Query FBpp0301686 type=protein; loc=3L:join(7012190..7012289,7012739..7013277,7033869..7033964,7034503..7034538,7034635..7034703,7034972..7035038,7035170..7035315,7035744..7035881,7038005..7038151,7041018..7041131,7043466..7043720,7044926..7045003,7045109..7045355,7045534..7045611,7046334..7046488,7046586..7046678,7048842..7048964,7050173..7050187,7050565..7050695,7051242..7051421,7051486..7051722,7051977..7052052); ID=FBpp0301686; name=Mp-PR; parent=FBgn0260660,FBtr0309957; dbxref=FlyBase:FBpp0301686,FlyBase_Annotation_IDs:CG42543-PR,REFSEQ:NP_001246651,GB_protein:AFH04322; MD5=be7e823c399e9b8774f85338b65532db; length=1039; release=r6.06; species=Dmel; Match_columns 1039 No_of_seqs 759 out of 2752 Neff 6.3 Searched_HMMs 35384 No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 1dy2_A Collagen alpha1(XV) cha 100.0 4.3E-62 1.2E-66 488.3 13.1 170 829-1002 6-176 (180) 2 1koe_A Endostatin; angiogenesi 100.0 1E-61 2.9E-66 490.7 12.4 169 831-999 2-171 (172) 3 2uur_A Collagen alpha-1(IX) ch 100.0 8.6E-34 2.4E-38 307.7 18.8 195 34-238 29-235 (245) 4 2erf_A Thrombospondin-1; TSP-1 100.0 4.4E-32 1.2E-36 287.7 15.5 194 34-234 2-209 (209) 5 1za4_A Thrombospondin 1; TSP-1 100.0 9.6E-31 2.7E-35 284.8 16.4 195 34-237 12-222 (251) 6 3hsh_A Endostatin, collagen al 99.6 2.6E-16 7.3E-21 130.2 5.5 53 742-794 3-55 (56) 7 3n3f_A Collagen alpha-1(XV) ch 99.6 6.3E-16 1.8E-20 127.1 5.6 52 743-794 2-53 (54) 8 3sh4_A LG3 peptide; actin disa 98.9 1.4E-08 3.9E-13 105.3 15.6 150 63-224 6-168 (195) 9 3v64_A Low-density lipoprotein 98.9 2.6E-08 7.2E-13 103.0 16.7 152 63-225 3-172 (191) 10 4pbp_A C-reactive protein; acu 98.8 5E-08 1.4E-12 102.0 15.7 158 54-228 2-172 (210) 11 3pve_A Agrin, AGRN protein; mR 98.8 7.1E-08 2E-12 99.7 16.1 150 64-224 11-170 (189) 12 1pz7_A Agrin; structural prote 98.8 7.5E-08 2.1E-12 100.8 16.3 126 87-223 49-183 (204) 13 3flp_A SAP-like pentraxin; phy 98.8 2.4E-07 6.7E-12 97.2 18.2 158 62-228 6-175 (217) 14 2h0b_A Neurexin-1-alpha; B-san 98.7 2E-07 5.6E-12 95.8 15.9 136 87-234 29-178 (184) 15 4avs_A Serum amyloid P-compone 98.7 3.1E-07 8.7E-12 95.6 16.8 149 63-228 7-166 (204) 16 2r16_A Neurexin-1-alpha; beta- 98.7 2.2E-07 6.2E-12 95.6 15.2 125 87-224 28-157 (182) 17 3pvn_A C-reactive protein; pen 98.7 4.6E-07 1.3E-11 94.4 16.6 149 63-228 7-168 (206) 18 3bod_A Neurexin-1-alpha; neure 98.6 7.5E-07 2.1E-11 91.5 15.7 125 87-224 30-156 (178) 19 4c1w_A Neuraminidase; sugar bi 98.5 1.4E-06 3.9E-11 89.8 14.0 136 87-228 34-181 (188) 20 2v73_A CBM40, putative EXO-alp 98.5 3.6E-06 1E-10 87.8 17.2 135 87-228 41-180 (191) 21 3asi_A Neurexin-1-alpha; beta- 98.4 3E-06 8.6E-11 98.2 15.3 127 87-225 250-377 (410) 22 1d2s_A SHBG, sex hormone-bindi 98.4 4.9E-06 1.4E-10 84.8 14.4 123 87-225 27-157 (170) 23 1f5f_A SHBG, sex hormone-bindi 98.3 1.3E-05 3.7E-10 84.2 15.1 128 87-225 39-175 (205) 24 2r1d_A Neurexin-1-beta, neurex 98.2 1.4E-05 3.8E-10 85.7 14.8 125 87-224 64-190 (226) 25 2jd4_A Laminin subunit alpha-1 98.2 1.2E-05 3.5E-10 92.2 15.3 125 87-224 221-356 (383) 26 4qvs_A S-layer domain-containi 98.2 3.1E-06 8.7E-11 89.0 8.3 164 53-228 38-213 (227) 27 1dyk_A Laminin alpha 2 chain; 98.1 2.6E-05 7.4E-10 89.8 14.9 126 87-225 233-369 (394) 28 2r1b_A Neurexin-1-beta, neurex 98.1 3.3E-05 9.3E-10 82.2 14.6 127 87-224 36-192 (220) 29 1a8d_A Tetanus neurotoxin; clo 97.8 0.00063 1.8E-08 80.0 19.5 165 51-228 47-235 (452) 30 1h30_A GAS6, growth-arrest-spe 97.8 0.0003 8.4E-09 81.9 16.8 127 87-223 62-196 (422) 31 2jd4_A Laminin subunit alpha-1 97.8 0.0004 1.1E-08 79.6 16.3 125 87-223 44-176 (383) 32 4dqa_A Uncharacterized protein 97.7 0.00038 1.1E-08 79.4 15.6 148 62-228 140-295 (355) 33 1dyk_A Laminin alpha 2 chain; 97.6 0.0006 1.7E-08 78.5 15.1 126 87-225 58-191 (394) 34 2jkb_A Sialidase B; intramolec 97.6 0.00049 1.4E-08 85.4 14.6 163 62-232 34-210 (686) 35 2vu9_A Botulinum neurotoxin A 97.6 0.0022 6.1E-08 73.5 17.8 169 50-231 48-231 (444) 36 2wjs_A Laminin subunit alpha-2 97.5 0.00063 1.8E-08 83.0 14.1 124 87-223 408-540 (608) 37 3vuo_A NTNHA; protection of bo 97.5 0.0018 5.1E-08 81.6 17.1 155 51-228 864-1025(1196) 38 3asi_A Neurexin-1-alpha; beta- 97.5 0.0012 3.3E-08 76.6 14.8 123 87-224 27-162 (410) 39 1h30_A GAS6, growth-arrest-spe 97.4 0.00062 1.8E-08 79.2 11.9 127 87-221 250-392 (422) 40 3v0a_B NTNH; botulinum neuroto 97.4 0.0026 7.4E-08 80.0 16.5 155 51-228 867-1028(1196) 41 3rsj_A BONT/F; clostridium bot 97.3 0.011 3.2E-07 66.9 18.9 165 50-231 29-212 (413) 42 3pme_A Type C neurotoxin; stru 97.2 0.0043 1.2E-07 70.9 15.3 168 50-231 30-210 (420) 43 3n7l_A Neurotoxin; HCR/D-SA, g 97.2 0.0015 4.3E-08 75.9 11.6 164 51-230 32-219 (424) 44 2wjs_A Laminin subunit alpha-2 97.1 0.005 1.4E-07 75.1 15.5 126 87-222 226-363 (608) 45 1epw_A Bontoxilysin B, botulin 97.0 0.019 5.3E-07 73.3 18.6 153 61-228 894-1067(1290) 46 2nyy_A Botulinum neurotoxin ty 96.9 0.023 6.6E-07 71.5 18.6 168 50-231 900-1083(1295) 47 3qcw_A Neurexin-1-alpha; synap 96.9 0.0075 2.1E-07 79.8 15.3 122 89-222 1084-1206(1245) 48 2vxr_A Botulinum neurotoxin ty 96.8 0.023 6.4E-07 65.1 15.7 166 50-231 76-262 (482) 49 2sli_A Intramolecular trans-si 96.6 0.027 7.5E-07 69.9 16.3 136 85-228 34-184 (679) 50 3qcw_A Neurexin-1-alpha; synap 96.4 0.022 6.4E-07 75.3 14.7 122 87-223 859-993 (1245) 51 3ffz_A Botulinum neurotoxin ty 95.7 0.28 7.9E-06 62.1 18.3 164 51-231 876-1059(1252) 52 4b1m_A Levanase; hydrolase, CB 94.9 0.14 3.9E-06 52.7 10.6 98 79-183 56-158 (185) 53 1ms9_A Trans-sialidase; trans- 91.9 2 5.7E-05 52.9 15.2 127 87-228 495-628 (648) 54 4ccd_A Galactocerebrosidase; h 90.7 2.1 6E-05 52.9 14.0 89 87-182 528-622 (654) 55 1ei8_A Collagen-like peptide ( 89.7 0.53 1.5E-05 34.1 4.4 12 324-335 15-26 (29) 56 4ae2_A Procollagen III, collag 81.9 0.28 7.8E-06 53.6 -0.7 38 677-714 19-56 (256) 57 2zzj_A Glucuronan lyase A; bet 80.9 32 0.0009 36.9 15.0 178 50-236 21-234 (238) 58 1pwb_A SP-D, PSP-D, pulmonary 76.3 0.64 1.8E-05 46.6 0.0 12 984-995 164-175 (177) 59 3zyp_A CIP1; metal binding pro 75.8 9.9 0.00028 40.5 8.9 117 59-183 36-164 (218) 60 1pwb_A SP-D, PSP-D, pulmonary 75.0 1.2 3.5E-05 44.5 1.7 22 681-702 28-49 (177) 61 3w9a_A CCGH131A, putative unch 66.4 26 0.00072 38.0 9.5 76 87-175 93-175 (245) 62 4le3_A Beta-glucanase; GH131, 65.0 30 0.00086 37.6 9.8 77 87-175 94-181 (252) 63 3imm_A Putative secreted glyco 57.2 12 0.00035 39.0 5.0 103 79-182 39-146 (201) 64 2dpr_A Conantokin-T, CON-T; co 54.6 6.5 0.00018 25.4 1.4 12 1027-1038 2-13 (21) 65 3s5q_A Putative glycosylhydrol 52.0 16 0.00046 38.6 5.0 118 65-182 38-159 (214) 66 3u1x_A Putative glycosyl hydro 50.4 23 0.00066 37.8 6.0 103 80-183 72-187 (236) 67 1buu_A Protein (mannose-bindin 46.0 5.2 0.00015 40.0 0.0 12 984-995 153-164 (168) 68 3hbk_A Putative glycosyl hydro 38.5 97 0.0027 33.3 8.5 103 79-183 77-191 (245) 69 3h3l_A Putative sugar hydrolas 38.4 73 0.0021 34.2 7.5 103 80-183 70-180 (241) 70 3i8t_A Galectin-4; S-type lect 35.2 4.1E+02 0.012 26.7 12.4 122 60-182 10-136 (164) 71 3wvj_A Beta-glucanase; thermos 32.9 4.9E+02 0.014 27.0 14.7 28 155-182 143-170 (220) 72 4jqt_A Putative glycosyl hydro 32.5 97 0.0028 36.1 7.9 99 79-182 44-154 (431) 73 1o91_A Collagen alpha 1(VIII) 32.2 12 0.00033 38.6 0.0 55 898-958 70-125 (178) 74 1dyp_A Kappa-carrageenase; hyd 30.8 1.1E+02 0.0031 33.1 7.4 29 155-183 189-217 (271) 75 4qhz_A Putative glycosyl hydro 29.0 41 0.0012 36.4 3.6 92 78-182 86-201 (246) 76 1axk_A Gluxyn-1; bifunctional, 28.1 7.6E+02 0.021 28.5 14.1 68 155-226 83-158 (394) 77 2ayh_A 1,3-1,4-beta-D-glucan 4 26.8 4.4E+02 0.012 27.2 11.0 28 155-182 141-168 (214) 78 3h0o_A Beta-glucanase; 1,3-1,4 24.6 7.1E+02 0.02 26.4 12.3 29 154-182 91-119 (240) 79 1ajo_A CPA16M-127, circularly 24.4 1.7E+02 0.0048 30.7 7.3 74 155-232 15-96 (214) 80 2cws_A Alginate lyase A1-II'; 23.5 7.9E+02 0.022 26.3 13.0 87 87-179 88-182 (237) 81 3iln_A Laminarinase; jelly ROW 23.5 6.5E+02 0.018 26.6 11.8 34 149-182 158-191 (251) 82 3i4i_A 1,3-1,4-beta-glucanase; 23.3 6.2E+02 0.018 26.6 11.5 28 155-182 161-188 (234) 83 3o5s_A Beta-glucanase; glycosy 22.6 5E+02 0.014 27.5 10.6 28 155-182 165-192 (238) 84 4bpz_A Endo-1,3-beta-glucanase 22.1 8.2E+02 0.023 26.0 13.0 32 151-182 179-210 (256) 85 3wv6_A Galectin-9; beta sandwi 21.4 9.4E+02 0.026 26.4 13.3 105 72-182 163-270 (296) 86 2uwa_A Cellulase; glycoside hy 21.4 9E+02 0.025 26.2 16.7 75 155-233 141-230 (274)No 1>1dy2_A Collagen alpha1(XV) chain; angiogenesis inhibitor; 2.0A {Mus musculus} SCOP: d.169.1.5 Probab=100.00 E-value=4.3e-62 Score=488.32 Aligned_cols=170 Identities=52% Similarity=0.973 Sum_probs=163.8 Q ss_pred CCceeEEEEcCCCCCCCCCccchhhHHHHHHHhhcCCCCceeEEEeccccCcccccCCCCC-CCccccCCCcEEecCccc Q FBpp0301686 829 YPRMLRVAALNEPSTGDLQGIRGADFACYRQGRRAGLLGTFKAFLSSRVQNLDTIVRPADR-DLPVVNTRGDVLFNSWKG 907 (1039) Q Consensus 829 ~~~~l~l~a~~~~~~G~~~Gi~GAD~~C~~~a~~~g~~gt~rA~Ls~~~~~~~~~V~~~dr-~~p~vn~~g~vl~~~~~~ 907 (1039) +.++|||||||+|++|||+ ||++||+|||++|++||||||||+++||+++||+++|| ++||||+||+|||+||++ T Consensus 6 ~~~~L~lvALN~P~sG~m~----AD~~C~~qAraaGl~gTfRAfLSs~~qdl~~iV~~~DR~~~PivNlkGevLf~sw~~ 81 (180) T 1dy2_A 6 ERPVLHLVALNTPVAGDIR----ADFQCFQQARAAGLLSTFRAFLSSHLQDLSTVVRKAERFGLPIVNLKGQVLFNNWDS 81 (180) T ss_dssp -CCCEEEEECSSCBCSBCC----HHHHHHHHHHHTTCCSCEEESSCBTTBCGGGSSCGGGSSSCCEECTTSCEEESCSGG T ss_pred CCccEEEEEcCCCCCCCch----HHHHHHHHHHHhCCCCceEEEeecccccCccccCHhHcCCCCeEcCCCCEEecCHHH Confidence 4578999999999999999 99999999999999999999999999999999999999 799999999999999999 Q ss_pred cccCCCCcccCCCceeecCCCccCCCCCCCCceEEecCCCCcccccCcccCcccCCCCCceeecccCCcccccccccccc Q FBpp0301686 908 IFNGQGGFFSQAPRIYSFSGKNVMTDSTWPMKMVWHGSLPNGERSMDTYCDAWHSGDHLKGSFASNLDGHKLLEQKRQSC 987 (1039) Q Consensus 908 l~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~k~vW~Gs~~~g~~~~~~~C~~W~s~~~~~~g~as~~~~~~~~~~~~~~C 987 (1039) ||++++++|+.+.+||+||+||||+|++||||.|||||++||++.+++||++|||++.+++|+||+|.+++||.|+.+|| T Consensus 82 lf~g~~~~l~~~~~Iysfdg~dVl~d~~wP~K~vWhGS~~~G~r~~d~~C~~W~s~~~~~~G~Assl~~g~ll~q~~~sC 161 (180) T 1dy2_A 82 IFSGDGGQFNTHIPIYSFDGRDVMTDPSWPQKVVWHGSNPHGVRLVDKYCEAWRTTDMAVTGFASPLSTGKILDQKAYSC 161 (180) T ss_dssp GGSSSCCBCCTTSCCBBTTSCBTTTCTTCSSCEEECCBCTTSCBCTTSBHHHHBCCCTTCEEEEEEGGGTBSSCCEEEET T ss_pred HhCCCCCccCCCCCeeccCCcccccCCCccccccccCCCCCCCCcccccccCCccCCCCceEeeeecCCCCcccCcccCC Confidence 99999889999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred cCCcEEEEEecccHH Q FBpp0301686 988 DSKLIILCVEALSQD 1002 (1039) Q Consensus 988 ~~~~~~lCve~~~~~ 1002 (1039) +++||||||||+... T Consensus 162 ~~~~ivLCIEn~~~~ 176 (180) T 1dy2_A 162 ANRLIVLCIENSFMT 176 (180) T ss_dssp TSCBBCEEEECCC-- T ss_pred CCceEEEEEEccccc Confidence 999999999998653No 2>1koe_A Endostatin; angiogenesis inhibitor, collagen XVIII, non-collageneous domain, heparin-binding domain; 1.50A {Mus musculus} SCOP: d.169.1.5 PDB: 1dy0_A 1dy1_A 1bnl_A Probab=100.00 E-value=1e-61 Score=490.73 Aligned_cols=169 Identities=47% Similarity=0.913 Sum_probs=165.8 Q ss_pred ceeEEEEcCCCCCCCCCccchhhHHHHHHHhhcCCCCceeEEEeccccCcccccCCCCC-CCccccCCCcEEecCccccc Q FBpp0301686 831 RMLRVAALNEPSTGDLQGIRGADFACYRQGRRAGLLGTFKAFLSSRVQNLDTIVRPADR-DLPVVNTRGDVLFNSWKGIF 909 (1039) Q Consensus 831 ~~l~l~a~~~~~~G~~~Gi~GAD~~C~~~a~~~g~~gt~rA~Ls~~~~~~~~~V~~~dr-~~p~vn~~g~vl~~~~~~l~ 909 (1039) ++|||||||+||+|||+||+|||++||+||+++|++||||||||+++|++++||+++|| ++||||+||||||+||+||| T Consensus 2 ~~l~lvaln~p~~GnlgGi~GAD~~C~~~A~aaGl~gtfRAfLSs~~q~~~~iV~~~dr~~~P~vN~kg~vl~~~~~~l~ 81 (172) T 1koe_A 2 PVLHLVALNTPLSGGMRGIRGADFQCFQQARAVGLSGTFRAFLSSRLQDLYSIVRRADRGSVPIVNLKDEVLSPSWDSLF 81 (172) T ss_dssp CCEEEEECSSCBCSCSSHHHHHHHHHHHHHHHTTCCSCEEESCCBTTBCGGGGSCGGGTTTCCEECTTCCEEESCHHHHT T ss_pred CceEEEEeCCCcCCCcccchhHHHHHHHHHHhcCCCCeeEEEEEcccCCccceeccccccCCCeECCcCcEEeCCHHHhc Confidence 57999999999999999999999999999999999999999999999999999999999 79999999999999999999 Q ss_pred cCCCCcccCCCceeecCCCccCCCCCCCCceEEecCCCCcccccCcccCcccCCCCCceeecccCCcccccccccccccC Q FBpp0301686 910 NGQGGFFSQAPRIYSFSGKNVMTDSTWPMKMVWHGSLPNGERSMDTYCDAWHSGDHLKGSFASNLDGHKLLEQKRQSCDS 989 (1039) Q Consensus 910 ~~~~~~~~~~~~i~~f~~~~~~~~~~~~~k~vW~Gs~~~g~~~~~~~C~~W~s~~~~~~g~as~~~~~~~~~~~~~~C~~ 989 (1039) ++++++|+++..||+||+||||+|++||+|+|||||++||+|.+++||++|||++.+++|+||+|++++||+|+.++|++ T Consensus 82 ~~~~~~~~~~~~i~sfn~~dvl~d~~wp~k~vWtGs~~~G~~~~~~~C~~Wts~~~~~~G~assl~~~~ll~q~~~sCs~ 161 (172) T 1koe_A 82 SGSQGQLQPGARIFSFDGRDVLRHPAWPQKSVWHGSDPSGRRLMESYCETWRTETTGATGQASSLLSGRLLEQKAASCHN 161 (172) T ss_dssp SSSCSBCCTTCCCBBTTSCBTTTCTTSSSCEEECCBCTTSCBCTTSBHHHHTCCCTTCEEEEEEGGGTBSCCCEEEETTS T ss_pred CCCCccccCCCceEccCCCccccCCCCccceeEECCCCCCcCcCCCcccCCcCCCCCceEeeccCCCCCcccCcCCCcCC Confidence 99999999999999999999999999999999999999999988999999999999999999999999999999999999 Q ss_pred CcEEEEEecc Q FBpp0301686 990 KLIILCVEAL 999 (1039) Q Consensus 990 ~~~~lCve~~ 999 (1039) +|+||||||+ T Consensus 162 ~~~vLCIE~~ 171 (172) T 1koe_A 162 SYIVLCIENS 171 (172) T ss_dssp CBBCEEEECC T ss_pred CcEEEEEeec Confidence 9999999996No 3>2uur_A Collagen alpha-1(IX) chain; glycoprotein, hydroxylation, structural protein, NC4, collagen IX, polymorphism, extracellular matrix; 1.8A {Homo sapiens} Probab=100.00 E-value=8.6e-34 Score=307.74 Aligned_cols=195 Identities=18% Similarity=0.278 Sum_probs=167.3 Q ss_pred cccccccccccccCC---CCCcEEEccCCCC-CcceEEcCCccccCcccccCCCCCc-ceEEEEEEeecCCCC---ceEE Q FBpp0301686 34 DALAEYTLTDIMNNN---QFAGIEFGEAEDG-FPAFRFLQTADVKSPYRMLLPEKLY-EFAILITFRQSSLKG---GYLF 105 (1039) Q Consensus 34 D~l~e~dL~~l~g~~---~~~GV~~v~G~d~-~pAy~f~~~a~l~~pt~~~fp~~~~-eFSllaT~R~~~~~~---g~Lf 105 (1039) |.++.|||+++++.+ .+.||++++|.+. ++||+|.+.+++++|++++||+.|+ ||||++|||+.+.+. |+|| T Consensus 29 ~~~~~~Dll~~l~l~~~~~~~gv~~v~G~~~~~~ay~~~~~a~l~~pt~~~fP~~lp~eFsi~~tlr~~~~~~~~~~~Lf 108 (245) T 2uur_A 29 DDLPGFDLISQFQVDKAASRRAIQRVVGSATLQVAYKLGNNVDFRIPTRNLYPSGLPEEYSFLTTFRMTGSTLKKNWNIW 108 (245) T ss_dssp -CCCEEEHHHHTTHHHHHTTTSSCEEECSSTTCEEEEECSSCCCEEEHHHHCTTCCCSSEEEEEEEECCGGGGGCEEEEE T ss_pred CCCCCcceeHhhCCCCcCCCCCeeEccCCCCCccEEEECCCcccCcchHHhccccCCCCEEEEEEEEccCCCCCCceEEE Confidence 566778888877766 4899999999764 8999999999999999999999999 999999999865443 5999 Q ss_pred EEEeCCCCeEEEEEEEcccccCceEEEEEEEeccCCcceeEEEeee--ccCCCCceEEEEEEeCCeEEEEEccccceeee Q FBpp0301686 106 SVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLASFGV--AHVPDKWNSIALQVLSDKVSFYYDCELRNTTL 183 (1039) Q Consensus 106 sI~~~~d~~~qlgL~lsg~~~~~~~i~L~Y~~~~~~~~q~~~sF~v--~laDg~WHrlaLsV~g~~VtLyVDC~~~~t~~ 183 (1039) +|++. ++.+||+|++++..+ +|.|+|++.++.. +.++|.+ +++|++||||+|+|++++|+|||||+++.++. T Consensus 109 si~~~-~~~~qlgl~l~~~~~---~v~~~y~~~~G~~--~~~~F~~~~~l~dg~WH~lalsV~~~~VtLyvDC~~~~~~~ 182 (245) T 2uur_A 109 QIQDS-SGKEQVGIKINGQTQ---SVVFSYKGLDGSL--QTAAFSNLSSLFDSQWHKIMIGVERSSATLFVDCNRIESLP 182 (245) T ss_dssp EEECT-TSCEEEEEEEEGGGT---EEEEEEEBTTSCE--EEEEECCCGGGCSSSCEEEEEEEETTEEEEEETTEEEEEEE T ss_pred EEEcC-CCCEEEEEEEcCCCC---EEEEEEECCCCCE--EEEEECCCCccCCCCEEEEEEEEECCEEEEEEeCCcCcccc Confidence 99997 689999999999754 8999999876543 6789965 99999999999999999999999999999998 Q ss_pred ccCCCcceeccCCeeEEEEecCcccCc-ccccceeeeEEeeCcccc-cccCCCCCCC Q FBpp0301686 184 VTREPIELVFDSASTLYIGQAGSIIGG-KFEGYLEKINVYGNPDAI-NVTCMPPPKA 238 (1039) Q Consensus 184 l~r~~~~l~~~~~~~l~IGq~g~~~~~-~F~G~LQ~L~i~~dp~~~-~~~C~~~~~~ 238 (1039) +.+. .. ++.++.++||++.. .++ .|+|+||+|+|+|||+++ +++|++++.. T Consensus 183 l~~~-~~--l~~~g~~~lG~~~~-~~~~~f~G~lQ~l~i~~~p~~a~~~~C~e~~~~ 235 (245) T 2uur_A 183 IKPR-GP--IDIDGFAVLGKLAD-NPQVSVPFELQWMLIHCDPLRPRRETCHELPAR 235 (245) T ss_dssp CCCB-CC--CCCSSEEEEEEESS-CTTCBCCEEEEEEEEESCTTGGGGCCCTTCC-- T ss_pred ccCC-Cc--cCcCCEEEEEeccC-CCCCeEEEEEEEEEEEcCCCchhhCccccCCCC Confidence 8763 33 45578999999964 455 899999999999999998 9999998853No 4>2erf_A Thrombospondin-1; TSP-1, N-terminal TSPN, HBD, sugar binding protein; 1.45A {Homo sapiens} SCOP: b.29.1.4 PDB: 2es3_A 1z78_A Probab=99.97 E-value=4.4e-32 Score=287.70 Aligned_cols=194 Identities=16% Similarity=0.191 Sum_probs=161.7 Q ss_pred cccccccccccccCCC-CCcEEEccCCCC-CcceEEcCCccccCcccccCCCC-----Cc-ceEEEEEEeecCCCCceEE Q FBpp0301686 34 DALAEYTLTDIMNNNQ-FAGIEFGEAEDG-FPAFRFLQTADVKSPYRMLLPEK-----LY-EFAILITFRQSSLKGGYLF 105 (1039) Q Consensus 34 D~l~e~dL~~l~g~~~-~~GV~~v~G~d~-~pAy~f~~~a~l~~pt~~~fp~~-----~~-eFSllaT~R~~~~~~g~Lf 105 (1039) |+++.|||+++++.+. +.||++++|.+. ++||+|.+.+++.++++++||+. |+ ||||++|||+.+++.++|| T Consensus 2 ~d~~~~Dll~~~~l~~~~~gv~~~~G~~~~~~ay~~~~~a~l~~~t~~~~P~~~~~l~~~~~Fsi~~tlr~~~~~~~~L~ 81 (209) T 2erf_A 2 GDNSVFDIFELTGAARKGSGRRLVKGPDPSSPAFRIEDANLIPPVPDDKFQDLVDAVRTEKGFLLLASLRQMKKTRGTLL 81 (209) T ss_dssp CTTCEEEHHHHHTTTTSCSSEEEECCSSTTSCEEEESCGGGSCCCCHHHHHHHHHHHHHHTEEEEEEEEEECTTCEEEEE T ss_pred CCcceeeehhhhCCCCccCceEEeeCCCCCccEEEEecccccccCchHhccchhhhhcCCCcEEEEEEEEeCCCCCeEEE Confidence 6678899999998886 799999999886 99999999999999999999998 88 9999999999999999999 Q ss_pred EEEeCCCCeEEEEEEEcccccCceEEEEEEEeccCCcceeEEEe-eeccCCCCceEEEEEEeCCeEEEEEccccceeeec Q FBpp0301686 106 SVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLASF-GVAHVPDKWNSIALQVLSDKVSFYYDCELRNTTLV 184 (1039) Q Consensus 106 sI~~~~d~~~qlgL~lsg~~~~~~~i~L~Y~~~~~~~~q~~~sF-~v~laDg~WHrlaLsV~g~~VtLyVDC~~~~t~~l 184 (1039) +|++..+..+||+|++++..+ +|.|+|++.+ .++.++| .++++|++||||+|+|++++|+|||||+++.+..+ T Consensus 82 si~~~~~~~~~lgl~l~~~~~---~l~~~y~~~g---~~~~~~f~~~~l~dg~WH~lal~V~~~~V~LyvDC~~~~~~~l 155 (209) T 2erf_A 82 ALERKDHSGQVFSVVSNGKAG---TLDLSLTVQG---KQHVVSVEEALLATGQWKSITLFVQEDRAQLYIDCEKMENAEL 155 (209) T ss_dssp EEEETTSSCEEEEEEEETTTT---EEEEEEEETT---EEEEEEESSCCCCSSSEEEEEEEEETTEEEEEETTTEEEEEEC T ss_pred EEECCCCCEEEEEEEEeCCCc---EEEEEEecCC---CEEEEEEcCccccCCcEEEEEEEEECCEEEEEECCcccceeEc Confidence 999985545789999998744 8999999743 3367788 59999999999999999999999999999999988 Q ss_pred cCCCcceeccCCeeEEEEecCcc--cCcccccceeeeEEeeCcccc---cccCCC Q FBpp0301686 185 TREPIELVFDSASTLYIGQAGSI--IGGKFEGYLEKINVYGNPDAI---NVTCMP 234 (1039) Q Consensus 185 ~r~~~~l~~~~~~~l~IGq~g~~--~~~~F~G~LQ~L~i~~dp~~~---~~~C~~ 234 (1039) ++.... .++.+..+++|++... ..++|+|+||+|+|+++|+++ +..||+ T Consensus 156 ~~~~~~-~~~~g~~~~~G~~~~~~g~~~~F~G~iq~l~i~~~~~~~~~~~~~~c~ 209 (209) T 2erf_A 156 DVPIQS-VFTRDLASIARLRIAKGGVNDNFQGVLQNVRFVFGTTPEDILRNKGCS 209 (209) T ss_dssp SSCGGG-TCCTTHHHHEEEEESCCTTTCBCCEEEEEEEEECSCCHHHHHHTTCCC T ss_pred CCcccc-ccCCCCeeeEEEEecCCCCcccceEEeeEEEEEeCCCHHHhhhhccCC Confidence 875212 1333434456665321 124899999999999999776 566764No 5>1za4_A Thrombospondin 1; TSP-1, NTSP-1, HBD, arixtra, cell adhesion; HET: SGN; 1.90A {Homo sapiens} SCOP: b.29.1.4 PDB: 2ouh_A 2ouj_A Probab=99.97 E-value=9.6e-31 Score=284.81 Aligned_cols=195 Identities=17% Similarity=0.265 Sum_probs=156.5 Q ss_pred cccccccccccccCCC-CCcEEEccCCCC-CcceEEcCCccccCcccccCCC---CC--c-ceEEEEEEeecCCCCceEE Q FBpp0301686 34 DALAEYTLTDIMNNNQ-FAGIEFGEAEDG-FPAFRFLQTADVKSPYRMLLPE---KL--Y-EFAILITFRQSSLKGGYLF 105 (1039) Q Consensus 34 D~l~e~dL~~l~g~~~-~~GV~~v~G~d~-~pAy~f~~~a~l~~pt~~~fp~---~~--~-eFSllaT~R~~~~~~g~Lf 105 (1039) ++...|||+++++.+. +.||++++|.+. ++||+|.+.+.+..+++++||+ .| + ||||++|||+.+++.|+|| T Consensus 12 ~d~~~~DLl~~lgl~~~~~GV~~~~G~~~~~~Ay~~~~~~~~~~~t~~~~P~g~~~~~~p~eFsi~~tlr~~~~~~~~Lf 91 (251) T 1za4_A 12 GDNSVFDIFELTGAARKGSGRRLVKGPDPSSPAFRIEDANLIPPVPDDKFQDLVDAVRTEKGFLLLASLRQMKKTRGTLL 91 (251) T ss_dssp ---CEEEHHHHHCCCCTTSSEEEECCSSTTSCEEEESCGGGSCCCCHHHHHHHHHHHHHHTEEEEEEEEEECTTCEEEEE T ss_pred CcccCcceehhhCCCCccCCeEEccCCCCCccEEEEcCcccccCChhHhCcchhhccCCCCcEEEEEEEEecCCCCcEEE Confidence 5688899999999886 689999999886 9999999989999999999999 48 8 9999999999999999999 Q ss_pred EEEeCCCCeEEEEEEEcccccCceEEEEEEEeccCCcceeEEEe-eeccCCCCceEEEEEEeCCeEEEEEccccceeeec Q FBpp0301686 106 SVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLASF-GVAHVPDKWNSIALQVLSDKVSFYYDCELRNTTLV 184 (1039) Q Consensus 106 sI~~~~d~~~qlgL~lsg~~~~~~~i~L~Y~~~~~~~~q~~~sF-~v~laDg~WHrlaLsV~g~~VtLyVDC~~~~t~~l 184 (1039) +|++..+..++|+|+|++..+ +|.|+|++. + .+++++| .++++|++||||+|+|++++|+|||||+++.++.+ T Consensus 92 si~d~~~~~q~lgv~l~g~~~---~l~~~y~~~-G--~~~~~~f~~~~L~dg~WH~lalsV~~~~VtLyvDC~~~~~~~l 165 (251) T 1za4_A 92 ALERKDHSGQVFSVVSNGKAG---TLDLSLTVQ-G--KQHVVSVEEALLATGQWKSITLFVQEDRAQLYIDCEKMENAEL 165 (251) T ss_dssp EEEETTSSCEEEEEEEETTTT---EEEEEEEET-T--EEEEEEESSCCCCSSSCEEEEEEEETTEEEEEETTSCCEEEEC T ss_pred EEEcCCCCEEEEEEEEeCCCc---EEEEEEecC-C--CEEEEEEeccccCCCcEEEEEEEEECCEEEEEECCcccccccc Confidence 999985555568999998754 899999984 3 3367888 69999999999999999999999999999999988 Q ss_pred cCCCcceeccCC----eeEEEEecCcccCcccccceeeeEE--eeCcccc-cccCCCCCC Q FBpp0301686 185 TREPIELVFDSA----STLYIGQAGSIIGGKFEGYLEKINV--YGNPDAI-NVTCMPPPK 237 (1039) Q Consensus 185 ~r~~~~l~~~~~----~~l~IGq~g~~~~~~F~G~LQ~L~i--~~dp~~~-~~~C~~~~~ 237 (1039) ++....+ +..+ +.+++++. . ..++|+|+||+|+| +|+++++ ++.||+++. T Consensus 166 ~~~~~~~-~~~G~~~~g~~~~~~g-~-~~~~f~G~lq~L~Iv~~~d~~~a~~~~~Ce~~~ 222 (251) T 1za4_A 166 DVPIQSV-FTRDLASIARLRIAKG-G-VNDNFQGVLQNVRFVFGTTPEDILRNKGCSSST 222 (251) T ss_dssp SSCGGGT-SCTTGGGTEEEEESCC-S-TTCBCCEEEEEEEEECSCCHHHHHHHTTCC--- T ss_pred cCCcccc-cCCCcEEEEEEEecCC-C-CccceEEEEEEEEEEccCChhhhccccCCCCCC Confidence 8752222 2233 33333332 1 23589999999999 7888776 567777665No 6>3hsh_A Endostatin, collagen alpha-1(XVIII) chain; extracellular matrix, basement membrane, collagen trimerization domain, folding, association; 1.80A {Homo sapiens} PDB: 3hon_A Probab=99.62 E-value=2.6e-16 Score=130.21 Aligned_cols=53 Identities=26% Similarity=0.477 Sum_probs=51.3 Q ss_pred CceeeecCHHHHhhhccCCCCCcEEEEeccceEEEEEccCceeeccccccccC Q FBpp0301686 742 PGAVTFQNIDEMTKKSALNPPGTLAYITEEEALLVRVNKGWQYIALGTLVPIA 794 (1039) Q Consensus 742 pg~~~~~~~~~m~~~~~~s~~Gtl~y~~~~~~l~vrv~~G~~~i~lg~~~p~~ 794 (1039) .|+++|+|+++|+++++.+++|||+|++|++||||||+||||+|||+.++|++ T Consensus 3 ~gv~~~~t~~~ml~~~~~~~eGtL~yv~d~~eLyiRVr~Gwr~V~Lg~~~pip 55 (56) T 3hsh_A 3 SGVRLWATRQAMLGQVHEVPEGWLIFVAEQEELYVRVQNGFRKVQLEARTPLP 55 (56) T ss_dssp CCEEEESSHHHHHHHGGGSCTTCEEEETTTTEEEEEETTEEEEECEEEEEECC T ss_pred CcEEEEecHHHHHhhCccCCCeEEEEEEecceEEEEEcCcEEEEeecccccCC Confidence 47999999999999999999999999999999999999999999999999986No 7>3n3f_A Collagen alpha-1(XV) chain; extracellular matrix, basement membrane, collagen trimerization domain, folding, association, chain selection helix; 2.00A {Homo sapiens} Probab=99.60 E-value=6.3e-16 Score=127.11 Aligned_cols=52 Identities=35% Similarity=0.742 Sum_probs=49.9 Q ss_pred ceeeecCHHHHhhhccCCCCCcEEEEeccceEEEEEccCceeeccccccccC Q FBpp0301686 743 GAVTFQNIDEMTKKSALNPPGTLAYITEEEALLVRVNKGWQYIALGTLVPIA 794 (1039) Q Consensus 743 g~~~~~~~~~m~~~~~~s~~Gtl~y~~~~~~l~vrv~~G~~~i~lg~~~p~~ 794 (1039) ++++|+|+++|+++++.+++|||+|++|+++|||||++|||+||||+++|++ T Consensus 2 ~v~~~~t~~~M~~~~~~~~eGtL~yv~d~~eLyiRVr~Gwr~V~Lg~~ip~p 53 (54) T 3n3f_A 2 LVTAFSNMDDMLQKAHLVIEGTFIYLRDSTEFFIRVRDGWKKLQLGELIPIP 53 (54) T ss_dssp CEEEESSHHHHHTTGGGSCTTEEEEETTTTEEEEEETTEEEECCCCCCCCCC T ss_pred CcEEEecHHHHHhhCccCCCeEEEEEEecceEEEEEcCceeeeeecccccCC Confidence 4799999999999999999999999999999999999999999999999874No 8>3sh4_A LG3 peptide; actin disassambly, integrin alpha12 BETA1, metal binding Pro; 1.50A {Homo sapiens} SCOP: b.29.1.0 PDB: 3sh5_A Probab=98.93 E-value=1.4e-08 Score=105.32 Aligned_cols=150 Identities=12% Similarity=0.100 Sum_probs=101.1 Q ss_pred cceEEcCCccccCcccccCCCC-Cc-ceEEEEEEeecCCCCceEEEEEeC----CCCeEEEEEEEcccccCceEEEEEEE Q FBpp0301686 63 PAFRFLQTADVKSPYRMLLPEK-LY-EFAILITFRQSSLKGGYLFSVVNP----LDTVVQLGVHLSPVVKNSYNVSLVYT 136 (1039) Q Consensus 63 pAy~f~~~a~l~~pt~~~fp~~-~~-eFSllaT~R~~~~~~g~LfsI~~~----~d~~~qlgL~lsg~~~~~~~i~L~Y~ 136 (1039) .+..|.....+..+... |+.. .. +|+|.++||.... .+.||.+.+. .....+|.|+|..- .|.|.|. T Consensus 6 ~~~~F~g~sy~~~~~~~-~~~~~~~~~~~is~~frT~~~-~Glll~~~~~~~~~~~~~d~~~l~l~~G-----~l~~~~~ 78 (195) T 3sh4_A 6 YGAYFHDDGFLAFPGHV-FSRSLPEVPETIELEVRTSTA-SGLLLWQGVEVGEAGQGKDFISLGLQDG-----HLVFRYQ 78 (195) T ss_dssp TEEEEEEEEEEEECGGG-GCCCSTTCCEEEEEEEEECCS-SEEEEEECCCTTCTTSTTCEEEEEEETT-----EEEEEEE T ss_pred cccEECCCceEEECccc-ccccccCCCcEEEEEEEeCCC-CeEEEEccCcccCCCCCCCeEEEEEECC-----EEEEEEE Confidence 45666655666655543 3332 34 8999999997654 4688876541 23456888888654 4778776 Q ss_pred eccCCcceeEEEeeeccCCCCceEEEEEEeCCeEEEEEccccceeeeccCCCcceeccCCeeEEEEecCcc-------cC Q FBpp0301686 137 QADQNIGRKLASFGVAHVPDKWNSIALQVLSDKVSFYYDCELRNTTLVTREPIELVFDSASTLYIGQAGSI-------IG 209 (1039) Q Consensus 137 ~~~~~~~q~~~sF~v~laDg~WHrlaLsV~g~~VtLyVDC~~~~t~~l~r~~~~l~~~~~~~l~IGq~g~~-------~~ 209 (1039) ...+. ..+.....+.|++||+|+|...+..++|||||....+...+.....+ +....||||..... .. T Consensus 79 ~g~g~---~~i~s~~~l~Dg~WH~V~v~~~~~~~~L~VD~~~~~~~~~~~~~~~l--~~~~~l~iGG~~~~~~~~~~~~~ 153 (195) T 3sh4_A 79 LGSGE---ARLVSEDPINDGEWHRVTALREGRRGSIQVDGEELVSGRSPGPNVAV--NAKGSVYIGGAPDVATLTGGRFS 153 (195) T ss_dssp CSSCE---EEEEEEEECCSSSCEEEEEEEETTEEEEEETTCCCEEEECCSSCCCC--CCCSCEEESCCTTHHHHTTTSCC T ss_pred CCCCE---EEEEcCCeecCCCeEEEEEEEeCCEEEEEECCcceeeEECCCcccee--cCCCCEEECCCCCcccccccccc Confidence 54332 23334678899999999999999999999999987665444322223 34568999975321 13 Q ss_pred cccccceeeeEEeeC Q FBpp0301686 210 GKFEGYLEKINVYGN 224 (1039) Q Consensus 210 ~~F~G~LQ~L~i~~d 224 (1039) ..|+|-|++|+|.-. T Consensus 154 ~~F~GCi~~v~i~~~ 168 (195) T 3sh4_A 154 SGITGCVKNLVLHSA 168 (195) T ss_dssp CCCSEEEEEEEEEEC T ss_pred CCcEEEeeEEEECCc Confidence 469999999999643No 9>3v64_A Low-density lipoprotein receptor-related protein; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus} SCOP: b.29.1.4 PDB: 3v65_A Probab=98.91 E-value=2.6e-08 Score=102.98 Aligned_cols=152 Identities=14% Similarity=0.171 Sum_probs=101.1 Q ss_pred cceEEcCCccccCcccc-------cCCCC-Cc-ceEEEEEEeecCCCCceEEEEEeCCCCeEEEEEEEcccccCceEEEE Q FBpp0301686 63 PAFRFLQTADVKSPYRM-------LLPEK-LY-EFAILITFRQSSLKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSL 133 (1039) Q Consensus 63 pAy~f~~~a~l~~pt~~-------~fp~~-~~-eFSllaT~R~~~~~~g~LfsI~~~~d~~~qlgL~lsg~~~~~~~i~L 133 (1039) .|+.|.....+..+... .||.. .. +|+|.++||... ..+.||...+..+...+|.|+|..- .|.| T Consensus 3 ~~~~F~G~syv~~~~~~~~~~~~~~~~~~~~~~~~~is~~frT~~-~~glll~~~~~~~~~~~~~l~l~~G-----~l~~ 76 (191) T 3v64_A 3 ETLAFDGRTYIEYLNAVIESELTNEIPAEKALQSNHFELSLRTEA-TQGLVLWIGKAAERADYMALAIVDG-----HLQL 76 (191) T ss_dssp CEEEEESSCCEEEECSCCCHHHHCCCCCCEEESEEEEEEEEECSC-SSEEEEEESCCSTTCCEEEEEEETT-----EEEE T ss_pred cceeECCceeEEecCccccccccccCcccccccceEEEEEEEeCC-CCeEEEEeCCCCCCCCEEEEEEECC-----EEEE Confidence 35666655554444322 23332 34 899999999765 4467776655334567888888543 5778 Q ss_pred EEEeccCCcceeEEEeeeccCCCCceEEEEEEeCCeEEEEEccccceeeeccCCCcceeccCCeeEEEEecCcc------ Q FBpp0301686 134 VYTQADQNIGRKLASFGVAHVPDKWNSIALQVLSDKVSFYYDCELRNTTLVTREPIELVFDSASTLYIGQAGSI------ 207 (1039) Q Consensus 134 ~Y~~~~~~~~q~~~sF~v~laDg~WHrlaLsV~g~~VtLyVDC~~~~t~~l~r~~~~l~~~~~~~l~IGq~g~~------ 207 (1039) .|...++. ..+.....+.|++||+|+|...+..++||||+....+...+.....++ ....||||..... T Consensus 77 ~~~~g~~~---~~~~~~~~v~Dg~WH~V~v~~~~~~~~L~vD~~~~~~~~~~~~~~~l~--~~~~l~iGg~~~~~~~~~~ 151 (191) T 3v64_A 77 SYDLGSQP---VVLRSTVKVNTNRWLRIRAHREHREGSLQVGNEAPVTGSSPLGATQLD--TDGALWLGGLQKLPVGQAL 151 (191) T ss_dssp EEESSSCC---EEEEEEEECTTSSCEEEEEEEETTEEEEEETTSCCEEEECCTTCCCEE--ECSEEEESCCSSCCSSCCS T ss_pred EEECCCCc---EEEEeCCEecCCCcEEEEEEEEccEEEEEECCcceEeeECCCCcccCc--CCCCEEECCCCcccccccc Confidence 88654332 233446778899999999999999999999998776554433323333 3568999976321 Q ss_pred ---cCcccccceeeeEEeeCc Q FBpp0301686 208 ---IGGKFEGYLEKINVYGNP 225 (1039) Q Consensus 208 ---~~~~F~G~LQ~L~i~~dp 225 (1039) ....|+|-|++|+|...+ T Consensus 152 ~~~~~~~F~Gci~~v~i~~~~ 172 (191) T 3v64_A 152 PKAYGTGFVGCLRDVVVGHRQ 172 (191) T ss_dssp CGGGTSBCEEEEEEEEETTEE T ss_pred cccccCCCeEEeeEEEECCEE Confidence 134699999999996443No 10>4pbp_A C-reactive protein; acute phase protein, pentraxin; 1.65A {Danio rerio} PDB: 4pbo_A Probab=98.83 E-value=5e-08 Score=101.99 Aligned_cols=158 Identities=18% Similarity=0.192 Sum_probs=102.2 Q ss_pred EEccCCCCCcceEEcCC---ccccCcccccCCCCCcceEEEEEEeecCC--CCceEEEEEeCCCCeEEEEEEEcccccCc Q FBpp0301686 54 EFGEAEDGFPAFRFLQT---ADVKSPYRMLLPEKLYEFAILITFRQSSL--KGGYLFSVVNPLDTVVQLGVHLSPVVKNS 128 (1039) Q Consensus 54 ~~v~G~d~~pAy~f~~~---a~l~~pt~~~fp~~~~eFSllaT~R~~~~--~~g~LfsI~~~~d~~~qlgL~lsg~~~~~ 128 (1039) +++.|..+ .|+.|... ..+..+....+ ...+|||.++||+... ....||+..+.. .. .|.|.+.... T Consensus 2 ~~~~g~~g-~al~F~g~s~~~~v~~~~~~~~--~~~~fTi~~Wvk~~~~~~~~~~i~s~~~~~-~~-~~~l~~~~~~--- 73 (210) T 4pbp_A 2 EFFKNLSG-KVLQFKTATDNSYVKLYPEKPL--SLSAFTLCMRVATELPLDREVILFAYYTPD-VD-ELNVWRERDG--- 73 (210) T ss_dssp ---CCCTT-EEEEECSCCSSCEEEEECSSCC--CBSEEEEEEEEECCSCTTSCEEEEEEEETT-EE-EEEEEECTTS--- T ss_pred eeeecccC-cEEECCCCCccCeEEEcCCCCC--CcCCEEEEEEEEcCCCCCCCceEEEEEcCC-CC-cEEEEEcCCC--- Confidence 34444333 57888753 33443332211 1229999999999765 467899988753 23 6666665431 Q ss_pred eEEEEEEEeccCCcceeEEEeeeccCCCCceEEEEEEeCC--eEEEEEccccceeeeccCCCcceeccCCeeEEEEecCc Q FBpp0301686 129 YNVSLVYTQADQNIGRKLASFGVAHVPDKWNSIALQVLSD--KVSFYYDCELRNTTLVTREPIELVFDSASTLYIGQAGS 206 (1039) Q Consensus 129 ~~i~L~Y~~~~~~~~q~~~sF~v~laDg~WHrlaLsV~g~--~VtLyVDC~~~~t~~l~r~~~~l~~~~~~~l~IGq~g~ 206 (1039) .+.|.....+. .+.+...+.+++||||++.+.+. .++||||.+++.+..+... ..+.....|+||+... T Consensus 74 -~~~~~~~~~~~-----~~~~~~~~~~~~W~hva~t~d~~~g~~~lYvnG~~~~~~~~~~~---~~~~~~~~l~iG~~~~ 144 (210) T 4pbp_A 74 -RVSLYIQSSKD-----AAFFRLPPLSTLQTHLCVAWESATGLTAFWMDGRRSLHQVYRKG---YSIRSGGTVVLGQDPD 144 (210) T ss_dssp -CEEEEESCSSC-----CEEECCCCCCSSCEEEEEEEETTTCEEEEEETTEECCCEECCTT---CCBCSSCEEEESSCCS T ss_pred -cEEEEEEcCCc-----eEEecCcccCCCEEEEEEEEECCCCcEEEEECCeEccCcccCCC---cEECCCCeEEEccccc Confidence 45555532221 13455677899999999999976 8999999999887544321 1234567899998632 Q ss_pred c------cCcccccceeeeEEeeCcccc Q FBpp0301686 207 I------IGGKFEGYLEKINVYGNPDAI 228 (1039) Q Consensus 207 ~------~~~~F~G~LQ~L~i~~dp~~~ 228 (1039) . ....|.|.|.+|+|+...... T Consensus 145 ~~gg~~~~~~~f~G~idevri~~~aLs~ 172 (210) T 4pbp_A 145 SYVGSFDVDQSFVGEIANLQMWDYVLSS 172 (210) T ss_dssp BTTBCCCGGGCCCEEEEEEEEESSCCCH T ss_pred cCCCccCccccceEEecceEEecccCCH Confidence 1 235799999999999987444No 11>3pve_A Agrin, AGRN protein; mRNA splicing, structural genomics, PSI-2, protein structure initiative; 1.40A {Mus musculus} SCOP: b.29.1.0 Probab=98.82 E-value=7.1e-08 Score=99.69 Aligned_cols=150 Identities=13% Similarity=0.110 Sum_probs=98.1 Q ss_pred ceEEcCCccccCcccccCCCCCc-ceEEEEEEeecCCCCceEEEEEeC-CCCeEEEEEEEcccccCceEEEEEEEeccCC Q FBpp0301686 64 AFRFLQTADVKSPYRMLLPEKLY-EFAILITFRQSSLKGGYLFSVVNP-LDTVVQLGVHLSPVVKNSYNVSLVYTQADQN 141 (1039) Q Consensus 64 Ay~f~~~a~l~~pt~~~fp~~~~-eFSllaT~R~~~~~~g~LfsI~~~-~d~~~qlgL~lsg~~~~~~~i~L~Y~~~~~~ 141 (1039) +..|...+.+..+....++..+. +|+|.++||.... .+.||...+. .....+|.|+|..- .|.|.|....+. T Consensus 11 ~~~F~g~syl~~~~~~~~~~~~~~~~~isl~frT~~~-~GlLl~~~~~~~~~~d~~~l~l~~G-----~l~~~~~~g~~~ 84 (189) T 3pve_A 11 LADFNGFSYLELKGLHTFERDLGEKMALEMVFLARGP-SGLLLYNGQKTDGKGDFVSLALHNR-----HLEFRYDLGKGA 84 (189) T ss_dssp CEEEESSCEEEECCGGGC-------CEEEEEEEESSS-CEEEEEEESCC-CCSCEEEEEEETT-----EEEEEEESSSCE T ss_pred eeEECCCceEEEcCcccccccccceEEEEEEEecCCC-CeEEEEecCCCCCCCCeEEEEEECC-----EEEEEEECCCCe Confidence 35676666666666655554555 8999999998754 4688877753 12356788888653 477777643321 Q ss_pred cceeEEEeeeccCCCCceEEEEEEeCCeEEEEEccccceeeeccCCCcceeccCCeeEEEEecCcc--------cCcccc Q FBpp0301686 142 IGRKLASFGVAHVPDKWNSIALQVLSDKVSFYYDCELRNTTLVTREPIELVFDSASTLYIGQAGSI--------IGGKFE 213 (1039) Q Consensus 142 ~~q~~~sF~v~laDg~WHrlaLsV~g~~VtLyVDC~~~~t~~l~r~~~~l~~~~~~~l~IGq~g~~--------~~~~F~ 213 (1039) ..+.....+.|++||+|+|...+..++||||+....+...+.....++ ....||||..... ....|. T Consensus 85 ---~~~~s~~~v~Dg~WH~V~v~~~~~~~~L~vD~~~~~~~~~~~~~~~l~--~~~~l~iGG~~~~~~~~~~~~~~~~F~ 159 (189) T 3pve_A 85 ---AIIRSKEPIALGTWVRVFLERNGRKGALQVGDGPRVLGESPVPHTMLN--LKEPLYVGGAPDFSKLARGAAVASGFD 159 (189) T ss_dssp ---EEEECSSCCCTTSEEEEEEEEETTEEEEEETTSCCEEEECCSSCCCCC--CCSCEEESCCSCGGGSCGGGCCCSBCE T ss_pred ---EEEeCCCcccCCCeEEEEEEEeCCEEEEEECCCceeeeEcCCCcceec--CCCCEEECccCChhhcccccccCCCCe Confidence 233346678899999999999999999999998765544332222333 3467999865221 135699 Q ss_pred cceeeeEEeeC Q FBpp0301686 214 GYLEKINVYGN 224 (1039) Q Consensus 214 G~LQ~L~i~~d 224 (1039) |-|++|+|... T Consensus 160 GCi~~v~i~~~ 170 (189) T 3pve_A 160 GAIQLVSLRGH 170 (189) T ss_dssp EEEEEEEETTE T ss_pred EEeeEEEECCE Confidence 99999998543No 12>1pz7_A Agrin; structural protein; 1.42A {Gallus gallus} SCOP: b.29.1.4 PDB: 1pz8_A 1pz9_A 1q56_A Probab=98.82 E-value=7.5e-08 Score=100.84 Aligned_cols=126 Identities=13% Similarity=0.154 Sum_probs=88.2 Q ss_pred ceEEEEEEeecCCCCceEEEEEeCCCCeEEEEEEEcccccCceEEEEEEEeccCCcceeEEEeeeccCCCCceEEEEEEe Q FBpp0301686 87 EFAILITFRQSSLKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLASFGVAHVPDKWNSIALQVL 166 (1039) Q Consensus 87 eFSllaT~R~~~~~~g~LfsI~~~~d~~~qlgL~lsg~~~~~~~i~L~Y~~~~~~~~q~~~sF~v~laDg~WHrlaLsV~ 166 (1039) +|+|.++||.... .+.||...+..+...+|.|+|..- .|.|.|...++. ..+.....+.|++||+|+|... T Consensus 49 ~~~is~~frT~~~-~GlLl~~~~~~~~~d~~~l~l~~G-----~l~~~~~~g~g~---~~l~s~~~v~Dg~WH~V~v~~~ 119 (204) T 1pz7_A 49 SNHFELSIKTEAT-QGLILWSGKGLERSDYIALAIVDG-----FVQMMYDLGSKP---VVLRSTVPINTNHWTHIKAYRV 119 (204) T ss_dssp EEEEEEEEEECCS-SEEEEEESCCSTTCCEEEEEEETT-----EEEEEEESSSCC---EEEEEEEECCSSSCEEEEEEEE T ss_pred ceEEEEEEEeCCC-CeEEEEecCCCCCCceEEEEEECC-----EEEEEEECCCCe---EEEECCccccCCCcEEEEEEEE Confidence 7999999997654 567776655323567888888753 477877644332 2334467888999999999999 Q ss_pred CCeEEEEEccccceeeeccCCCcceeccCCeeEEEEecCcc---------cCcccccceeeeEEee Q FBpp0301686 167 SDKVSFYYDCELRNTTLVTREPIELVFDSASTLYIGQAGSI---------IGGKFEGYLEKINVYG 223 (1039) Q Consensus 167 g~~VtLyVDC~~~~t~~l~r~~~~l~~~~~~~l~IGq~g~~---------~~~~F~G~LQ~L~i~~ 223 (1039) +..++||||+....+...+.....|+ ....||||..... ....|.|-|++|+|.- T Consensus 120 ~~~~~L~VD~~~~~~~~~~~~~~~l~--~~~~l~lGG~~~~~~~~~~~~~~~~~F~GCi~~v~in~ 183 (204) T 1pz7_A 120 QREGSLQVGNEAPITGSSPLGATQLD--TDGALWLGGMERLSVAHKLPKAYSTGFIGCIRDVIVDR 183 (204) T ss_dssp TTEEEEEETTSCCEEEECCSSCCCEE--ECCEEEESSCSCCSTTTTSCGGGGSBCEEEEEEEEETT T ss_pred eCEEEEEECCeeeEeeecCCCcceec--CCCCEEECCCCccccccccccccCCCCeEEEeEEEECC Confidence 99999999998875544333223333 3568999875321 1246999999999943No 13>3flp_A SAP-like pentraxin; physiological doubly-stacked heptamer, pentraxin fold, cyclic heptamer, invertebrate lectin, sugar binding protein; 2.30A {Limulus polyphemus} PDB: 3flr_A 3flt_A Probab=98.76 E-value=2.4e-07 Score=97.23 Aligned_cols=158 Identities=15% Similarity=0.179 Sum_probs=103.1 Q ss_pred CcceEEcCC---ccccCcccccCCCCCcceEEEEEEeecCCCCceEEEEEeCCCCeEEEEEEEcccccCceEEEEEEEec Q FBpp0301686 62 FPAFRFLQT---ADVKSPYRMLLPEKLYEFAILITFRQSSLKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQA 138 (1039) Q Consensus 62 ~pAy~f~~~---a~l~~pt~~~fp~~~~eFSllaT~R~~~~~~g~LfsI~~~~d~~~qlgL~lsg~~~~~~~i~L~Y~~~ 138 (1039) ..|+.|... +.+..+....|+ ...+|||.++||+.......||+..+. .....|.|.+.........+.|+. . T Consensus 6 ~~al~F~G~s~~~yv~~~~~~~l~-~~~~fTi~~Wvk~~~~~~~~i~s~~~~-~~~~~~~l~~~~~~~~~~~~~~~~--~ 81 (217) T 3flp_A 6 DVKISFPGTQNPKFPHLRFMQTLP-AVRQLTVCQRIKPFHRNTGYIFSCATS-NQDNQFITSMYVKSDGTLNLGLQV--N 81 (217) T ss_dssp GEEEEECCCBTTBCCEEEESSCBC-CBSEEEEEEEEEESCSSCEEEEEEEET-TEEEEEEEEEEECTTSEEEEEEEE--T T ss_pred CeEEECCCCCccCeEEeccCCCCC-CcCeEEEEEEEEeCCCCCcEEEEEECC-CCCCeEEEEEccCCCcceEEEEEE--C Confidence 457888753 445555543333 122999999999876666789998875 334556666654311111234433 3 Q ss_pred cCCcceeEEEeeeccCCCCceEEEEEEeCC--eEEEEEccccceee-eccCCCcceeccCCeeEEEEecCcc------cC Q FBpp0301686 139 DQNIGRKLASFGVAHVPDKWNSIALQVLSD--KVSFYYDCELRNTT-LVTREPIELVFDSASTLYIGQAGSI------IG 209 (1039) Q Consensus 139 ~~~~~q~~~sF~v~laDg~WHrlaLsV~g~--~VtLyVDC~~~~t~-~l~r~~~~l~~~~~~~l~IGq~g~~------~~ 209 (1039) +.. ...+.....+.+++||||++...+. .++||||.+++.+. .+... ..+.....|+||+.... .. T Consensus 82 g~~--~~~~~~~~~~~~~~W~hva~t~d~~~g~~~lYvnG~~~~~~~~~~~~---~~~~~~~~l~iG~~~~~~gg~~~~~ 156 (217) T 3flp_A 82 ASS--NKYISCPIEIELGQWYHVCHVWSGVDGRMAVYANGSPCGTMENVGKG---HQISAGGTVVIGQEQDKIGGGFEEQ 156 (217) T ss_dssp TCC--CEEEEEEEECCTTSCEEEEEEEETTTTEEEEEETTEEEEEESCSSTT---CCBCSCBEEEESSCCSBTTBCCCGG T ss_pred Ccc--ceEEecCCccCCCCEEEEEEEEECCCCeEEEEECCEEcccccccCcC---cEeCCCCeEEECcccccCCCCcCcC Confidence 322 1233445677899999999999986 89999999998774 22221 12345678999986321 23 Q ss_pred cccccceeeeEEeeCcccc Q FBpp0301686 210 GKFEGYLEKINVYGNPDAI 228 (1039) Q Consensus 210 ~~F~G~LQ~L~i~~dp~~~ 228 (1039) ..|.|.|.+|+|+...... T Consensus 157 ~~f~G~idevri~~~aLs~ 175 (217) T 3flp_A 157 ESWSGELSDLQVWDEALTT 175 (217) T ss_dssp GCCCEEEEEEEEESSCCCH T ss_pred CCceEEeeeEEEECccCCH Confidence 5799999999999987544No 14>2h0b_A Neurexin-1-alpha; B-sandwich, cell adhesion; 2.10A {Bos taurus} SCOP: b.29.1.4 Probab=98.73 E-value=2e-07 Score=95.82 Aligned_cols=136 Identities=17% Similarity=0.207 Sum_probs=92.2 Q ss_pred ceEEEEEEeecCCCCceEEEEEeCCCCeEEEEEEEcccccCceEEEEEEEeccCCcceeEEEe-eeccCCCCceEEEEEE Q FBpp0301686 87 EFAILITFRQSSLKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLASF-GVAHVPDKWNSIALQV 165 (1039) Q Consensus 87 eFSllaT~R~~~~~~g~LfsI~~~~d~~~qlgL~lsg~~~~~~~i~L~Y~~~~~~~~q~~~sF-~v~laDg~WHrlaLsV 165 (1039) +|+|.++||... ..++||..- +...+|.|+|..- .|.|.|...++.. ...+.. ...+.|++||+|+|.. T Consensus 29 ~~~i~l~frT~~-~~GlLl~~~---~~~d~~~l~l~~G-----~l~~~~~~g~g~~-~~~~~~~~~~l~Dg~WH~V~v~~ 98 (184) T 2h0b_A 29 SDEITLSFKTLQ-RNGLMLHTG---KSADYVNLALKNG-----AVSLVINLGSGAF-EALVEPVNGKFNDNAWHDVKVTR 98 (184) T ss_dssp EEEEEEEEEESC-SCEEEEEEC---CTTEEEEEEEETT-----EEEEEEEESSCEE-EEEECCSSSCSSSSSCEEEEEEE T ss_pred ccEEEEEEEeCC-CCEEEEEec---CCCCEEEEEEECC-----EEEEEEECCCCeE-EEEEccCCCcccCCCeEEEEEEE Confidence 899999999865 456887652 4567888888654 4777776543221 111212 4578899999999999 Q ss_pred eCCeEEEEEccccceeeeccCCCcceeccCCeeEEEEecCcc-------cCcccccceeeeEEeeCc------ccccccC Q FBpp0301686 166 LSDKVSFYYDCELRNTTLVTREPIELVFDSASTLYIGQAGSI-------IGGKFEGYLEKINVYGNP------DAINVTC 232 (1039) Q Consensus 166 ~g~~VtLyVDC~~~~t~~l~r~~~~l~~~~~~~l~IGq~g~~-------~~~~F~G~LQ~L~i~~dp------~~~~~~C 232 (1039) .+..++||||+....+...+.....++ ....||||..... ....|.|-|++|+|...+ +.+...| T Consensus 99 ~~~~~~L~VD~~~~~~~~~~~~~~~l~--~~~~l~iGG~~~~~~~~~~~~~~~F~GCi~~v~i~~~~l~~~~~~~a~~~~ 176 (184) T 2h0b_A 99 NLRQVTISVDGILTTTGYTQEDYTMLG--SDDFFYVGGSPSTADLPGSPVSNNFMGCLKEVVYKNNDVRLELSRLAKQGD 176 (184) T ss_dssp ETTEEEEEETTTEEEEEECSTTCCCEE--ECSEEEESCCTTGGGSTTCSCCCBCEEEEEEEEEEESSCEECHHHHHHHCC T ss_pred eCCEEEEEECCeeeeeeeCCCCceeec--CCCCEEECCCCccccccCCcccCCCEEEeeEEEECCEEccccHHHHHhhcC Confidence 999999999999876554433222333 3467999875321 125699999999997654 3335556 Q ss_pred CC Q FBpp0301686 233 MP 234 (1039) Q Consensus 233 ~~ 234 (1039) +. T Consensus 177 ~~ 178 (184) T 2h0b_A 177 PK 178 (184) T ss_dssp TT T ss_pred Cc Confidence 43No 15>4avs_A Serum amyloid P-component; sugar binding protein, glycoprotein, disulfide bond, lectin, metal-binding; HET: NAG N7P; 1.40A {Homo sapiens} SCOP: b.29.1.5 PDB: 1lgn_A* 1gyk_A 2a3w_A* 2a3x_A* 2a3y_A* 1sac_A* 3d5o_A* 2w08_A* 3kqr_A* 4avt_A* 4avv_A* 4ayu_A* Probab=98.71 E-value=3.1e-07 Score=95.64 Aligned_cols=149 Identities=15% Similarity=0.088 Sum_probs=99.3 Q ss_pred cceEEcCCc---cccCcccccCCCCCcceEEEEEEeecCCCCceEEEEEeCCCCeEEEEEEEcccccCceEEEEEEEecc Q FBpp0301686 63 PAFRFLQTA---DVKSPYRMLLPEKLYEFAILITFRQSSLKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQAD 139 (1039) Q Consensus 63 pAy~f~~~a---~l~~pt~~~fp~~~~eFSllaT~R~~~~~~g~LfsI~~~~d~~~qlgL~lsg~~~~~~~i~L~Y~~~~ 139 (1039) .|+.|.... .+..+.. ++....+|||.++||+.......||+..+. .....|.|.+.... .+.|+. .+ T Consensus 7 ~al~F~g~~~~~yv~~~~~--~~~~~~~fTi~~Wvk~~~~~~~~i~s~~~~-~~~~~~~l~~~~~~----~~~~~~--~~ 77 (204) T 4avs_A 7 KVFVFPRESVTDHVNLITP--LEKPLQNFTLCFRAYSDLSRAYSLFSYNTQ-GRDNELLVYKERVG----EYSLYI--GR 77 (204) T ss_dssp EEEEECSCCSSCEEEECCC--CCSCBSEEEEEEEEECCCCSCEEEEEEEET-TEEEEEEEEEEETT----EEEEEE--TT T ss_pred cEEECCCCCCCCeEEEecC--CCCCccCEEEEEEEEcCCCCCcEEEEEEcC-CCCceEEEEEeCCC----eEEEEE--CC Confidence 567777442 3333321 221222999999999887677889998875 33445666554321 455554 22 Q ss_pred CCcceeEEEeeeccCCCCceEEEEEEeCC--eEEEEEccccceeeeccCCCcceeccCCeeEEEEecCcc------cCcc Q FBpp0301686 140 QNIGRKLASFGVAHVPDKWNSIALQVLSD--KVSFYYDCELRNTTLVTREPIELVFDSASTLYIGQAGSI------IGGK 211 (1039) Q Consensus 140 ~~~~q~~~sF~v~laDg~WHrlaLsV~g~--~VtLyVDC~~~~t~~l~r~~~~l~~~~~~~l~IGq~g~~------~~~~ 211 (1039) ..+.+...+.+++||||++...+. .++||||++++.+..+... ..+.....++||+.... .... T Consensus 78 -----~~~~~~~~~~~~~W~Hva~t~d~~~g~~~lYvnG~~~~~~~~~~~---~~~~~~~~l~iG~~~~~~gg~~~~~~~ 149 (204) T 4avs_A 78 -----HKVTSKVIEKFPAPVHICVSWESSSGIAEFWINGTPLVKKGLRQG---YFVEAQPKIVLGQEQDSYGGKFDRSQS 149 (204) T ss_dssp -----EEEEEECCCCSSCCEEEEEEEETTTCEEEEEETTEECCCEECCTT---CCBCSSCEEEESSCCSSSSCCCCGGGC T ss_pred -----EEEEecccccCCCEEEEEEEEECCCCeEEEEECCeEecccccCCC---ceECCCceEEEcccccccCccccCCcc Confidence 123455677899999999999976 8999999999987544321 12345678999986321 1357 Q ss_pred cccceeeeEEeeCcccc Q FBpp0301686 212 FEGYLEKINVYGNPDAI 228 (1039) Q Consensus 212 F~G~LQ~L~i~~dp~~~ 228 (1039) |.|.|.+|+|+..+..+ T Consensus 150 f~G~idevri~~~aLs~ 166 (204) T 4avs_A 150 FVGEIGDLYMWDSVLPP 166 (204) T ss_dssp CCEEEEEEEEESSCCCH T ss_pred ceEEeceeEEECccCCH Confidence 99999999999987544No 16>2r16_A Neurexin-1-alpha; beta-sandwich, cell adhesion, splicing; 1.04A {Bos taurus} Probab=98.70 E-value=2.2e-07 Score=95.59 Aligned_cols=125 Identities=16% Similarity=0.227 Sum_probs=88.8 Q ss_pred ceEEEEEEeecCCCCceEEEEEeCCCCeEEEEEEEcccccCceEEEEEEEeccCCcceeEEEeeeccCCCCceEEEEEEe Q FBpp0301686 87 EFAILITFRQSSLKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLASFGVAHVPDKWNSIALQVL 166 (1039) Q Consensus 87 eFSllaT~R~~~~~~g~LfsI~~~~d~~~qlgL~lsg~~~~~~~i~L~Y~~~~~~~~q~~~sF~v~laDg~WHrlaLsV~ 166 (1039) .|+|.++||... ..+.||.+.+. +...+|.|+|..- .|.|.|...++. ..+.....+.|++||+|.|... T Consensus 28 ~~~isl~frT~~-~~GlLl~~~~~-~~~d~l~l~L~~G-----~l~~~~~~g~~~---~~~~~~~~l~Dg~WH~V~v~~~ 97 (182) T 2r16_A 28 AEDVSLRFRSQR-AYGILMATTSR-DSADTLRLELDAG-----RVKLTVNLGKGP---ETLFAGYNLNDNEWHTVRVVRR 97 (182) T ss_dssp EEEEEEEEECSC-SSEEEEEEECS-SSCCEEEEEEETT-----EEEEEEESSSCC---EEEEECSSCCSSSCEEEEEEEE T ss_pred ccEEEEEEEeCC-CCEEEEEcCCC-CCCCEEEEEEECC-----EEEEEEEcCCcc---eEeccCCcccCCCcEEEEEEEE Confidence 799999999764 56799988874 4567888888654 477777653322 2333466888999999999999 Q ss_pred CCeEEEEEccccceeeeccCCCcceeccCCeeEEEEecCc-----ccCcccccceeeeEEeeC Q FBpp0301686 167 SDKVSFYYDCELRNTTLVTREPIELVFDSASTLYIGQAGS-----IIGGKFEGYLEKINVYGN 224 (1039) Q Consensus 167 g~~VtLyVDC~~~~t~~l~r~~~~l~~~~~~~l~IGq~g~-----~~~~~F~G~LQ~L~i~~d 224 (1039) +..++|+||+....+...+.....|+++ .||+|-... .....|+|-|++|+|... T Consensus 98 ~~~~~L~VD~~~~~~~~~~~~~~~l~~~---~l~~Gg~~~~~~~~~~~~~F~GCi~~v~in~~ 157 (182) T 2r16_A 98 GKSLKLTVDDQQAMTGQMAGDHTRLEFH---NIETGIITERRYLSSVPSNFIGHLQSLTFNGM 157 (182) T ss_dssp TTEEEEEETTCCEEEEECCSSCCCEEEE---EEEESSCCCCTTCSSCCCCCEEEEEEEEETTE T ss_pred CCEEEEEEeCCceeeEEcCCCCcEEEec---ceEEcCcccccccCCCCCCCEEEEeEEEECCE Confidence 9999999999987655444433345442 288875421 123569999999998543No 17>3pvn_A C-reactive protein; pentraxin family, immune system; 1.98A {Homo sapiens} SCOP: b.29.1.5 PDB: 1gnh_A 1lj7_A 3l2y_A 1b09_A 3pvo_A Probab=98.67 E-value=4.6e-07 Score=94.36 Aligned_cols=149 Identities=17% Similarity=0.174 Sum_probs=98.9 Q ss_pred cceEEcCC---ccccCcccccCCCCCcceEEEEEEeecCC--CCceEEEEEeCCCCeEEEEEEEcccccCceEEEEEEEe Q FBpp0301686 63 PAFRFLQT---ADVKSPYRMLLPEKLYEFAILITFRQSSL--KGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQ 137 (1039) Q Consensus 63 pAy~f~~~---a~l~~pt~~~fp~~~~eFSllaT~R~~~~--~~g~LfsI~~~~d~~~qlgL~lsg~~~~~~~i~L~Y~~ 137 (1039) .|+.|... ..+..+... +....+|||.++||+... ....||+..+. .....|.|.++... .+.|+. T Consensus 7 ~al~F~g~s~~~yv~~~~~~--~~~~~~fTi~~Wvk~~~~~~~~~~i~s~~~~-~~~~~~~l~~~~~~----~~~~~~-- 77 (206) T 3pvn_A 7 KAFVFPKESDTSYVSLKAPL--TKPLKAFTVCLHFYTELSSTRGYSIFSYATK-RQDNEILIFWSKDI----GYSFTV-- 77 (206) T ss_dssp EEEEECSCCSSCEEEECCCC--CSCBSEEEEEEEEEESGGGTCCEEEEEEEET-TEEEEEEEEEETTT----EEEEEE-- T ss_pred CEEECCCCCccCeEEEcCCC--CCChhcEEEEEEEEeCCCCCCCcEEEEEECC-CCCCEEEEEEeCCC----EEEEEE-- Confidence 56777754 233333221 111229999999999754 67789998875 34445666554331 455544 Q ss_pred ccCCcceeEEEeeeccCCCCceEEEEEEeCC--eEEEEEccccceeeeccCCCcceeccCCeeEEEEecCc------ccC Q FBpp0301686 138 ADQNIGRKLASFGVAHVPDKWNSIALQVLSD--KVSFYYDCELRNTTLVTREPIELVFDSASTLYIGQAGS------IIG 209 (1039) Q Consensus 138 ~~~~~~q~~~sF~v~laDg~WHrlaLsV~g~--~VtLyVDC~~~~t~~l~r~~~~l~~~~~~~l~IGq~g~------~~~ 209 (1039) .+ ....+...+.+++||||++...+. .++||||.+++.+..+... ..+.....|+||+... ... T Consensus 78 ~~-----~~~~~~~~~~~~~W~hva~t~d~~~g~~~lYvnG~~~~~~~~~~~---~~~~~~~~l~iG~~~~~~gg~~~~~ 149 (206) T 3pvn_A 78 GG-----SEILFEVPEVTVAPVHICTSWESASGIVEFWVDGKPRVRKSLKKG---YTVGAEASIILGQEQDSFGGNFEGS 149 (206) T ss_dssp TT-----EEEEEECSSCCSSCEEEEEEEETTTCEEEEEETTEECCCEECCTT---CCBCSSCEEEESSCCSBTTBCCCGG T ss_pred CC-----eeeEeecccCCCCcEEEEEEEECCCceEEEEECCcCcccccccCC---ceECCCCEEEEeeccccCCCCcccc Confidence 22 123445677899999999999975 8999999999987544322 1134567899998632 123 Q ss_pred cccccceeeeEEeeCcccc Q FBpp0301686 210 GKFEGYLEKINVYGNPDAI 228 (1039) Q Consensus 210 ~~F~G~LQ~L~i~~dp~~~ 228 (1039) ..|.|.|.+|+|+...... T Consensus 150 ~~f~G~idevri~~~aLs~ 168 (206) T 3pvn_A 150 QSLVGDIGNVNMWDFVLSP 168 (206) T ss_dssp GCCCEEEEEEEEESSCCCH T ss_pred cceEEEecceEEEcccCCH Confidence 5799999999999887444No 18>3bod_A Neurexin-1-alpha; neurexin1D, LNS6, alternative splicing, calcium, cell adhesion, EGF-like domain, glycoprotein, membrane, metal- binding; 1.70A {Mus musculus} SCOP: b.29.1.4 PDB: 3vkf_C* 2xb6_C* 2wqz_C* 1c4r_A 3bop_A 3mw4_A* Probab=98.60 E-value=7.5e-07 Score=91.51 Aligned_cols=125 Identities=16% Similarity=0.162 Sum_probs=87.8 Q ss_pred ceEEEEEEeecCCCCceEEEEEeCCCCeEEEEEEEcccccCceEEEEEEEeccCCcceeEE-EeeeccCCCCceEEEEEE Q FBpp0301686 87 EFAILITFRQSSLKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLA-SFGVAHVPDKWNSIALQV 165 (1039) Q Consensus 87 eFSllaT~R~~~~~~g~LfsI~~~~d~~~qlgL~lsg~~~~~~~i~L~Y~~~~~~~~q~~~-sF~v~laDg~WHrlaLsV 165 (1039) .++|.+.||... ..+.||.+.+..+...+|.|+|..- .+.|.|....+. ..+ .....+.|++||+|.|.. T Consensus 30 ~~~isl~frT~~-~~GlLl~~~~~~~~~d~l~l~L~~G-----~l~~~~~~g~~~---~~~~~~~~~l~Dg~WH~V~v~r 100 (178) T 3bod_A 30 ADRLAIGFSTVQ-KEAVLVRVDSSSGLGDYLELHIHQG-----KIGVKFNVGTDD---IAIEESNAIINDGKYHVVRFTR 100 (178) T ss_dssp EEEEEEEEECCC-SSEEEEEEEESSSSCCEEEEEEETT-----EEEEEEESSSCC---EEEECCSSCCCSSSCEEEEEEE T ss_pred CCEEEEEEEECC-CCEEEEEEcCCCCCCCEEEEEEECC-----EEEEEEEcCCCc---EEEecCCcccCCCCcEEEEEEE Confidence 788889999764 4678888877423466888888653 577888654332 222 236678899999999999 Q ss_pred eCCeEEEEEccccceee-eccCCCcceeccCCeeEEEEecCcccCcccccceeeeEEeeC Q FBpp0301686 166 LSDKVSFYYDCELRNTT-LVTREPIELVFDSASTLYIGQAGSIIGGKFEGYLEKINVYGN 224 (1039) Q Consensus 166 ~g~~VtLyVDC~~~~t~-~l~r~~~~l~~~~~~~l~IGq~g~~~~~~F~G~LQ~L~i~~d 224 (1039) .+..++|+|||....+. ..+..... ++....||||... ....|+|-|++|+|--- T Consensus 101 ~~~~~~L~VD~~~~~~~~~~~~~~~~--l~~~~~l~iGG~~--~~~~F~GCi~~v~in~~ 156 (178) T 3bod_A 101 SGGNATLQVDSWPVIERYPAGRQLTI--FNSQATIIIGGKE--QGQPFQGQLSGLYYNGL 156 (178) T ss_dssp ETTEEEEEETTSCCEEECCCSCCCCC--BCCEEEEEESCCT--TSCBCCEEEEEEEETTE T ss_pred eCCEEEEEECCceeeeEecCCCcceE--ecCCCCEEEeCcc--CCCCCeEEEceEEECCe Confidence 99999999999875332 33322222 3345689999752 33679999999998543No 19>4c1w_A Neuraminidase; sugar binding protein, carbohydrate-binding module, sialic A binding; HET: SLT; 1.84A {Streptococcus pneumoniae} PDB: 4c1x_A* Probab=98.48 E-value=1.4e-06 Score=89.79 Aligned_cols=136 Identities=16% Similarity=0.155 Sum_probs=88.3 Q ss_pred ceEEEEEEeecC--CCCceEEEEEeCCCCeEEEEEEEcccccCceEEEEEEEeccCCccee-EEEeeeccCCCCceEEEE Q FBpp0301686 87 EFAILITFRQSS--LKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRK-LASFGVAHVPDKWNSIAL 163 (1039) Q Consensus 87 eFSllaT~R~~~--~~~g~LfsI~~~~d~~~qlgL~lsg~~~~~~~i~L~Y~~~~~~~~q~-~~sF~v~laDg~WHrlaL 163 (1039) +|||.++||+.. .....||++.+......+|.|.+.... ..|.+....+..... .+.-...+.+++||||++ T Consensus 34 ~fTv~~Wvk~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~-----~~~~~~~~~g~~~~~~~~~~~~~~~~g~W~Hva~ 108 (188) T 4c1w_A 34 NATVHMEFKPDAKAPAFYNLFSVSSATKKDEYFTMAVYNNT-----ATLEGRGSDGKQFYNNYNDAPLKVKPGQWNSVTF 108 (188) T ss_dssp SEEEEEEEEECSSCCSEEEEEEEECSSCTTCEEEEEEETTE-----EEEEEECTTCCBSSCCCTTCSCBCCTTSCEEEEE T ss_pred CeEEEEEEECCCCCCCccEEEEccCCcccCceEEEEEeCCc-----cEEEEEECCCCeEeccccccccccCCCCEEEEEE Confidence 999999999976 455679998876433457777776542 244444332221000 011134566899999999 Q ss_pred EEeC-------CeEEEEEccccceeeeccCCCcceeccCCeeEEEEecCcc--cCcccccceeeeEEeeCcccc Q FBpp0301686 164 QVLS-------DKVSFYYDCELRNTTLVTREPIELVFDSASTLYIGQAGSI--IGGKFEGYLEKINVYGNPDAI 228 (1039) Q Consensus 164 sV~g-------~~VtLyVDC~~~~t~~l~r~~~~l~~~~~~~l~IGq~g~~--~~~~F~G~LQ~L~i~~dp~~~ 228 (1039) ...+ ..++||||.+++.+......+. ..+.....++||+.... ....|.|.|.+|+|+...... T Consensus 109 t~d~~~~~~~~~~~~lYvnG~~~~~~~~~~~~~-~~~~~~~~~~iG~~~~~g~~~~~f~G~idevriy~~aLs~ 181 (188) T 4c1w_A 109 TVEKPTAELPKGRVRLYVNGVLSRTSLRSGNFI-KDMPDVTHVQIGATKRANNTVWGSNLQIRNLTVYNRALTP 181 (188) T ss_dssp EEECCCSSSTTCEEEEEETTEEEEEECSCCCCG-GGCTTCCEEEEESEEETTEEECCCCEEEEEEEEESSCCCH T ss_pred EEeCCcccCCCceEEEEECCEEeeeeeccCCcc-ccCCCCccEEECccccCCCcccccccEEeeEEEECCcCCH Confidence 9999 8999999999988742211111 11234568999986221 123599999999999876543No 20>2v73_A CBM40, putative EXO-alpha-sialidase; carbohydrate-binding module, bacterial pathogen, sialic acid, sugar-binding protein; HET: SIA; 2.2A {Clostridium perfringens} Probab=98.48 E-value=3.6e-06 Score=87.81 Aligned_cols=135 Identities=16% Similarity=0.131 Sum_probs=89.4 Q ss_pred ceEEEEEEeecCCCCceEEEEEeCCCCeEEEEEEEcccccCceEEEEEEEeccCCccee-EEEeeeccCCCCceEEEEEE Q FBpp0301686 87 EFAILITFRQSSLKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRK-LASFGVAHVPDKWNSIALQV 165 (1039) Q Consensus 87 eFSllaT~R~~~~~~g~LfsI~~~~d~~~qlgL~lsg~~~~~~~i~L~Y~~~~~~~~q~-~~sF~v~laDg~WHrlaLsV 165 (1039) +|||.++||+.......||++.+......+|.|.+... ++.|............ .....+.+.+ +||||++.. T Consensus 41 ~fTvs~Wvk~~~~~~~~lfs~~~~~~~~~~~~l~~~~g-----~l~~~~~~~~~~~~~~~~~~~~~~~~~-~W~Hva~t~ 114 (191) T 2v73_A 41 EGTIVTRFNMNDTSIQSLIGLSDGNKANNYFSLYVSGG-----KVGYELRRQEGNGDFNVHHSADVTFNR-GINTLALKI 114 (191) T ss_dssp SEEEEEEEEECCCSCEEEEEEECTTCSSCEEEEEECSS-----EEEEEEEECTTSSCEEEEEEEECCCCS-SCEEEEEEE T ss_pred CEEEEEEEEeCCCCceEEEEecCCCCcCcEEEEEEECC-----EEEEEEEecCCCcceeeecccccccCC-ceEEEEEEE Confidence 99999999998755567999987644455677777622 4666665543321111 1112333345 999999999 Q ss_pred eC-CeEEEEEccccceeeeccCCCcceeccCCeeEEEEecCcc---cCcccccceeeeEEeeCcccc Q FBpp0301686 166 LS-DKVSFYYDCELRNTTLVTREPIELVFDSASTLYIGQAGSI---IGGKFEGYLEKINVYGNPDAI 228 (1039) Q Consensus 166 ~g-~~VtLyVDC~~~~t~~l~r~~~~l~~~~~~~l~IGq~g~~---~~~~F~G~LQ~L~i~~dp~~~ 228 (1039) .+ ..++||||-+++.+.........-.+ ....++||+.... ....|.|.|.+|+|+.....+ T Consensus 115 d~~~~~~lYvnG~~~~~~~~~~~~~~~~~-~~~~~~iG~~~~~~g~~~~~f~G~Idevri~~~aLs~ 180 (191) T 2v73_A 115 EKGIGAKIFLNGSLVKTVSDPNIKFLNAI-NLNSGFIGKTDRANGYNEYLFRGNIDFMNIYDKPVSD 180 (191) T ss_dssp ETTTEEEEEETTEEEEEEECTTCCCGGGS-CCCEEEESSCCCCSSSCCCCCCEEEEEEEEESSCCCH T ss_pred eCCCcEEEEECCEEeeeeccCCccccccc-CCceEEECCCCCCCCccCcCCceEEeEEEEECCcCCH Confidence 98 78999999999887654321000011 3457999986331 134699999999999776544No 21>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus} Probab=98.39 E-value=3e-06 Score=98.23 Aligned_cols=127 Identities=15% Similarity=0.149 Sum_probs=88.4 Q ss_pred ceEEEEEEeecCCCCceEEEEEeCCCCeEEEEEEEcccccCceEEEEEEEeccCCcceeEEEe-eeccCCCCceEEEEEE Q FBpp0301686 87 EFAILITFRQSSLKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLASF-GVAHVPDKWNSIALQV 165 (1039) Q Consensus 87 eFSllaT~R~~~~~~g~LfsI~~~~d~~~qlgL~lsg~~~~~~~i~L~Y~~~~~~~~q~~~sF-~v~laDg~WHrlaLsV 165 (1039) .+.|.+.||.. ...++||.+.+......+|.|.|..- .|.|.|....+. ..+.+ ...+.||+||+|.|.+ T Consensus 250 ~~~isl~frT~-~~~GlLl~~~~~~~~~~~l~l~l~~G-----~l~~~~~~g~~~---~~~~~~~~~l~DG~WH~V~v~~ 320 (410) T 3asi_A 250 ADRLAIGFSTV-QKEAVLVRVDSSSGLGDYLELHIHQG-----KIGVKFNVGTDD---IAIEESNAIINDGKYHVVRFTR 320 (410) T ss_dssp EEEEEEEEECC-CSEEEEEEEEECTTCCCEEEEEEETT-----EEEEEEESSSSC---EEEECCSCCCCSSSCEEEEEEE T ss_pred ccEEEEEEEec-CCCeEEEEEecCCCCCcEEEEEEeCC-----EEEEEEECCCCC---eEEccCCcCCCCCCeEEEEEEE Confidence 46777778754 45679998877543467888888743 477777543322 23333 5678899999999999 Q ss_pred eCCeEEEEEccccceeeeccCCCcceeccCCeeEEEEecCcccCcccccceeeeEEeeCc Q FBpp0301686 166 LSDKVSFYYDCELRNTTLVTREPIELVFDSASTLYIGQAGSIIGGKFEGYLEKINVYGNP 225 (1039) Q Consensus 166 ~g~~VtLyVDC~~~~t~~l~r~~~~l~~~~~~~l~IGq~g~~~~~~F~G~LQ~L~i~~dp 225 (1039) .+..++|+|||..+.+....... ...++....||||... ....|+|-|++|+|-..+ T Consensus 321 ~~~~~~L~VD~~~~~~~~~~~~~-~~~l~~~~~l~lGg~~--~~~~F~Gci~~v~in~~~ 377 (410) T 3asi_A 321 SGGNATLQVDSWPVIERYPAGRQ-LTIFNSQATIIIGGKE--QGQPFQGQLSGLYYNGLK 377 (410) T ss_dssp ETTEEEEEETTSCCEEECCSSCC-CCCBCCEEEEEESSTT--TTCCCCEEEEEEEETTBC T ss_pred ECCEEEEEECCccceeecCCCcc-cEEecCCceEEEcCCc--CCCCCEEEEEEEEECCHH Confidence 99999999999887654222111 1123456789999752 346899999999995543No 22>1d2s_A SHBG, sex hormone-binding globulin; steroid transport, laminin G-like domain, jellyroll, androgen binding protein (ABP); HET: DHT; 1.55A {Homo sapiens} SCOP: b.29.1.4 PDB: 1kdk_A* 1kdm_A* Probab=98.37 E-value=4.9e-06 Score=84.82 Aligned_cols=123 Identities=11% Similarity=0.013 Sum_probs=84.8 Q ss_pred ceEEEEEEeecCCCCceEEEEEeCCCCeEEEEEEEcccccCceEEEEEEEeccCCcceeEEEeeeccCCCCceEEEEEEe Q FBpp0301686 87 EFAILITFRQSSLKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLASFGVAHVPDKWNSIALQVL 166 (1039) Q Consensus 87 eFSllaT~R~~~~~~g~LfsI~~~~d~~~qlgL~lsg~~~~~~~i~L~Y~~~~~~~~q~~~sF~v~laDg~WHrlaLsV~ 166 (1039) +|+|.+.||... ..+.||...+. +...+|.|+|..- .|.|.|....+ ...+.....+.|++||+|.|... T Consensus 27 ~~~isl~frT~~-~~GlLl~~~~~-~~~d~l~l~L~~G-----~l~~~~~~g~~---~~~~~~~~~v~DG~WH~V~v~~~ 96 (170) T 1d2s_A 27 KTSSSFEVRTWD-PEGVIFYGDTN-PKDDWFMLGLRDG-----RPEIQLHNHWA---QLTVGAGPRLDDGRWHQVEVKME 96 (170) T ss_dssp CCEEEEEEEESC-SSEEEEEEEEE-TTTEEEEEEEETT-----EEEEEEESSSC---EEEEECSCCCCSSSCEEEEEEEE T ss_pred CcEEEEEEEECC-CCEEEEEeCCC-CCCCEEEEEEECC-----EEEEEEECCCc---cEEeeCCCccCCCCCEEEEEEEe Confidence 788889999874 45788887764 4467888888654 47777754332 12223356788999999999999 Q ss_pred CCeEEEEEccccceeeeccCCCcceeccCCeeEEEEecCc-------ccCcccccceee-eEEeeCc Q FBpp0301686 167 SDKVSFYYDCELRNTTLVTREPIELVFDSASTLYIGQAGS-------IIGGKFEGYLEK-INVYGNP 225 (1039) Q Consensus 167 g~~VtLyVDC~~~~t~~l~r~~~~l~~~~~~~l~IGq~g~-------~~~~~F~G~LQ~-L~i~~dp 225 (1039) +..++|+||.....+.... +. . ....||||.... .....|+|=|++ ++|-..+ T Consensus 97 ~~~~~L~VD~~~~~~~~~~--~g-~---~~~~lylGG~p~~~~~~~~~~~~~F~GCi~~~~~in~~~ 157 (170) T 1d2s_A 97 GDSVLLEVDGEEVLRLRQV--SG-H---PIMRIALGGLLFPASNLRLPLVPALDGCLRRDSWLDKQA 157 (170) T ss_dssp TTEEEEEETTEEEEEETTC--CC-C---CEEEEEESSCSSCGGGSSSCCCCCCCEEEEEEEESCGGG T ss_pred CCEEEEEECCeeeeeeccC--CC-C---cCCCEEECCccccccccccCCCCCeeEecccceecCCee Confidence 9999999999876543211 11 1 246799987521 123569999999 7765443No 23>1f5f_A SHBG, sex hormone-binding globulin; jellyroll, signaling protein; HET: DHT; 1.70A {Homo sapiens} SCOP: b.29.1.4 PDB: 1lhw_A* 1lho_A* 1lhn_A* 1lhv_A* 1lhu_A* Probab=98.26 E-value=1.3e-05 Score=84.18 Aligned_cols=128 Identities=11% Similarity=0.023 Sum_probs=85.4 Q ss_pred ceEEEEEEeecCCCCceEEEEEeCCCCeEEEEEEEcccccCceEEEEEEEeccCCcceeEEEeeeccCCCCceEEEEEEe Q FBpp0301686 87 EFAILITFRQSSLKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLASFGVAHVPDKWNSIALQVL 166 (1039) Q Consensus 87 eFSllaT~R~~~~~~g~LfsI~~~~d~~~qlgL~lsg~~~~~~~i~L~Y~~~~~~~~q~~~sF~v~laDg~WHrlaLsV~ 166 (1039) +|+|.+.||... ..+.||...+. +...+|.|+|..- .|.|.|..... ...+.-...+.|++||+|.|... T Consensus 39 ~~~is~~frT~~-~~GlLl~~~~~-~~~d~l~L~L~~G-----~l~~~~~~g~~---~~~~~s~~~vnDG~WH~V~l~~~ 108 (205) T 1f5f_A 39 KTSSSFEVRTWD-PEGVIFYGDTN-PKDDWFMLGLRDG-----RPEIQLHNHWA---QLTVGAGPRLDDGRWHQVEVKME 108 (205) T ss_dssp CCEEEEEEEESC-SSEEEEEEEEE-TTTEEEEEEEETT-----EEEEEEESSSC---EEEEECSCCCCSSSCEEEEEEEE T ss_pred CcEEEEEEEECC-CCEEEEEeCCC-CCCCEEEEEEeCC-----EEEEEEECCCc---eEEEecCCccCCCCCEEEEEEEe Confidence 889999999775 45788887764 4467888888654 47777764321 12222356788999999999999 Q ss_pred CCeEEEEEccccceee-eccCCCcceeccCCeeEEEEecCc-------ccCcccccceee-eEEeeCc Q FBpp0301686 167 SDKVSFYYDCELRNTT-LVTREPIELVFDSASTLYIGQAGS-------IIGGKFEGYLEK-INVYGNP 225 (1039) Q Consensus 167 g~~VtLyVDC~~~~t~-~l~r~~~~l~~~~~~~l~IGq~g~-------~~~~~F~G~LQ~-L~i~~dp 225 (1039) +..++|+||.....+. ......... ......||||-... .....|+|=|++ |+|--.+ T Consensus 109 ~~~~~L~VD~~~~~~~~~~~~~~~~~-~~~~~~lyvGG~p~~~~~~~~~~~~~F~GCi~~~v~in~~~ 175 (205) T 1f5f_A 109 GDSVLLEVDGEEVLRLRQVSGPLTSK-RHPIMRIALGGLLFPASNLRLPLVPALDGCLRRDSWLDKQA 175 (205) T ss_dssp TTEEEEEETTEEEEEECSCCCCC-----CCEEEEEESSCSSCGGGSSSCCCCCCCEEEEEEECSCGGG T ss_pred CCEEEEEECCccceeeecccCccccC-CCcCccEEECCccCcccccccCCCCCccEEecccEEECCeE Confidence 9999999999876542 121111111 12246899987521 113469999999 7776554No 24>2r1d_A Neurexin-1-beta, neurexin I-beta; beta-sandwich, cell adhesion, splicing; 2.60A {Rattus norvegicus} SCOP: b.29.1.4 PDB: 3biw_E* Probab=98.23 E-value=1.4e-05 Score=85.70 Aligned_cols=125 Identities=16% Similarity=0.158 Sum_probs=86.8 Q ss_pred ceEEEEEEeecCCCCceEEEEEeCCCCeEEEEEEEcccccCceEEEEEEEeccCCcceeEEE-eeeccCCCCceEEEEEE Q FBpp0301686 87 EFAILITFRQSSLKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLAS-FGVAHVPDKWNSIALQV 165 (1039) Q Consensus 87 eFSllaT~R~~~~~~g~LfsI~~~~d~~~qlgL~lsg~~~~~~~i~L~Y~~~~~~~~q~~~s-F~v~laDg~WHrlaLsV 165 (1039) .+.|.+.||... ..+.||.+.+......+|.|+|..- .|.|.|....+. ..+. ....+.|++||+|.|.. T Consensus 64 ~~~isl~FrT~~-~~GlLl~~~~~~~~~dfl~L~L~~G-----~l~~~~~~G~~~---~~l~~~~~~l~DG~WH~V~v~r 134 (226) T 2r1d_A 64 ADRLAIGFSTVQ-KEAVLVRVDSSSGLGDYLELHIHQG-----KIGVKFNVGTDD---IAIEESNAIINDGKYHVVRFTR 134 (226) T ss_dssp EEEEEEEEECCC-SSEEEEEEEECTTCCCEEEEEEETT-----EEEEEEESSSCE---EEEECCSSCCCSSSCEEEEEEE T ss_pred cCEEEEEEEECC-CCeEEEEecCCCCCCCEEEEEEECC-----EEEEEEECCCCe---EEEecCCcCccCCCcEEEEEEE Confidence 688888888754 5678888877423467888888553 577888654332 2222 25678899999999999 Q ss_pred eCCeEEEEEcccccee-eeccCCCcceeccCCeeEEEEecCcccCcccccceeeeEEeeC Q FBpp0301686 166 LSDKVSFYYDCELRNT-TLVTREPIELVFDSASTLYIGQAGSIIGGKFEGYLEKINVYGN 224 (1039) Q Consensus 166 ~g~~VtLyVDC~~~~t-~~l~r~~~~l~~~~~~~l~IGq~g~~~~~~F~G~LQ~L~i~~d 224 (1039) .+..++|+||.....+ ...+..... ++....||||-.. ....|+|-|++|+|--. T Consensus 135 ~~~~~~L~VD~~~~~~~~~~~~~~~~--l~~~~~l~lGG~p--~~~~F~GCi~~v~in~~ 190 (226) T 2r1d_A 135 SGGNATLQVDSWPVIERYPAGRQLTI--FNSQATIIIGGKE--QGQPFQGQLSGLYYNGL 190 (226) T ss_dssp ETTEEEEEETTSCCEEECCSSCCCCC--BCSEEEEEESSTT--TTCCCCEEEEEEEETTB T ss_pred cCCEEEEEECCeeeeeEecCCCcceE--EcCCCCEEEeccc--CCCCCEEEEeeEEECCE Confidence 9999999999987433 233322222 3345689998752 33679999999998543No 25>2jd4_A Laminin subunit alpha-1; basement membrane protein, metal binding protein; 1.9A {Mus musculus} SCOP: b.29.1.0 Probab=98.23 E-value=1.2e-05 Score=92.18 Aligned_cols=125 Identities=15% Similarity=0.291 Sum_probs=84.9 Q ss_pred ceEEEEEEeecCCCCceEEEEEeCCCCeEEEEEEEcccccCceEEEEEEEeccCCcceeEEEe----eeccCCCCceEEE Q FBpp0301686 87 EFAILITFRQSSLKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLASF----GVAHVPDKWNSIA 162 (1039) Q Consensus 87 eFSllaT~R~~~~~~g~LfsI~~~~d~~~qlgL~lsg~~~~~~~i~L~Y~~~~~~~~q~~~sF----~v~laDg~WHrla 162 (1039) +|+|.+.||.. ...+.||.+.+. ...+|.|.|..- .|.|.|....+. ..+.+ ...+.||+||+|. T Consensus 221 ~~~isl~frT~-~~~GlLl~~~~~--~~d~l~l~L~~G-----~l~~~~~~g~g~---~~~~~~~~~~~~l~DG~WH~V~ 289 (383) T 2jd4_A 221 DLQITLEFRTT-SKNGVLLGISSA--KVDAIGLEIVDG-----KVLFHVNNGAGR---ITATYQPRAARALCDGKWHTLQ 289 (383) T ss_dssp CEEEEEEEEES-CSCEEEEEEECS--SSCEEEEEEETT-----EEEEEEESSSCE---EEEEECCSSTTGGGSSSCEEEE T ss_pred ceEEEEEEEeC-CCCEEEEEecCC--CCCEEEEEEECC-----EEEEEEECCCCc---EEEEEecCCCccccCCCcEEEE Confidence 88999999976 456799987763 356788887653 477777543222 22333 3577899999999 Q ss_pred EEEeCCeEEEEEccccceeeeccCCCcceeccCCeeEEEEecCc-------ccCcccccceeeeEEeeC Q FBpp0301686 163 LQVLSDKVSFYYDCELRNTTLVTREPIELVFDSASTLYIGQAGS-------IIGGKFEGYLEKINVYGN 224 (1039) Q Consensus 163 LsV~g~~VtLyVDC~~~~t~~l~r~~~~l~~~~~~~l~IGq~g~-------~~~~~F~G~LQ~L~i~~d 224 (1039) |...+..++|+||+....+....... ..++....||||.... .....|+|-|++|+|.-. T Consensus 290 v~~~~~~~~L~VD~~~~~~~~~~~~~--~~l~~~~~l~iGG~p~~~~~~~~~~~~~F~GCi~~v~in~~ 356 (383) T 2jd4_A 290 AHKSKHRIVLTVDGNSVRAESPHTHS--TSADTNDPIYVGGYPAHIKQNSLSSRASFRGCVRNLRLSRG 356 (383) T ss_dssp EEEETTEEEEEETTEEEEEC----CC--CCBCCCEEEEESCCCTTSCCTTCSCCCBCEEEEEEEEEC-- T ss_pred EEEeCCEEEEEECCeeeccccCCccc--ccccCCCCEEEcCccCcccccccccCCCCceEeeeEEECCC Confidence 99999999999999887654221111 1234467899997421 123579999999999654No 26>4qvs_A S-layer domain-containing protein; human microbiome, midwest center for structural genomics, MC biology; 2.10A {Ruminiclostridium thermocellum atcc 27ORGANISM_TAXID} Probab=98.18 E-value=3.1e-06 Score=88.99 Aligned_cols=164 Identities=15% Similarity=0.209 Sum_probs=97.7 Q ss_pred EEEccCCCCCcceEEcCC-ccccCcccccCCCCCcceEEEEEEeecCCCC---ceEEEEEeCCCCeEEEEEEEcccccCc Q FBpp0301686 53 IEFGEAEDGFPAFRFLQT-ADVKSPYRMLLPEKLYEFAILITFRQSSLKG---GYLFSVVNPLDTVVQLGVHLSPVVKNS 128 (1039) Q Consensus 53 V~~v~G~d~~pAy~f~~~-a~l~~pt~~~fp~~~~eFSllaT~R~~~~~~---g~LfsI~~~~d~~~qlgL~lsg~~~~~ 128 (1039) ++++.|..+ .|+.|... ..+..+.. ++ ....+|+|.++||+..... ..||+.-+ ...++-|..... + T Consensus 38 ~~~~~g~~g-~al~f~G~~~~v~~~~~-~~-~~~~~fTi~~Wvk~~~~~~~~~~~i~~~~~---~~~~~~l~~~~~--g- 108 (227) T 4qvs_A 38 NGVVPGLNG-NSVSLDGVDDYVALPDG-IA-GTFYNFTIAFWVRLDTIGEQPIFDFFDSGS---NNKYMRLTAESD--G- 108 (227) T ss_dssp SCEEECSSS-EEECCCSSSCEEECCTT-SS-TTCSSCCCCCCCCCSSCSSEEEEEEECTTC---SSCEEEEEECTT--S- T ss_pred ceeccCCCC-cEEEecCcCCEEEcCcc-cc-cCCCCeEEEEEEEeCCCCCCcceeeEecCC---CCcEEEEEEcCC--C- Confidence 455555443 68888754 34555532 11 1112999999999977664 34554322 233444443332 1 Q ss_pred eEEEEEEEeccCCcceeEEEeeeccCCCCceEEEEEEeCCeEEEEEccccceeeecc-CCCcceeccCCeeEEEEecCcc Q FBpp0301686 129 YNVSLVYTQADQNIGRKLASFGVAHVPDKWNSIALQVLSDKVSFYYDCELRNTTLVT-REPIELVFDSASTLYIGQAGSI 207 (1039) Q Consensus 129 ~~i~L~Y~~~~~~~~q~~~sF~v~laDg~WHrlaLsV~g~~VtLyVDC~~~~t~~l~-r~~~~l~~~~~~~l~IGq~g~~ 207 (1039) ++.|.+...+... ...+.-...+.+++||||++...+..++||||.+++.+.... ..+..+ +.....++||..... T Consensus 109 -~l~~~~~~~~~~~-~~~~~~~~~~~~~~W~hva~t~d~~~~~lYvnG~~~~~~~~~~~~~~~~-~~~~~~~~iG~~~~~ 185 (227) T 4qvs_A 109 -KIKFAMTQSGYYG-EKTITSGSALTEGVWKHVAVTLSGDTGTLYINGENVGENNTLSLRPLTF-LGETSKGYIGKSHQT 185 (227) T ss_dssp -CEEEEEESSCGGG-CEEEECCCCCCTTCCCCEEEEEETTEEEEEETTEEEEEETTCCC-CCSS-SGGGCCCCSSCCCCC T ss_pred -cEEEEEeCCCCCc-ceEEecCCcccCCcEEEEEEEEeCCeEEEEECCEEeeeccCCCCCcccc-cCCCcceeecCCcCC Confidence 3556554332211 122222456678999999999999999999999998876432 112222 122356788876331 Q ss_pred c-------CcccccceeeeEEeeCcccc Q FBpp0301686 208 I-------GGKFEGYLEKINVYGNPDAI 228 (1039) Q Consensus 208 ~-------~~~F~G~LQ~L~i~~dp~~~ 228 (1039) . ...|.|.|.+|+|+...... T Consensus 186 ~~~~~~~~~~~f~G~idevri~~~aLs~ 213 (227) T 4qvs_A 186 DSSEDPYYNSYLHGMIDDFRIFDRALSA 213 (227) T ss_dssp SCTTCSSTTCCCCSCCCCCCCCSSCCCH T ss_pred CccCCcccccccCcEeeEEEEEcccCCH Confidence 1 23799999999999876543No 27>1dyk_A Laminin alpha 2 chain; metal binding protein; 2.0A {Mus musculus} SCOP: b.29.1.4 b.29.1.4 PDB: 1okq_A 1qu0_A Probab=98.11 E-value=2.6e-05 Score=89.76 Aligned_cols=126 Identities=10% Similarity=0.233 Sum_probs=86.3 Q ss_pred ceEEEEEEeecCCCCceEEEEEeCCCCeEEEEEEEcccccCceEEEEEEEeccCCcceeEEEe----eeccCCCCceEEE Q FBpp0301686 87 EFAILITFRQSSLKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLASF----GVAHVPDKWNSIA 162 (1039) Q Consensus 87 eFSllaT~R~~~~~~g~LfsI~~~~d~~~qlgL~lsg~~~~~~~i~L~Y~~~~~~~~q~~~sF----~v~laDg~WHrla 162 (1039) +|+|.+.||.... .++||.+.+. ...+|.|.|..- .|.|.|....+. ..+.+ ...+.||+||+|. T Consensus 233 ~~~is~~frT~~~-~GlLl~~~~~--~~~~l~l~L~~G-----~l~~~~~~g~g~---~~~~~~~~~~~~l~DG~WH~V~ 301 (394) T 1dyk_A 233 DLLVEFEFRTTRP-TGVLLGVSSQ--KMDGMGIEMIDE-----KLMFHVDNGAGR---FTAIYDAEIPGHMCNGQWHKVT 301 (394) T ss_dssp EEEEEEEEEESCS-CEEEEEEECS--SSCEEEEEEETT-----EEEEEEESSSCC---EEEEECCCSTTSTTSSSCEEEE T ss_pred ceEEEEEEEeCCC-CcEEEEeccC--CCCEEEEEEECC-----EEEEEEECCCCc---eEEEEecCCCCcCcCCCcEEEE Confidence 8899999997544 5688887763 356778877643 477777543322 22333 3577899999999 Q ss_pred EEEeCCeEEEEEccccceeeeccCCCcceeccCCeeEEEEecCcc-------cCcccccceeeeEEeeCc Q FBpp0301686 163 LQVLSDKVSFYYDCELRNTTLVTREPIELVFDSASTLYIGQAGSI-------IGGKFEGYLEKINVYGNP 225 (1039) Q Consensus 163 LsV~g~~VtLyVDC~~~~t~~l~r~~~~l~~~~~~~l~IGq~g~~-------~~~~F~G~LQ~L~i~~dp 225 (1039) |...+..++|+||+........... ...++....||||..... ....|+|-|++|+|.-.+ T Consensus 302 v~~~~~~~~L~VD~~~~~~~~~~~~--~~~~~~~~~l~iGG~p~~~~~~~~~~~~~F~GCi~~v~in~~~ 369 (394) T 1dyk_A 302 AKKIKNRLELVVDGNQVDAQSPNSA--STSADTNDPVFVGGFPGGLNQFGLTTNIRFRGCIRSLKLTKGT 369 (394) T ss_dssp EEEETTEEEEEETTEEEEEECCCTT--CCCBCCCBCCEESCCCTTCCCTTCSCCCCCEEEEEEEEEECTT T ss_pred EEEeCCEEEEEECCcccccccCCcc--ccccccCCCEEECCCCCcccccCccccCCccccccEEEECCcc Confidence 9999999999999987654322111 122345678999875210 134699999999996543No 28>2r1b_A Neurexin-1-beta, neurexin I-beta; beta-sandwich, cell adhesion, splicing; 1.72A {Rattus norvegicus} SCOP: b.29.1.4 PDB: 3mw2_A* 3b3q_E* 3mw3_A* Probab=98.11 E-value=3.3e-05 Score=82.19 Aligned_cols=127 Identities=16% Similarity=0.177 Sum_probs=83.3 Q ss_pred ceEEEEEEeecCCCCceEEEEEeCCCCeEEEEEEEcccccCceEEEEEEEeccCCcceeEEEe-eeccCCCCceEEEEEE Q FBpp0301686 87 EFAILITFRQSSLKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLASF-GVAHVPDKWNSIALQV 165 (1039) Q Consensus 87 eFSllaT~R~~~~~~g~LfsI~~~~d~~~qlgL~lsg~~~~~~~i~L~Y~~~~~~~~q~~~sF-~v~laDg~WHrlaLsV 165 (1039) .++|.+.||... ..+.||.+.+......+|.|+|..- .|.|.|....+. ..+.. ...+.|++||+|.|.. T Consensus 36 ~~~isl~frT~~-~~GlLl~~~~~~~~~d~l~l~L~~G-----~l~~~~~~G~~~---~~~~~~~~~l~DG~WH~V~v~r 106 (220) T 2r1b_A 36 ADRLAIGFSTVQ-KEAVLVRVDSSSGLGDYLELHIHQG-----KIGVKFNVGTDD---IAIEESNAIINDGKYHVVRFTR 106 (220) T ss_dssp EEEEEEEEECCC-SSEEEEEEEESTTCCCEEEEEEETT-----EEEEEEESSSSC---EEEECTTCCCCSSSCEEEEEEE T ss_pred CCEEEEEEEECC-CCeEEEEEcCCCCCCCEEEEEEeCC-----EEEEEEECCCCc---EEEecCCcCcCCCCCEEEEEEE Confidence 688888888765 4578888777422466888888543 577888654332 23333 5678899999999999 Q ss_pred eCCeEEEEEccccceee-ec-cCCCcce---------------------------eccCCeeEEEEecCcccCcccccce Q FBpp0301686 166 LSDKVSFYYDCELRNTT-LV-TREPIEL---------------------------VFDSASTLYIGQAGSIIGGKFEGYL 216 (1039) Q Consensus 166 ~g~~VtLyVDC~~~~t~-~l-~r~~~~l---------------------------~~~~~~~l~IGq~g~~~~~~F~G~L 216 (1039) .+..++|.||.....+. .. ......+ .++....||||-.. ....|+|=| T Consensus 107 ~~~~~~L~VD~~~~~~~~~~g~~~~~~l~~~~~~~~~~~g~~~~~~~~d~~~~~~~~n~~~~l~iGG~p--~~~~F~GCi 184 (220) T 2r1b_A 107 SGGNATLQVDSWPVIERYPAGNNDNERLAIARQRIPYRLGRVVDEWLLDKGRQLTIFNSQATIIIGGKE--QGQPFQGQL 184 (220) T ss_dssp ETTEEEEEETTSCCEEECC-----------------CHHHHHHHHHHHHHHHGGGSBCCEEEEEESSTT--TTCCCCEEE T ss_pred eCCEEEEEECCCcceeeccCCCCccceeeccccccceeecccccccccccccceeEecCcCcEEECCcc--CCCCCeEEE Confidence 99999999998764332 11 0000001 11223679998652 245699999 Q ss_pred eeeEEeeC Q FBpp0301686 217 EKINVYGN 224 (1039) Q Consensus 217 Q~L~i~~d 224 (1039) ++|+|--- T Consensus 185 ~~v~in~~ 192 (220) T 2r1b_A 185 SGLYYNGL 192 (220) T ss_dssp EEEEETTB T ss_pred CcEEECCE Confidence 99988543No 29>1a8d_A Tetanus neurotoxin; clostridial, ganglioside binding region; 1.57A {Clostridium tetani} SCOP: b.29.1.6 b.42.4.2 PDB: 1af9_A 1fv3_A* 1fv2_A* 3hmy_A* 3hn1_A* 1d0h_A* 1dfq_A* 1dll_A* 1yxw_A* 1yyn_A* 1diw_A* Probab=97.83 E-value=0.00063 Score=80.00 Aligned_cols=165 Identities=10% Similarity=0.161 Sum_probs=96.9 Q ss_pred CcEEEccCCCCCcceEEcCCcc----ccCcccccCCCCCc-ceEEEEEEeecCCC-C------ceEEEEEeCCCC----- Q FBpp0301686 51 AGIEFGEAEDGFPAFRFLQTAD----VKSPYRMLLPEKLY-EFAILITFRQSSLK-G------GYLFSVVNPLDT----- 113 (1039) Q Consensus 51 ~GV~~v~G~d~~pAy~f~~~a~----l~~pt~~~fp~~~~-eFSllaT~R~~~~~-~------g~LfsI~~~~d~----- 113 (1039) ..++++.|.. ..|+.|..... +..|.. ++...+. +|||.+|+|+.... . .-+++|.+..+. T Consensus 47 G~vs~v~G~~-GkAl~fdG~~~S~~~V~lp~~-ll~~~~~~sFTISfWVK~~~~~t~~~~~y~~g~~~Ii~~~~~~w~~~ 124 (452) T 1a8d_A 47 PDAQLVPGIN-GKAIHLVNNESSEVIVHKAMD-IEYNDMFNNFTVSFWLRVPKVSASHLEQYGTNEYSIISSMKKHSLSI 124 (452) T ss_dssp TTCEEEECSS-SEEEEEESSTTCCEEEECCGG-GTTTTTTSCEEEEEEEECCCCCHHHHHHHTTCEEEEEECCEECGGGC T ss_pred CCceecCCcc-cceEEEcCCCCceEEEecCch-hcccCCCCCEEEEEEEeccccCcccccccccCceEEEeccCcccccC Confidence 4577887755 47899985532 444433 3334456 99999999997653 1 123444433211 Q ss_pred eEEEEEEEcccccCceEEEEEEEeccCCcceeEEEe-----eec-cCCCCceEEEEEEe-CCeEEEEEccccceeeeccC Q FBpp0301686 114 VVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLASF-----GVA-HVPDKWNSIALQVL-SDKVSFYYDCELRNTTLVTR 186 (1039) Q Consensus 114 ~~qlgL~lsg~~~~~~~i~L~Y~~~~~~~~q~~~sF-----~v~-laDg~WHrlaLsV~-g~~VtLyVDC~~~~t~~l~r 186 (1039) ...+.|.+... .+.|.+....+.. +...| .++ +.+++||||++.+. ...++||||-+++.+..+.. T Consensus 125 ~~G~~i~l~~g-----~l~f~~~~~~G~~--~~i~~~~~~~~i~~v~~g~W~HVAvT~D~~~~~~lYVNG~lv~~~~~~~ 197 (452) T 1a8d_A 125 GSGWSVSLKGN-----NLIWTLKDSAGEV--RQITFRDLPDKFNAYLANKWVFITITNDRLSSANLYINGVLMGSAEITG 197 (452) T ss_dssp EEEEEEEEETT-----EEEEEEECTTSCE--EEEEEECCSBTTSCSSSSSCEEEEEEECTTSEEEEEETTEEEEEEECTT T ss_pred CCCcEEEEcCC-----eEEEEEEeCCCCc--ceeEeeccccccCcCCCCceEEEEEEEeCCCCEEEeECCEEeeeecccc Confidence 34455555432 3555544332221 22222 122 23799999999999 45679999999988764432 Q ss_pred CCcceeccCCeeEEEEecCcccCcccccceeeeEEeeCcccc Q FBpp0301686 187 EPIELVFDSASTLYIGQAGSIIGGKFEGYLEKINVYGNPDAI 228 (1039) Q Consensus 187 ~~~~l~~~~~~~l~IGq~g~~~~~~F~G~LQ~L~i~~dp~~~ 228 (1039) . ..+ .....+.|+.... ....|.|.|.+|+|+..+..+ T Consensus 198 ~-~~i--~~~~~~~lgiG~~-~d~~f~G~IDEvRIynrALS~ 235 (452) T 1a8d_A 198 L-GAI--REDNNITLKLDRC-NNNNQYVSIDKFRIFCKALNP 235 (452) T ss_dssp C-CCC--CCCSEEEEEEESC-CCTTCEEEEEEEEEESSCCCH T ss_pred c-ccc--ccCCeEEEEEccC-CCCCCcEEEEEEEEECCcCCH Confidence 1 112 2233445544221 235699999999999987444No 30>1h30_A GAS6, growth-arrest-specific protein; laminin G-domain protein, vitamin K-dependent protein, AXL/SKY/MER ligand, laminin G- like domain; 2.2A {Homo sapiens} SCOP: b.29.1.4 b.29.1.4 PDB: 2c5d_A* 4ra0_A* Probab=97.82 E-value=0.0003 Score=81.86 Aligned_cols=127 Identities=13% Similarity=0.149 Sum_probs=85.9 Q ss_pred ceEEEEEEeecCCCCceEEEEEeCCCCeEEEEEEEcccccCceEEEEEEEeccCCcceeEEEeeeccCCCCceEEEEEEe Q FBpp0301686 87 EFAILITFRQSSLKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLASFGVAHVPDKWNSIALQVL 166 (1039) Q Consensus 87 eFSllaT~R~~~~~~g~LfsI~~~~d~~~qlgL~lsg~~~~~~~i~L~Y~~~~~~~~q~~~sF~v~laDg~WHrlaLsV~ 166 (1039) .|+|.+.||... ..|.||-..+. +...+|.|+|..- .|.|.|...++. .+.+-...+.|++||+|.|... T Consensus 62 ~~~isl~frT~~-~~GlLl~~~~~-~~~d~~~L~L~~G-----~l~~~~~~g~~~---~~~~~~~~lnDg~WH~V~v~~~ 131 (422) T 1h30_A 62 RLVAEFDFRTFD-PEGILLFAGGH-QDSTWIVLALRAG-----RLELQLRYNGVG---RVTSSGPVINHGMWQTISVEEL 131 (422) T ss_dssp CCEEEEEEEECC-SSEEEEEEESC-TTSEEEEEEEETT-----EEEEEEEETTEE---EEEEEEEECCSSCCEEEEEEEC T ss_pred cEEEEEEEEeCC-CCeEEEEeCCC-CCCCEEEEEEECC-----EEEEEEECCCCc---eEEeCCceecCCCCEEEEEEEc Confidence 788889999765 55788888775 4467899988764 477777654321 2222355788999999999999 Q ss_pred CCeEEEEEccccceeeeccCCCcceecc-CCeeEEEEecCcc-------cCcccccceeeeEEee Q FBpp0301686 167 SDKVSFYYDCELRNTTLVTREPIELVFD-SASTLYIGQAGSI-------IGGKFEGYLEKINVYG 223 (1039) Q Consensus 167 g~~VtLyVDC~~~~t~~l~r~~~~l~~~-~~~~l~IGq~g~~-------~~~~F~G~LQ~L~i~~ 223 (1039) +..++|+||...+.+...+.....+... -...||||-.... ....|.|=|++|+|+- T Consensus 132 ~~~~~l~vD~~~~~~~~~~g~~~~l~~~~~~~~lyvGG~p~~~~~~~~~~~~~F~GCi~~l~~~n 196 (422) T 1h30_A 132 ARNLVIKVNRDAVMKIAVAGDLFQPERGLYHLNLTVGGIPFHEKDLVQPINPRLDGCMRSWNWLN 196 (422) T ss_dssp SSEEEEEETTEEEEEEECCSCSSEEETTEEECEEEESSCSSCGGGSSSCCCCCCCEEEEEEEEC- T ss_pred CCEEEEEECCcceEeeecCCcccccccCcccceEEEecccCcccccccccCCCCCEEeeeeEEcC Confidence 9999999998765443333322233210 1357999864211 1246999999999633No 31>2jd4_A Laminin subunit alpha-1; basement membrane protein, metal binding protein; 1.9A {Mus musculus} SCOP: b.29.1.0 Probab=97.76 E-value=0.0004 Score=79.62 Aligned_cols=125 Identities=16% Similarity=0.267 Sum_probs=84.0 Q ss_pred ceEEEEEEeecCCCCceEEEEEeCCCCeEEEEEEEcccccCceEEEEEEEeccCCcceeEEEeeeccCCCCceEEEEEEe Q FBpp0301686 87 EFAILITFRQSSLKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLASFGVAHVPDKWNSIALQVL 166 (1039) Q Consensus 87 eFSllaT~R~~~~~~g~LfsI~~~~d~~~qlgL~lsg~~~~~~~i~L~Y~~~~~~~~q~~~sF~v~laDg~WHrlaLsV~ 166 (1039) +|+|.++||.... .+.||-..+. +...+|.|+|..- .|.|.|.-.++. ..++....+.|++||+|.|... T Consensus 44 ~~~is~~frT~~~-~GlLl~~~~~-~~~d~~~l~L~~G-----~l~~~~~~g~~~---~~~~~~~~v~Dg~WH~V~v~r~ 113 (383) T 2jd4_A 44 RLQVQLSIRTFAS-SGLIYYVAHQ-NQMDYATLQLQEG-----RLHFMFDLGKGR---TKVSHPALLSDGKWHTVKTEYI 113 (383) T ss_dssp EEEEEEEEEECCS-CEEEEEEECT-TSSSEEEEEEETT-----EEEEEEECSSCE---EEEECCCCCTTSSCEEEEEEEE T ss_pred ceEEEEEEEeCCC-CeEEEEeCCC-CCCcEEEEEEECC-----EEEEEEECCCCe---EEEeCCccccCCCCEEEEEEEE Confidence 8999999997654 4677776653 3456888888654 477888543322 2333355778999999999999 Q ss_pred CCeEEEEEccccceeeeccCCCcceeccCCeeEEEEecCcc--------cCcccccceeeeEEee Q FBpp0301686 167 SDKVSFYYDCELRNTTLVTREPIELVFDSASTLYIGQAGSI--------IGGKFEGYLEKINVYG 223 (1039) Q Consensus 167 g~~VtLyVDC~~~~t~~l~r~~~~l~~~~~~~l~IGq~g~~--------~~~~F~G~LQ~L~i~~ 223 (1039) +..++|+||-........+.....| +....||||-.... ....|.|-|++|+|.. T Consensus 114 ~~~~~L~vD~~~~~~~~~~~~~~~l--~~~~~l~iGG~p~~~~~~~~~~~~~~F~GCi~~l~in~ 176 (383) T 2jd4_A 114 KRKAFMTVDGQESPSVTVVGKATTL--DVERKLYLGGLPSHYRARNIGTITHSIPACIGEIMVNG 176 (383) T ss_dssp TTEEEEEETTEECCCEECCSSCCCC--CCCSEEEESSCCTTCCCCSSCSCCSBCCEEEEEEEETT T ss_pred CCEEEEEEeCCccceeecCCCCcee--cCCCCEEEeCcCccccccccccccCCeeeEeeeEEECC Confidence 9999999997655443322222223 23467999854210 1246999999999854No 32>4dqa_A Uncharacterized protein; two domains structure, DUF 1735, laminin_G_3 concanavalin A- lectin/glucanases superfamily domain; HET: MSE; 1.50A {Bacteroides ovatus} Probab=97.74 E-value=0.00038 Score=79.36 Aligned_cols=148 Identities=12% Similarity=0.133 Sum_probs=90.0 Q ss_pred CcceEEcCCccccCcccccCCCCC-c-ceEEEEEEeecCCC-CceEEEEEeCCCCeEEEEEEEcccccCc-eEEEEEEEe Q FBpp0301686 62 FPAFRFLQTADVKSPYRMLLPEKL-Y-EFAILITFRQSSLK-GGYLFSVVNPLDTVVQLGVHLSPVVKNS-YNVSLVYTQ 137 (1039) Q Consensus 62 ~pAy~f~~~a~l~~pt~~~fp~~~-~-eFSllaT~R~~~~~-~g~LfsI~~~~d~~~qlgL~lsg~~~~~-~~i~L~Y~~ 137 (1039) ..|+.|.. ..+..+.. ..+ . +|+|.+|||+.... ...||+. ++. |.|++.....+. ..-.|.+.. T Consensus 140 ~~al~f~G-~yi~v~~~----~~~~~~~fTi~~Wvk~~~~~~~~~i~g~----~g~--~~l~~~~~~~gi~~~~~l~~~g 208 (355) T 4dqa_A 140 TKAGNFSN-HYISVKFP----VGTFFSSFTYEALINVDYFLDNNTIMGT----EGV--MILRIGDAGGGITPKDYLEVAG 208 (355) T ss_dssp CEEEEEES-CCEEECCC----TTCCBSSEEEEEEEEESCCCSSEEEEEE----TTT--EEEEEEEGGGTSEEEEEEEEEE T ss_pred ccccccCC-ceEEecCC----CCCCccCEEEEEEEEccccCCcceEEcC----CCc--EEEEecCCCcCcCcCCEEEEcC Confidence 45677764 44444422 223 3 99999999997554 3445542 222 334443211000 012344432 Q ss_pred ccCCcceeEEEeeeccCCCCceEEEEEEe--CCeEEEEEccccceeeeccCCCcceeccCCeeEEEEecCcc--cCcccc Q FBpp0301686 138 ADQNIGRKLASFGVAHVPDKWNSIALQVL--SDKVSFYYDCELRNTTLVTREPIELVFDSASTLYIGQAGSI--IGGKFE 213 (1039) Q Consensus 138 ~~~~~~q~~~sF~v~laDg~WHrlaLsV~--g~~VtLyVDC~~~~t~~l~r~~~~l~~~~~~~l~IGq~g~~--~~~~F~ 213 (1039) . . +. .-...+.+++||||++... +..++||||.+++.+....... +.+.....++||+.... ....|. T Consensus 209 ~---~--~~-~s~~~~~~~~W~Hva~t~d~~~~~~~lYvnG~~~~~~~~~~~~--~~~~~~~~l~IG~~~~~~~~~~~f~ 280 (355) T 4dqa_A 209 G---Q--NY-RVTKPLLTNRWYHVALTYDQPTGKTGIYVNGEKWAGSDWGIDG--FDPNSDMGFYIGRIYGFKWGERPFH 280 (355) T ss_dssp S---S--CE-ECSSCCCSSCEEEEEEEEETTTTEEEEEETTEEEEEEECCCCC--BCTTSTTCEEESCCTTCTTCCCCCE T ss_pred C---C--cc-ccCCccCCCCEEEEEEEEECCCCEEEEEECCEEEeEEEcCCCc--cccCCCceEEEcCCCCCCCCCccce Confidence 1 1 11 1133567899999999999 8999999999998876543322 22233467999986321 246799 Q ss_pred cceeeeEEeeCcccc Q FBpp0301686 214 GYLEKINVYGNPDAI 228 (1039) Q Consensus 214 G~LQ~L~i~~dp~~~ 228 (1039) |.|.+|||+...... T Consensus 281 G~idevri~~~aLs~ 295 (355) T 4dqa_A 281 GKMSEVRVWSVARTE 295 (355) T ss_dssp EEEEEEEEESSCCCH T ss_pred EEEEEEEEECCCCCH Confidence 999999999987544No 33>1dyk_A Laminin alpha 2 chain; metal binding protein; 2.0A {Mus musculus} SCOP: b.29.1.4 b.29.1.4 PDB: 1okq_A 1qu0_A Probab=97.63 E-value=0.0006 Score=78.48 Aligned_cols=126 Identities=16% Similarity=0.236 Sum_probs=84.2 Q ss_pred ceEEEEEEeecCCCCceEEEEEeCCCCeEEEEEEEcccccCceEEEEEEEeccCCcceeEEEeeeccCCCCceEEEEEEe Q FBpp0301686 87 EFAILITFRQSSLKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLASFGVAHVPDKWNSIALQVL 166 (1039) Q Consensus 87 eFSllaT~R~~~~~~g~LfsI~~~~d~~~qlgL~lsg~~~~~~~i~L~Y~~~~~~~~q~~~sF~v~laDg~WHrlaLsV~ 166 (1039) +|+|.++||... ..+.||-..+. +...+|.|+|..- .|.|.|....+. ..++....+.|++||+|.|... T Consensus 58 ~~~is~~frT~~-~~GlLl~~~~~-~~~d~~~l~l~~G-----~l~~~~~~g~g~---~~~~~~~~~nDg~WH~V~v~~~ 127 (394) T 1dyk_A 58 RLTIELEVRTEA-ESGLLFYMARI-NHADFATVQLRNG-----FPYFSYDLGSGD---TSTMIPTKINDGQWHKIKIVRV 127 (394) T ss_dssp EEEEEEEEEECC-SCEEEEEEECT-TSSSEEEEEEETT-----EEEEEEESSSCE---EEEECCSCCCSSSCEEEEEEEE T ss_pred ceEEEEEEEECC-CCeEEEEeCCC-CCCCeEEEEEECC-----EEEEEEECCCCc---EEEEecceecCCCeEEEEEEEe Confidence 789999999764 45687776653 3456888888654 477777643322 2333355778999999999999 Q ss_pred CCeEEEEEccccceeeeccCCCcceeccCCeeEEEEecCcc--------cCcccccceeeeEEeeCc Q FBpp0301686 167 SDKVSFYYDCELRNTTLVTREPIELVFDSASTLYIGQAGSI--------IGGKFEGYLEKINVYGNP 225 (1039) Q Consensus 167 g~~VtLyVDC~~~~t~~l~r~~~~l~~~~~~~l~IGq~g~~--------~~~~F~G~LQ~L~i~~dp 225 (1039) +..++|+||-....... +.....| +....||||-.... ....|.|-|++|+|...+ T Consensus 128 ~~~~~L~vD~~~~~~~~-~~~~~~l--~~~~~l~lGG~p~~~~~~~~~~~~~~F~GCi~~l~in~~~ 191 (394) T 1dyk_A 128 KQEGILYVDDASSQTIS-PKKADIL--DVVGILYVGGLPINYTTRRIGPVTYSLDGCVRNLHMEQAP 191 (394) T ss_dssp TTEEEEEETTEEEEEEC-STTCCCC--CCCSEEEESSCCTTCCCCSSCSCCSBCSEEEEEEEESSSC T ss_pred CCEEEEEECCcccccCc-CCCCccc--cCCCceEEcccCCcccccccccCCCCceEEeeEEEECCEE Confidence 99999999977544332 1111223 33567999764211 113599999999986543No 34>2jkb_A Sialidase B; intramolecular trans-sialidase, lyase, glycosidase, neuraminidase; HET: SKD; 1.54A {Streptococcus pneumoniae} PDB: 2vw2_A* 2vw1_A* 2vw0_A* 4foq_A 4fov_A* 4fow_A 4foy_A* 4fp2_A* 4fp3_A* 4fpc_A* 4fpe_A* 4fpf_A* 4fpg_A* 4fph_A* 4fpj_A* 4fpk_A* 4fpl_A* 4fpo_B* 4fpy_A* 4fq4_A* Probab=97.59 E-value=0.00049 Score=85.38 Aligned_cols=163 Identities=10% Similarity=0.063 Sum_probs=100.6 Q ss_pred CcceEEcCCccccCcccccCCCCC--cceEEEEEEeecC-CCCceEEEEEeCCC--CeEEEEEEEcccccCceEEEEEEE Q FBpp0301686 62 FPAFRFLQTADVKSPYRMLLPEKL--YEFAILITFRQSS-LKGGYLFSVVNPLD--TVVQLGVHLSPVVKNSYNVSLVYT 136 (1039) Q Consensus 62 ~pAy~f~~~a~l~~pt~~~fp~~~--~eFSllaT~R~~~-~~~g~LfsI~~~~d--~~~qlgL~lsg~~~~~~~i~L~Y~ 136 (1039) ..|+.|.... +..+... ...+ -+|||.++||+.. .+...||++.+... ...+|.|.+.... ++.|... T Consensus 34 g~a~~fdG~~-v~l~~~~--~~~l~~~~fTv~~Wvk~~~~~~~~~lfs~~~~~~~~~~~~~~l~~~~~g----~~~~~~~ 106 (686) T 2jkb_A 34 GGSYQLNNKS-IDISSLL--LDKLSGESQTVVMKFKADKPNSLQALFGLSNSKAGFKNNYFSIFMRDSG----EIGVEIR 106 (686) T ss_dssp EEEEEEESSC-EECHHHH--GGGCCSSCEEEEEEEECSSCCSEEEEEEEECCSTTCTTCEEEEEEETTS----CEEEEEE T ss_pred cceEEecCce-EECchhc--cccCCCCCeEEEEEEEeCCCCCCCEEEEecCCCCCCccccEEEEEeCCC----eEEEEEE Confidence 3578886433 4444332 2345 3999999999974 45557999886422 2356778776532 4666665 Q ss_pred eccCCcceeEEEeeecc-----CCCCceEEEEEEeC--CeEEEEEccccceeeeccCCCcceeccCCeeEEEEecCcc-- Q FBpp0301686 137 QADQNIGRKLASFGVAH-----VPDKWNSIALQVLS--DKVSFYYDCELRNTTLVTREPIELVFDSASTLYIGQAGSI-- 207 (1039) Q Consensus 137 ~~~~~~~q~~~sF~v~l-----aDg~WHrlaLsV~g--~~VtLyVDC~~~~t~~l~r~~~~l~~~~~~~l~IGq~g~~-- 207 (1039) ..+.... ..+.....+ .+++||||++...+ ..++||||-+++.+.........-.+.....|+||+.... T Consensus 107 ~~~~~~~-~~~~~~~~~~~~~~~~g~W~Hva~t~d~~~g~~~lYvnG~~~~~~~~~~~~~~~~~~~~~~~~IG~~~~~g~ 185 (686) T 2jkb_A 107 DAQKGIN-YLFSRPASLWGKHKGQAVENTLVFVSDSKDKTYTMYVNGIEVFSETVDTFLPISNINGIDKATLGAVNREGK 185 (686) T ss_dssp ETTTTEE-EEEEESSCCCCEETTEECCEEEEEEEETTTTEEEEEETTEEEEEEECSSCCCGGGSTTCCEEEESSEEETTE T ss_pred eCCCcee-EEeeccccccccccCCCCeEEEEEEEECCCCeEEEEECCEEEEeeccccceecccCCCCceEEECCeecCCC Confidence 4432211 111111111 25899999999976 4899999999988765432211001233458999984211 Q ss_pred cCcccccceeeeEEeeCcccccccC Q FBpp0301686 208 IGGKFEGYLEKINVYGNPDAINVTC 232 (1039) Q Consensus 208 ~~~~F~G~LQ~L~i~~dp~~~~~~C 232 (1039) ....|.|.|.+|+|+.......++. T Consensus 186 ~~~~f~G~Idev~i~~~aLs~~eI~ 210 (686) T 2jkb_A 186 EHYLAKGSIDEISLFNKAISDQEVS 210 (686) T ss_dssp EESCCEEEEEEEEEESSCCCHHHHH T ss_pred ccccccceEEEEEEecccCCHHHHH Confidence 1224999999999998876655544No 35>2vu9_A Botulinum neurotoxin A heavy chain; hydrolase, metalloprotease, ganglioside, metal-B toxin, protease, membrane, receptor, secreted; HET: BGC GAL SIA NGA; 1.6A {Clostridium botulinum} SCOP: b.29.1.6 b.42.4.2 PDB: 2vua_A 4jra_A 3fuo_A 4iqp_A Probab=97.56 E-value=0.0022 Score=73.47 Aligned_cols=169 Identities=8% Similarity=0.116 Sum_probs=104.1 Q ss_pred CCcEEEccCCCCCcceEEcCCc---cccCcccccCCCCCc-ceEEEEEEeecCCCCce----EEEEEeCCCCeEEEEEEE Q FBpp0301686 50 FAGIEFGEAEDGFPAFRFLQTA---DVKSPYRMLLPEKLY-EFAILITFRQSSLKGGY----LFSVVNPLDTVVQLGVHL 121 (1039) Q Consensus 50 ~~GV~~v~G~d~~pAy~f~~~a---~l~~pt~~~fp~~~~-eFSllaT~R~~~~~~g~----LfsI~~~~d~~~qlgL~l 121 (1039) ...|+++.| . ..||.+...+ ..-.-+..++-+.++ +|||.+|+|..+.+..+ .++|.+......-..|.+ T Consensus 48 ~G~v~~~~G-~-g~A~~L~~s~~s~~~v~~~ndii~n~~~nnFSIsFWvr~~k~~~~~~~~~e~tIIn~k~~NsGW~Isl 125 (444) T 2vu9_A 48 GSKVNFDPI-D-KNQIQLFNLESSKIEVILKNAIVYNSMYENFSTSFWIRIPKYFNSISLNNEYTIINCMENNSGWKVSL 125 (444) T ss_dssp CTTEEECSS-C-TTCEEEESSTTCCEEEECCGGGSCEESSCCEEEEEEEECCCCCSGGGTTCCEEEEEEEETTEEEEEEE T ss_pred CCceEEEec-C-CcEEEeccCCCceEEEecCchhhhccccCceEEEEEEECCCCCcccccCCceEeEeeccCCCCeEEEE Confidence 456889988 4 4588886444 222334455556677 99999999986666533 455554332333344445 Q ss_pred cccccCceEEEEEEEeccCCcceeEEEeee----ccC--CCCceEEEEEEe-CCeEEEEEccccceeeeccCCCcceecc Q FBpp0301686 122 SPVVKNSYNVSLVYTQADQNIGRKLASFGV----AHV--PDKWNSIALQVL-SDKVSFYYDCELRNTTLVTREPIELVFD 194 (1039) Q Consensus 122 sg~~~~~~~i~L~Y~~~~~~~~q~~~sF~v----~la--Dg~WHrlaLsV~-g~~VtLyVDC~~~~t~~l~r~~~~l~~~ 194 (1039) ... .+.+-..+..+ ..+...|.. .+. .++||+|+++|. -..+++|+|.+++.+..+.-.. .+.+ T Consensus 126 ~~n-----~liwtl~dsng--n~k~i~f~y~~~~~I~dyinkW~hVtIt~Drlg~a~IYING~lv~~k~I~~lg-~I~~- 196 (444) T 2vu9_A 126 NYG-----EIIWTLQDTQE--IKQRVVFKYSQMINISDYINRWIFVTITNNRLNNSKIYINGRLIDQKPISNLG-NIHA- 196 (444) T ss_dssp ETT-----EEEEEEECTTS--CEEEEEEECCSBSSSCSSTTSCEEEEEEECTTSEEEEEETTEEEEEEECTTCC-CEEC- T ss_pred CCC-----eEEEEEEecCC--ceeeEEEecccccccccccCceEEEEEEECCCCCEEEEECCEEeeecchhhcc-ceee- Confidence 443 33433333322 335556642 222 389999999999 5677999999999998665431 2322 Q ss_pred CCeeEEEEecCcccCcccccceeeeEEeeCccccccc Q FBpp0301686 195 SASTLYIGQAGSIIGGKFEGYLEKINVYGNPDAINVT 231 (1039) Q Consensus 195 ~~~~l~IGq~g~~~~~~F~G~LQ~L~i~~dp~~~~~~ 231 (1039) +..+-++-.+ .....+++.|.+|+|+..+-..++. T Consensus 197 -sn~i~l~v~~-~~d~~~~~~ID~f~Ifnk~Lt~~EI 231 (444) T 2vu9_A 197 -SNNIMFKLDG-CRDTHRYIWIKYFNLFDKELNEKEI 231 (444) T ss_dssp -CSEEEEEEES-CCCTTCEEEEEEEEEESSCCCHHHH T ss_pred -CCeEEEEecc-cCCCccceeeeeeEEecccCCHHHH Confidence 2333343322 2346688999999999988655443No 36>2wjs_A Laminin subunit alpha-2; integrin, secreted, coiled coil, glycoprotein, laminin EGF-like domain, extracellular matrix, laminin G-like domain; HET: NAG; 2.80A {Mus musculus} Probab=97.52 E-value=0.00063 Score=83.04 Aligned_cols=124 Identities=13% Similarity=0.152 Sum_probs=79.7 Q ss_pred ceEEEEEEeecCCCCceEEEEEeCCCCeEEEEEEEcccccCceEEEEEEEeccCCcceeEE--EeeeccCCCCceEEEEE Q FBpp0301686 87 EFAILITFRQSSLKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLA--SFGVAHVPDKWNSIALQ 164 (1039) Q Consensus 87 eFSllaT~R~~~~~~g~LfsI~~~~d~~~qlgL~lsg~~~~~~~i~L~Y~~~~~~~~q~~~--sF~v~laDg~WHrlaLs 164 (1039) ++.|.+.||.. +..|.||.+.+. ...+|.|.|..- .|.|.|....+.. ..++ .....+.||+||+|.|. T Consensus 408 ~~~i~~~FRT~-~~~GlLl~~~~~--~~~~l~l~L~~G-----~l~~~~~~g~~~~-~~~~~~~~~~~l~DG~WH~V~l~ 478 (608) T 2wjs_A 408 GTEINLSFSTR-NESGIILLGSGG--GQAYYAIFLNKG-----RLEVHLSSGTRTM-RKIVIKPEPNRFHDGREHSVHVE 478 (608) T ss_dssp TEEEEEEEEES-CSSEEEEEEC-----CCEEEEEEETT-----EEEEEEEC----C-EEEEECCCSSCSSSSSCEEEEEE T ss_pred CcEEEEEEEeC-CCceEEEEEcCC--CCCEEEEEEECC-----EEEEEEECCCCce-eeEEEecCCcccCCCCEEEEEEE Confidence 77888888865 456788876553 345778877643 4777775433221 1122 23567889999999999 Q ss_pred EeCCeEEEEEccccceeeeccCCCcceeccCCeeEEEEecCcc-------cCcccccceeeeEEee Q FBpp0301686 165 VLSDKVSFYYDCELRNTTLVTREPIELVFDSASTLYIGQAGSI-------IGGKFEGYLEKINVYG 223 (1039) Q Consensus 165 V~g~~VtLyVDC~~~~t~~l~r~~~~l~~~~~~~l~IGq~g~~-------~~~~F~G~LQ~L~i~~ 223 (1039) ..+..++|+||.....+..+... ..+++ ..||||..... ....|+|=|++|+|-- T Consensus 479 ~~~~~~~L~VD~~~~~~~~~~~~-~~l~~---~~lylGG~p~~~~~~~~~~~~~F~GCi~~v~in~ 540 (608) T 2wjs_A 479 RTRGIFTVQIDEDRRHMQNLTEE-QPIEV---KKLFVGGAPPEFQPSPLRNIPAFQGCVWNLVINS 540 (608) T ss_dssp ECSSEEEEEESSSCCEEEECCCC-SCBCC---SCEEESCCCC--------CCCCCCEEEEEEEETT T ss_pred EeCCEEEEEECCCcceeeccCCC-ccccc---ccEEEeCCCccccccccccCCCCEEEcCeeEECC Confidence 99999999999987654433322 22322 36899865211 1246999999999853No 37>3vuo_A NTNHA; protection of botulinum neurotoxin, botulinum neurotoxin, to; 3.90A {Clostridium botulinum} Probab=97.48 E-value=0.0018 Score=81.56 Aligned_cols=155 Identities=12% Similarity=0.186 Sum_probs=92.0 Q ss_pred CcEEEccCCCCCcceEEcCCcc-ccCcccccCCCCCc-ceEEEEEEeec-CCC-CceEEEEEeCCCCeEEEEEEEccccc Q FBpp0301686 51 AGIEFGEAEDGFPAFRFLQTAD-VKSPYRMLLPEKLY-EFAILITFRQS-SLK-GGYLFSVVNPLDTVVQLGVHLSPVVK 126 (1039) Q Consensus 51 ~GV~~v~G~d~~pAy~f~~~a~-l~~pt~~~fp~~~~-eFSllaT~R~~-~~~-~g~LfsI~~~~d~~~qlgL~lsg~~~ 126 (1039) .+++++.|..+ .|+.|..... +..+... +..... +|||.+|+|+. ... ...+|+-.+. ...+.|.+... T Consensus 864 G~~sfv~Gv~G-kAL~FDGSd~yV~LPn~l-i~nslt~sFTVSFWVKplg~~T~~t~IIsskdn---nsGw~LsL~~n-- 936 (1196) T 3vuo_A 864 ESVELVYGVNG-ESLYLKSPNETVEFSNNF-FTNGLTNNFTICFWLRFTGKDDDKTRLIGNKVN---NCGWEIYFEDN-- 936 (1196) T ss_dssp TTCEEEECSSS-EEEEECSSSCCEEEECGG-GGCCSSCCEEEEEEEEECCCCSSCEEEEEEECS---SCEEEEEEETT-- T ss_pred CCceecCCCcC-ceeEEcCCCceEEeCCcc-cccCCCCcEEEEEEEccCCCCCccceEEEecCC---CCCcEEEEcCC-- Confidence 35667766544 5888876433 4433322 222234 89999999994 222 1236633321 22234545332 Q ss_pred CceEEEEEEEeccCCcceeEEEeeeccCCCCceEEEEEEe--CCeEEEEEccccceeeeccCCCcceeccCCeeEE-EEe Q FBpp0301686 127 NSYNVSLVYTQADQNIGRKLASFGVAHVPDKWNSIALQVL--SDKVSFYYDCELRNTTLVTREPIELVFDSASTLY-IGQ 203 (1039) Q Consensus 127 ~~~~i~L~Y~~~~~~~~q~~~sF~v~laDg~WHrlaLsV~--g~~VtLyVDC~~~~t~~l~r~~~~l~~~~~~~l~-IGq 203 (1039) .+.+...+..+. .+...+. .+..++||||++.+. +..++||||.+++.+..+.... .+ ..+..+. +|. T Consensus 937 ---tL~Fsi~Ds~Gn--eqsI~~d-dI~~GkW~HVAVTyDr~G~aLKLYVNGeLVaS~sisgL~-dI--~ssg~IsFIG~ 1007 (1196) T 3vuo_A 937 ---GLVFEIIDSNGN--QESVYLS-NVINNNWYYISISVDRLKDQLLIFINDKNVANVSIEQIL-NI--YSTNVISLVNK 1007 (1196) T ss_dssp ---EEEEEEECTTCC--EEEEEEC-SCTTSCCEEEEEEEETTTTEEEEEETTEEEEEEECTTCC-CC--CCCSEEEECCC T ss_pred ---cEEEEEEeCCCc--ceeeecC-CCCCCCEEEEEEEEECCCCEEEEeECCEEccccccccCc-cc--ccCCceeEecC Confidence 355555443332 2334444 556799999999999 5677999999998887544322 22 1223333 443 Q ss_pred cCcccCcccccceeeeEEeeCcccc Q FBpp0301686 204 AGSIIGGKFEGYLEKINVYGNPDAI 228 (1039) Q Consensus 204 ~g~~~~~~F~G~LQ~L~i~~dp~~~ 228 (1039) . |.|.|.+|||+..+..+ T Consensus 1008 n-------FnG~IDEVRIYNRALSa 1025 (1196) T 3vuo_A 1008 N-------NSIYVEELSVLDKPVAS 1025 (1196) T ss_dssp S-------SCEEEEEEEEESSCCCH T ss_pred C-------CcEEeeEEEEECCCCCH Confidence 2 89999999999987433No 38>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus} Probab=97.47 E-value=0.0012 Score=76.58 Aligned_cols=123 Identities=18% Similarity=0.308 Sum_probs=80.4 Q ss_pred ceEEEEEEeecCCCCceEEEEEeCCCCeEEEEEEEcccccCceEEEEEEEeccCCcceeEEE--eeeccCCCCceEEEEE Q FBpp0301686 87 EFAILITFRQSSLKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLAS--FGVAHVPDKWNSIALQ 164 (1039) Q Consensus 87 eFSllaT~R~~~~~~g~LfsI~~~~d~~~qlgL~lsg~~~~~~~i~L~Y~~~~~~~~q~~~s--F~v~laDg~WHrlaLs 164 (1039) +|+|.+.||.... .+.||-..+ +...+|.|+|..- .|.|.|....+. ..++ -...+.|++||+|.|. T Consensus 27 ~~~is~~frT~~~-~GlLl~~~~--~~~df~~l~L~~G-----~l~~~~~~G~g~---~~~~~~s~~~vnDg~WH~V~v~ 95 (410) T 3asi_A 27 SMHLFFQFKTTSL-DGLILYNSG--DGNDFIVVELVKG-----YLHYVFDLGNGA---NLIKGSSNKPLNDNQWHNVMIS 95 (410) T ss_dssp CEEEEEEEECSCS-CEEEEEEEB--STTCEEEEEEETT-----EEEEEEESSSCE---EEEECCCSSCSCSSSCEEEEEE T ss_pred eEEEEEEEEECCC-CEEEEEeCC--CCCCeEEEEEECC-----EEEEEEECCCCc---EEEEecCCCccCCCCCEEEEEE Confidence 7899999997654 467764433 3466888888654 477777543221 2222 2457889999999999 Q ss_pred EeCCe-EEEEEccccceeeeccCCCcceeccCCeeEEEEecCcc----------cCcccccceeeeEEeeC Q FBpp0301686 165 VLSDK-VSFYYDCELRNTTLVTREPIELVFDSASTLYIGQAGSI----------IGGKFEGYLEKINVYGN 224 (1039) Q Consensus 165 V~g~~-VtLyVDC~~~~t~~l~r~~~~l~~~~~~~l~IGq~g~~----------~~~~F~G~LQ~L~i~~d 224 (1039) ..... ++|+||........ . ....| +....||||-.... ....|+|=|++|+|-.. T Consensus 96 ~~~~~~~~L~vD~~~~~~~~-~-~~~~l--~~~~~lyvGG~p~~~~~~~~~~~~~~~~F~GCi~~v~in~~ 162 (410) T 3asi_A 96 RDTSNLHTVKIDTKITTQIT-A-GARNL--DLKSDLYIGGVAKETYKSLPKLVHAKEGFQGCLASVDLNGR 162 (410) T ss_dssp ECTTCEEEEEETTEEEEEEC-T-TCCCC--CBCSCEEESCCCGGGGGGSCTTCCCSSBCCEEEEEEESSSC T ss_pred EcCCccEEEEECCccceecC-C-Cceee--ccCCCeEEcccccchhcccccccccccCcceEeeeeEECCe Confidence 99876 69999987654322 1 11223 23457999865321 12469999999988543No 39>1h30_A GAS6, growth-arrest-specific protein; laminin G-domain protein, vitamin K-dependent protein, AXL/SKY/MER ligand, laminin G- like domain; 2.2A {Homo sapiens} SCOP: b.29.1.4 b.29.1.4 PDB: 2c5d_A* 4ra0_A* Probab=97.43 E-value=0.00062 Score=79.18 Aligned_cols=127 Identities=16% Similarity=0.224 Sum_probs=80.7 Q ss_pred ceEEEEEEeecCCCCceEEEEEeCCCCeEEEEEEEcccc-cCce---EEEEEEEeccCCcceeEEEeeeccCCCCceEEE Q FBpp0301686 87 EFAILITFRQSSLKGGYLFSVVNPLDTVVQLGVHLSPVV-KNSY---NVSLVYTQADQNIGRKLASFGVAHVPDKWNSIA 162 (1039) Q Consensus 87 eFSllaT~R~~~~~~g~LfsI~~~~d~~~qlgL~lsg~~-~~~~---~i~L~Y~~~~~~~~q~~~sF~v~laDg~WHrla 162 (1039) +|+|.+.||... ..|+||.+.+..+...+|.|.|..-. ...+ .|.|.+. .+ ........+.||+||+|. T Consensus 250 ~~~is~~frT~~-~~GlLl~~~~~~~~~d~l~l~L~~g~~~g~l~~~~v~~~~~--~~----~~~~~~~~l~DG~WH~V~ 322 (422) T 1h30_A 250 EVEVVAHIRPAA-DTGVLFALWAPDLRAVPLSVALVDYHSTKKLKKQLVVLAVE--HT----ALALMEIKVCDGQEHVVT 322 (422) T ss_dssp CEEEEEEEEESS-SCEEEEEEEEGGGTEEEEEEEEESCC-----CCCEEEEEET--TE----EEEEEECCTTSSCCEEEE T ss_pred eeEEEEEEEeCC-CCEEEEEEeccCCCcCceEEEEeeccccccccccEEEEEEC--Ce----EEEEeeeeecCCCEEEEE Confidence 899999999774 45799988864344678888775321 0001 2556552 21 122346778899999999 Q ss_pred EEEeCCeEEEEEccccceeeeccCCCc----ce--eccCCeeEEEEecCcc------cCcccccceeeeEE Q FBpp0301686 163 LQVLSDKVSFYYDCELRNTTLVTREPI----EL--VFDSASTLYIGQAGSI------IGGKFEGYLEKINV 221 (1039) Q Consensus 163 LsV~g~~VtLyVDC~~~~t~~l~r~~~----~l--~~~~~~~l~IGq~g~~------~~~~F~G~LQ~L~i 221 (1039) |.+.+..++|+||.....+........ .+ .+.....||||..... ....|+|=|+ |+| T Consensus 323 l~~~~~~~~L~VD~~~~~~~~~~~~~~~~~~~l~~~l~~~~~lylGG~p~~~~~~~~~~~~F~GCi~-v~i 392 (422) T 1h30_A 323 VSLRDGEATLEVDGTRGQSEVSAAQLQERLAVLERHLRSPVLTFAGGLPDVPVTSAPVTAFYRGCMT-LEV 392 (422) T ss_dssp EEEETTEEEEEETTEECEESSCHHHHHHHHHHHHHHHTSCCEEEESCCCSCCTTSSSCCSBCCEEEE-EEE T ss_pred EEEECCEEEEEeCCccceeeccccchhhhhhhhhHhhccCccEEEcCcCCCcccccccCCCceEEEE-EEE Confidence 999999999999998765432211000 01 2345678999865211 1245899994 765No 40>3v0a_B NTNH; botulinum neurotoxin, toxin, neurotoxin associated protein, progenitor toxin complex, VHH bound interlocked complex; HET: MES; 2.70A {Clostridium botulinum} PDB: 3v0b_B Probab=97.36 E-value=0.0026 Score=79.96 Aligned_cols=155 Identities=12% Similarity=0.172 Sum_probs=91.4 Q ss_pred CcEEEccCCCCCcceEEcCCcc-ccCcccccCCCCCc-ceEEEEEEeec-CCCCc-eEEEEEeCCCCeEEEEEEEccccc Q FBpp0301686 51 AGIEFGEAEDGFPAFRFLQTAD-VKSPYRMLLPEKLY-EFAILITFRQS-SLKGG-YLFSVVNPLDTVVQLGVHLSPVVK 126 (1039) Q Consensus 51 ~GV~~v~G~d~~pAy~f~~~a~-l~~pt~~~fp~~~~-eFSllaT~R~~-~~~~g-~LfsI~~~~d~~~qlgL~lsg~~~ 126 (1039) .+++++.|..+ .|+.|..... +..|...++ .... +|||.+|+|+. ..+.+ .+|+-.+. ..- +.|.+... T Consensus 867 G~~sfvdGv~G-kAL~FDGSs~yV~LPn~li~-nS~tdsFTVSFWVK~lge~Ta~ttIISs~dn--nsG-WeIsL~nn-- 939 (1196) T 3v0a_B 867 KDIGLVYGINS-DALYLNGSNQSISFSNDFFE-NGLTNSFSIYFWLRNLGKDTIKSKLIGSKED--NCG-WEIYFQDT-- 939 (1196) T ss_dssp TTCEEEECSSS-EEEEECSSSCCEEEECGGGG-CCSSCCEEEEEEEEECCCCCSCEEEEEEEET--TEE-EEEEEETT-- T ss_pred CCceecCCCcC-ceEEEcCCccEEECCCcccc-cCCCCcEEEEEEeccCCccCccceEEecCCC--CCC-ceEEEcCC-- Confidence 35778777555 5899986443 444443332 1234 89999999994 22211 26643332 111 33444332 Q ss_pred CceEEEEEEEeccCCcceeEEEeeeccCCCCceEEEEEEe--CCeEEEEEccccceeeeccCCCcceeccCCeeEE-EEe Q FBpp0301686 127 NSYNVSLVYTQADQNIGRKLASFGVAHVPDKWNSIALQVL--SDKVSFYYDCELRNTTLVTREPIELVFDSASTLY-IGQ 203 (1039) Q Consensus 127 ~~~~i~L~Y~~~~~~~~q~~~sF~v~laDg~WHrlaLsV~--g~~VtLyVDC~~~~t~~l~r~~~~l~~~~~~~l~-IGq 203 (1039) .+.+...+..+. .+.+.|. .+..++||||++.+. +..++||||.+++.+..+.... .+ ..+..+. +|. T Consensus 940 ---~L~Ws~~DsnGn--~ksI~~D-dI~~GkW~HVAITyDrsG~aVKLYINGeLVas~sisgll-dI--~ssg~IsFIG~ 1010 (1196) T 3v0a_B 940 ---GLVFNMIDSNGN--EKNIYLS-DVSNNSWHYITISVDRLKEQLLIFIDDNLVANESIKEIL-NI--YSSNIISLLSE 1010 (1196) T ss_dssp ---EEEEEEECTTCC--EEEEEEC-SCCSSSCEEEEEEEETTTTEEEEEETTEEEEEEECTTCC-CC--CCCSEEEECCT T ss_pred ---ceEEEEEeCCCc--cceeecc-CCCCCCeEEEEEEEeCCCCEEEEeECCEEccccccccCc-cc--ccCCceeEecc Confidence 344444433322 1334443 556899999999998 4567999999998876544322 12 1233343 332 Q ss_pred cCcccCcccccceeeeEEeeCcccc Q FBpp0301686 204 AGSIIGGKFEGYLEKINVYGNPDAI 228 (1039) Q Consensus 204 ~g~~~~~~F~G~LQ~L~i~~dp~~~ 228 (1039) .|.|.|.+|||+..+..+ T Consensus 1011 -------nFnG~IDEVRIYNRALSa 1028 (1196) T 3v0a_B 1011 -------NNPSYIEGLTILNKPTTS 1028 (1196) T ss_dssp -------TCCEEEEEEEEESSCCCH T ss_pred -------cCCcEeeeEEEECCcCCH Confidence 199999999999886544No 41>3rsj_A BONT/F; clostridium botulinum type F, ganglioside binding site, GD1A; HET: NGA GAL SIA; 2.00A {Clostridium botulinum} SCOP: b.29.1.0 b.42.4.0 PDB: 3fuq_A Probab=97.28 E-value=0.011 Score=66.95 Aligned_cols=165 Identities=8% Similarity=0.110 Sum_probs=104.5 Q ss_pred CCcEEEccCCCCCcceEEcCCcc----ccCcccccCCCCCc-ceEEEEEEeecCC-C------CceEEEEEeCCCCeEEE Q FBpp0301686 50 FAGIEFGEAEDGFPAFRFLQTAD----VKSPYRMLLPEKLY-EFAILITFRQSSL-K------GGYLFSVVNPLDTVVQL 117 (1039) Q Consensus 50 ~~GV~~v~G~d~~pAy~f~~~a~----l~~pt~~~fp~~~~-eFSllaT~R~~~~-~------~g~LfsI~~~~d~~~ql 117 (1039) ...|.++.| -.-||.|..... +.+ +..++-+.+. +|||.+|+|.... + .-+||.-.+. ++. -. T Consensus 29 ~g~v~lv~g--~~~a~~L~~s~~s~i~I~~-~ndii~n~~~~nFSIsFWvri~k~~t~~n~~~e~tII~~~~~-nNs-GW 103 (413) T 3rsj_A 29 NGDVYIYST--NRNQFGIYSSKPSEVNIAQ-NNDIIYNGRYQNFSISFWVRIPKYFNKVNLNNEYTIIDCIRN-NNS-GW 103 (413) T ss_dssp EECCEECSS--CTTEEEEESSSSEEEEEEC-CTTTCCCCSSCCEEEEEEEECCCCCSGGGTTCCEEEEEEEET-TTE-EE T ss_pred CCceEEEec--CCcEEEEccCCCcceEEec-CcceeeccccCcEEEEEEEEcCCcccccccCCcceEEEeeec-CCC-Cc Confidence 356888888 346677765444 333 4455556677 9999999997544 2 3568877753 333 22 Q ss_pred EEEEcccccCceEEEEEEEeccCCcceeEEEeee----ccC--CCCceEEEEEEe-CCeEEEEEccccceeeeccCCCcc Q FBpp0301686 118 GVHLSPVVKNSYNVSLVYTQADQNIGRKLASFGV----AHV--PDKWNSIALQVL-SDKVSFYYDCELRNTTLVTREPIE 190 (1039) Q Consensus 118 gL~lsg~~~~~~~i~L~Y~~~~~~~~q~~~sF~v----~la--Dg~WHrlaLsV~-g~~VtLyVDC~~~~t~~l~r~~~~ 190 (1039) .|.+... .+.+-..+..+ .++.+.|.. .+. -++||+|+++|. -....+|+|.+++....+.-.. T Consensus 104 ~Isl~~n-----~liWtl~Ds~g--~~k~i~f~y~~~~~i~dyiNkW~~VtIt~dRlg~a~IYINGkLi~~~~I~~l~-- 174 (413) T 3rsj_A 104 KISLNYN-----KIIWTLQDTAG--NNQKLVFNYTQMISISDYINKWIFVTITNNRLGNSRIYINGNLIDEKSISNLG-- 174 (413) T ss_dssp EEEEETT-----EEEEEEECTTS--CEEEEEEECCSBSSSCSSTTSEEEEEEEECTTSEEEEEETTEEEEEEECTTCC-- T ss_pred EEEECCC-----eEEEEEEcCCC--cceeEEEecccccchhhccCceEEEEEEEcCCCceEEEECCEEeeccChhhhc-- Confidence 2333332 34444443333 335666642 222 389999999999 6788999999999988655322 Q ss_pred eeccCCeeEEEEecCcccCcccccceeeeEEeeCccccccc Q FBpp0301686 191 LVFDSASTLYIGQAGSIIGGKFEGYLEKINVYGNPDAINVT 231 (1039) Q Consensus 191 l~~~~~~~l~IGq~g~~~~~~F~G~LQ~L~i~~dp~~~~~~ 231 (1039) ++..+..+.++--+. ...+| +.|.+|+|+..+....+. T Consensus 175 -~I~ss~~I~~~vd~~-~d~~~-~~Id~l~If~k~Lt~~EI 212 (413) T 3rsj_A 175 -DIHVSDNILFKIVGC-NDTRY-VGIRYFKVFDTELGKTEI 212 (413) T ss_dssp -CCCCCSEEEEEEESC-CSSCE-EEEEEEEEESSCCCHHHH T ss_pred -ceeecCeEEEEeccc-CCCce-EEEeeEEEecccCCHHHH Confidence 233455666664322 33477 999999999988655443No 42>3pme_A Type C neurotoxin; structural genomics, seattle structural genomics center for infectious disease, ssgcid, botulinum neurotoxin; 1.56A {Clostridium botulinum} SCOP: b.29.1.0 b.42.4.0 PDB: 4f83_A* 3ogg_A 3n7j_A 3obr_A 3obt_A* 3rmx_A 3rmy_A Probab=97.25 E-value=0.0043 Score=70.87 Aligned_cols=168 Identities=14% Similarity=0.185 Sum_probs=102.2 Q ss_pred CCcEEEccCCCCCcceEEcCCcc---ccCcccccCCCCCc-ceEEEEEEeecCCCC--ceEEEEEeCCCCeEEEEEEEcc Q FBpp0301686 50 FAGIEFGEAEDGFPAFRFLQTAD---VKSPYRMLLPEKLY-EFAILITFRQSSLKG--GYLFSVVNPLDTVVQLGVHLSP 123 (1039) Q Consensus 50 ~~GV~~v~G~d~~pAy~f~~~a~---l~~pt~~~fp~~~~-eFSllaT~R~~~~~~--g~LfsI~~~~d~~~qlgL~lsg 123 (1039) .-.|+++.| ...||.|..... +. -+..++-+.++ +|||.+|+|..+.+. --.++|.+......-..|.+.. T Consensus 30 ~G~v~~~~G--~g~A~~L~gs~~~~~i~-~~ndii~n~~~nsFSIsFWvr~~k~~t~~~~~~tIin~k~~nsGW~Isl~~ 106 (420) T 3pme_A 30 EGDVQVNTI--YTNDFKLSSSGDKIIVN-LNNNILYSAIYENSSVSFWIKISKDLTNSHNEYTIINSIKQNSGWKLCIRN 106 (420) T ss_dssp ESCCEESSS--STTEEEECSTTCEEEEE-CCGGGGSSGGGTEEEEEEEEEECHHHHTCCSEEEEEEEEETTEEEEEEEET T ss_pred CCceEEEec--CCcEEEecCCCccEEEe-cCcchhhccccCceEEEEEEECCCccccCCCceEeEeeccCCCCeEEEECC Confidence 345788888 467888876655 33 34445556677 999999999754411 2234444332223334444443 Q ss_pred cccCceEEEEEEEeccCCcceeEEEeee----ccC--CCCceEEEEEEe-CCeEEEEEccccceeeeccCCCcceeccCC Q FBpp0301686 124 VVKNSYNVSLVYTQADQNIGRKLASFGV----AHV--PDKWNSIALQVL-SDKVSFYYDCELRNTTLVTREPIELVFDSA 196 (1039) Q Consensus 124 ~~~~~~~i~L~Y~~~~~~~~q~~~sF~v----~la--Dg~WHrlaLsV~-g~~VtLyVDC~~~~t~~l~r~~~~l~~~~~ 196 (1039) . .+.+-.. +.....+...|.. .+. .++||+|+++|. -..+++|+|.+++.+..+.-. .. +..+ T Consensus 107 n-----~liw~l~--dsngn~~~i~f~y~~~~~I~d~~nkW~~VtIs~Drlg~~~IYING~lv~sk~I~~l-g~--I~~s 176 (420) T 3pme_A 107 G-----NIEWILQ--DINRKYKSLIFDYSESLSHTGYTNKWFFVTITNNIMGYMKLYINGELKQSERIEDL-DE--VKLD 176 (420) T ss_dssp T-----EEEEEEE--CTTSCEEEEEEECSTTTCTTSCTTSCEEEEEEEETTSEEEEEETTEEEEEEECTTS-CC--CCCC T ss_pred C-----eEEEEEE--ecCCceeeEEEecccccccccccCceEEEEEEECCCCCEEEEECCEEeeecchhhc-cc--cccC Confidence 3 3333333 3222335556642 222 389999999999 567899999999998866532 12 2223 Q ss_pred eeEEEEecCcccCcccccceeeeEEeeCccccccc Q FBpp0301686 197 STLYIGQAGSIIGGKFEGYLEKINVYGNPDAINVT 231 (1039) Q Consensus 197 ~~l~IGq~g~~~~~~F~G~LQ~L~i~~dp~~~~~~ 231 (1039) ..+-++-.+ .....+++.|.+|+|+..+-...+. T Consensus 177 n~i~l~v~~-~~d~~~~~~Id~f~Ifnk~Lt~~EI 210 (420) T 3pme_A 177 KTIVFGIDE-NIDENQMLWIRDFNIFSKELSNEDI 210 (420) T ss_dssp SEEEESCCS-CCCTTCCEEEEEEEEESSCCCHHHH T ss_pred CeEEEEEcc-cCCCccceeeeeEEEecccCCHHHH Confidence 344444422 2345689999999999988655443No 43>3n7l_A Neurotoxin; HCR/D-SA, ganglioside binding loop; 2.00A {Clostridium botulinum} SCOP: b.29.1.0 b.42.4.0 PDB: 3azw_A 3azv_A 4isr_A 4isq_A 3n7m_A 4fvv_A* 3n7k_A 3r4s_A* 3r4u_A Probab=97.21 E-value=0.0015 Score=75.92 Aligned_cols=164 Identities=13% Similarity=0.187 Sum_probs=91.3 Q ss_pred CcEEEccCCCCCcceEEcCCcc------ccCcccccCCCCCc-ceEEEEEEeecC---C-CCceEEEEEeCCCCeEEEEE Q FBpp0301686 51 AGIEFGEAEDGFPAFRFLQTAD------VKSPYRMLLPEKLY-EFAILITFRQSS---L-KGGYLFSVVNPLDTVVQLGV 119 (1039) Q Consensus 51 ~GV~~v~G~d~~pAy~f~~~a~------l~~pt~~~fp~~~~-eFSllaT~R~~~---~-~~g~LfsI~~~~d~~~qlgL 119 (1039) ..|+++.| ...|+.|..... |..|.. ++-+.+. +|||.+|+|+.. . ....||+..+. + .-+.+ T Consensus 32 g~v~~~~G--~g~Al~l~g~~~~~s~v~V~lPn~-li~n~~~~~FTVSfWVK~~~~~t~~~~~~If~~~~~--~-sGW~I 105 (424) T 3n7l_A 32 GNVQLNPI--FPFDFKLGSSGDDRGKVIVTQNEN-IVYNAMYESFSISFWIRINKWVSNLPGYTIIDSVKN--N-SGWSI 105 (424) T ss_dssp SBCEECSS--TTCCEEEESCSTTBCEEEEECCHH-HHHTTTTTEEEEEEEEEEETCCTTCCCEEEEEEESS--S-CEEEE T ss_pred CceEEecC--CCcEEEEccCCCccceEEEECChH-HhcccCCCcEEEEEEeccccccCCCCccEEEeccCC--C-CCeEE Confidence 45888888 456888875432 333332 2223345 899999999866 2 23557776642 2 22344 Q ss_pred EEcccccCceEEEEEEEeccCCcceeEEEee------eccCCCCceEEEEEEe-CCeEEEEEccccceeeeccCCCccee Q FBpp0301686 120 HLSPVVKNSYNVSLVYTQADQNIGRKLASFG------VAHVPDKWNSIALQVL-SDKVSFYYDCELRNTTLVTREPIELV 192 (1039) Q Consensus 120 ~lsg~~~~~~~i~L~Y~~~~~~~~q~~~sF~------v~laDg~WHrlaLsV~-g~~VtLyVDC~~~~t~~l~r~~~~l~ 192 (1039) .+... .+.+...+..+. .+.+.|. +++. ++||||++.+. ...++||||-+++.+..+.... .+. T Consensus 106 ~l~~n-----~l~ws~~d~~G~--~~~iwfdy~~~~~~~l~-n~W~HVAvTyD~~g~~kiYINGelv~s~~i~~~~-~i~ 176 (424) T 3n7l_A 106 GIISN-----FLVFTLKQNENS--EQDINFSYDISKNAAGY-NKWFFVTITTNMMGNMMIYINGKLIDTIKVKELT-GIN 176 (424) T ss_dssp EEETT-----EEEEEEEEETTE--EEEEEEECCGGGCTTCC-CSCEEEEEEEETTSEEEEEETTEEEEEEECCCCT-TCC T ss_pred EeCCC-----ceEEEEecCCCc--cceeeecccccccCCCC-CceEEEEEEECCCCCEEEEECCEEeeeeeecccc-ccc Confidence 44322 334443332221 1222232 3444 99999999999 6788999999998775432110 111 Q ss_pred ccCCeeEE------EEecCcccCcccccceeeeEEeeCcccccc Q FBpp0301686 193 FDSASTLY------IGQAGSIIGGKFEGYLEKINVYGNPDAINV 230 (1039) Q Consensus 193 ~~~~~~l~------IGq~g~~~~~~F~G~LQ~L~i~~dp~~~~~ 230 (1039) +...-.+. ||+.- ..+..|.|.|.+|||+..+..+++ T Consensus 177 ~~~~i~~~~g~~~~iG~~~-~~d~~f~G~IDE~RIynrALTaeE 219 (424) T 3n7l_A 177 FSKTITFQMNKIPNTGLIT-SDSDNINMWIRDFYIFAKELDDKD 219 (424) T ss_dssp CCSEEEEEEEECTTSCCCC-----CCEEEEEEEEEESSCCCHHH T ss_pred cCceeeeccCcceeecccc-cCCCCCcEEEeEEEEECCcCCHHH Confidence 11111112 22221 013468999999999998755533No 44>2wjs_A Laminin subunit alpha-2; integrin, secreted, coiled coil, glycoprotein, laminin EGF-like domain, extracellular matrix, laminin G-like domain; HET: NAG; 2.80A {Mus musculus} Probab=97.11 E-value=0.005 Score=75.12 Aligned_cols=126 Identities=17% Similarity=0.276 Sum_probs=82.0 Q ss_pred ceEEEEEEeecCCCCceEEEEEeCCCCeEEEEEEEcccccCceEEEEEEEeccCCcceeEEEeeeccCCCCceEEEEEEe Q FBpp0301686 87 EFAILITFRQSSLKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLASFGVAHVPDKWNSIALQVL 166 (1039) Q Consensus 87 eFSllaT~R~~~~~~g~LfsI~~~~d~~~qlgL~lsg~~~~~~~i~L~Y~~~~~~~~q~~~sF~v~laDg~WHrlaLsV~ 166 (1039) .++|.+.||... ..+.||...+. +...+|.|+|..- .|.|.|.-..+. ..+.-...+.|++||+|.|... T Consensus 226 ~~~isl~FrT~~-~~GlLl~~~~~-~~~d~l~L~L~~G-----~l~~~~~~g~~~---~~l~~~~~lnDg~WH~V~v~~~ 295 (608) T 2wjs_A 226 ISTVMFKFRTFS-SSALLMYLATR-DLKDFMSVELSDG-----HVKVSYDLGSGM---TSVVSNQNHNDGKWKAFTLSRI 295 (608) T ss_dssp EEEEEEEEEESC-SEEEEEEEECT-TSSSEEEEEEETT-----EEEEEEECSSCE---EEEEEEEECCSSSCEEEEEEEE T ss_pred cceEEEEEEeCC-CCeEEEEecCC-CCCceEEEEEECC-----EEEEEEECCCCc---eEeecCccccCCCeEEEEEEEc Confidence 577778888654 56788887764 4567888888654 477777543322 1223355778999999999999 Q ss_pred CCeEEEEE-cccccee--e--eccCCCcceeccCCeeEEEEecCc-------ccCcccccceeeeEEe Q FBpp0301686 167 SDKVSFYY-DCELRNT--T--LVTREPIELVFDSASTLYIGQAGS-------IIGGKFEGYLEKINVY 222 (1039) Q Consensus 167 g~~VtLyV-DC~~~~t--~--~l~r~~~~l~~~~~~~l~IGq~g~-------~~~~~F~G~LQ~L~i~ 222 (1039) +..++|.| ||..... . ..+.....+++.....||||-... .....|.|=|++|+|- T Consensus 296 ~~~~~l~vdd~~~~~~~~~~~~~~g~~~~l~l~~~~~lylGG~p~~~~~~~~~~~~~F~GCi~~v~in 363 (608) T 2wjs_A 296 QKQANISIVDIDSNQEENVATSSSGNNFGLDLKADDKIYFGGLPTLRNLRPEVNVKKYSGCLKDIEIS 363 (608) T ss_dssp TTEEEEEEEETTTCCEEEEEEECCSSCCCCCCCTTCEEEESCCCCCSCCCTTCCCCCCEEEEEEEEET T ss_pred ccEEEEEEEeccCCcccccccccCCcccccccCCCceEEEcCcccccccCccccccCcCccccccEEC Confidence 99999998 6653221 1 111112234444467899985421 1124699999999884No 45>1epw_A Bontoxilysin B, botulinum neurotoxin type B; zinc, metalloprotease, transmembrane, hydrolase; 1.90A {Clostridium botulinum} SCOP: b.29.1.6 b.42.4.2 d.92.1.7 h.4.2.1 PDB: 1f31_A* 1g9a_A* 1g9b_A* 1g9c_A* 1g9d_A* 1i1e_A* 1s0b_A 1s0c_A 1s0d_A 1s0e_A 1s0f_A 1s0g_A 2np0_A 3zuq_A 2etf_A 2xhl_A 1z0h_A 4kbb_A* 2nm1_A 1f82_A ... Probab=96.97 E-value=0.019 Score=73.28 Aligned_cols=153 Identities=9% Similarity=0.190 Sum_probs=91.5 Q ss_pred CCcceEEcCCcc----ccCcccccCCCCCc-ceEEEEEEeecCC-CC---------ceEEEEEeCCCCeEEEEEEEcccc Q FBpp0301686 61 GFPAFRFLQTAD----VKSPYRMLLPEKLY-EFAILITFRQSSL-KG---------GYLFSVVNPLDTVVQLGVHLSPVV 125 (1039) Q Consensus 61 ~~pAy~f~~~a~----l~~pt~~~fp~~~~-eFSllaT~R~~~~-~~---------g~LfsI~~~~d~~~qlgL~lsg~~ 125 (1039) ...|+.|..... +..+...++ +... +|||.+|+|+... .. ..+|+-.+. ...-++. +... T Consensus 894 ~GkAl~FdGssgS~I~V~LPnnli~-ns~~d~FTISFWVK~~s~~t~~i~~f~~ne~tfIs~~~n-nsGW~IS--Ledn- 968 (1290) T 1epw_A 894 DKNQFKLTSSANSKIRVTQNQNIIF-NSVFLDFSVSFWIRIPKYKNDGIQNYIHNEYTIINCMKN-NSGWKIS--IRGN- 968 (1290) T ss_dssp TTSEEEECSSTTCCEEEECCTTSSC-CCSSCCEEEEEEEECCCCCGGGHHHHHHCEEEEEEEEET-TEEEEEE--EETT- T ss_pred cCceEEecCCCCcceEEEcCccccc-CCCCCCEEEEEEeccccccCccccccccccceEEecccC-CCCceEE--ecCC- Confidence 457888876433 333332221 1234 8999999999775 22 345544432 1222333 3221 Q ss_pred cCceEEEEEEEeccCCcceeEEEee----eccC--CCCceEEEEEEeCCeEEEEEccccceeeeccCCCcceeccCCeeE Q FBpp0301686 126 KNSYNVSLVYTQADQNIGRKLASFG----VAHV--PDKWNSIALQVLSDKVSFYYDCELRNTTLVTREPIELVFDSASTL 199 (1039) Q Consensus 126 ~~~~~i~L~Y~~~~~~~~q~~~sF~----v~la--Dg~WHrlaLsV~g~~VtLyVDC~~~~t~~l~r~~~~l~~~~~~~l 199 (1039) ++.+...+..+. ...+.|. ..+. .++||||++++.+..+++|||.+++.+..+.... .+ .....+ T Consensus 969 ----tL~wsl~DsnGn--~~~Iwfd~~t~~~Ipdy~NkW~HVAITyD~g~vKIYINGeLVas~sitgL~-dI--~ss~~I 1039 (1290) T 1epw_A 969 ----RIIWTLIDINGK--TKSVFFEYNIREDISEYINRWFFVTITNNLNNAKIYINGKLESNTDIKDIR-EV--IANGEI 1039 (1290) T ss_dssp ----EEEEEEECTTCC--EEEEEEECCSSCSSCSSTTSCEEEEEEECSSEEEEEETTEEEEEEECSSCC-CC--CCCSEE T ss_pred ----eEEEEEecCCCC--cceeEEecccccCCCCCCCceEEEEEEEcCCeEEEEECCEEeeccccccCc-cc--cccCee Confidence 344444432221 1223333 2222 4999999999999999999999998876543322 22 234578 Q ss_pred EEEecCcccCcccccceeeeEEeeCcccc Q FBpp0301686 200 YIGQAGSIIGGKFEGYLEKINVYGNPDAI 228 (1039) Q Consensus 200 ~IGq~g~~~~~~F~G~LQ~L~i~~dp~~~ 228 (1039) .+|..+. ....|.|.|.+|||+..+..+ T Consensus 1040 ~LGv~n~-~D~~F~G~IDEfRIYNRALSa 1067 (1290) T 1epw_A 1040 IFKLDGD-IDRTQFIWMKYFSIFNTELSQ 1067 (1290) T ss_dssp EEEEEES-CCTTCCEEEEEEEEESSCCCH T ss_pred EEEecCC-CCcCcceEeeeEEEECCcCCH Confidence 8887543 335689999999999987544No 46>2nyy_A Botulinum neurotoxin type A; botulinum, neurotoxin, FAB, protein antibody complex, toxin- system complex; 2.61A {Clostridium botulinum} SCOP: b.29.1.6 b.42.4.2 d.92.1.7 h.4.2.1 PDB: 2nz9_A 3bta_A 3v0a_A* 3v0b_A 3v0c_A 3zus_A 3zur_A Probab=96.92 E-value=0.023 Score=71.54 Aligned_cols=168 Identities=9% Similarity=0.141 Sum_probs=102.5 Q ss_pred CCcEEEccCCCCCcceEEcCCcc----ccCcccccCCCCCc-ceEEEEEEeecCCCC----ceEEEEEeCCCCeEEEEEE Q FBpp0301686 50 FAGIEFGEAEDGFPAFRFLQTAD----VKSPYRMLLPEKLY-EFAILITFRQSSLKG----GYLFSVVNPLDTVVQLGVH 120 (1039) Q Consensus 50 ~~GV~~v~G~d~~pAy~f~~~a~----l~~pt~~~fp~~~~-eFSllaT~R~~~~~~----g~LfsI~~~~d~~~qlgL~ 120 (1039) ...|+++.| ...||.|..... +. -...++-+.++ +|||.+|+|..+.+. --.++|.+......-+.+. T Consensus 900 ~G~V~~v~G--ngnA~~L~gs~~S~~~I~-~~ndii~n~~~~nFSISFWvRipk~~~~~n~~~eyTIIn~k~nNsGW~I~ 976 (1295) T 2nyy_A 900 GSKVNFDPI--DKNQIQLFNLESSKIEVI-LKNAIVYNSMYENFSTSFWIRIPKYFNSISLNNEYTIINCMENNSGWKVS 976 (1295) T ss_dssp CTTEEECTT--CTTCEEEESSTTSCEEEE-ECGGGCCTTTTSEEEEEEEEECCCCCSGGGGGCCEEEEEEEETTEEEEEE T ss_pred CCceEEEec--CCcEEEecCCCCcceEEe-cCcchhcccccCceEEEEEEEcCCCCcccccCCceeeEeeccCCCCeEEE Confidence 456788888 457788765333 33 34555666788 999999999866553 1234444332223334444 Q ss_pred EcccccCceEEEEEEEeccCCcceeEEEeeecc------CCCCceEEEEEEe-CCeEEEEEccccceeeeccCCCcceec Q FBpp0301686 121 LSPVVKNSYNVSLVYTQADQNIGRKLASFGVAH------VPDKWNSIALQVL-SDKVSFYYDCELRNTTLVTREPIELVF 193 (1039) Q Consensus 121 lsg~~~~~~~i~L~Y~~~~~~~~q~~~sF~v~l------aDg~WHrlaLsV~-g~~VtLyVDC~~~~t~~l~r~~~~l~~ 193 (1039) +... .+.+-.. +.....+...|.+.+ ..++||+|+++|. -...++|+|.+++.+..+.-. ..+ T Consensus 977 L~~n-----~liWtl~--DsNgn~k~i~f~y~~~~~I~dyiNkW~hVTIt~DRlg~a~IYINGkLv~sk~I~~L-g~I-- 1046 (1295) T 2nyy_A 977 LNYG-----EIIWTLQ--DTQEIKQRVVFKYSQMINISDYINRWIFVTITNNRLNNSKIYINGRLIDQKPISNL-GNI-- 1046 (1295) T ss_dssp EETT-----EEEEEEE--CSSSCEEEEEEECCSBSSSCSSTTSCEEEEEEEETTSEEEEEETTEEEEEEECTTC-CCC-- T ss_pred eCCC-----cEEEEEE--ecCCcceeeEEecccccCcccccCceEEEEEEECCCCCeEEEECCEEeeccccccC-Cce-- Confidence 4433 2333333 322233455554211 1389999999999 467799999999999866543 223 Q ss_pred cCCeeEEEEecCcccCcccccceeeeEEeeCccccccc Q FBpp0301686 194 DSASTLYIGQAGSIIGGKFEGYLEKINVYGNPDAINVT 231 (1039) Q Consensus 194 ~~~~~l~IGq~g~~~~~~F~G~LQ~L~i~~dp~~~~~~ 231 (1039) ..+..+.++--+ +....|.+.|.+|+|+..+-...+. T Consensus 1047 ~ssn~Is~gv~g-~~d~n~~g~ID~F~IfnK~Lt~~EI 1083 (1295) T 2nyy_A 1047 HASNNIMFKLDG-CRDTHRYIWIKYFNLFDKELNEKEI 1083 (1295) T ss_dssp CCCSEEEEEEES-CCCTTCEEEEEEEEEESSCCCHHHH T ss_pred eecCeEEEEEec-cCCCCceeeEeeEEEecCcCCHHHH Confidence 224444444222 2446799999999999988555433No 47>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A* Probab=96.90 E-value=0.0075 Score=79.77 Aligned_cols=122 Identities=15% Similarity=0.144 Sum_probs=82.0 Q ss_pred EEEEEEeecCCCCceEEEEEeCCCCeEEEEEEEcccccCceEEEEEEEeccCCcceeEEEe-eeccCCCCceEEEEEEeC Q FBpp0301686 89 AILITFRQSSLKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLASF-GVAHVPDKWNSIALQVLS 167 (1039) Q Consensus 89 SllaT~R~~~~~~g~LfsI~~~~d~~~qlgL~lsg~~~~~~~i~L~Y~~~~~~~~q~~~sF-~v~laDg~WHrlaLsV~g 167 (1039) .|.+.||. +...++||.+.+......+|.|.|..- .|.|.|..... ...+.+ ...+.||+||+|.|.-.+ T Consensus 1084 ~i~l~frT-~~~~g~Ll~~~s~~~~~~~l~l~l~~G-----~l~~~~~~g~~---~~~~~~~~~~v~DG~wH~v~~~r~~ 1154 (1245) T 3qcw_A 1084 RLAIGFST-VQKEAVLVRVDSSSGLGDYLELHIHQG-----KIGVKFNVGTD---DIAIEESNAIINDGKYHVVRFTRSG 1154 (1245) T ss_dssp EEEEEEEB-CCSSEEEEEEEECTTCCCEEEEEEETT-----EEEEEEESSSC---CEEEECCSCCCBSSSCEEEEEEEET T ss_pred eEEEEEEE-ecCCeEEEEEeccCCCCceEEEEEECC-----EEEEEEECCCC---ceEeecCceEcCCCcEEEEEEEEcC Confidence 45556664 466789999877533356888888642 57777864322 123333 457889999999999999 Q ss_pred CeEEEEEccccceeeeccCCCcceeccCCeeEEEEecCcccCcccccceeeeEEe Q FBpp0301686 168 DKVSFYYDCELRNTTLVTREPIELVFDSASTLYIGQAGSIIGGKFEGYLEKINVY 222 (1039) Q Consensus 168 ~~VtLyVDC~~~~t~~l~r~~~~l~~~~~~~l~IGq~g~~~~~~F~G~LQ~L~i~ 222 (1039) ..++|+||-..+.+. +........+.....||||... ....|+|-|+.|+|- T Consensus 1155 ~~~~l~VD~~~~~~~-~~~g~~~~~~~~~~~l~lGg~~--~~~~F~Gcl~~v~~n 1206 (1245) T 3qcw_A 1155 GNATLQVDSWPVIER-YPAGRQLTIFNSQATIIIGGKE--QGQPFQGQLSGLYYN 1206 (1245) T ss_dssp TEEEEEETTSCCEEE-CCCSCCCCCBCSEEEEEESSTT--TTCCCCEEEEEEEET T ss_pred CEEEEEECCccceee-cCCCcceEEeecCCeEEECCcc--CCCCceEEEeEEEEC Confidence 999999999765442 2211111123456789998652 346799999999873No 48>2vxr_A Botulinum neurotoxin type G; hydrolase, ganglioside, protease, recepto secreted, binding domain, metalloprotease; 1.90A {Clostridium botulinum} SCOP: b.29.1.0 b.42.4.0 PDB: 3mpp_G Probab=96.80 E-value=0.023 Score=65.07 Aligned_cols=166 Identities=11% Similarity=0.193 Sum_probs=101.0 Q ss_pred CCcEEEccCCCCCcceEEcCCcc--c-cCcccccCCCCCc-ceEEEEEEeecCC-CC---------ceEEEEEeCCCCeE Q FBpp0301686 50 FAGIEFGEAEDGFPAFRFLQTAD--V-KSPYRMLLPEKLY-EFAILITFRQSSL-KG---------GYLFSVVNPLDTVV 115 (1039) Q Consensus 50 ~~GV~~v~G~d~~pAy~f~~~a~--l-~~pt~~~fp~~~~-eFSllaT~R~~~~-~~---------g~LfsI~~~~d~~~ 115 (1039) ...|.++. - ..-||.|..... + -.....++-+.++ +|||.+|+|.... +. -+||.-++. ...- T Consensus 76 ~g~V~lv~-i-n~na~~L~~s~~s~i~I~~~ndiiyN~~~~nFSIsFWvRipk~~t~~tn~y~~nEyTII~~~~n-NsGW 152 (482) T 2vxr_A 76 GSDVIFND-I-GNGQFKLNNSENSNITAHQSKFVVYDSMFDNFSINFWVRTPKYNNNDIQTYLQNEYTIISCIKN-DSGW 152 (482) T ss_dssp CTTCEEEC-S-TTCEEEEESSTTCCEEEECCTTTSCEESSCCEEEEEEEECCCCCGGGHHHHHHCEEEEEEEEET-TEEE T ss_pred CCceEEEE-c-cCcEEEecCCCCcceEEEcccceeeccccCceEEEEEEEcCCcccccccccccCCceEEEeecC-CCCc Confidence 44566665 2 345566654433 1 1223445555677 9999999997544 22 357766642 2222 Q ss_pred EEEEEEcccccCceEEEEEEEeccCCcceeEEEeee----ccC--CCCceEEEEEEe-CCeEEEEEccccceeeeccCCC Q FBpp0301686 116 QLGVHLSPVVKNSYNVSLVYTQADQNIGRKLASFGV----AHV--PDKWNSIALQVL-SDKVSFYYDCELRNTTLVTREP 188 (1039) Q Consensus 116 qlgL~lsg~~~~~~~i~L~Y~~~~~~~~q~~~sF~v----~la--Dg~WHrlaLsV~-g~~VtLyVDC~~~~t~~l~r~~ 188 (1039) .++ +... .+.+-..+..+ .++.+.|.. .+. -++||.|+++|. -....+|||.+++....+.-. T Consensus 153 ~Is--l~~n-----~LIWtl~Ds~g--~~k~I~f~y~~~~nisdyiNkW~fITITndRlGna~IYINGkLi~~~~I~~L- 222 (482) T 2vxr_A 153 KVS--IKGN-----RIIWTLIDVNA--KSKSIFFEYSIKDNISDYINKWFSITITNDRLGNANIYINGSLKKSEKILNL- 222 (482) T ss_dssp EEE--EETT-----EEEEEEECTTS--CEEEEEEECCSCCSSCSSTTSCEEEEEEECTTSEEEEEETTEEEEEEECTTC- T ss_pred EEE--ECCC-----eEEEEEEcCCC--cceeEEEecccccchhhccCceEEEEEEEcCCCceEEEECCEEeeccChhhh- Confidence 333 4433 34444443333 335666742 222 389999999999 678899999999988755432 Q ss_pred cceeccCCeeEEEEecCcccCcccccceeeeEEeeCccccccc Q FBpp0301686 189 IELVFDSASTLYIGQAGSIIGGKFEGYLEKINVYGNPDAINVT 231 (1039) Q Consensus 189 ~~l~~~~~~~l~IGq~g~~~~~~F~G~LQ~L~i~~dp~~~~~~ 231 (1039) +.+..+..+.++--+ .....|.+.|.+|+|+..+...++. T Consensus 223 --~~I~~s~~I~fgvdn-~~D~n~~i~Id~l~If~keLt~~EI 262 (482) T 2vxr_A 223 --DRINSSNDIDFKLIN-CTDTTKFVWIKDFNIFGRELNATEV 262 (482) T ss_dssp --CCEECCSEEEEEEES-CCCTTCEEEEEEEEEESSCCCHHHH T ss_pred --cccccCCeEEEEecc-CCCCCceeEEeeEEEecccCCHHHH Confidence 133345566666422 2445699999999999988655443No 49>2sli_A Intramolecular trans-sialidase; hydrolase, neuraminidase; HET: SKD; 1.80A {Macrobdella decora} SCOP: b.29.1.9 b.68.1.1 PDB: 1sll_A 1sli_A* 3sli_A* 4sli_A* Probab=96.62 E-value=0.027 Score=69.92 Aligned_cols=136 Identities=16% Similarity=0.168 Sum_probs=88.5 Q ss_pred CcceEEEEEEeecC-CCCceEEEEEeCCCC--eEEEEEEEcccccCceEEEEEEEeccCCcceeEEEeeec------cCC Q FBpp0301686 85 LYEFAILITFRQSS-LKGGYLFSVVNPLDT--VVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLASFGVA------HVP 155 (1039) Q Consensus 85 ~~eFSllaT~R~~~-~~~g~LfsI~~~~d~--~~qlgL~lsg~~~~~~~i~L~Y~~~~~~~~q~~~sF~v~------laD 155 (1039) |-+|+|.++||... ++...||++.+...+ ..+|-|.+.... .+.|+....+... ...|..+ +.+ T Consensus 34 l~~~Tv~~~~~~~~~~~~~~Lfs~~~~t~~~~n~~~~l~~~~~g----~~~~~v~~~~~~~---~~~~~~~~~~~~~~~~ 106 (679) T 2sli_A 34 MTQGTIILSYKSTSENGIQSLFSVGNSTAGNQDRHFHIYITNSG----GIGIELRNTDGVF---NYTLDRPASVRALYKG 106 (679) T ss_dssp CSSEEEEEEEEECCCCSEEEEEEEECCSTTCTTEEEEEEEETTS----CEEEEEEECTTTC---EEEEEESSCCCSEETT T ss_pred ccccEEEEEEEECCCCCceEEEEecCCCCCCccccEEEEEeCCC----EEEEEEecCCCce---eEEEecCcccceeccC Confidence 34999999999976 555669999964322 467888886532 4666665443221 2223222 124 Q ss_pred -CCceEEEEEEeC--CeEEEEEccccceeeeccCCCcce-eccCCeeEEEEecCcc--cCcccccceeeeEEeeCcccc Q FBpp0301686 156 -DKWNSIALQVLS--DKVSFYYDCELRNTTLVTREPIEL-VFDSASTLYIGQAGSI--IGGKFEGYLEKINVYGNPDAI 228 (1039) Q Consensus 156 -g~WHrlaLsV~g--~~VtLyVDC~~~~t~~l~r~~~~l-~~~~~~~l~IGq~g~~--~~~~F~G~LQ~L~i~~dp~~~ 228 (1039) ..||+|+++... ..++||||-..+.+..+... ..+ .+..-..++||+.-.. ....|.|.|.++.|+...... T Consensus 107 ~~~w~hv~~t~ds~~g~~~lyvnG~~~~~~~~~~~-~~~~~~~g~~~~~iG~~~~~g~~~~~f~G~I~dv~v~~~~ls~ 184 (679) T 2sli_A 107 ERVFNTVALKADAANKQCRLFANGELLATLDKDAF-KFISDITGVDNVTLGGTKRQGKIAYPFGGTIGDIKVYSNALSD 184 (679) T ss_dssp EECCEEEEEEEETTTTEEEEEETTEEEEEEECSSC-CCGGGSTTCCEEEESSEEETTEEESCCCEEEEEEEEESSCCCH T ss_pred CCceEEEEEEEecCCCeEEEEECCEEEEeccCCcc-eeeccCCCcceEEECCeeCCCcccceEeeEEEEEEEcCCCCCH Confidence 379999999965 58999999999877655422 111 1333458999984211 123499999999999876544No 50>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A* Probab=96.41 E-value=0.022 Score=75.29 Aligned_cols=122 Identities=17% Similarity=0.291 Sum_probs=80.0 Q ss_pred ceEEEEEEeecCCCCceEEEEEeCCCCeEEEEEEEcccccCceEEEEEEEeccCCcceeEEE--eeeccCCCCceEEEEE Q FBpp0301686 87 EFAILITFRQSSLKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLAS--FGVAHVPDKWNSIALQ 164 (1039) Q Consensus 87 eFSllaT~R~~~~~~g~LfsI~~~~d~~~qlgL~lsg~~~~~~~i~L~Y~~~~~~~~q~~~s--F~v~laDg~WHrlaLs 164 (1039) ++.|.+.||... ..+.||.... +...+|.|+|..- .|.|.|....+. ..++ ....+.||+||+|.|. T Consensus 859 ~~~is~~frT~~-~~GlLl~~~~--~~~dfl~l~L~~G-----~l~~~~~~g~g~---~~~~~~s~~~vnDG~WH~V~~~ 927 (1245) T 3qcw_A 859 SMHLFFQFKTTS-LDGLILYNSG--DGNDFIVVELVKG-----YLHYVFDLGNGA---NLIKGSSNKPLNDNQWHNVMIS 927 (1245) T ss_dssp CEEEEEEEECSC-SCEEEEEEEE--STTCEEEEEEETT-----EEEEEEESSSCC---EEEECCCSSCSCSSSCEEEEEE T ss_pred eEEEEEEEEECC-CCEEEEEeCC--CCCceEEEEEECC-----EEEEEEECCCCc---EEEEecCccccCCCCeEEEEEE Confidence 788888888765 4567765544 2356888888654 477777644332 2233 2567889999999999 Q ss_pred EeCCe-EEEEEccccceeeeccCCCcceeccCCeeEEEEecCcc----------cCcccccceeeeEEee Q FBpp0301686 165 VLSDK-VSFYYDCELRNTTLVTREPIELVFDSASTLYIGQAGSI----------IGGKFEGYLEKINVYG 223 (1039) Q Consensus 165 V~g~~-VtLyVDC~~~~t~~l~r~~~~l~~~~~~~l~IGq~g~~----------~~~~F~G~LQ~L~i~~ 223 (1039) ....+ .+|.||.......... ...| +....||||-.... ....|+|=|++|+|-- T Consensus 928 ~~~~~~~~L~VD~~~~~~~~~~--~~~l--~~~~~lyvGG~~~~~~~~~~~~~~~~~~F~GCi~~l~ing 993 (1245) T 3qcw_A 928 RDTSNLHTVKIDTKITTQITAG--ARNL--DLKSDLYIGGVAKETYKSLPKLVHAKEGFQGCLASVDLNG 993 (1245) T ss_dssp ECTTCEEEEEETTEEEEEECCC--CCCC--CEEEEEEESCCCGGGGGGCCTTCCCSSBCCEEEEEEEETT T ss_pred EcCCceEEEEECCEeeeeecCC--ccee--ccCCCeEEccccccccccchhhcccccCccceecceeECC Confidence 99876 5899998764432211 1123 33467999864210 1246999999999943No 51>3ffz_A Botulinum neurotoxin type E; botulinum neurotoxin serotype E, botulism, domain organization, endopeptidase, translocation, hydrolase; 2.65A {Clostridium botulinum} Probab=95.71 E-value=0.28 Score=62.05 Aligned_cols=164 Identities=8% Similarity=0.062 Sum_probs=97.0 Q ss_pred CcEEEccCCCCCcceEEcCCcc----ccCcccccCCCCCc-ceEEEEEEeecCCC-C-------ceEEEEEeCCCCeEEE Q FBpp0301686 51 AGIEFGEAEDGFPAFRFLQTAD----VKSPYRMLLPEKLY-EFAILITFRQSSLK-G-------GYLFSVVNPLDTVVQL 117 (1039) Q Consensus 51 ~GV~~v~G~d~~pAy~f~~~a~----l~~pt~~~fp~~~~-eFSllaT~R~~~~~-~-------g~LfsI~~~~d~~~ql 117 (1039) ..|.+|.| . .-|+.|..... +. -...++-+.+. +|||.+|+|..... . -+||.-.+. ++. -. T Consensus 876 g~V~lv~G-n-~na~~L~ss~~s~~~I~-~~ndii~n~~~~nFSIsFWvRipk~~~~~~n~~neyTII~~~~~-nNs-GW 950 (1252) T 3ffz_A 876 GDVYKYPT-N-KNQFGIYNDKLSEVNIS-QNDYIIYDNKYKNFSISFWVRIPNYDNKIVNVNNEYTIINCMRD-NNS-GW 950 (1252) T ss_dssp ECCEECTT-C-TTCEEEESSSCEEEEEE-CCTTTSCCSSCCCCEEEEEEECCCCCSTTTCCCCCEEEEEEEET-TTE-EE T ss_pred CceEEEec-C-CceEEeccCCCCceEEe-cCcceeeccccCceEEEEEEEcCCcCCcccccCCcceEEEeecC-CCC-Cc Confidence 45667777 3 45666664322 33 23445555677 99999999974331 1 357866643 332 22 Q ss_pred EEEEcccccCceEEEEEEEeccCCcceeEEEeeeccC------CCCceEEEEEEe-CCeEEEEEccccceeeeccCCCcc Q FBpp0301686 118 GVHLSPVVKNSYNVSLVYTQADQNIGRKLASFGVAHV------PDKWNSIALQVL-SDKVSFYYDCELRNTTLVTREPIE 190 (1039) Q Consensus 118 gL~lsg~~~~~~~i~L~Y~~~~~~~~q~~~sF~v~la------Dg~WHrlaLsV~-g~~VtLyVDC~~~~t~~l~r~~~~ 190 (1039) .+-+... .+.+-..+..+ .++.+.|.+.++ -++||+|+++|. -....+|+|.+++....+.-. T Consensus 951 ~I~l~~n-----~LiWtl~Dsng--n~k~i~f~y~~~~~i~dyiNkW~fITIt~dRlg~a~IYINGkLi~~~~I~~l--- 1020 (1252) T 3ffz_A 951 KVSLNHN-----EIIWTLQDNAG--INQKLAFNYGNANGISDYINKWIFVTITNDRLGDSKLYINGNLIDQKSILNL--- 1020 (1252) T ss_dssp EEEEETT-----EEEEEEECSSS--CEEEEEEECCCCSBCCSSTTSCEEEEEEECTTSEEEEEETTEEEEEEECTTC--- T ss_pred EEEeCCC-----eEEEEEEcCCC--cceeEEEecccccccccccCceEEEEEEEcCCCceeEEECCEEeeccchhhc--- Confidence 2333332 33333333333 335666653222 289999999999 578899999999998865533 Q ss_pred eeccCCeeEEEEecCcccCcccccceeeeEEeeCccccccc Q FBpp0301686 191 LVFDSASTLYIGQAGSIIGGKFEGYLEKINVYGNPDAINVT 231 (1039) Q Consensus 191 l~~~~~~~l~IGq~g~~~~~~F~G~LQ~L~i~~dp~~~~~~ 231 (1039) .++..+..+.++=-+. ... ..+.|.+|+|+..+....+. T Consensus 1021 ~~I~ss~~I~~kl~g~-nd~-~~v~Id~l~If~k~Lt~~EI 1059 (1252) T 3ffz_A 1021 GNIHVSDNILFKIVNC-SYT-RYIGIRYFNIFDKELDETEI 1059 (1252) T ss_dssp CCCCCCSEEEEEEESC-SSC-CEEEEEEEEEESSCCCHHHH T ss_pred ccceecCeEEEEecCC-CCC-cceeEeeeEeecCcCCHHHH Confidence 2233355555532222 122 47899999999988655443No 52>4b1m_A Levanase; hydrolase, CBM66; HET: FRU; 1.10A {Bacillus subtilis} PDB: 4b1l_A* 4azz_A Probab=94.92 E-value=0.14 Score=52.72 Aligned_cols=98 Identities=12% Similarity=0.106 Sum_probs=63.3 Q ss_pred ccCCCCCc-ceEEEEEEeecC----CCCceEEEEEeCCCCeEEEEEEEcccccCceEEEEEEEeccCCcceeEEEeeecc Q FBpp0301686 79 MLLPEKLY-EFAILITFRQSS----LKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLASFGVAH 153 (1039) Q Consensus 79 ~~fp~~~~-eFSllaT~R~~~----~~~g~LfsI~~~~d~~~qlgL~lsg~~~~~~~i~L~Y~~~~~~~~q~~~sF~v~l 153 (1039) .++.+.-+ +|.|-+.+|... .+.+++|.+.. +....+.+.+....+ .+.|+ ...++.. ..++.....+ T Consensus 56 ~l~t~~~~~df~l~~e~k~~~~~~~~nsGi~~r~~~--d~~~~Y~~~i~~~~~---~~~l~-~~~~g~~-~~l~~~~~~~ 128 (185) T 4b1m_A 56 FILSSASGSDFTYESDITIKDGNGRGAGALMFRSDK--DAKNGYLANVDAKHD---LVKFF-KFENGAA-SVIAEYKTPI 128 (185) T ss_dssp EEEEEEEESSEEEEEEEEEEEEEEEEEEEEEEEECT--TSSSEEEEEEETTTT---EEEEE-EEETTEE-EEEEEEECCC T ss_pred EEEcCCccCCEEEEEEEEEccCCCCccEEEEEEecC--CCCCeEEEEEECCCC---EEEEE-EecCCce-eEeeeccccC Confidence 34433334 999999999865 46678887632 344567777766422 34443 3233211 1233323445 Q ss_pred CCCCceEEEEEEeCCeEEEEEccccceeee Q FBpp0301686 154 VPDKWNSIALQVLSDKVSFYYDCELRNTTL 183 (1039) Q Consensus 154 aDg~WHrlaLsV~g~~VtLyVDC~~~~t~~ 183 (1039) ..++|+++.|.|.+++|++|||.+++.+.. T Consensus 129 ~~g~W~~~~I~~~G~~i~v~vNG~~v~~~~ 158 (185) T 4b1m_A 129 DVNKKYHLKTEAEGDRFKIYLDDRLVIDAH 158 (185) T ss_dssp CSSCCEEEEEEEETTEEEEEETTEEEEEEE T ss_pred CCCCeEEEEEEEECCEEEEEECCEEEEEEE Confidence 579999999999999999999999876653No 53>1ms9_A Trans-sialidase; trans-glycosylation, protein-acrbohydrate interac beta-propeller, hydrolase; HET: LAT; 1.58A {Trypanosoma cruzi} SCOP: b.29.1.15 b.68.1.1 PDB: 1ms0_A* 1mr5_A* 1ms1_A 1ms4_A 1ms8_A* 1ms3_A* 2ah2_A* 3b69_A* 3opz_A 3pjq_A* 1s0i_A* 1s0j_A* 1ms5_A 1wcs_A 2ags_A* 2a75_A* 2fhr_A* 1n1t_A* 1n1s_A* 1n1v_A* ... Probab=91.87 E-value=2 Score=52.90 Aligned_cols=127 Identities=13% Similarity=0.107 Sum_probs=73.4 Q ss_pred ceEEEEEEeec--CCCCceEEEEE-eCCCCeEEEEEEEcccccCceEEEEEEEeccCCcceeEEEeeeccCCCCceEEEE Q FBpp0301686 87 EFAILITFRQS--SLKGGYLFSVV-NPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLASFGVAHVPDKWNSIAL 163 (1039) Q Consensus 87 eFSllaT~R~~--~~~~g~LfsI~-~~~d~~~qlgL~lsg~~~~~~~i~L~Y~~~~~~~~q~~~sF~v~laDg~WHrlaL 163 (1039) +|+|+||+-.. ++..-.|+.+. +...+.+.|+|..+..++ -.+.|... ... . ...---++=|+|+| T Consensus 495 ~ftlvatv~i~~~p~~~~pl~g~~~~~~~~~~~~glsy~~~~~----w~~~~~~~--~~~-~----~~~w~~~~~~qv~l 563 (648) T 1ms9_A 495 AFTLVASVTIHEVPKGASPLLGASLDSSGGKKLLGLSYDKRHQ----WQPIYGST--PVT-P----TGSWEMGKRYHVVL 563 (648) T ss_dssp EEEEEEEEEECSCCSSCEEEEEEESSSSSSSEEEEEEECTTSC----EEEEETTS--CCC-C----BSCCCTTCEEEEEE T ss_pred cEEEEEEEEEecCCCCCCceeEEEeccCCCcEEEEEEEeCCCc----EEEEeCCC--Ccc-c----cccccCCceEEEEE Confidence 99999999863 33333455543 222335566666554322 33334211 100 0 11122357799999 Q ss_pred EEeCCeEEEEEccccce-ee--eccCCCcceeccCCeeEEEEecCccc-CcccccceeeeEEeeCcccc Q FBpp0301686 164 QVLSDKVSFYYDCELRN-TT--LVTREPIELVFDSASTLYIGQAGSII-GGKFEGYLEKINVYGNPDAI 228 (1039) Q Consensus 164 sV~g~~VtLyVDC~~~~-t~--~l~r~~~~l~~~~~~~l~IGq~g~~~-~~~F~G~LQ~L~i~~dp~~~ 228 (1039) .+++.+.++|||-+.+. .. .+.- ... ..-+.+|||-.+... .......+-++.||-.|.-. T Consensus 564 ~l~~~~~s~yvdg~~~~~~~~~~~~~-~~~---~~ishfy~gg~~~~~~~~~~~vtv~nv~lynr~l~~ 628 (648) T 1ms9_A 564 TMANKIGSVYIDGEPLEGSGQTVVPD-ERT---PDISHFYVGGYKRSGMPTDSRVTVNNVLLYNRQLNA 628 (648) T ss_dssp EEETTEEEEEETTEECTTCCEECSCS-SCC---CCCCEEEESSCSCTTSCCCCCEEEEEEEEESSCCCH T ss_pred EEeCCEEEEEECCEeccccccccccC-Ccc---cccceEEEcCCCCccCCCCCCEEEEEeEEecCCCCH Confidence 99999999999998883 22 2221 111 234789998653211 23456778999999887543No 54>4ccd_A Galactocerebrosidase; hydrolase, krabbe disease, glycosyl hydrolase, galactosidase D-galactal, lysosomal storage disease, enzyme-intermediate; HET: 2DG NAG; 1.97A {Mus musculus} PDB: 4ccc_A* 4cce_A* 4ufh_A* 4ufi_A* 4ufj_A* 4ufk_A* 4ufl_A* 4ufm_A* 3zr5_A* 3zr6_A* Probab=90.75 E-value=2.1 Score=52.86 Aligned_cols=89 Identities=7% Similarity=-0.081 Sum_probs=58.8 Q ss_pred ceEEEEEEeecCC-CC--ceEEEEEeCC---CCeEEEEEEEcccccCceEEEEEEEeccCCcceeEEEeeeccCCCCceE Q FBpp0301686 87 EFAILITFRQSSL-KG--GYLFSVVNPL---DTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLASFGVAHVPDKWNS 160 (1039) Q Consensus 87 eFSllaT~R~~~~-~~--g~LfsI~~~~---d~~~qlgL~lsg~~~~~~~i~L~Y~~~~~~~~q~~~sF~v~laDg~WHr 160 (1039) ||+|.+.||.... .. +.+|.+.+.. +....+.+.|.... ++.|.. ..++. ..+++-.+.+..++||+ T Consensus 528 Dy~v~~dv~~~~~~~g~agl~fR~~~~G~~~~~~~gY~~~i~~~G----~~~l~k-~~~g~--~~La~~~~~~~~~~w~~ 600 (654) T 4ccd_A 528 NMTVQCDVYIETPRSGGVFIAGRVNKGGILIRSATGVFFWIFANG----SYRVTA-DLGGW--ITYASGHADVTAKRWYT 600 (654) T ss_dssp EEEEEEEEEECSTTTCEEEEEEEECCCGGGGGGCEEEEEEEETTT----EEEEEE-ETTCC--SEEEEEECSCCTTCEEE T ss_pred cEEEEEEEEeccCCCCeEEEEEEEcCCCCCccccceEEEEEeCCC----eEEEEE-ecCCe--EEEEeeeccCCCCceEE Confidence 9999999998763 22 3455544421 12456677776432 344443 33332 23444455677899999 Q ss_pred EEEEEeCCeEEEEEccccceee Q FBpp0301686 161 IALQVLSDKVSFYYDCELRNTT 182 (1039) Q Consensus 161 laLsV~g~~VtLyVDC~~~~t~ 182 (1039) |.|.|.+++|++|||-+++-+. T Consensus 601 l~v~v~G~~I~v~vdG~~v~~~ 622 (654) T 4ccd_A 601 LTLGIKGYFAFGMLNGTILWKN 622 (654) T ss_dssp EEEEEETTEEEEEETTEEEEEE T ss_pred EEEEEECCEEEEEECCEEEEEE Confidence 9999999999999999877554No 55>1ei8_A Collagen-like peptide (Pro-HYP-Gly)4-PG-(Pro-HYP- Gly)5; triple helix, contractIle protein; 2.00A {Synthetic} SCOP: k.3.1.1 Probab=89.70 E-value=0.53 Score=34.11 Aligned_cols=12 Identities=92% Similarity=2.189 Sum_probs=4.7 Q ss_pred CCCCCCCCCCCC Q FBpp0301686 324 PPGPPGPPGPKG 335 (1039) Q Consensus 324 ~pGppG~pG~~G 335 (1039) ++|++|++|++| T Consensus 15 ~pG~~G~pG~~G 26 (29) T 1ei8_A 15 PPGPPGPPGPPG 26 (29) T ss_dssp CCCCCCCCCCCC T ss_pred CCCCCCCCCCCC Confidence 333333333333No 56>4ae2_A Procollagen III, collagen alpha-1(III) chain; structural protein, fibrillar collagen, extracellular matrix fibrosis; 1.68A {Homo sapiens} PDB: 4aej_A* 4ak3_A Probab=81.90 E-value=0.28 Score=53.64 Aligned_cols=38 Identities=18% Similarity=0.248 Sum_probs=14.6 Q ss_pred CCCCchHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCC Q FBpp0301686 677 PGARSSLDELKALRELQDLRDRPDGTAEPPRQPGHSHK 714 (1039) Q Consensus 677 ~g~~~~~dtLksL~~~~~~~~~P~Gt~~~Pa~~~~d~~ 714 (1039) .++.+++.+|++|+++++.++.|+|++.+|+|+|+|+. T Consensus 19 ~~~~~i~~~l~~l~~~i~~~~~p~Gt~~~p~rtC~dl~ 56 (256) T 4ae2_A 19 INTDEIMTSLKSVNGQIESLISPDGSRKNPARNCRDLK 56 (256) T ss_dssp ----------------------CCSSSSSCBSCHHHHH T ss_pred cccHHHHHHHHHHHHHHHhhhcCCCcccCCccCHHHHH Confidence 44567899999999999999999999999999999853No 57>2zzj_A Glucuronan lyase A; beta-jelly roll; HET: CIT; 1.80A {Trichoderma reesei} Probab=80.94 E-value=32 Score=36.94 Aligned_cols=178 Identities=13% Similarity=0.106 Sum_probs=92.3 Q ss_pred CCcEEEccC--CCCCcceEEcCCccc---cCcccccCCC-CCc---ceEEEEEEeec-----CCCCceEEEEEeCC-C-- Q FBpp0301686 50 FAGIEFGEA--EDGFPAFRFLQTADV---KSPYRMLLPE-KLY---EFAILITFRQS-----SLKGGYLFSVVNPL-D-- 112 (1039) Q Consensus 50 ~~GV~~v~G--~d~~pAy~f~~~a~l---~~pt~~~fp~-~~~---eFSllaT~R~~-----~~~~g~LfsI~~~~-d-- 112 (1039) ...|+.|.. .++..|++|.-..+. ...-.++.-. .++ ++.+-+.|+.. ......|+...... + T Consensus 21 ~~~i~~v~~~~~~G~~alr~~~~~d~~~~~~~RsE~~~~~~~~~g~~~wy~fs~~lp~d~~~~~~~~~iaQw~~~~~~~~ 100 (238) T 2zzj_A 21 QGTVSEVSNVVFKGTSALKMTQTYTPGYTGRYHSEVDHNRGYQRGEEQFYGFAFRLSEDWQFQPQSYNIAQFIANRPGAG 100 (238) T ss_dssp TCEEEEESSSCSSTTCEEEEEEECCTTCCSCCEEEEEEEEEEETTEEEEEEEEEEECTTCCCCSSEEEEEEEEEECTTCC T ss_pred CCceEEeCccccCCCCEEEEEEeCCCCCCCccceEEeecCCCCCCCcEEEEEEEECCCCCcCCCCceEEEEEEecCCCCC Confidence 445777766 456788888722221 1111111111 122 44444445532 22333455554422 1 Q ss_pred -C----eEEEEEEEcccccCceEEEEEEEecc--CC-cceeEEEe--eeccCCCCceEEEEEEe-----CCeEEEEEccc Q FBpp0301686 113 -T----VVQLGVHLSPVVKNSYNVSLVYTQAD--QN-IGRKLASF--GVAHVPDKWNSIALQVL-----SDKVSFYYDCE 177 (1039) Q Consensus 113 -~----~~qlgL~lsg~~~~~~~i~L~Y~~~~--~~-~~q~~~sF--~v~laDg~WHrlaLsV~-----g~~VtLyVDC~ 177 (1039) + .+-|.|.+.+. ++.+++.... ++ -.+....| ..++.-|+||+|.|.|. ...+.||+|-+ T Consensus 101 ~~~~~~~P~~~l~v~g~-----~l~~r~~~g~~~~~~~~~~~~~~~~~~~~~~G~W~~~vi~v~ws~d~~G~~~vw~nG~ 175 (238) T 2zzj_A 101 CGGDDWMPSTMIWIQNN-----QLYSRYVNGHYRQPNCGRNIVTRPNLATVSAGAWHRVVLQIKWASDNTGYFKIWFDGA 175 (238) T ss_dssp CSSSSEEEEEEEEEETT-----EEEEEEEEECCBTTBCCEEEEEEEEEEECCTTSCEEEEEEEEECSSTTEEEEEEETTE T ss_pred CCccCCCCceeEEEECC-----EEEEEEecCCccCccccCceeeecccCccCCCCeEEEEEEEEecCCCCEEEEEEECCE Confidence 1 67888887664 3444443211 11 11233344 23556799999999998 45899999999 Q ss_pred cceeeeccCCCcceeccCCe--eEEEEecCccc--CcccccceeeeEEeeCcccccccCCCCC Q FBpp0301686 178 LRNTTLVTREPIELVFDSAS--TLYIGQAGSII--GGKFEGYLEKINVYGNPDAINVTCMPPP 236 (1039) Q Consensus 178 ~~~t~~l~r~~~~l~~~~~~--~l~IGq~g~~~--~~~F~G~LQ~L~i~~dp~~~~~~C~~~~ 236 (1039) ++....=.. +.++... .+.+|--.... .....|...+..|+.|--..-..|.+.+ T Consensus 176 ~v~~~~g~~----~~~~d~~~~yfK~GiYr~~w~~~~~~~g~~~~~~iy~D~v~ig~t~~dv~ 234 (238) T 2zzj_A 176 KVHEEYNVA----TTVDDDSVFQFRVGLYANSWHDDGHMTGTQGFRQVWYDEVAVGTTFADVD 234 (238) T ss_dssp EEEEEEEEC----CSBSSCCEEEEEEEEECHHHHHHSSCCSSCCEEEEEEEEEEEESSHHHHC T ss_pred EEEEEeCCc----cccCCCCcceEEEEEcCCccccCcccCCCCcceEEEEeCeEEeCcHHHcC Confidence 876542111 1122222 24555543211 1235666677788888766666676543No 58>1pwb_A SP-D, PSP-D, pulmonary surfactant-associated protein D; collectin, C-type lectin, alpha-helical coiled coil, carbohydrate recognition domain; HET: GLC; 1.40A {Homo sapiens} SCOP: d.169.1.1 h.1.1.1 PDB: 1pw9_A* 3ikn_A* 3ikp_A* 3ikq_A* 3ikr_A* 4e52_A* 2rie_A* 2ggx_A* 2ggu_A* 2ork_A* 2orj_A* 2ria_A* 2rib_A* 2ric_A* 2rid_A* 2os9_A* 3dbz_A 3g81_A* 3g83_A* 1b08_A ... Probab=76.25 E-value=0.64 Score=46.56 Aligned_cols=12 Identities=25% Similarity=0.952 Sum_probs=8.8 Q ss_pred cccccCCcEEEE Q FBpp0301686 984 RQSCDSKLIILC 995 (1039) Q Consensus 984 ~~~C~~~~~~lC 995 (1039) ..+|+..+..+| T Consensus 164 d~~C~~~~~~iC 175 (177) T 1pwb_A 164 DRACGEKRLVVC 175 (177) T ss_dssp EECTTSEEEEEE T ss_pred CccCCCCeeEEE Confidence 357888777777No 59>3zyp_A CIP1; metal binding protein, calcium-binding, CBM-containing, beta sandwich jelly roll, carbohydrate-binding; HET: NAG; 1.50A {Hypocrea jecorina} Probab=75.79 E-value=9.9 Score=40.49 Aligned_cols=117 Identities=7% Similarity=0.072 Sum_probs=69.8 Q ss_pred CCCCcceEEcCCccccCcccccC-CCCCc--ceEEEEEEeecCC---CCceEEEEEeCCCCeEEEEEEEcccccCceEEE Q FBpp0301686 59 EDGFPAFRFLQTADVKSPYRMLL-PEKLY--EFAILITFRQSSL---KGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVS 132 (1039) Q Consensus 59 ~d~~pAy~f~~~a~l~~pt~~~f-p~~~~--eFSllaT~R~~~~---~~g~LfsI~~~~d~~~qlgL~lsg~~~~~~~i~ 132 (1039) |.+..+.+|...+.= .....+| ...+| +|++=+.||..+. +...+|++.+..++.. +|++.+... + T Consensus 36 hsG~~Slrv~~ga~g-~~~~~~~~~~a~psg~~y~R~~v~~~~~~~~~h~t~~~~~~~~~~~~--~lRiGgq~~----~- 107 (218) T 3zyp_A 36 HSGSNSMKVVGGPNG-YCGHIFFGTTQVPTGDVYVRAWIRLQTALGSNHVTFIIMPDTAQGGK--HLRIGGQSQ----V- 107 (218) T ss_dssp SSSSCEEEEECCSSG-GGGCEEEEECCCCSSSEEEEEEEEESSCCCSSCEEEEEEEBGGGTTC--EEEEEEETT----E- T ss_pred cCCceeEEEecCCCC-CccceeeeeccCCCCceEEEEEEEeccCCCCCcEEEEEeecCCCCCc--cEEEccccc----e- Confidence 777888888533211 1111111 12334 7888889997543 3447888887655433 456666532 2 Q ss_pred EEEEec-c-CC---cceeEEEeeeccCCCCceEEEEEEeC-CeEEEEEccccceeee Q FBpp0301686 133 LVYTQA-D-QN---IGRKLASFGVAHVPDKWNSIALQVLS-DKVSFYYDCELRNTTL 183 (1039) Q Consensus 133 L~Y~~~-~-~~---~~q~~~sF~v~laDg~WHrlaLsV~g-~~VtLyVDC~~~~t~~ 183 (1039) |.|... + .. ++.+-+.-.+.+..++||.|.+.|.. ..+++|||-+++.... T Consensus 108 l~~n~~sddat~p~~sp~G~a~s~~l~~~~W~C~E~~v~~~g~~~~WldG~~v~~lt 164 (218) T 3zyp_A 108 LDYNRESDDATLPDLSPNGIASTVTLPTGAFQCFEYHLGTDGTIETWLNGSLIPGMT 164 (218) T ss_dssp EEEEETTTCCEESCSSHHHHHHSCCCCCSSCEEEEEEECSSSCEEEEETTEECGGGC T ss_pred eeeeeccCcccccccCCCcccccccccCCcEEEEEEEECCCCeEEEEECCEEeeeEE Confidence 444333 2 11 11111111457789999999999975 4899999999987753No 60>1pwb_A SP-D, PSP-D, pulmonary surfactant-associated protein D; collectin, C-type lectin, alpha-helical coiled coil, carbohydrate recognition domain; HET: GLC; 1.40A {Homo sapiens} SCOP: d.169.1.1 h.1.1.1 PDB: 1pw9_A* 3ikn_A* 3ikp_A* 3ikq_A* 3ikr_A* 4e52_A* 2rie_A* 2ggx_A* 2ggu_A* 2ork_A* 2orj_A* 2ria_A* 2rib_A* 2ric_A* 2rid_A* 2os9_A* 3dbz_A 3g81_A* 3g83_A* 1b08_A ... Probab=75.00 E-value=1.2 Score=44.47 Aligned_cols=22 Identities=14% Similarity=0.015 Sum_probs=11.2 Q ss_pred chHHHHHHHHHHHhhcCCCCCC Q FBpp0301686 681 SSLDELKALRELQDLRDRPDGT 702 (1039) Q Consensus 681 ~~~dtLksL~~~~~~~~~P~Gt 702 (1039) .+...|++|+..++.++.+.++ T Consensus 28 ~l~~~l~~l~~~l~~l~~~~~~ 49 (177) T 1pwb_A 28 SLRQQVEALQGQVQHLQAAFSQ 49 (177) T ss_dssp HHHHHHHHHHHHHHHHHHHHHH T ss_pred chhhhhhHHHHHHHHHHHHHHh Confidence 3455677776644443333333No 61>3w9a_A CCGH131A, putative uncharacterized protein; beta-jelly roll, hydrolase; 1.99A {Coprinopsis cinerea} Probab=66.44 E-value=26 Score=37.99 Aligned_cols=76 Identities=7% Similarity=0.087 Sum_probs=49.9 Q ss_pred ceEEEEEEeecC-----CCCceEEEEEeCCCCeEEEEEEEcccccCceEEEEEEEeccCCcceeEEEeeeccCCCCceEE Q FBpp0301686 87 EFAILITFRQSS-----LKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLASFGVAHVPDKWNSI 161 (1039) Q Consensus 87 eFSllaT~R~~~-----~~~g~LfsI~~~~d~~~qlgL~lsg~~~~~~~i~L~Y~~~~~~~~q~~~sF~v~laDg~WHrl 161 (1039) --++.+.||.+. .+..|+++.... .+++|++....+ .-.|+|.... ...|..++.++.||+| T Consensus 93 ~~~~HfSv~~d~~~pln~sheyq~~f~ES----h~felk~G~~~~---~~~l~~~~~~------~~~wstpf~~~~W~NF 159 (245) T 3w9a_A 93 NLFYHFSIKRTNTNAPDPTLEHQVMFFES----HFTELKYGVGSN---PSNLGWYAGG------TERWSTPFTADTWFNF 159 (245) T ss_dssp EEEEEEEEECCSTTCCCTTSCEEEEEETT----CSEEEEESCSSC---TTEEEEEETT------EEEEEEECCTTCCEEE T ss_pred eEEEEEEEEeccccCCcCccceeeecccc----ceEEEEeCCCCC---CCcEEEecCC------ceEEEeeecCCcEEEE Confidence 455666666532 355677766553 378888874322 1246666543 2567899999999999 Q ss_pred EEEEeC--CeEEEEEc Q FBpp0301686 162 ALQVLS--DKVSFYYD 175 (1039) Q Consensus 162 aLsV~g--~~VtLyVD 175 (1039) ++.|.= +.|.+|.- T Consensus 160 Ai~iDf~~nt~~vy~S 175 (245) T 3w9a_A 160 AYDIDFTAKTVGLWAS 175 (245) T ss_dssp EEEEETTTTEEEEEEE T ss_pred EEEeecCCCEEEEEEe Confidence 998855 67888753No 62>4le3_A Beta-glucanase; GH131, hydrolase; 1.80A {Podospora anserina} PDB: 4le4_A* Probab=65.02 E-value=30 Score=37.58 Aligned_cols=77 Identities=9% Similarity=0.166 Sum_probs=49.2 Q ss_pred ceEEEEEEeec-----CCCCceEEEEEeCCCCeEEEEEEEc----ccccCceEEEEEEEeccCCcceeEEEeeeccCCCC Q FBpp0301686 87 EFAILITFRQS-----SLKGGYLFSVVNPLDTVVQLGVHLS----PVVKNSYNVSLVYTQADQNIGRKLASFGVAHVPDK 157 (1039) Q Consensus 87 eFSllaT~R~~-----~~~~g~LfsI~~~~d~~~qlgL~ls----g~~~~~~~i~L~Y~~~~~~~~q~~~sF~v~laDg~ 157 (1039) --++.+.||.+ ..+..|+++.... .+++|++. ....+ .-.|++.... ...|.+++.++. T Consensus 94 ~~~~HfSv~~d~~~pln~shEyqi~F~ES----h~~elk~G~~~g~~~~~--~~~l~~~~~~------~~~wstp~~~~~ 161 (252) T 4le3_A 94 KVYYHFSLMRKDINAPATTREHQIAFFES----HFTELKSGWLSGAPGIS--DTLLRWCVGG------QTQWSVEWAADV 161 (252) T ss_dssp EEEEEEEEECCSTTCCCTTSCEEEEEETT----CSEEEEESCCSSSCCGG--GGEEEEEETT------EEEEEEECCTTC T ss_pred eEEEEEEEEeCcCcCCCCCcceeEEeecc----cEEEEEeccccCCCCCC--CCeEEEecCC------ceEEEeeeccCc Confidence 34555566652 2255777777663 37888886 11001 1235555431 346789999999 Q ss_pred ceEEEEEEe--CCeEEEEEc Q FBpp0301686 158 WNSIALQVL--SDKVSFYYD 175 (1039) Q Consensus 158 WHrlaLsV~--g~~VtLyVD 175 (1039) ||+||+.|. .+.|.+|.- T Consensus 162 W~NFA~~iDf~~nt~~v~~S 181 (252) T 4le3_A 162 WHNVAYEIDFAAGTVGFWHS 181 (252) T ss_dssp CEEEEEEEETTTTEEEEEEE T ss_pred EEEEEEEeeecCCEEEEEEe Confidence 999999988 788988863No 63>3imm_A Putative secreted glycosylhydrolase; YP_001301887.1, putative glycosyl hydrolase; HET: MSE; 2.00A {Parabacteroides distasonis atcc 8503} Probab=57.19 E-value=12 Score=38.96 Aligned_cols=103 Identities=12% Similarity=0.228 Sum_probs=54.9 Q ss_pred ccCCCCCc-ceEEEEEEeec-CCCCceEEEEEeCCCC-eEEEEEEEcccccCceE-EEEEEEeccCCcceeEE-Eeeecc Q FBpp0301686 79 MLLPEKLY-EFAILITFRQS-SLKGGYLFSVVNPLDT-VVQLGVHLSPVVKNSYN-VSLVYTQADQNIGRKLA-SFGVAH 153 (1039) Q Consensus 79 ~~fp~~~~-eFSllaT~R~~-~~~~g~LfsI~~~~d~-~~qlgL~lsg~~~~~~~-i~L~Y~~~~~~~~q~~~-sF~v~l 153 (1039) .++.+.-+ +|.|.+-+|.. ..++|++|......+. ..-++++|......... +. .+...++.-....+ .-.... T Consensus 39 ~l~t~~~y~df~L~~e~k~~~~~NSGi~~r~~~~~~~~~~G~E~Qi~d~~~~~~~~~~-~~~~~G~ly~~~~~~~~~~~k 117 (201) T 3imm_A 39 SIWTKDEYENFELDLDFKTDVGTNSGVVVYCTDTKDWIPNSVEIQIADDHCEKWGNGK-PYEKCGAIYGHLGAVQDKVVK 117 (201) T ss_dssp CEEESSCBCSEEEEEEEEECTTCEEEEEEEESCSSSCTTSSEEEEEECTTCCTTTTCC-GGGSTTSBTTTBCCSSSCCSC T ss_pred cEEECCcccCEEEEEEEEeCCCCCCEEEEEeccCCCCcCceEEEEEECCCCCcccccC-CccccceeecccCcccccccC Confidence 44444445 99999999975 4667888877653110 01134444322110000 00 00001110000000 001112 Q ss_pred CCCCceEEEEEEeCCeEEEEEccccceee Q FBpp0301686 154 VPDKWNSIALQVLSDKVSFYYDCELRNTT 182 (1039) Q Consensus 154 aDg~WHrlaLsV~g~~VtLyVDC~~~~t~ 182 (1039) ..++|+++-|.|.+++|++|||-.++... T Consensus 118 p~geWn~~~I~~~g~~i~v~lNG~~v~~~ 146 (201) T 3imm_A 118 KPGEWNHMRIKCAGQHIMVILNGKKVTEM 146 (201) T ss_dssp CTTSEEEEEEEEETTEEEEEETTEEEEEE T ss_pred CCCccEEEEEEEECCEEEEEECCEEEEEE Confidence 36899999999999999999999998764No 64>2dpr_A Conantokin-T, CON-T; conantoxin, nmdar antagonist, GLA-containing, metal B protein; HET: CGU; 1.70A {Conus tulipa} PDB: 1ont_A* Probab=54.58 E-value=6.5 Score=25.41 Aligned_cols=12 Identities=50% Similarity=0.717 Sum_probs=10.7 Q ss_pred hHHHHHHHHhhh Q FBpp0301686 1027 ADEYAAHLENLL 1038 (1039) Q Consensus 1027 ~~~~~~~~~~~~ 1038 (1039) |+||++.||||. T Consensus 2 eeeyqemlenlr 13 (21) T 2dpr_A 2 EEEYQEMLENLR 13 (26) T ss_dssp CHHHHHHHHHHH T ss_pred cHHHHHHHHHHH Confidence 689999999985No 65>3s5q_A Putative glycosylhydrolase; concanavalin A-like lectins/glucanases, structural genomics, center for structural genomics, JCSG; 1.85A {Parabacteroides distasonis} Probab=52.01 E-value=16 Score=38.56 Aligned_cols=118 Identities=11% Similarity=0.197 Sum_probs=60.0 Q ss_pred eEEcCCccccCcccccCCCCCc-ceEEEEEEeec-CCCCceEEEEEeCCCC-eEEEEEEEcccccCceEEEEEEEeccCC Q FBpp0301686 65 FRFLQTADVKSPYRMLLPEKLY-EFAILITFRQS-SLKGGYLFSVVNPLDT-VVQLGVHLSPVVKNSYNVSLVYTQADQN 141 (1039) Q Consensus 65 y~f~~~a~l~~pt~~~fp~~~~-eFSllaT~R~~-~~~~g~LfsI~~~~d~-~~qlgL~lsg~~~~~~~i~L~Y~~~~~~ 141 (1039) |++.+.+-+......++.+.-+ +|.|.+-+|.. ..++|++|......+. ..-++++|.........-.......++. T Consensus 38 w~VedG~l~~~~~G~L~t~~~f~dF~L~~e~k~~~~~NSGI~~r~~~~~~~~~~G~E~QIld~~~~~~~~~~~~~~~Gsl 117 (214) T 3s5q_A 38 WTFKNGILTATADQSIWTKVQYENFILDLEFKTDVNTNSGVVIYCTDKGNWIPSSIEIQIADDHHPEWQSYPEYWRCGSI 117 (214) T ss_dssp EEEETTEEEESSSCCEEESSCBCSEEEEEEEEECTTCEEEEEEEESCSTTCGGGSEEEEEECTTSGGGGGSCGGGSTTSB T ss_pred EEEeCCEEEECCCccEEECCeeccEEEEEEEEECCCCccEEEEEecCCCCCcceEEEEEEECCCCCcccccCCCCceeee Confidence 5554443222121344444445 99999999975 4677888877653111 0113444432110000000000001110 Q ss_pred cceeEE-EeeeccCCCCceEEEEEEeCCeEEEEEccccceee Q FBpp0301686 142 IGRKLA-SFGVAHVPDKWNSIALQVLSDKVSFYYDCELRNTT 182 (1039) Q Consensus 142 ~~q~~~-sF~v~laDg~WHrlaLsV~g~~VtLyVDC~~~~t~ 182 (1039) -....+ .-......++|+++-|.|.+++|++|||-.++... T Consensus 118 Y~~~~~~~~~~~kp~geWn~~~I~~~g~~i~v~lNG~~v~~~ 159 (214) T 3s5q_A 118 YGHKGANEQLVVKKPGEWNRMIITAKGQQIDIELNGKHIVSA 159 (214) T ss_dssp TTTBCCSSSCCSCCTTSEEEEEEEEETTEEEEEETTEEEEEE T ss_pred ccccCcccccccCCCCceEEEEEEEECCEEEEEECCEEEEEE Confidence 000000 00111236899999999999999999999998664No 66>3u1x_A Putative glycosyl hydrolase; glycosyl hydrolysis, carbohydrate metabolism,, structural GE joint center for structural genomics, JCSG; HET: MSE PGE; 1.70A {Parabacteroides distasonis} Probab=50.42 E-value=23 Score=37.82 Aligned_cols=103 Identities=15% Similarity=0.140 Sum_probs=54.7 Q ss_pred cCCCCCc-ceEEEEEEeec-CCCCceEEEEEeCCC----CeEEEEEEEcccccCc-----eEEEEEE--EeccCCcceeE Q FBpp0301686 80 LLPEKLY-EFAILITFRQS-SLKGGYLFSVVNPLD----TVVQLGVHLSPVVKNS-----YNVSLVY--TQADQNIGRKL 146 (1039) Q Consensus 80 ~fp~~~~-eFSllaT~R~~-~~~~g~LfsI~~~~d----~~~qlgL~lsg~~~~~-----~~i~L~Y--~~~~~~~~q~~ 146 (1039) ++.+.-+ +|.|.+-+|.. ..++|++|.+..... -..-++++|....... -.+. .| ...+..-.... T Consensus 72 l~t~~~y~dF~L~~e~k~~~~~NSGI~~r~~~~~~~~~~~~~g~E~QIld~~~~~~~~~~~~~~-~~~~~~~G~ly~~~~ 150 (236) T 3u1x_A 72 IVTVKNYHNFQIKWDWKIGAQGNSGFLYHVQEGPKYKAPFETGPEYQLIDDDNYPWVSETGKEG-LEDWQKTGCNYAMYV 150 (236) T ss_dssp EEEEEEESSEEEEEEEEECTTCEEEEEEEECCSTTCSCGGGTSCEEEEECTTCCCCBCTTSCBS-CCGGGSTTCBTTTBC T ss_pred eeECCccccEEEEEEEEeCCCCccEEEEEeccCccccCCCcceEEEEEECCCCCcccccccccC-CCccccccccccccC Confidence 3333335 99999999975 467788877654311 0011345552211100 0000 00 00110000000 Q ss_pred EEeeeccCCCCceEEEEEEeCCeEEEEEccccceeee Q FBpp0301686 147 ASFGVAHVPDKWNSIALQVLSDKVSFYYDCELRNTTL 183 (1039) Q Consensus 147 ~sF~v~laDg~WHrlaLsV~g~~VtLyVDC~~~~t~~ 183 (1039) +.-......++|+++-|.|.+++|+++||-.++.... T Consensus 151 ~~~~~~~~~geWn~~~I~~~g~~i~v~lNG~~v~~~~ 187 (236) T 3u1x_A 151 PETKQVNPPGEWNSSMVLYKDGYVEHWLNGEKLFSFQ 187 (236) T ss_dssp CSSCCCCCTTSCEEEEEEEETTEEEEEETTEEEEEEE T ss_pred CccccCCCCCcceEEEEEEECCEEEEEECCEEEEEEe Confidence 1111223368999999999999999999999887653No 67>1buu_A Protein (mannose-binding protein A); lectin, HOST defense, metalloprotein, sugar binding protein; 1.90A {Rattus norvegicus} SCOP: d.169.1.1 h.1.1.1 Probab=45.97 E-value=5.2 Score=40.01 Aligned_cols=12 Identities=25% Similarity=0.656 Sum_probs=10.1 Q ss_pred cccccCCcEEEE Q FBpp0301686 984 RQSCDSKLIILC 995 (1039) Q Consensus 984 ~~~C~~~~~~lC 995 (1039) ..+|+.++..+| T Consensus 153 d~~C~~~~~~IC 164 (168) T 1buu_A 153 DISCQASHTAVC 164 (168) T ss_dssp EECTTSCEEEEE T ss_pred CcCCCCCeeEEE Confidence 468999998888No 68>3hbk_A Putative glycosyl hydrolase; YP_001302580.1, WAS domain of U function (DUF1080), structural genomics; HET: MSE; 2.36A {Parabacteroides distasonis atcc 8503} Probab=38.55 E-value=97 Score=33.26 Aligned_cols=103 Identities=16% Similarity=0.183 Sum_probs=55.2 Q ss_pred ccCCCCCc-ceEEEEEEeec-CCCCceEEEEEeCCCC---eEEEEEEEcccccCceEEEEEEE------eccCCcceeEE Q FBpp0301686 79 MLLPEKLY-EFAILITFRQS-SLKGGYLFSVVNPLDT---VVQLGVHLSPVVKNSYNVSLVYT------QADQNIGRKLA 147 (1039) Q Consensus 79 ~~fp~~~~-eFSllaT~R~~-~~~~g~LfsI~~~~d~---~~qlgL~lsg~~~~~~~i~L~Y~------~~~~~~~q~~~ 147 (1039) .++.+.-+ +|.|.+-+|.. ..++|++|.+...... ..-++++|....... .. ..+. ..++.-....+ T Consensus 77 ~l~t~~~y~dF~L~~E~k~~~~~NSGI~~r~~~~~~~~~~~~g~E~QIld~~~~~-~~-~~g~~~~~~~~~G~ly~~~~~ 154 (245) T 3hbk_A 77 DIVTEGEYSAFEFSVDFKITEGANSGIKYFVTEQEKQKGSAYGLEFQLLDDAKHP-DA-KLYTTFPGSRTLGSLYDLKKS 154 (245) T ss_dssp CEEESSCBSSEEEEEEEEECTTCEEEEEEEECCCSCSSSCCCCEEEEEECTTTCT-TT-TCCSSSTTTTSTTSBTTTBCC T ss_pred eEEECCccccEEEEEEEEeCCCCCcEEEEEeccCCCCCCcceEEEEEEECCCCCC-cc-ccccccCCCccEeeccccccc Confidence 44444445 99999999974 5667888876543111 112344443211000 00 0000 00000000000 Q ss_pred EeeeccCCCCceEEEEEE-eCCeEEEEEccccceeee Q FBpp0301686 148 SFGVAHVPDKWNSIALQV-LSDKVSFYYDCELRNTTL 183 (1039) Q Consensus 148 sF~v~laDg~WHrlaLsV-~g~~VtLyVDC~~~~t~~ 183 (1039) .-......++|+++-|.| .+++|++|||-.++.... T Consensus 155 ~~~~~~p~geWN~~~I~~~~g~~i~v~lNG~~V~~~~ 191 (245) T 3hbk_A 155 ENIHFNGVGEWNTAVVKVFPNNHVEHWLNGVKVLEYE 191 (245) T ss_dssp CSCCCCCTTSEEEEEEEECTTCEEEEEETTEEEEEEE T ss_pred ccccCCCCCccEEEEEEEEcCCEEEEEECCEEEEEee Confidence 001112258999999999 899999999999987653No 69>3h3l_A Putative sugar hydrolase; YP_001304206.1, structural genomic center for structural genomics, JCSG; HET: MSE; 1.59A {Parabacteroides distasonis atcc 8503} Probab=38.36 E-value=73 Score=34.19 Aligned_cols=103 Identities=14% Similarity=0.104 Sum_probs=55.3 Q ss_pred cCCCCCc-ceEEEEEEeec-CCCCceEEEEEeCCCCe---EEEEEEEcccccCceEEEE---EEEeccCCcceeEEEeee Q FBpp0301686 80 LLPEKLY-EFAILITFRQS-SLKGGYLFSVVNPLDTV---VQLGVHLSPVVKNSYNVSL---VYTQADQNIGRKLASFGV 151 (1039) Q Consensus 80 ~fp~~~~-eFSllaT~R~~-~~~~g~LfsI~~~~d~~---~qlgL~lsg~~~~~~~i~L---~Y~~~~~~~~q~~~sF~v 151 (1039) |+.+.-+ +|.|.+-+|.. ..++|++|.+......- .-++++|....... ...+ -....++.-....+.-.. T Consensus 70 L~t~~~y~dF~L~~E~k~~~~~NSGI~~r~~~~~g~~~~~~g~E~QIlD~~~~~-~~~~g~~~~~~~GslY~~~~~~~~~ 148 (241) T 3h3l_A 70 LIYDKKFKNFVFEIEWKIDKAGNSGIFYTAQEIEGTPIYYSSPEYQLLDNENMP-DAWEGCDGNRQAGAVYDMIMPDPQP 148 (241) T ss_dssp EEESSCBSSEEEEEEEEECBTCEEEEEEEECCCTTSCGGGSSCEEEEECTTTCG-GGSSSSTTTTSTTSBTTTBCCSSCC T ss_pred EeEcCccccEEEEEEEEeCCCCCcEEEEEecCCCCCccccceEEEEEeCCCCCC-ccccccCCCCcccccccccCccccc Confidence 4444445 99999999975 56778888776532110 11344442210000 0000 000001000000001112 Q ss_pred ccCCCCceEEEEEEeCCeEEEEEccccceeee Q FBpp0301686 152 AHVPDKWNSIALQVLSDKVSFYYDCELRNTTL 183 (1039) Q Consensus 152 ~laDg~WHrlaLsV~g~~VtLyVDC~~~~t~~ 183 (1039) ....++|+++-|.|.+++|+++||-.++.... T Consensus 149 ~~p~geWN~~~I~~~g~~i~v~lNG~~V~~~~ 180 (241) T 3h3l_A 149 VKPYGNWNKTRIVVYNQRVIHYMNDVKILEFQ 180 (241) T ss_dssp CCCTTSCEEEEEEEETTEEEEEETTEEEEEEE T ss_pred cCCCCceEEEEEEEECCEEEEEECCEEEEEEe Confidence 22368999999999999999999999887643No 70>3i8t_A Galectin-4; S-type lectin, carbohydrate binding, molecular recognition, sugar binding protein; HET: LBT; 2.10A {Mus musculus} SCOP: b.29.1.0 PDB: 2dyc_A Probab=35.16 E-value=4.1e+02 Score=26.72 Aligned_cols=122 Identities=12% Similarity=0.113 Sum_probs=61.9 Q ss_pred CCCcceEEcCCcc----ccCcccccCCCCCc-ceEEEEEEeecCCCCceEEEEEeCCCCeEEEEEEEcccccCceEEEEE Q FBpp0301686 60 DGFPAFRFLQTAD----VKSPYRMLLPEKLY-EFAILITFRQSSLKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLV 134 (1039) Q Consensus 60 d~~pAy~f~~~a~----l~~pt~~~fp~~~~-eFSllaT~R~~~~~~g~LfsI~~~~d~~~qlgL~lsg~~~~~~~i~L~ 134 (1039) ..+|||....... ...|....+|..|. .=+|+++=+.......+-+.+........-+.|.++.+-+....|..- T Consensus 10 ~~~~~~~~~~~~~~~~~p~vPf~~~ip~gL~~G~~I~I~G~v~~~a~rF~Inl~~g~~~~~dIalHfnpRf~~~~~IV~N 89 (164) T 3i8t_A 10 HTDPAYVPAPGYQPTYNPTLPYKRPIPGGLSVGMSVYIQGMAKENMRRFHVNFAVGQDDGADVAFHFNPRFDGWDKVVFN 89 (164) T ss_dssp ---------------CCCCSSEEEECTTCCCTTCEEEEEEEECTTCCBEEEEEESSSSTTCCEEEEEEEECSSSCEEEEE T ss_pred cCCcccccCCCCCcccCCCCCEEeecCCCCcCCCEEEEEEEECCCCCEEEEEeccCCCCCCCEEEEEeeeeCCCCEEEEE Confidence 3578888775543 46778888888885 555555555544444566666643211224555555543211133332 Q ss_pred EEeccCCcceeEEEeeeccCCCCceEEEEEEeCCeEEEEEccccceee Q FBpp0301686 135 YTQADQNIGRKLASFGVAHVPDKWNSIALQVLSDKVSFYYDCELRNTT 182 (1039) Q Consensus 135 Y~~~~~~~~q~~~sF~v~laDg~WHrlaLsV~g~~VtLyVDC~~~~t~ 182 (1039) ....+ ...+.-.....+...|+=-.|.|.+..+...++||-....+. T Consensus 90 S~~~g-~WG~EEr~~~~PF~~G~~F~l~I~~~~~~f~V~VNg~~~~~F 136 (164) T 3i8t_A 90 TMQSG-QWGKEEKKKSMPFQKGKHFELVFMVMPEHYKVVVNGNSFYEY 136 (164) T ss_dssp EEETT-EECCCEEESCCCCCTTCEEEEEEEECSSEEEEEETTEEEEEE T ss_pred cccCC-EeCCCcccCCCCCccCCEEEEEEEEccCEEEEEECCEEEEEE Confidence 22222 111111111346667888899999999999999998876553No 71>3wvj_A Beta-glucanase; thermostability, industrial enzyme, pastoris, A classic beta-jellyroll fold, hydrolase; HET: B3P; 1.95A {Clostridium thermocellum} Probab=32.94 E-value=4.9e+02 Score=26.99 Aligned_cols=28 Identities=14% Similarity=0.290 Sum_probs=25.9 Q ss_pred CCCceEEEEEEeCCeEEEEEccccceee Q FBpp0301686 155 PDKWNSIALQVLSDKVSFYYDCELRNTT 182 (1039) Q Consensus 155 Dg~WHrlaLsV~g~~VtLyVDC~~~~t~ 182 (1039) ...||..+|....+.|++|||-+++.+. T Consensus 143 ~~~fH~Y~~~W~~~~i~~yvDg~~~~~~ 170 (220) T 3wvj_A 143 SQDFHTYGFEWRPDYIDFYVDGKKVYRG 170 (220) T ss_dssp TTSCEEEEEEEETTEEEEEETTEEEEEE T ss_pred CCCcEEEEEEEECCEEEEEECCEEEEEE Confidence 5799999999999999999999998775No 72>4jqt_A Putative glycosyl hydrolase; PF06439 family protein, DUF1080, structural genomics, joint for structural genomics, JCSG; HET: MSE; 2.49A {Bacteroides thetaiotaomicron} Probab=32.47 E-value=97 Score=36.07 Aligned_cols=99 Identities=17% Similarity=0.333 Sum_probs=57.2 Q ss_pred ccCCCCCc-ceEEEEEEeec-CCCCceEEEEEeCCC----CeEEEEEEEcccccCceEEEEEEEeccCCcceeEEEe--- Q FBpp0301686 79 MLLPEKLY-EFAILITFRQS-SLKGGYLFSVVNPLD----TVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLASF--- 149 (1039) Q Consensus 79 ~~fp~~~~-eFSllaT~R~~-~~~~g~LfsI~~~~d----~~~qlgL~lsg~~~~~~~i~L~Y~~~~~~~~q~~~sF--- 149 (1039) .++.+.-+ ||.|.+-+|.. ..++|++|......+ ...-+++++....+. .. --+|...... .+..+ T Consensus 44 ~l~t~~~y~dF~L~~e~k~~~~~NSGI~~r~~~~~~~~~~~~~gyqvqi~~~~~~-~~-g~ly~~~~~g---~l~~~~~~ 118 (431) T 4jqt_A 44 FLATTKNYGDFILEFDFKIDDGLNSGVQLRSESKKDYQNGRVHGYQFEIDPSKRA-WS-GGIYDEARRN---WLYPLTLN 118 (431) T ss_dssp EEEESSCBSSEEEEEEEEECTTCCEEEEEEEBCCTTTGGGCCBEEEEEECCSTTC-CT-TCEEEETTTE---EEECGGGS T ss_pred eEEeCCccccEEEEEEEEeCCCCceEEEEEecCcccccCCceeEEEEEEcCCCCC-Cc-CcccCcCccc---eecccccC Confidence 45555556 99999999985 467788887754211 112244555432110 00 0123221100 01101 Q ss_pred ---eeccCCCCceEEEEEEeCCeEEEEEccccceee Q FBpp0301686 150 ---GVAHVPDKWNSIALQVLSDKVSFYYDCELRNTT 182 (1039) Q Consensus 150 ---~v~laDg~WHrlaLsV~g~~VtLyVDC~~~~t~ 182 (1039) ...+-.++|+++.|.|.+++|++|||-.++... T Consensus 119 p~~~~~~~~geWn~~~I~~~g~~i~v~lNG~~v~~~ 154 (431) T 4jqt_A 119 PAAKTAFKNNAWNKARIEAIGNSIRTWINGVPCANI 154 (431) T ss_dssp GGGGGCCCTTSCEEEEEEEETTEEEEEETTEEEEEE T ss_pred chhhcccCCCCcEEEEEEEECCEEEEEECCEEEEEE Confidence 112236899999999999999999999987654No 73>1o91_A Collagen alpha 1(VIII) chain; C1Q_LIKE_domain, extracellular matrix, adhesion, connective tissue, repeat, structural protein; HET: CPS; 1.9A {Mus musculus} SCOP: b.22.1.1 Probab=32.18 E-value=12 Score=38.55 Aligned_cols=55 Identities=25% Similarity=0.349 Sum_probs=24.0 Q ss_pred CcEEecCccccccCCCCcccCCCc-eeecCCCccCCCCCCCCceEEecCCCCcccccCcccC Q FBpp0301686 898 GDVLFNSWKGIFNGQGGFFSQAPR-IYSFSGKNVMTDSTWPMKMVWHGSLPNGERSMDTYCD 958 (1039) Q Consensus 898 g~vl~~~~~~l~~~~~~~~~~~~~-i~~f~~~~~~~~~~~~~k~vW~Gs~~~g~~~~~~~C~ 958 (1039) +.|+.+.-...-. ..++|+...+ +|.|+=+-.. ..+.+|..+..++......+|+ T Consensus 70 d~v~~N~G~~yn~-~TG~FTapv~G~Y~Fs~~~~~-----~~~~~~v~L~~Ng~~~~~~~~~ 125 (178) T 1o91_A 70 DKLLYNGRQNYNP-QTGIFTCEVPGVYYFAYHVHC-----KGGNVWVALFKNNEPMMYTYDE 125 (178) T ss_dssp CEEEEEETTCEET-TTTEEECCSCEEEEEEEEEEE-----EEEEEEEEEEETTEEEEEEEEC T ss_pred CEEEEcCCCCccC-CCCeEEeeCCeEEEEEEEEEe-----CCceEEEEEEECCEEEEEEEec Confidence 3454443333332 2335555555 6655322111 1235555555565554334443No 74>1dyp_A Kappa-carrageenase; hydrolase, kappa-carrageenan double helix degradation; HET: MSE; 1.54A {Pseudoalteromonas carrageenovora} SCOP: b.29.1.2 Probab=30.78 E-value=1.1e+02 Score=33.07 Aligned_cols=29 Identities=21% Similarity=0.448 Sum_probs=26.3 Q ss_pred CCCceEEEEEEeCCeEEEEEccccceeee Q FBpp0301686 155 PDKWNSIALQVLSDKVSFYYDCELRNTTL 183 (1039) Q Consensus 155 Dg~WHrlaLsV~g~~VtLyVDC~~~~t~~ 183 (1039) ...||..+|....+.|++|||-+++.+.. T Consensus 189 ~~~fH~Y~veW~~~~I~~yvDG~~~~~~~ 217 (271) T 1dyp_A 189 RNDFHTYGVNVTKDKITWYVDGEIVGEKD 217 (271) T ss_dssp TSSCEEEEEEECSSEEEEEETTEEEEEEE T ss_pred CCCeEEEEEEEECCEEEEEECCEEEeeec Confidence 57999999999999999999999987763No 75>4qhz_A Putative glycosyl hydrolase; PF06439 family protein, DUF1080, structural genomics, joint for structural genomics, JCSG; HET: MLY; 2.13A {Parabacteroides distasonis} Probab=29.01 E-value=41 Score=36.41 Aligned_cols=92 Identities=11% Similarity=0.224 Sum_probs=52.6 Q ss_pred cccCCCCCc-ceEEEEEEeecC---------CCCceEEEEEeCCCCeEEEEEEEcccccCceEEEEEEEe--ccCCccee Q FBpp0301686 78 RMLLPEKLY-EFAILITFRQSS---------LKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQ--ADQNIGRK 145 (1039) Q Consensus 78 ~~~fp~~~~-eFSllaT~R~~~---------~~~g~LfsI~~~~d~~~qlgL~lsg~~~~~~~i~L~Y~~--~~~~~~q~ 145 (1039) ..|+...-+ +|.|.+-+|... .++|+.|.. .++++|...... . .|.. .++.-... T Consensus 86 G~L~T~~~f~dF~L~lE~k~~~~~~~~~~~~gNSGI~~r~--------~~EvQIld~~~~--~---~~~~~~~GslY~~~ 152 (246) T 4qhz_A 86 GDIQTXQXFNDFQMHIEWQVPTNITGESQSRGNSGIFLQG--------MYEVQVLDCYNN--P---TYVNGQTGSIYKQS 152 (246) T ss_dssp CCEEESSCBSSEEEEEEEECCTTCCCCGGGSSCEEEEETT--------TEEEEECCCTTC--C---CCGGGSTTCBTTTB T ss_pred ccEEeccccCcEEEEEEEEeCCcccccccCCCccEEEeCc--------eEEEEEeCCCCC--C---CCCCCceeEECccc Confidence 344444445 999999999754 567776631 156666433110 0 0110 01000000 Q ss_pred EEEeeeccCCCCceEEEEEEe------------CCeEEEEEccccceee Q FBpp0301686 146 LASFGVAHVPDKWNSIALQVL------------SDKVSFYYDCELRNTT 182 (1039) Q Consensus 146 ~~sF~v~laDg~WHrlaLsV~------------g~~VtLyVDC~~~~t~ 182 (1039) .+.-+...-.++|+++-|.|. +.+|+++||-.++... T Consensus 153 ~p~~~~~~p~GeWNt~~I~~~a~~f~~~G~~~~g~~itv~lNG~~V~~~ 201 (246) T 4qhz_A 153 IPLANAMRXPGEWNVYDIIYTAPTFKEDGSYRTHPTVTVIQNGVVLQNH 201 (246) T ss_dssp CCSCBCCCCTTSEEEEEEEEECCEECTTSSEEECCEEEEEETTEEEEEE T ss_pred CCccccccCcCcceEEEEEEEecccccccccccCCEEEEEECCEEEEEE Confidence 111112233689999999996 6899999999998654No 76>1axk_A Gluxyn-1; bifunctional, fusion protein, 1,4-beta-xylanase, 1,3-1,4-beta-glucanase, hybrid enzyme; 2.10A {Bacillus subtilis} SCOP: b.29.1.2 b.29.1.11 Probab=28.09 E-value=7.6e+02 Score=28.53 Aligned_cols=68 Identities=15% Similarity=0.271 Sum_probs=43.9 Q ss_pred CCCceEEEEEEeCCeEEEEEccccceeee--ccCCCcceeccCCeeEEEEec-----C-cccCcccccceeeeEEeeCcc Q FBpp0301686 155 PDKWNSIALQVLSDKVSFYYDCELRNTTL--VTREPIELVFDSASTLYIGQA-----G-SIIGGKFEGYLEKINVYGNPD 226 (1039) Q Consensus 155 Dg~WHrlaLsV~g~~VtLyVDC~~~~t~~--l~r~~~~l~~~~~~~l~IGq~-----g-~~~~~~F~G~LQ~L~i~~dp~ 226 (1039) ...||..+|....+.|++|||-+++.+.. ++..+..|.| .|+++.. + ......+.-.|.-|||+.... T Consensus 83 ~~~FHtY~veWtp~~I~wyVDG~~v~t~~~~~P~~P~~liL----NlwvGgg~g~W~G~p~~~~P~~m~VDyVRVYq~~~ 158 (394) T 1axk_A 83 SKGFHTYAFDWQPGYIKWYVDGVLKHTATANIPSTPGKIMM----NLWNGTGVDDWLGSYNGANPLYAEYDWVKYTSNAS 158 (394) T ss_dssp GGSCEEEEEEEETTEEEEEETTEEEEEECSSCCCSCBEEEE----EEEEBSSCHHHHCCCCCCCCEEEEEEEEEEEECCC T ss_pred CCCeEEEEEEEECCEEEEEECCEEEEEECCCCCCCCeEEEE----EEEccCCccccCCCCCCCCCeEEEEEEEEeeccCC Confidence 46899999999999999999999887752 3333333322 3455520 0 011234566788888887643No 77>2ayh_A 1,3-1,4-beta-D-glucan 4-glucanohydrolase; hydrolase (glucanase); 1.60A {Hybrid} SCOP: b.29.1.2 PDB: 1byh_A 1glh_A 1u0a_A* 1mac_A 1gbg_A Probab=26.84 E-value=4.4e+02 Score=27.18 Aligned_cols=28 Identities=18% Similarity=0.361 Sum_probs=25.7 Q ss_pred CCCceEEEEEEeCCeEEEEEccccceee Q FBpp0301686 155 PDKWNSIALQVLSDKVSFYYDCELRNTT 182 (1039) Q Consensus 155 Dg~WHrlaLsV~g~~VtLyVDC~~~~t~ 182 (1039) ...||..+|....+.|++|||-+++.+. T Consensus 141 ~~~fH~Y~~~W~~~~i~~yvDg~~~~~~ 168 (214) T 2ayh_A 141 SKGFHTYAFDWQPGYIKWYVDGVLKHTA 168 (214) T ss_dssp GGSCEEEEEEEETTEEEEEETTEEEEEE T ss_pred cCCcEEEEEEEECCEEEEEECCEEEEEE Confidence 4689999999999999999999998775No 78>3h0o_A Beta-glucanase; 1,3-1,4-beta-D-glucanase, CH-PI stacking interactions, TRIS inhibition, hydrolase, glycosidase; 1.40A {Fibrobacter succinogenes} SCOP: b.29.1.2 PDB: 1mve_A 1zm1_A* 3hr9_A 2r49_A 3axd_A 3axe_A* Probab=24.63 E-value=7.1e+02 Score=26.35 Aligned_cols=29 Identities=14% Similarity=0.170 Sum_probs=26.2 Q ss_pred CCCCceEEEEEEeCCeEEEEEccccceee Q FBpp0301686 154 VPDKWNSIALQVLSDKVSFYYDCELRNTT 182 (1039) Q Consensus 154 aDg~WHrlaLsV~g~~VtLyVDC~~~~t~ 182 (1039) ....||..+|.-..+.|++|||-+++.+. T Consensus 91 ~~~~fH~Y~ieW~~~~I~wyVDg~~~~t~ 119 (240) T 3h0o_A 91 ADQAFHTYGLEWTPNYVRWTVDGQEVRKT 119 (240) T ss_dssp TTTSCEEEEEEECSSCEEEEETTEEEEEE T ss_pred CCCCcEEEEEEEECCEEEEEECCEEEEEE Confidence 35799999999999999999999988775No 79>1ajo_A CPA16M-127, circularly permuted (1-3,1-4)-beta-D-glucan 4- glucanohydrolase CPA16M-127; glucanase, circular permutation; 2.07A {Paenibacillus macerans} SCOP: b.29.1.2 Probab=24.41 E-value=1.7e+02 Score=30.74 Aligned_cols=74 Identities=15% Similarity=0.213 Sum_probs=44.6 Q ss_pred CCCceEEEEEEeCCeEEEEEccccceeee--ccCCCcceeccCCeeEEEEec-----Cc-ccCcccccceeeeEEeeCcc Q FBpp0301686 155 PDKWNSIALQVLSDKVSFYYDCELRNTTL--VTREPIELVFDSASTLYIGQA-----GS-IIGGKFEGYLEKINVYGNPD 226 (1039) Q Consensus 155 Dg~WHrlaLsV~g~~VtLyVDC~~~~t~~--l~r~~~~l~~~~~~~l~IGq~-----g~-~~~~~F~G~LQ~L~i~~dp~ 226 (1039) ...||..+|.-..+.|++|||-+++.+.. ++..+..|. ..|+++.. +. .....++-.|.-++++.... T Consensus 15 ~~~fH~Y~~eW~~~~i~~~vDg~~~~~~~~~~P~~p~~li----lnl~~g~g~~~W~g~~~~~~p~~m~vDyVrvy~~~~ 90 (214) T 1ajo_A 15 SKGFHTYAFDWQPGYIKWYVDGVLKHTATANIPSTPGKIM----MNLWNGTGVDDWLGSYNGANPLYAEYDWVKYTSNQT 90 (214) T ss_dssp GGSCEEEEEEEETTEEEEEETTEEEEEECSSCCCSCBEEE----EEEEEBSSCHHHHCCCCCCCCEEEEEEEEEEEESST T ss_pred cCCcEEEEEEEeCCeEEEEECCEEEEEEcCCCCCCCcEEE----EEEEecCCccccCCCCCcCCCceEEEEEEEEeeccc Confidence 46899999999999999999999987753 332233332 24555510 10 01123344566677776654 Q ss_pred cccccC Q FBpp0301686 227 AINVTC 232 (1039) Q Consensus 227 ~~~~~C 232 (1039) +....| T Consensus 91 ~~~~~d 96 (214) T 1ajo_A 91 GGSFFE 96 (214) T ss_dssp TCCEEE T ss_pred cceeec Confidence 443344No 80>2cws_A Alginate lyase A1-II'; polysaccharide lyase family-7; HET: SO4; 1.00A {Sphingomonas SP} SCOP: b.29.1.0 PDB: 2z42_A 2zac_A* 2zab_A* 2zaa_A* 2za9_A Probab=23.46 E-value=7.9e+02 Score=26.27 Aligned_cols=87 Identities=6% Similarity=0.025 Sum_probs=52.8 Q ss_pred ceEEEEEEee---cCCCCceEEEEEeCCC----CeEEEEEEEcccccCceEEEEEEEecc-CCcceeEEEeeeccCCCCc Q FBpp0301686 87 EFAILITFRQ---SSLKGGYLFSVVNPLD----TVVQLGVHLSPVVKNSYNVSLVYTQAD-QNIGRKLASFGVAHVPDKW 158 (1039) Q Consensus 87 eFSllaT~R~---~~~~~g~LfsI~~~~d----~~~qlgL~lsg~~~~~~~i~L~Y~~~~-~~~~q~~~sF~v~laDg~W 158 (1039) .-.|.+|++. .....-+|-+|....+ +...|.|.... + .|.+.|+... .... ......-.+..++| T Consensus 88 ~~~l~atl~V~~Vp~~~~VvIgQIH~~~~~~~~~~pllklyy~~---G--~i~~~~~~~~~~~~~-~~~~~~~~i~lg~~ 161 (237) T 2cws_A 88 THTMKLSGKTVQLPSSGKIIVAQIHGIMDDGTNAPPLVKAVFQD---G--QLDMQVKQNSDGTGS-DVHNYFTGIKLGDL 161 (237) T ss_dssp EEEEEEEEEEEECCTTCCEEEEEEEEECTTSCEEEEEEEEEEET---T--EEEEEEESCSSSCSC-EECCEEETCCTTCC T ss_pred CeeEEEEEEEEecCCCCCEEEEEEecCCCCCCCCCceEEEEEeC---C--eEEEEEEecCCCCCc-ceeEeecCccCCCE Confidence 5688888884 2333345777776532 15667776652 1 4666665321 1111 11111224456789 Q ss_pred eEEEEEEeCCeEEEEEccccc Q FBpp0301686 159 NSIALQVLSDKVSFYYDCELR 179 (1039) Q Consensus 159 HrlaLsV~g~~VtLyVDC~~~ 179 (1039) =++.|.|.++.+++++|-+.. T Consensus 162 F~y~I~v~~g~l~V~ing~~~ 182 (237) T 2cws_A 162 YNMEIRVTDGVAYVTMNGDTR 182 (237) T ss_dssp EEEEEEEETTEEEEEETTEEE T ss_pred EEEEEEEeCCEEEEEEcCcEe Confidence 999999999999999998664No 81>3iln_A Laminarinase; jelly ROW, hydrolase, family 16 glycosyl hydrolase; 1.95A {Rhodothermus marinus} Probab=23.46 E-value=6.5e+02 Score=26.56 Aligned_cols=34 Identities=12% Similarity=0.238 Sum_probs=28.5 Q ss_pred eeeccCCCCceEEEEEEeCCeEEEEEccccceee Q FBpp0301686 149 FGVAHVPDKWNSIALQVLSDKVSFYYDCELRNTT 182 (1039) Q Consensus 149 F~v~laDg~WHrlaLsV~g~~VtLyVDC~~~~t~ 182 (1039) +........||..+|....+.|++|||-+++.+. T Consensus 158 ~~~~~~~~~fH~Y~~eW~~~~I~~~vDg~~~~~~ 191 (251) T 3iln_A 158 IRVPTARTDFHVYAIEWTPEEIRWFVDDSLYYRF 191 (251) T ss_dssp EECTTTTTSCEEEEEEECSSEEEEEETTEEEEEE T ss_pred EeCCCCCCCCEEEEEEEECCEEEEEECCEEEEEE Confidence 3444556799999999999999999999987765No 82>3i4i_A 1,3-1,4-beta-glucanase; beta-sandwich, hydrolase; 1.89A {Uncultured murine large bowel bacteriuorganism_taxid} SCOP: b.29.1.2 Probab=23.32 E-value=6.2e+02 Score=26.60 Aligned_cols=28 Identities=11% Similarity=0.175 Sum_probs=25.9 Q ss_pred CCCceEEEEEEeCCeEEEEEccccceee Q FBpp0301686 155 PDKWNSIALQVLSDKVSFYYDCELRNTT 182 (1039) Q Consensus 155 Dg~WHrlaLsV~g~~VtLyVDC~~~~t~ 182 (1039) ...||..+|....+.|++|||-+++.+. T Consensus 161 ~~~fH~Y~ieW~~~~I~~yvDg~~~~~~ 188 (234) T 3i4i_A 161 SEDFHIYAFNWQPNYIAWLVDGEEVYRA 188 (234) T ss_dssp TTSCEEEEEEEETTEEEEEETTEEEEEE T ss_pred CCCcEEEEEEEECCEEEEEECCEEEEEE Confidence 5799999999999999999999988775No 83>3o5s_A Beta-glucanase; glycosyl hydrolase, beta-jelly roll, hydrolase; HET: B3P; 2.20A {Bacillus subtilis} SCOP: b.29.1.2 PDB: 3d6e_A Probab=22.61 E-value=5e+02 Score=27.46 Aligned_cols=28 Identities=18% Similarity=0.488 Sum_probs=25.7 Q ss_pred CCCceEEEEEEeCCeEEEEEccccceee Q FBpp0301686 155 PDKWNSIALQVLSDKVSFYYDCELRNTT 182 (1039) Q Consensus 155 Dg~WHrlaLsV~g~~VtLyVDC~~~~t~ 182 (1039) ...||..+|....+.|++|||-+++.+. T Consensus 165 ~~~fH~Y~~eW~~~~I~~yvDg~~~~~~ 192 (238) T 3o5s_A 165 ANAYHTYAFDWQPNSIKWYVDGQLKHTA 192 (238) T ss_dssp GGSCEEEEEEECSSCEEEEETTEEEEEE T ss_pred CCCCEEEEEEEECCEEEEEECCEEEEEE Confidence 4689999999999999999999988775No 84>4bpz_A Endo-1,3-beta-glucanase, family GH16; hydrolase, marine laminarinase; HET: GLC BGC; 1.13A {Zobellia galactanivorans} PDB: 4bow_A* 4bq1_A Probab=22.09 E-value=8.2e+02 Score=25.98 Aligned_cols=32 Identities=9% Similarity=0.196 Sum_probs=27.4 Q ss_pred eccCCCCceEEEEEEeCCeEEEEEccccceee Q FBpp0301686 151 VAHVPDKWNSIALQVLSDKVSFYYDCELRNTT 182 (1039) Q Consensus 151 v~laDg~WHrlaLsV~g~~VtLyVDC~~~~t~ 182 (1039) +......||..+|....+.|++|||-+++.+. T Consensus 179 ~~~~~~~fH~Y~~eW~~~~I~~yvDg~~~~~~ 210 (256) T 4bpz_A 179 ITNASGSFHVYSLEWNASAMKVFLDDTLVYEL 210 (256) T ss_dssp CSCTTTSCEEEEEEECSSEEEEEETTEEEEEE T ss_pred cCCCCCCCEEEEEEEECCEEEEEECCeEEEEe Confidence 34456799999999999999999999987765No 85>3wv6_A Galectin-9; beta sandwich, carbohydrate-binding, oligosaccharide, sugar protein; HET: GAL BGC GLC; 1.95A {Homo sapiens} Probab=21.37 E-value=9.4e+02 Score=26.38 Aligned_cols=105 Identities=12% Similarity=0.085 Sum_probs=64.0 Q ss_pred cccCcccccCCCCCc-ceEEEEEEeecCCCCceEEEEEeCCCCeEEEEEEEcccccCceEEEEEEEeccCCcc-eeEEE- Q FBpp0301686 72 DVKSPYRMLLPEKLY-EFAILITFRQSSLKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIG-RKLAS- 148 (1039) Q Consensus 72 ~l~~pt~~~fp~~~~-eFSllaT~R~~~~~~g~LfsI~~~~d~~~qlgL~lsg~~~~~~~i~L~Y~~~~~~~~-q~~~s- 148 (1039) .+..|....+|..|. .=+|+++=++......+-+.+.... .+.|.++.+-+. ..|..-....+ ... ++... T Consensus 163 ~~~vPf~~~lp~gl~~G~~i~I~G~~~~~~~~F~Inl~~~~----dialHfnpRf~~-~~iV~Ns~~~g-~Wg~Eer~~~ 236 (296) T 3wv6_A 163 AYPMPFITTILGGLYPSKSILLSGTVLPSAQSFHINLCSGN----HIAFHLNPRFDE-NAVVRNTQIDN-SWGSEERSLP 236 (296) T ss_dssp CCCSSEEEECTTCCCTTCEEEEEEEECTTCCBEEEEEEETT----EEEEEEEEETTT-TEEEEEEEETT-EECCCBCCCS T ss_pred ccccCeeeeeCccccCCCEEEEEEEecCCCceEEEEecCCC----CEEEEEeEecCC-CEEEEeCccCC-eeCccccccc Confidence 456788888888885 5555555555444445666676642 567777776432 23332222222 111 11110 Q ss_pred eeeccCCCCceEEEEEEeCCeEEEEEccccceee Q FBpp0301686 149 FGVAHVPDKWNSIALQVLSDKVSFYYDCELRNTT 182 (1039) Q Consensus 149 F~v~laDg~WHrlaLsV~g~~VtLyVDC~~~~t~ 182 (1039) -..+...|+--.|.|.+..+...++||-....+. T Consensus 237 ~~~PF~~G~~F~l~i~~~~~~f~V~vng~~~~~F 270 (296) T 3wv6_A 237 RKMPFVRGQSFSVWILCEAHCLKVAVDGQHLFEY 270 (296) T ss_dssp SSCCCCTTCEEEEEEEECSSEEEEEETTEEEEEE T ss_pred CCCCccCCCeEEEEEEECCCEEEEEECCEEEEEe Confidence 1345567899999999999999999998877543No 86>2uwa_A Cellulase; glycoside hydrolase, xyloglucan-endo-transferase, hydrolase, glycosidase, family GH16, tropaeolum majus xyloglucanase; 1.8A {Tropaeolum majus} SCOP: b.29.1.0 PDB: 2uwc_A 2uwb_A 2vh9_A* Probab=21.35 E-value=9e+02 Score=26.17 Aligned_cols=75 Identities=12% Similarity=0.173 Sum_probs=47.1 Q ss_pred CCCceEEEEEEeCCeEEEEEccccceeee------ccCCCcceeccCCeeEEEEec-----C--cc--cCcccccceeee Q FBpp0301686 155 PDKWNSIALQVLSDKVSFYYDCELRNTTL------VTREPIELVFDSASTLYIGQA-----G--SI--IGGKFEGYLEKI 219 (1039) Q Consensus 155 Dg~WHrlaLsV~g~~VtLyVDC~~~~t~~------l~r~~~~l~~~~~~~l~IGq~-----g--~~--~~~~F~G~LQ~L 219 (1039) ...||..+|....+.|++|||-+++.+.. ++..+..|. ..|++|.. + .+ ....|.-.|..| T Consensus 141 ~~~fHtY~ieWtp~~I~~yVDg~~v~~~~~~~~~~~P~~Pm~ii----lnlw~gg~Wa~~gG~~~~d~~~~P~~m~vd~V 216 (274) T 2uwa_A 141 TQDYHNYAIYWTPSEIIFFVDDVPIRRYPRKSDATFPLRPLWVY----GSVWDASSWATENGKYKADYRYQPFVGKYEDF 216 (274) T ss_dssp TSSCEEEEEEECSSEEEEEETTEEEEEEECCCGGGSCCSCEEEE----EEEEECTTTTBGGGTBCCCGGGCCEEEEEEEE T ss_pred CCCcEEEEEEEccCeEEEEECCEEEEEEccccccCCCCCccEEE----EeeEecCCccccCCccccCCccCCEEEEEEEE Confidence 57999999999999999999999887652 221122221 23444432 1 01 123467788899 Q ss_pred EEeeCcccccccCC Q FBpp0301686 220 NVYGNPDAINVTCM 233 (1039) Q Consensus 220 ~i~~dp~~~~~~C~ 233 (1039) +|+.-.......|. T Consensus 217 rV~~~~~~~~~~C~ 230 (274) T 2uwa_A 217 KLGSCTVEAASSCN 230 (274) T ss_dssp EEEEEETTSCTTCC T ss_pred EEEecCCCCCCCcC Confidence 99865544445564