+ +-... T Consensus 52 ~L~t~~~f~dF~L~~e~k~~~~~NSGI~~r~~~~~~~~~~G~E~QIld~~~~~~~--~~~~~~~~GslY~~~~~~~~~~~ 129 (214) T 3s5q_A 52 SIWTKVQYENFILDLEFKTDVNTNSGVVIYCTDKGNWIPSSIEIQIADDHHPEWQ--SYPEYWRCGSIYGHKGANEQLVV 129 (214) T ss_dssp CEEESSCBCSEEEEEEEEECTTCEEEEEEEESCSTTCGGGSEEEEEECTTSGGGG--GSCGGGSTTSBTTTBCCSSSCCS T ss_pred cEEECCeeccEEEEEEEEECCCCccEEEEEecCCCCCcceEEEEEEECCCCCccc--ccCCCCceeeeccccCccccccc Confidence 34444335 99999999985 4578888877653211 00123333221000000 000 000100000000 00111 Q ss_pred cCCCCeeEEEEEEeCCeEEEEEcCccceee Q FBpp0290336 153 HVPDKWNSIALQVLSDKVSFYYDCELRNTT 182 (1017) Q Consensus 153 l~Dg~WHrlaLsV~g~~VtLyVDC~~~~t~ 182 (1017) ...++|+++-|.|.+++|++|||-.++... T Consensus 130 kp~geWn~~~I~~~g~~i~v~lNG~~v~~~ 159 (214) T 3s5q_A 130 KKPGEWNRMIITAKGQQIDIELNGKHIVSA 159 (214) T ss_dssp CCTTSEEEEEEEEETTEEEEEETTEEEEEE T ss_pred CCCCceEEEEEEEECCEEEEEECCEEEEEE Confidence 236899999999999999999999988663No 68>3i8t_A Galectin-4; S-type lectin, carbohydrate binding, molecular recognition, sugar binding protein; HET: LBT; 2.10A {Mus musculus} SCOP: b.29.1.0 PDB: 2dyc_A Probab=41.85 E-value=3.2e+02 Score=27.43 Aligned_cols=121 Identities=12% Similarity=0.119 Sum_probs=62.3 Q ss_pred CCCcceEEcCCCc----cCCCcccccCCcCC-ceEEEEEEeecCCCCceEEEEEeCCCCeeEEEEEEcccccCceeEEEE Q FBpp0290336 60 DGFPAFRFLQTAD----VKSPYRMLLPEKLY-EFAILITFRQSSLKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLV 134 (1017) Q Consensus 60 d~~pAy~f~~~a~----l~~pt~~~fP~~~~-eFSll~TlR~~~~~~g~LfsI~~~~~~~~qlgL~ls~~~~~~~~i~l~ 134 (1017) ..+|||....... ...|....+|.+|. .=+|+++=+.......+-+.+.........+.|.++.+-+....|..- T Consensus 10 ~~~~~~~~~~~~~~~~~p~vPf~~~ip~gL~~G~~I~I~G~v~~~a~rF~Inl~~g~~~~~dIalHfnpRf~~~~~IV~N 89 (164) T 3i8t_A 10 HTDPAYVPAPGYQPTYNPTLPYKRPIPGGLSVGMSVYIQGMAKENMRRFHVNFAVGQDDGADVAFHFNPRFDGWDKVVFN 89 (164) T ss_dssp ---------------CCCCSSEEEECTTCCCTTCEEEEEEEECTTCCBEEEEEESSSSTTCCEEEEEEEECSSSCEEEEE T ss_pred cCCcccccCCCCCcccCCCCCEEeecCCCCcCCCEEEEEEEECCCCCEEEEEeccCCCCCCCEEEEEeeeeCCCCEEEEE Confidence 3578998765543 46778888899885 656666555544444465666543211234555555553221223322 Q ss_pred EEecccccceeEeEeecccCCCCeeEEEEEEeCCeEEEEEcCcccee Q FBpp0290336 135 YTQADQNIGRKLASFGVAHVPDKWNSIALQVLSDKVSFYYDCELRNT 181 (1017) Q Consensus 135 Y~~~~~~~~q~~~sF~v~l~Dg~WHrlaLsV~g~~VtLyVDC~~~~t 181 (1017) ....+ ...++-.....+...|+=-.|.|.+..+...++||-..+.+ T Consensus 90 S~~~g-~WG~EEr~~~~PF~~G~~F~l~I~~~~~~f~V~VNg~~~~~ 135 (164) T 3i8t_A 90 TMQSG-QWGKEEKKKSMPFQKGKHFELVFMVMPEHYKVVVNGNSFYE 135 (164) T ss_dssp EEETT-EECCCEEESCCCCCTTCEEEEEEEECSSEEEEEETTEEEEE T ss_pred cccCC-EeCCCcccCCCCCccCCEEEEEEEEccCEEEEEECCEEEEE Confidence 22222 11111111135666888899999999999999999887655No 69>3u1x_A Putative glycosyl hydrolase; glycosyl hydrolysis, carbohydrate metabolism,, structural GE joint center for structural genomics, JCSG; HET: MSE PGE; 1.70A {Parabacteroides distasonis} Probab=41.59 E-value=48 Score=35.24 Aligned_cols=30 Identities=20% Similarity=0.246 Sum_probs=26.5 Q ss_pred CCCCeeEEEEEEeCCeEEEEEcCccceeec Q FBpp0290336 154 VPDKWNSIALQVLSDKVSFYYDCELRNTTL 183 (1017) Q Consensus 154 ~Dg~WHrlaLsV~g~~VtLyVDC~~~~t~~ 183 (1017) ..++|+++.|.|.+++|+++||-+++.... T Consensus 158 ~~geWn~~~I~~~g~~i~v~lNG~~v~~~~ 187 (236) T 3u1x_A 158 PPGEWNSSMVLYKDGYVEHWLNGEKLFSFQ 187 (236) T ss_dssp CTTSCEEEEEEEETTEEEEEETTEEEEEEE T ss_pred CCCcceEEEEEEECCEEEEEECCEEEEEEe Confidence 368999999999999999999999886643No 70>3wvj_A Beta-glucanase; thermostability, industrial enzyme, pastoris, A classic beta-jellyroll fold, hydrolase; HET: B3P; 1.95A {Clostridium thermocellum} Probab=39.77 E-value=3.8e+02 Score=27.75 Aligned_cols=28 Identities=14% Similarity=0.290 Sum_probs=25.7 Q ss_pred CCCeeEEEEEEeCCeEEEEEcCccceee Q FBpp0290336 155 PDKWNSIALQVLSDKVSFYYDCELRNTT 182 (1017) Q Consensus 155 Dg~WHrlaLsV~g~~VtLyVDC~~~~t~ 182 (1017) ...||..+|....++|++|||-+++.+. T Consensus 143 ~~~fH~Y~~~W~~~~i~~yvDg~~~~~~ 170 (220) T 3wvj_A 143 SQDFHTYGFEWRPDYIDFYVDGKKVYRG 170 (220) T ss_dssp TTSCEEEEEEEETTEEEEEETTEEEEEE T ss_pred CCCcEEEEEEEECCEEEEEECCEEEEEE Confidence 5799999999999999999999988764No 71>3h3l_A Putative sugar hydrolase; YP_001304206.1, structural genomic center for structural genomics, JCSG; HET: MSE; 1.59A {Parabacteroides distasonis atcc 8503} Probab=37.62 E-value=26 Score=37.54 Aligned_cols=103 Identities=14% Similarity=0.093 Sum_probs=53.7 Q ss_pred ccCCcCC-ceEEEEEEeec-CCCCceEEEEEeCCCCe---eEEEEEEcccccC-ceeEEE-EEEecccccceeEeEeecc Q FBpp0290336 80 LLPEKLY-EFAILITFRQS-SLKGGYLFSVVNPLDTV---VQLGVHLSPVVKN-SYNVSL-VYTQADQNIGRKLASFGVA 152 (1017) Q Consensus 80 ~fP~~~~-eFSll~TlR~~-~~~~g~LfsI~~~~~~~---~qlgL~ls~~~~~-~~~i~l-~Y~~~~~~~~q~~~sF~v~ 152 (1017) |+-..-+ +|.|.+-+|.. ..++|++|.+....... .-+++++...... ...+-. -....+..-....+.-... T Consensus 70 L~t~~~y~dF~L~~E~k~~~~~NSGI~~r~~~~~g~~~~~~g~E~QIlD~~~~~~~~~g~~~~~~~GslY~~~~~~~~~~ 149 (241) T 3h3l_A 70 LIYDKKFKNFVFEIEWKIDKAGNSGIFYTAQEIEGTPIYYSSPEYQLLDNENMPDAWEGCDGNRQAGAVYDMIMPDPQPV 149 (241) T ss_dssp EEESSCBSSEEEEEEEEECBTCEEEEEEEECCCTTSCGGGSSCEEEEECTTTCGGGSSSSTTTTSTTSBTTTBCCSSCCC T ss_pred EeEcCccccEEEEEEEEeCCCCCcEEEEEecCCCCCccccceEEEEEeCCCCCCccccccCCCCcccccccccCcccccc Confidence 3333335 99999999985 46778888776532110 0123333211000 000000 0000000000000011122 Q ss_pred cCCCCeeEEEEEEeCCeEEEEEcCccceee Q FBpp0290336 153 HVPDKWNSIALQVLSDKVSFYYDCELRNTT 182 (1017) Q Consensus 153 l~Dg~WHrlaLsV~g~~VtLyVDC~~~~t~ 182 (1017) ...++|+++-|.|.+++|+++||-.++... T Consensus 150 ~p~geWN~~~I~~~g~~i~v~lNG~~V~~~ 179 (241) T 3h3l_A 150 KPYGNWNKTRIVVYNQRVIHYMNDVKILEF 179 (241) T ss_dssp CCTTSCEEEEEEEETTEEEEEETTEEEEEE T ss_pred CCCCceEEEEEEEECCEEEEEECCEEEEEE Confidence 236899999999999999999999988764No 72>3osd_A Putative glycosyl hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE; 1.80A {Bacteroides thetaiotaomicron} PDB: 3nmb_A 4hxc_A* Probab=37.08 E-value=38 Score=36.89 Aligned_cols=28 Identities=18% Similarity=0.110 Sum_probs=25.6 Q ss_pred CCCeeEEEEEEeCCeEEEEEcCccceee Q FBpp0290336 155 PDKWNSIALQVLSDKVSFYYDCELRNTT 182 (1017) Q Consensus 155 Dg~WHrlaLsV~g~~VtLyVDC~~~~t~ 182 (1017) .++|+++-|.|.+++|++|||-.++... T Consensus 178 ~geWN~~~I~v~g~~i~v~lNG~~V~~~ 205 (265) T 3osd_A 178 FGEWNKAKIMVYKGTVVHGQNDENVLEY 205 (265) T ss_dssp TTSCEEEEEEEETTEEEEEETTEEEEEE T ss_pred CCccEEEEEEEECCEEEEEECCEEEEEE Confidence 6899999999999999999999987663No 73>3hbk_A Putative glycosyl hydrolase; YP_001302580.1, WAS domain of U function (DUF1080), structural genomics; HET: MSE; 2.36A {Parabacteroides distasonis atcc 8503} Probab=34.84 E-value=1.2e+02 Score=32.52 Aligned_cols=28 Identities=14% Similarity=0.278 Sum_probs=25.6 Q ss_pred CCCeeEEEEEE-eCCeEEEEEcCccceee Q FBpp0290336 155 PDKWNSIALQV-LSDKVSFYYDCELRNTT 182 (1017) Q Consensus 155 Dg~WHrlaLsV-~g~~VtLyVDC~~~~t~ 182 (1017) .++|+++-|.| .+++|++|||-.++... T Consensus 162 ~geWN~~~I~~~~g~~i~v~lNG~~V~~~ 190 (245) T 3hbk_A 162 VGEWNTAVVKVFPNNHVEHWLNGVKVLEY 190 (245) T ss_dssp TTSEEEEEEEECTTCEEEEEETTEEEEEE T ss_pred CCccEEEEEEEEcCCEEEEEECCEEEEEe Confidence 68999999999 89999999999988764No 74>3i4i_A 1,3-1,4-beta-glucanase; beta-sandwich, hydrolase; 1.89A {Uncultured murine large bowel bacteriuorganism_taxid} SCOP: b.29.1.2 Probab=33.52 E-value=5e+02 Score=27.27 Aligned_cols=29 Identities=10% Similarity=0.170 Sum_probs=26.1 Q ss_pred CCCCeeEEEEEEeCCeEEEEEcCccceee Q FBpp0290336 154 VPDKWNSIALQVLSDKVSFYYDCELRNTT 182 (1017) Q Consensus 154 ~Dg~WHrlaLsV~g~~VtLyVDC~~~~t~ 182 (1017) ....||..+|....+.|++|||-+++.+. T Consensus 160 ~~~~fH~Y~ieW~~~~I~~yvDg~~~~~~ 188 (234) T 3i4i_A 160 ASEDFHIYAFNWQPNYIAWLVDGEEVYRA 188 (234) T ss_dssp TTTSCEEEEEEEETTEEEEEETTEEEEEE T ss_pred CCCCcEEEEEEEECCEEEEEECCEEEEEE Confidence 36799999999999999999999988774No 75>1o91_A Collagen alpha 1(VIII) chain; C1Q_LIKE_domain, extracellular matrix, adhesion, connective tissue, repeat, structural protein; HET: CPS; 1.9A {Mus musculus} SCOP: b.22.1.1 Probab=32.32 E-value=11 Score=38.47 Aligned_cols=55 Identities=25% Similarity=0.349 Sum_probs=23.5 Q ss_pred CcEEecCccccccCCCCcccCCCc-eeecCCCccCCCCCCCcceEEecCCCCcccccCcccC Q FBpp0290336 876 GDVLFNSWKGIFNGQGGFFSQAPR-IYSFSGKNVMTDSTWPMKMVWHGSLPNGERSMDTYCD 936 (1017) Q Consensus 876 g~vl~~~~~~l~~~~~~~~~~~~~-i~~f~~~~~~~~~~~~~k~vW~Gs~~~g~~~~~~~C~ 936 (1017) +.|+.+.-...-. .-++|+...+ +|.|+=+-.. ..+.+|..+..++......+|+ T Consensus 70 d~v~~N~G~~yn~-~TG~FTapv~G~Y~Fs~~~~~-----~~~~~~v~L~~Ng~~~~~~~~~ 125 (178) T 1o91_A 70 DKLLYNGRQNYNP-QTGIFTCEVPGVYYFAYHVHC-----KGGNVWVALFKNNEPMMYTYDE 125 (178) T ss_dssp CEEEEEETTCEET-TTTEEECCSCEEEEEEEEEEE-----EEEEEEEEEEETTEEEEEEEEC T ss_pred CEEEEcCCCCccC-CCCeEEeeCCeEEEEEEEEEe-----CCceEEEEEEECCEEEEEEEec Confidence 4444443333322 2334555444 6655322111 1234555555555554334443No 76>4jqt_A Putative glycosyl hydrolase; PF06439 family protein, DUF1080, structural genomics, joint for structural genomics, JCSG; HET: MSE; 2.49A {Bacteroides thetaiotaomicron} Probab=30.59 E-value=1.8e+02 Score=33.72 Aligned_cols=98 Identities=17% Similarity=0.325 Sum_probs=55.8 Q ss_pred cccCCcCC-ceEEEEEEeecC-CCCceEEEEEeCCC----CeeEEEEEEcccccCceeEEEEEEecccccceeEeE---- Q FBpp0290336 79 MLLPEKLY-EFAILITFRQSS-LKGGYLFSVVNPLD----TVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLAS---- 148 (1017) Q Consensus 79 ~~fP~~~~-eFSll~TlR~~~-~~~g~LfsI~~~~~----~~~qlgL~ls~~~~~~~~i~l~Y~~~~~~~~q~~~s---- 148 (1017) .++-+.-+ +|.|.+-+|... .++|++|.+..... ...-+++.+....+. .. --+|...... .+.. T Consensus 44 ~l~t~~~y~dF~L~~e~k~~~~~NSGI~~r~~~~~~~~~~~~~gyqvqi~~~~~~-~~-g~ly~~~~~g---~l~~~~~~ 118 (431) T 4jqt_A 44 FLATTKNYGDFILEFDFKIDDGLNSGVQLRSESKKDYQNGRVHGYQFEIDPSKRA-WS-GGIYDEARRN---WLYPLTLN 118 (431) T ss_dssp EEEESSCBSSEEEEEEEEECTTCCEEEEEEEBCCTTTGGGCCBEEEEEECCSTTC-CT-TCEEEETTTE---EEECGGGS T ss_pred eEEeCCccccEEEEEEEEeCCCCceEEEEEecCcccccCCceeEEEEEEcCCCCC-Cc-CcccCcCccc---eecccccC Confidence 44444445 999999999864 67888887764211 011234444332110 00 0123211100 0000 Q ss_pred --eecccCCCCeeEEEEEEeCCeEEEEEcCcccee Q FBpp0290336 149 --FGVAHVPDKWNSIALQVLSDKVSFYYDCELRNT 181 (1017) Q Consensus 149 --F~v~l~Dg~WHrlaLsV~g~~VtLyVDC~~~~t 181 (1017) ....+-.++|+++.|.|.+++|++|||-.++.+ T Consensus 119 p~~~~~~~~geWn~~~I~~~g~~i~v~lNG~~v~~ 153 (431) T 4jqt_A 119 PAAKTAFKNNAWNKARIEAIGNSIRTWINGVPCAN 153 (431) T ss_dssp GGGGGCCCTTSCEEEEEEEETTEEEEEETTEEEEE T ss_pred chhhcccCCCCcEEEEEEEECCEEEEEECCEEEEE Confidence 011223789999999999999999999988755No 77>1axk_A Gluxyn-1; bifunctional, fusion protein, 1,4-beta-xylanase, 1,3-1,4-beta-glucanase, hybrid enzyme; 2.10A {Bacillus subtilis} SCOP: b.29.1.2 b.29.1.11 Probab=30.54 E-value=6.9e+02 Score=28.80 Aligned_cols=68 Identities=15% Similarity=0.271 Sum_probs=43.9 Q ss_pred CCCeeEEEEEEeCCeEEEEEcCccceeec--ccCCCcccccCCCeeEEEEec-----c-cccCCccccceeeeEEeeCcc Q FBpp0290336 155 PDKWNSIALQVLSDKVSFYYDCELRNTTL--VTREPIELVFDSASTLYIGQA-----G-SIIGGKFEGYLEKINVYGNPD 226 (1017) Q Consensus 155 Dg~WHrlaLsV~g~~VtLyVDC~~~~t~~--l~r~~~~l~~~~~~~l~IGq~-----g-~~~~~~F~G~LQ~L~i~~dp~ 226 (1017) ...||..+|....+.|++|||-+++.+.. ++..+..|.+ .|+++.. + ......+.-.|.-|||+.... T Consensus 83 ~~~FHtY~veWtp~~I~wyVDG~~v~t~~~~~P~~P~~liL----NlwvGgg~g~W~G~p~~~~P~~m~VDyVRVYq~~~ 158 (394) T 1axk_A 83 SKGFHTYAFDWQPGYIKWYVDGVLKHTATANIPSTPGKIMM----NLWNGTGVDDWLGSYNGANPLYAEYDWVKYTSNAS 158 (394) T ss_dssp GGSCEEEEEEEETTEEEEEETTEEEEEECSSCCCSCBEEEE----EEEEBSSCHHHHCCCCCCCCEEEEEEEEEEEECCC T ss_pred CCCeEEEEEEEECCEEEEEECCEEEEEECCCCCCCCeEEEE----EEEccCCccccCCCCCCCCCeEEEEEEEEeeccCC Confidence 46899999999999999999999877643 3333333322 3455420 0 011123566788888887653No 78>3iln_A Laminarinase; jelly ROW, hydrolase, family 16 glycosyl hydrolase; 1.95A {Rhodothermus marinus} Probab=25.46 E-value=6e+02 Score=26.76 Aligned_cols=34 Identities=12% Similarity=0.238 Sum_probs=28.4 Q ss_pred eecccCCCCeeEEEEEEeCCeEEEEEcCccceee Q FBpp0290336 149 FGVAHVPDKWNSIALQVLSDKVSFYYDCELRNTT 182 (1017) Q Consensus 149 F~v~l~Dg~WHrlaLsV~g~~VtLyVDC~~~~t~ 182 (1017) +........||..+|....+.|++|||-+++.+. T Consensus 158 ~~~~~~~~~fH~Y~~eW~~~~I~~~vDg~~~~~~ 191 (251) T 3iln_A 158 IRVPTARTDFHVYAIEWTPEEIRWFVDDSLYYRF 191 (251) T ss_dssp EECTTTTTSCEEEEEEECSSEEEEEETTEEEEEE T ss_pred EeCCCCCCCCEEEEEEEECCEEEEEECCEEEEEE Confidence 3444557899999999999999999999887664No 79>1cpn_A Circularly permuted; hydrolase(glucanase); 1.80A {Paenibacillus macerans} SCOP: b.29.1.2 PDB: 1cpm_A Probab=25.30 E-value=6.4e+02 Score=25.91 Aligned_cols=70 Identities=16% Similarity=0.281 Sum_probs=45.4 Q ss_pred CCCeeEEEEEEeCCeEEEEEcCccceeec--ccCCCcccccCCCeeEEEEe-----cccc-cCCccccceeeeEEeeCcc Q FBpp0290336 155 PDKWNSIALQVLSDKVSFYYDCELRNTTL--VTREPIELVFDSASTLYIGQ-----AGSI-IGGKFEGYLEKINVYGNPD 226 (1017) Q Consensus 155 Dg~WHrlaLsV~g~~VtLyVDC~~~~t~~--l~r~~~~l~~~~~~~l~IGq-----~g~~-~~~~F~G~LQ~L~i~~dp~ 226 (1017) ...||..+|....+.|++|||-+++.+.. ++..+..|.+ .|+++. .+.. ...-++-.|.-+||+...+ T Consensus 83 ~~~fH~Y~~eW~~~~I~~yvDg~~~~~~~~~~p~~p~~iil----nl~~ggg~~~W~G~~~~~~p~~m~VDyVrvyq~~~ 158 (208) T 1cpn_A 83 SKGFHTYAFDWQPGYIKWYVDGVLKHTATANIPSTPGKIMM----NLWNGTGVDDWLGSYNGANPLYAEYDWVKYTSNGS 158 (208) T ss_dssp GGSCEEEEEEEETTEEEEEETTEEEEEECSSCCCSCBEEEE----EEEEBSSCHHHHCCCCCCCCEEEEEEEEEEEETTE T ss_pred CCCcEEEEEEEECCEEEEEECCEEEEEEcCCCCCCCcEEEE----EEEcCCCcccCCCCCCCCCCeEEEEEEEEEEECCC Confidence 47899999999999999999999887743 3333333322 344442 1100 1123566788999988766 Q ss_pred cc Q FBpp0290336 227 AI 228 (1017) Q Consensus 227 ~a 228 (1017) .. T Consensus 159 ~~ 160 (208) T 1cpn_A 159 VF 160 (208) T ss_dssp EE T ss_pred cc Confidence 54No 80>4qhz_A Putative glycosyl hydrolase; PF06439 family protein, DUF1080, structural genomics, joint for structural genomics, JCSG; HET: MLY; 2.13A {Parabacteroides distasonis} Probab=25.28 E-value=58 Score=35.18 Aligned_cols=28 Identities=14% Similarity=0.293 Sum_probs=24.7 Q ss_pred CCCCeeEEEEEEe------------CCeEEEEEcCcccee Q FBpp0290336 154 VPDKWNSIALQVL------------SDKVSFYYDCELRNT 181 (1017) Q Consensus 154 ~Dg~WHrlaLsV~------------g~~VtLyVDC~~~~t 181 (1017) -.++|+++-|.|. +.+|+++||-.++.. T Consensus 161 p~GeWNt~~I~~~a~~f~~~G~~~~g~~itv~lNG~~V~~ 200 (246) T 4qhz_A 161 XPGEWNVYDIIYTAPTFKEDGSYRTHPTVTVIQNGVVLQN 200 (246) T ss_dssp CTTSEEEEEEEEECCEECTTSSEEECCEEEEEETTEEEEE T ss_pred CcCcceEEEEEEEecccccccccccCCEEEEEECCEEEEE Confidence 3689999999996 689999999998865No 81>2ayh_A 1,3-1,4-beta-D-glucan 4-glucanohydrolase; hydrolase (glucanase); 1.60A {Hybrid} SCOP: b.29.1.2 PDB: 1byh_A 1glh_A 1u0a_A* 1mac_A 1gbg_A Probab=25.12 E-value=4.9e+02 Score=26.77 Aligned_cols=28 Identities=18% Similarity=0.361 Sum_probs=25.5 Q ss_pred CCCeeEEEEEEeCCeEEEEEcCccceee Q FBpp0290336 155 PDKWNSIALQVLSDKVSFYYDCELRNTT 182 (1017) Q Consensus 155 Dg~WHrlaLsV~g~~VtLyVDC~~~~t~ 182 (1017) ...||..+|....++|++|||-+++.+. T Consensus 141 ~~~fH~Y~~~W~~~~i~~yvDg~~~~~~ 168 (214) T 2ayh_A 141 SKGFHTYAFDWQPGYIKWYVDGVLKHTA 168 (214) T ss_dssp GGSCEEEEEEEETTEEEEEETTEEEEEE T ss_pred cCCcEEEEEEEECCEEEEEECCEEEEEE Confidence 4789999999999999999999988774No 82>1buu_A Protein (mannose-binding protein A); lectin, HOST defense, metalloprotein, sugar binding protein; 1.90A {Rattus norvegicus} SCOP: d.169.1.1 h.1.1.1 Probab=23.84 E-value=20 Score=35.57 Aligned_cols=8 Identities=13% Similarity=0.252 Sum_probs=4.3 Q ss_pred hhhHHHHH Q FBpp0290336 829 GADFACYR 836 (1017) Q Consensus 829 GAD~~C~~ 836 (1017) -|..+|++ T Consensus 70 ~A~~~C~~ 77 (168) T 1buu_A 70 KVKALCSE 77 (168) T ss_dssp HHHHHHHH T ss_pred HHHHHHHH Confidence 35566653No 83>4jqt_A Putative glycosyl hydrolase; PF06439 family protein, DUF1080, structural genomics, joint for structural genomics, JCSG; HET: MSE; 2.49A {Bacteroides thetaiotaomicron} Probab=23.64 E-value=1.1e+02 Score=35.63 Aligned_cols=104 Identities=11% Similarity=0.131 Sum_probs=54.5 Q ss_pred ccCCcCC-ceEEEEEEeecC-CCCceEEEEEeCCC----CeeEEEEEEcccccCc-eeEEE-EEEecccccceeEeEeec Q FBpp0290336 80 LLPEKLY-EFAILITFRQSS-LKGGYLFSVVNPLD----TVVQLGVHLSPVVKNS-YNVSL-VYTQADQNIGRKLASFGV 151 (1017) Q Consensus 80 ~fP~~~~-eFSll~TlR~~~-~~~g~LfsI~~~~~----~~~qlgL~ls~~~~~~-~~i~l-~Y~~~~~~~~q~~~sF~v 151 (1017) |+-..-+ +|.|.+-+|... .++|++|.+..... -..-++++|....... ..+-- -....++.-....+.-.. T Consensus 271 l~t~~~f~df~L~~e~k~~~~~NSGv~~~~~~~~~~~~~~~~g~E~Qild~~~~~~~~~g~~~~~~~Gsly~~~~~~~~~ 350 (431) T 4jqt_A 271 IVTTRKYKNFILTVDFKITEGANSGVKYFVNPDLNKGEGSAIGCEFQILDDDKHPDAKLGVKGNRKLGSLYDLIPAPEKK 350 (431) T ss_dssp EEESSCBCSEEEEEEEEECTTCEEEEEEEEETTTCCSSSCCEEEEEEEECTTTCGGGGSSSTTTTSTTSBTTTBCCCSSC T ss_pred EEECCccceEEEEEEEEcCCCCCceEEEEecCccccCCCCcceEEEEEeCCCCCCccccCCCCCcccceecccccccccc Confidence 3333335 999999999854 67788887764311 1123445553211000 00000 000000000000011001 Q ss_pred ccCCCCeeEEEEEEeCCeEEEEEcCccceeec Q FBpp0290336 152 AHVPDKWNSIALQVLSDKVSFYYDCELRNTTL 183 (1017) Q Consensus 152 ~l~Dg~WHrlaLsV~g~~VtLyVDC~~~~t~~ 183 (1017) .+-.++|+++-|.|.+++|++|||-.++.... T Consensus 351 ~~kpgeWn~~~I~~~g~~i~v~lNG~~v~~~~ 382 (431) T 4jqt_A 351 PFNKKDFNTATIIVQDNHVEHWLNGVKLIEYT 382 (431) T ss_dssp CCCTTSCEEEEEEEETTEEEEEETTEEEEEEE T ss_pred CCCCCCCeEEEEEEECCEEEEEECCEEEEEee Confidence 11239999999999999999999999877643No 84>4bpz_A Endo-1,3-beta-glucanase, family GH16; hydrolase, marine laminarinase; HET: GLC BGC; 1.13A {Zobellia galactanivorans} PDB: 4bow_A* 4bq1_A Probab=23.32 E-value=7.7e+02 Score=26.12 Aligned_cols=32 Identities=9% Similarity=0.196 Sum_probs=27.4 Q ss_pred cccCCCCeeEEEEEEeCCeEEEEEcCccceee Q FBpp0290336 151 VAHVPDKWNSIALQVLSDKVSFYYDCELRNTT 182 (1017) Q Consensus 151 v~l~Dg~WHrlaLsV~g~~VtLyVDC~~~~t~ 182 (1017) +......||..+|....+.|++|||-+++.+. T Consensus 179 ~~~~~~~fH~Y~~eW~~~~I~~yvDg~~~~~~ 210 (256) T 4bpz_A 179 ITNASGSFHVYSLEWNASAMKVFLDDTLVYEL 210 (256) T ss_dssp CSCTTTSCEEEEEEECSSEEEEEETTEEEEEE T ss_pred cCCCCCCCEEEEEEEECCEEEEEECCeEEEEe Confidence 34456799999999999999999999887664No 85>1umz_A Xyloglucan endotransglycosylase; glycoside hydrolase, XET, XTH, XEH, transglycosylation, transferase, glycosyltransferase; HET: NAG BMA BGC GAL; 1.8A {Populus tremula} SCOP: b.29.1.2 PDB: 1un1_A* Probab=23.19 E-value=8.4e+02 Score=26.50 Aligned_cols=28 Identities=7% Similarity=-0.056 Sum_probs=25.3 Q ss_pred CCCeeEEEEEEeCCeEEEEEcCccceee Q FBpp0290336 155 PDKWNSIALQVLSDKVSFYYDCELRNTT 182 (1017) Q Consensus 155 Dg~WHrlaLsV~g~~VtLyVDC~~~~t~ 182 (1017) ...||..+|....++|++|||-+++.+. T Consensus 130 ~~~fHtY~ieWtp~~I~~yVDG~~v~~~ 157 (278) T 1umz_A 130 TKEFHYYSVLWNMYMIVFLVDDVPIRVF 157 (278) T ss_dssp TTSCEEEEEEECSSEEEEEETTEEEEEE T ss_pred CCCCEEEEEEEeCCeEEEEECCEEEEEE Confidence 5799999999999999999999887664No 86>1ajo_A CPA16M-127, circularly permuted (1-3,1-4)-beta-D-glucan 4- glucanohydrolase CPA16M-127; glucanase, circular permutation; 2.07A {Paenibacillus macerans} SCOP: b.29.1.2 Probab=23.17 E-value=1.7e+02 Score=30.57 Aligned_cols=74 Identities=15% Similarity=0.226 Sum_probs=44.2 Q ss_pred CCCeeEEEEEEeCCeEEEEEcCccceeec--ccCCCcccccCCCeeEEEEec-----cc-ccCCccccceeeeEEeeCcc Q FBpp0290336 155 PDKWNSIALQVLSDKVSFYYDCELRNTTL--VTREPIELVFDSASTLYIGQA-----GS-IIGGKFEGYLEKINVYGNPD 226 (1017) Q Consensus 155 Dg~WHrlaLsV~g~~VtLyVDC~~~~t~~--l~r~~~~l~~~~~~~l~IGq~-----g~-~~~~~F~G~LQ~L~i~~dp~ 226 (1017) ...||..+|.-..+.|++|||-+++.+.. ++..+..|.+ .|.++.. +. ....-+.-.|.-++++.... T Consensus 15 ~~~fH~Y~~eW~~~~i~~~vDg~~~~~~~~~~P~~p~~lil----nl~~g~g~~~W~g~~~~~~p~~m~vDyVrvy~~~~ 90 (214) T 1ajo_A 15 SKGFHTYAFDWQPGYIKWYVDGVLKHTATANIPSTPGKIMM----NLWNGTGVDDWLGSYNGANPLYAEYDWVKYTSNQT 90 (214) T ss_dssp GGSCEEEEEEEETTEEEEEETTEEEEEECSSCCCSCBEEEE----EEEEBSSCHHHHCCCCCCCCEEEEEEEEEEEESST T ss_pred cCCcEEEEEEEeCCeEEEEECCEEEEEEcCCCCCCCcEEEE----EEEecCCccccCCCCCcCCCceEEEEEEEEeeccc Confidence 56899999999999999999999887743 3333333322 3455510 10 00122344566677776654 Q ss_pred cccccC Q FBpp0290336 227 AINVTC 232 (1017) Q Consensus 227 ~a~~~C 232 (1017) .....| T Consensus 91 ~~~~~d 96 (214) T 1ajo_A 91 GGSFFE 96 (214) T ss_dssp TCCEEE T ss_pred cceeec Confidence 433333No 87>2uwa_A Cellulase; glycoside hydrolase, xyloglucan-endo-transferase, hydrolase, glycosidase, family GH16, tropaeolum majus xyloglucanase; 1.8A {Tropaeolum majus} SCOP: b.29.1.0 PDB: 2uwc_A 2uwb_A 2vh9_A* Probab=22.84 E-value=8.3e+02 Score=26.35 Aligned_cols=75 Identities=12% Similarity=0.167 Sum_probs=46.7 Q ss_pred CCCeeEEEEEEeCCeEEEEEcCccceeec------ccCCCcccccCCCeeEEEEec-----cc--cc--CCccccceeee Q FBpp0290336 155 PDKWNSIALQVLSDKVSFYYDCELRNTTL------VTREPIELVFDSASTLYIGQA-----GS--II--GGKFEGYLEKI 219 (1017) Q Consensus 155 Dg~WHrlaLsV~g~~VtLyVDC~~~~t~~------l~r~~~~l~~~~~~~l~IGq~-----g~--~~--~~~F~G~LQ~L 219 (1017) ...||..+|....++|++|||-+++.+.. ++..+..|. ..|++|.. +. +. ..-|.-.|..| T Consensus 141 ~~~fHtY~ieWtp~~I~~yVDg~~v~~~~~~~~~~~P~~Pm~ii----lnlw~gg~Wa~~gG~~~~d~~~~P~~m~vd~V 216 (274) T 2uwa_A 141 TQDYHNYAIYWTPSEIIFFVDDVPIRRYPRKSDATFPLRPLWVY----GSVWDASSWATENGKYKADYRYQPFVGKYEDF 216 (274) T ss_dssp TSSCEEEEEEECSSEEEEEETTEEEEEEECCCGGGSCCSCEEEE----EEEEECTTTTBGGGTBCCCGGGCCEEEEEEEE T ss_pred CCCcEEEEEEEccCeEEEEECCEEEEEEccccccCCCCCccEEE----EeeEecCCccccCCccccCCccCCEEEEEEEE Confidence 57999999999999999999999876642 222222221 23444332 10 00 12367788899 Q ss_pred EEeeCcccccccCC Q FBpp0290336 220 NVYGNPDAINVTCM 233 (1017) Q Consensus 220 ~i~~dp~~a~~~C~ 233 (1017) +|+.-.......|. T Consensus 217 rV~~~~~~~~~~C~ 230 (274) T 2uwa_A 217 KLGSCTVEAASSCN 230 (274) T ss_dssp EEEEEETTSCTTCC T ss_pred EEEecCCCCCCCcC Confidence 99875544445563No 88>3h0o_A Beta-glucanase; 1,3-1,4-beta-D-glucanase, CH-PI stacking interactions, TRIS inhibition, hydrolase, glycosidase; 1.40A {Fibrobacter succinogenes} SCOP: b.29.1.2 PDB: 1mve_A 1zm1_A* 3hr9_A 2r49_A 3axd_A 3axe_A* Probab=21.21 E-value=8.3e+02 Score=25.73 Aligned_cols=29 Identities=14% Similarity=0.170 Sum_probs=26.0 Q ss_pred CCCCeeEEEEEEeCCeEEEEEcCccceee Q FBpp0290336 154 VPDKWNSIALQVLSDKVSFYYDCELRNTT 182 (1017) Q Consensus 154 ~Dg~WHrlaLsV~g~~VtLyVDC~~~~t~ 182 (1017) ....||..+|.-..++|++|||-+++.+. T Consensus 91 ~~~~fH~Y~ieW~~~~I~wyVDg~~~~t~ 119 (240) T 3h0o_A 91 ADQAFHTYGLEWTPNYVRWTVDGQEVRKT 119 (240) T ss_dssp TTTSCEEEEEEECSSCEEEEETTEEEEEE T ss_pred CCCCcEEEEEEEECCEEEEEECCEEEEEE Confidence 45799999999999999999999988764No 89>3o5s_A Beta-glucanase; glycosyl hydrolase, beta-jelly roll, hydrolase; HET: B3P; 2.20A {Bacillus subtilis} SCOP: b.29.1.2 PDB: 3d6e_A Probab=20.80 E-value=5.5e+02 Score=27.00 Aligned_cols=28 Identities=18% Similarity=0.488 Sum_probs=25.5 Q ss_pred CCCeeEEEEEEeCCeEEEEEcCccceee Q FBpp0290336 155 PDKWNSIALQVLSDKVSFYYDCELRNTT 182 (1017) Q Consensus 155 Dg~WHrlaLsV~g~~VtLyVDC~~~~t~ 182 (1017) ...||..+|....+.|++|||-+++.+. T Consensus 165 ~~~fH~Y~~eW~~~~I~~yvDg~~~~~~ 192 (238) T 3o5s_A 165 ANAYHTYAFDWQPNSIKWYVDGQLKHTA 192 (238) T ss_dssp GGSCEEEEEEECSSCEEEEETTEEEEEE T ss_pred CCCCEEEEEEEECCEEEEEECCEEEEEE Confidence 5789999999999999999999988764