Query FBpp0308935 type=protein; loc=3L:join(7019749..7019898,7034972..7035038,7035170..7035315,7035744..7035881,7038005..7038151,7041018..7041131,7043466..7043720,7044926..7045003,7045109..7045355,7045534..7045611,7046334..7046488,7046586..7046678,7048842..7048964,7050565..7050695,7051242..7051421,7051486..7051722,7051977..7052052); ID=FBpp0308935; name=Mp-PS; parent=FBgn0260660,FBtr0339903; dbxref=GB_protein:AHN57985,REFSEQ:NP_001286960,FlyBase:FBpp0308935,FlyBase_Annotation_IDs:CG42543-PS; MD5=ed0901aea9a341f7a0056f6887e2dbf6; length=804; release=r6.06; species=Dmel; Match_columns 804 No_of_seqs 665 out of 2589 Neff 5.9 Searched_HMMs 35384 No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 1dy2_A Collagen alpha1(XV) cha 100.0 9.2E-63 2.6E-67 482.4 13.2 174 591-768 3-177 (180) 2 1koe_A Endostatin; angiogenesi 100.0 1.5E-62 4.2E-67 484.7 12.8 170 595-764 1-171 (172) 3 3hsh_A Endostatin, collagen al 99.7 2.5E-17 7.1E-22 133.6 4.4 54 511-564 2-55 (56) 4 3n3f_A Collagen alpha-1(XV) ch 99.7 6.7E-17 1.9E-21 130.2 5.0 52 513-564 2-53 (54) 5 4ae2_A Procollagen III, collag 92.1 0.023 6.5E-07 60.2 -1.2 40 446-485 18-57 (256) 6 1pwb_A SP-D, PSP-D, pulmonary 90.0 0.016 4.4E-07 56.3 -4.6 31 451-482 28-58 (177) 7 1ei8_A Collagen-like peptide ( 85.6 1.4 3.9E-05 31.3 4.4 9 95-103 16-24 (29) 8 1pwb_A SP-D, PSP-D, pulmonary 82.2 0.32 9.2E-06 46.9 0.0 12 749-760 164-175 (177) 9 2dpr_A Conantokin-T, CON-T; co 64.3 3.4 9.5E-05 26.3 1.3 12 792-803 2-13 (21) 10 1buu_A Protein (mannose-bindin 38.3 8.1 0.00023 37.2 0.0 12 749-760 153-164 (168) 11 1o91_A Collagen alpha 1(VIII) 35.1 9.7 0.00028 37.9 0.0 55 663-723 70-125 (178) 12 2ljw_A ALR2454 protein; novel 21.1 47 0.0013 30.7 1.8 14 790-803 45-58 (110)No 1>1dy2_A Collagen alpha1(XV) chain; angiogenesis inhibitor; 2.0A {Mus musculus} SCOP: d.169.1.5 Probab=100.00 E-value=9.2e-63 Score=482.43 Aligned_cols=174 Identities=51% Similarity=0.964 Sum_probs=164.3 Q ss_pred CCCCCCceEEEEccCCCCCCCCccchhhHHHHHHHhhcCCCCceeEEEeccccCcccccCCCCC-CCccccCCCcEEecC Q FBpp0308935 591 PLLNTPTLRVAALNEPSTGDLQGIRGADFACYRQGRRAGLLGTFKAFLSSRVQNLDTIVRPADR-DLPVVNTRGDVLFNS 669 (804) Q Consensus 591 ~~~~~~~l~l~aln~~~~G~lgGi~GAD~~C~~~A~~~g~~gt~rA~Ls~~~~~~~~~V~~~dr-~~P~vn~~g~vl~~~ 669 (804) ....+|+|||||||+|++|||+ ||++||+|||++|++||||||||+++||+++||+++|| ++||||+||+|||+| T Consensus 3 ~~~~~~~L~lvALN~P~sG~m~----AD~~C~~qAraaGl~gTfRAfLSs~~qdl~~iV~~~DR~~~PivNlkGevLf~s 78 (180) T 1dy2_A 3 LAYERPVLHLVALNTPVAGDIR----ADFQCFQQARAAGLLSTFRAFLSSHLQDLSTVVRKAERFGLPIVNLKGQVLFNN 78 (180) T ss_dssp ----CCCEEEEECSSCBCSBCC----HHHHHHHHHHHTTCCSCEEESSCBTTBCGGGSSCGGGSSSCCEECTTSCEEESC T ss_pred ccCCCccEEEEEcCCCCCCCch----HHHHHHHHHHHhCCCCceEEEeecccccCccccCHhHcCCCCeEcCCCCEEecC Confidence 3456899999999999999999 99999999999999999999999999999999999999 799999999999999 Q ss_pred cchhccCCCCcccCCCceeccCCCccCCCCCCCCceEEEecCCCCccccCccCCccccCCCCceeecccCCccccccccc Q FBpp0308935 670 WKGIFNGQGGFFSQAPRIYSFSGKNVMTDSTWPMKMVWHGSLPNGERSMDTYCDAWHSGDHLKGSFASNLDGHKLLEQKR 749 (804) Q Consensus 670 ~~~l~~~~~~~~~~~~~i~~f~~~~v~~d~~~~~k~vWtGs~~~g~~~~~~~C~~W~s~~~~~~G~as~~~~~~l~~~~~ 749 (804) |++||++++++|+.+.+||+||+||||+|++||+|.|||||++||++.+++||++|||++.+++|+||+|.+++||.|+. T Consensus 79 w~~lf~g~~~~l~~~~~Iysfdg~dVl~d~~wP~K~vWhGS~~~G~r~~d~~C~~W~s~~~~~~G~Assl~~g~ll~q~~ 158 (180) T 1dy2_A 79 WDSIFSGDGGQFNTHIPIYSFDGRDVMTDPSWPQKVVWHGSNPHGVRLVDKYCEAWRTTDMAVTGFASPLSTGKILDQKA 158 (180) T ss_dssp SGGGGSSSCCBCCTTSCCBBTTSCBTTTCTTCSSCEEECCBCTTSCBCTTSBHHHHBCCCTTCEEEEEEGGGTBSSCCEE T ss_pred HHHHhCCCCCccCCCCCeeccCCcccccCCCccccccccCCCCCCCCcccccccCCccCCCCceEeeeecCCCCcccCcc Confidence 99999999889999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred cccccCceEEEEecccHHH Q FBpp0308935 750 QSCDSKLIILCVEALSQDR 768 (804) Q Consensus 750 ~~C~~~~~vlCvE~~~~~~ 768 (804) ++|+++||||||||+.... T Consensus 159 ~sC~~~~ivLCIEn~~~~~ 177 (180) T 1dy2_A 159 YSCANRLIVLCIENSFMTD 177 (180) T ss_dssp EETTSCBBCEEEECCC--- T ss_pred cCCCCceEEEEEEcccccc Confidence 9999999999999986544No 2>1koe_A Endostatin; angiogenesis inhibitor, collagen XVIII, non-collageneous domain, heparin-binding domain; 1.50A {Mus musculus} SCOP: d.169.1.5 PDB: 1dy0_A 1dy1_A 1bnl_A Probab=100.00 E-value=1.5e-62 Score=484.71 Aligned_cols=170 Identities=48% Similarity=0.921 Sum_probs=166.5 Q ss_pred CCceEEEEccCCCCCCCCccchhhHHHHHHHhhcCCCCceeEEEeccccCcccccCCCCC-CCccccCCCcEEecCcchh Q FBpp0308935 595 TPTLRVAALNEPSTGDLQGIRGADFACYRQGRRAGLLGTFKAFLSSRVQNLDTIVRPADR-DLPVVNTRGDVLFNSWKGI 673 (804) Q Consensus 595 ~~~l~l~aln~~~~G~lgGi~GAD~~C~~~A~~~g~~gt~rA~Ls~~~~~~~~~V~~~dr-~~P~vn~~g~vl~~~~~~l 673 (804) +|+|||||||+||+|||+||+|||++||+||+++|++||||||||+++|++++||+++|| ++||||+||||||+||+|| T Consensus 1 ~~~l~lvaln~p~~GnlgGi~GAD~~C~~~A~aaGl~gtfRAfLSs~~q~~~~iV~~~dr~~~P~vN~kg~vl~~~~~~l 80 (172) T 1koe_A 1 QPVLHLVALNTPLSGGMRGIRGADFQCFQQARAVGLSGTFRAFLSSRLQDLYSIVRRADRGSVPIVNLKDEVLSPSWDSL 80 (172) T ss_dssp CCCEEEEECSSCBCSCSSHHHHHHHHHHHHHHHTTCCSCEEESCCBTTBCGGGGSCGGGTTTCCEECTTCCEEESCHHHH T ss_pred CCceEEEEeCCCcCCCcccchhHHHHHHHHHHhcCCCCeeEEEEEcccCCccceeccccccCCCeECCcCcEEeCCHHHh Confidence 478999999999999999999999999999999999999999999999999999999999 7999999999999999999 Q ss_pred ccCCCCcccCCCceeccCCCccCCCCCCCCceEEEecCCCCccccCccCCccccCCCCceeecccCCccccccccccccc Q FBpp0308935 674 FNGQGGFFSQAPRIYSFSGKNVMTDSTWPMKMVWHGSLPNGERSMDTYCDAWHSGDHLKGSFASNLDGHKLLEQKRQSCD 753 (804) Q Consensus 674 ~~~~~~~~~~~~~i~~f~~~~v~~d~~~~~k~vWtGs~~~g~~~~~~~C~~W~s~~~~~~G~as~~~~~~l~~~~~~~C~ 753 (804) |++++++|+++..||+||+||||+|++||+|+|||||++||++..++||++|||++.+++|+||+|++++||.|+.++|+ T Consensus 81 ~~~~~~~~~~~~~i~sfn~~dvl~d~~wp~k~vWtGs~~~G~~~~~~~C~~Wts~~~~~~G~assl~~~~ll~q~~~sCs 160 (172) T 1koe_A 81 FSGSQGQLQPGARIFSFDGRDVLRHPAWPQKSVWHGSDPSGRRLMESYCETWRTETTGATGQASSLLSGRLLEQKAASCH 160 (172) T ss_dssp TSSSCSBCCTTCCCBBTTSCBTTTCTTSSSCEEECCBCTTSCBCTTSBHHHHTCCCTTCEEEEEEGGGTBSCCCEEEETT T ss_pred cCCCCccccCCCceEccCCCccccCCCCccceeEECCCCCCcCcCCCcccCCcCCCCCceEeeccCCCCCcccCcCCCcC Confidence 99998899999999999999999999999999999999999998899999999999999999999999999999999999 Q ss_pred cCceEEEEecc Q FBpp0308935 754 SKLIILCVEAL 764 (804) Q Consensus 754 ~~~~vlCvE~~ 764 (804) ++|+||||||+ T Consensus 161 ~~~~vLCIE~~ 171 (172) T 1koe_A 161 NSYIVLCIENS 171 (172) T ss_dssp SCBBCEEEECC T ss_pred CCcEEEEEeec Confidence 99999999996No 3>3hsh_A Endostatin, collagen alpha-1(XVIII) chain; extracellular matrix, basement membrane, collagen trimerization domain, folding, association; 1.80A {Homo sapiens} PDB: 3hon_A Probab=99.67 E-value=2.5e-17 Score=133.55 Aligned_cols=54 Identities=26% Similarity=0.462 Sum_probs=51.8 Q ss_pred cCceeeeccHHHHhhcccCCCCCceEEEecceeEEEEEcCCchhcccCcccccC Q FBpp0308935 511 VPGAVTFQNIDEMTKKSALNPPGTLAYITEEEALLVRVNKGWQYIALGTLVPIA 564 (804) Q Consensus 511 ~~G~~~~~t~~~m~~~~~~s~~Gtlayv~d~~~l~vrv~~Gw~~i~lg~~~~~~ 564 (804) ..|+++|+|+++|++.++.++||||||++|+++|||||+||||+|||+.++|++ T Consensus 2 s~gv~~~~t~~~ml~~~~~~~eGtL~yv~d~~eLyiRVr~Gwr~V~Lg~~~pip 55 (56) T 3hsh_A 2 SSGVRLWATRQAMLGQVHEVPEGWLIFVAEQEELYVRVQNGFRKVQLEARTPLP 55 (56) T ss_dssp BCCEEEESSHHHHHHHGGGSCTTCEEEETTTTEEEEEETTEEEEECEEEEEECC T ss_pred CCcEEEEecHHHHHhhCccCCCeEEEEEEecceEEEEEcCcEEEEeecccccCC Confidence 357899999999999999999999999999999999999999999999999986No 4>3n3f_A Collagen alpha-1(XV) chain; extracellular matrix, basement membrane, collagen trimerization domain, folding, association, chain selection helix; 2.00A {Homo sapiens} Probab=99.65 E-value=6.7e-17 Score=130.24 Aligned_cols=52 Identities=35% Similarity=0.742 Sum_probs=49.8 Q ss_pred ceeeeccHHHHhhcccCCCCCceEEEecceeEEEEEcCCchhcccCcccccC Q FBpp0308935 513 GAVTFQNIDEMTKKSALNPPGTLAYITEEEALLVRVNKGWQYIALGTLVPIA 564 (804) Q Consensus 513 G~~~~~t~~~m~~~~~~s~~Gtlayv~d~~~l~vrv~~Gw~~i~lg~~~~~~ 564 (804) ++++|+|+++|++.++.+++|||||++|+++|||||+||||+||||+++|++ T Consensus 2 ~v~~~~t~~~M~~~~~~~~eGtL~yv~d~~eLyiRVr~Gwr~V~Lg~~ip~p 53 (54) T 3n3f_A 2 LVTAFSNMDDMLQKAHLVIEGTFIYLRDSTEFFIRVRDGWKKLQLGELIPIP 53 (54) T ss_dssp CEEEESSHHHHHTTGGGSCTTEEEEETTTTEEEEEETTEEEECCCCCCCCCC T ss_pred CcEEEecHHHHHhhCccCCCeEEEEEEecceEEEEEcCceeeeeecccccCC Confidence 4789999999999999999999999999999999999999999999999864No 5>4ae2_A Procollagen III, collagen alpha-1(III) chain; structural protein, fibrillar collagen, extracellular matrix fibrosis; 1.68A {Homo sapiens} PDB: 4aej_A* 4ak3_A Probab=92.06 E-value=0.023 Score=60.20 Aligned_cols=40 Identities=18% Similarity=0.258 Sum_probs=15.6 Q ss_pred CCCCCCcHHHHHHHHHHHhhhcCCCCCCCCCCCCCCCCCc Q FBpp0308935 446 RPGARSSLDELKALRELQDLRDRPDGTAEPPRQPGHSHKH 485 (804) Q Consensus 446 ~~g~~~v~~sLksL~~iqel~r~P~Gt~~~PartC~d~~~ 485 (804) ..++.+++++|++|+++++.+++|+||+.+|+|+|+|+.. T Consensus 18 ~~~~~~i~~~l~~l~~~i~~~~~p~Gt~~~p~rtC~dl~~ 57 (256) T 4ae2_A 18 KINTDEIMTSLKSVNGQIESLISPDGSRKNPARNCRDLKF 57 (256) T ss_dssp -----------------------CCSSSSSCBSCHHHHHH T ss_pred ccccHHHHHHHHHHHHHHHhhhcCCCcccCCccCHHHHHH Confidence 3456689999999999999999999999999999999754No 6>1pwb_A SP-D, PSP-D, pulmonary surfactant-associated protein D; collectin, C-type lectin, alpha-helical coiled coil, carbohydrate recognition domain; HET: GLC; 1.40A {Homo sapiens} SCOP: d.169.1.1 h.1.1.1 PDB: 1pw9_A* 3ikn_A* 3ikp_A* 3ikq_A* 3ikr_A* 4e52_A* 2rie_A* 2ggx_A* 2ggu_A* 2ork_A* 2orj_A* 2ria_A* 2rib_A* 2ric_A* 2rid_A* 2os9_A* 3dbz_A 3g81_A* 3g83_A* 1b08_A ... Probab=89.98 E-value=0.016 Score=56.28 Aligned_cols=31 Identities=10% Similarity=-0.104 Sum_probs=19.5 Q ss_pred CcHHHHHHHHHHHhhhcCCCCCCCCCCCCCCC Q FBpp0308935 451 SSLDELKALRELQDLRDRPDGTAEPPRQPGHS 482 (804) Q Consensus 451 ~v~~sLksL~~iqel~r~P~Gt~~~PartC~d 482 (804) .+...|.+|+.+++.++.+..++.+++ +|++ T Consensus 28 ~l~~~l~~l~~~l~~l~~~~~~~~~~~-~C~~ 58 (177) T 1pwb_A 28 SLRQQVEALQGQVQHLQAAFSQYKKVE-LFPN 58 (177) T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH-HTTT T ss_pred chhhhhhHHHHHHHHHHHHHHhhcccc-cCCC Confidence 455677777776666666666655553 7775No 7>1ei8_A Collagen-like peptide (Pro-HYP-Gly)4-PG-(Pro-HYP- Gly)5; triple helix, contractIle protein; 2.00A {Synthetic} SCOP: k.3.1.1 Probab=85.60 E-value=1.4 Score=31.29 Aligned_cols=9 Identities=100% Similarity=2.416 Sum_probs=3.2 Q ss_pred CCCCCCCCC Q FBpp0308935 95 PGPPGPPGP 103 (804) Q Consensus 95 pGPpGp~Gp 103 (804) +|++|++|+ T Consensus 16 pG~~G~pG~ 24 (29) T 1ei8_A 16 PGPPGPPGP 24 (29) T ss_dssp CCCCCCCCC T ss_pred CCCCCCCCC Confidence 333333333No 8>1pwb_A SP-D, PSP-D, pulmonary surfactant-associated protein D; collectin, C-type lectin, alpha-helical coiled coil, carbohydrate recognition domain; HET: GLC; 1.40A {Homo sapiens} SCOP: d.169.1.1 h.1.1.1 PDB: 1pw9_A* 3ikn_A* 3ikp_A* 3ikq_A* 3ikr_A* 4e52_A* 2rie_A* 2ggx_A* 2ggu_A* 2ork_A* 2orj_A* 2ria_A* 2rib_A* 2ric_A* 2rid_A* 2os9_A* 3dbz_A 3g81_A* 3g83_A* 1b08_A ... Probab=82.16 E-value=0.32 Score=46.91 Aligned_cols=12 Identities=25% Similarity=0.952 Sum_probs=9.5 Q ss_pred ccccccCceEEE Q FBpp0308935 749 RQSCDSKLIILC 760 (804) Q Consensus 749 ~~~C~~~~~vlC 760 (804) ..+|+.++..+| T Consensus 164 d~~C~~~~~~iC 175 (177) T 1pwb_A 164 DRACGEKRLVVC 175 (177) T ss_dssp EECTTSEEEEEE T ss_pred CccCCCCeeEEE Confidence 367888888888No 9>2dpr_A Conantokin-T, CON-T; conantoxin, nmdar antagonist, GLA-containing, metal B protein; HET: CGU; 1.70A {Conus tulipa} PDB: 1ont_A* Probab=64.27 E-value=3.4 Score=26.31 Aligned_cols=12 Identities=50% Similarity=0.717 Sum_probs=10.7 Q ss_pred hHHHHHHHHhhh Q FBpp0308935 792 ADEYAAHLENLL 803 (804) Q Consensus 792 ~~~~~~~~~~~~ 803 (804) |+||++.||+|. T Consensus 2 eeeyqemlenlr 13 (21) T 2dpr_A 2 EEEYQEMLENLR 13 (26) T ss_dssp CHHHHHHHHHHH T ss_pred cHHHHHHHHHHH Confidence 689999999985No 10>1buu_A Protein (mannose-binding protein A); lectin, HOST defense, metalloprotein, sugar binding protein; 1.90A {Rattus norvegicus} SCOP: d.169.1.1 h.1.1.1 Probab=38.30 E-value=8.1 Score=37.23 Aligned_cols=12 Identities=25% Similarity=0.656 Sum_probs=10.1 Q ss_pred ccccccCceEEE Q FBpp0308935 749 RQSCDSKLIILC 760 (804) Q Consensus 749 ~~~C~~~~~vlC 760 (804) ..+|+.++..+| T Consensus 153 d~~C~~~~~~IC 164 (168) T 1buu_A 153 DISCQASHTAVC 164 (168) T ss_dssp EECTTSCEEEEE T ss_pred CcCCCCCeeEEE Confidence 368999999999No 11>1o91_A Collagen alpha 1(VIII) chain; C1Q_LIKE_domain, extracellular matrix, adhesion, connective tissue, repeat, structural protein; HET: CPS; 1.9A {Mus musculus} SCOP: b.22.1.1 Probab=35.07 E-value=9.7 Score=37.88 Aligned_cols=55 Identities=27% Similarity=0.393 Sum_probs=27.5 Q ss_pred CcEEecCcchhccCCCCcccCCCc-eeccCCCccCCCCCCCCceEEEecCCCCccccCccCC Q FBpp0308935 663 GDVLFNSWKGIFNGQGGFFSQAPR-IYSFSGKNVMTDSTWPMKMVWHGSLPNGERSMDTYCD 723 (804) Q Consensus 663 g~vl~~~~~~l~~~~~~~~~~~~~-i~~f~~~~v~~d~~~~~k~vWtGs~~~g~~~~~~~C~ 723 (804) +.|+.|.-... +..-++|+...+ +|.|+=+- .. ..+.+|..+..++......+|+ T Consensus 70 d~v~~N~G~~y-n~~TG~FTapv~G~Y~Fs~~~-~~----~~~~~~v~L~~Ng~~~~~~~~~ 125 (178) T 1o91_A 70 DKLLYNGRQNY-NPQTGIFTCEVPGVYYFAYHV-HC----KGGNVWVALFKNNEPMMYTYDE 125 (178) T ss_dssp CEEEEEETTCE-ETTTTEEECCSCEEEEEEEEE-EE----EEEEEEEEEEETTEEEEEEEEC T ss_pred CEEEEcCCCCc-cCCCCeEEeeCCeEEEEEEEE-Ee----CCceEEEEEEECCEEEEEEEec Confidence 45555544433 333346776666 67663221 11 1245666666666654444443No 12>2ljw_A ALR2454 protein; novel fold, structural genomics, northeast structural genomi consortium, NESG, PSI-biology, protein structure initiative function; NMR {Nostoc SP} Probab=21.13 E-value=47 Score=30.74 Aligned_cols=14 Identities=29% Similarity=0.584 Sum_probs=12.3 Q ss_pred cChHHHHHHHHhhh Q FBpp0308935 790 KTADEYAAHLENLL 803 (804) Q Consensus 790 ~~~~~~~~~~~~~~ 803 (804) +||.||.+||+.+. T Consensus 45 lsE~eY~~hL~~Va 58 (110) T 2ljw_A 45 MNETEYQEHLDSVA 58 (110) T ss_dssp SCHHHHHHHHHHHH T ss_pred CCHHHHHHHHHHHH Confidence 79999999999763