Query FBpp0308936 type=protein; loc=3L:join(7012190..7012289,7012739..7013277,7033869..7033964,7034503..7034538,7034635..7034703,7034972..7035038,7035170..7035315,7035744..7035881,7038005..7038151,7041018..7041131,7043466..7043720,7044926..7045003,7045109..7045355,7046334..7046488,7046586..7046678,7048842..7048964,7049550..7049576,7050173..7050187,7050565..7050695,7051242..7051421,7051486..7051722,7051977..7052052); ID=FBpp0308936; name=Mp-PT; parent=FBgn0260660,FBtr0339904; dbxref=GB_protein:AHN57986,REFSEQ:NP_001286961,FlyBase:FBpp0308936,FlyBase_Annotation_IDs:CG42543-PT; MD5=a6b336b7c94fd4327eae15dd7a2ee72d; length=1022; release=r6.06; species=Dmel; Match_columns 1022 No_of_seqs 775 out of 2754 Neff 6.4 Searched_HMMs 35384 No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 1dy2_A Collagen alpha1(XV) cha 100.0 2.3E-62 6.5E-67 488.9 13.0 169 814-986 8-177 (180) 2 1koe_A Endostatin; angiogenesi 100.0 6.8E-62 1.9E-66 490.8 12.4 168 815-982 3-171 (172) 3 2uur_A Collagen alpha-1(IX) ch 100.0 2.4E-33 6.7E-38 303.8 19.3 195 34-238 29-235 (245) 4 2erf_A Thrombospondin-1; TSP-1 100.0 1.1E-31 3.1E-36 284.2 16.4 194 34-234 2-209 (209) 5 3hqv_A Collagen alpha-1(I) cha 100.0 3.5E-29 9.8E-34 315.1 40.7 32 653-684 997-1028(1056) 6 3hqv_B Collagen alpha-2(I) cha 100.0 7.4E-29 2.1E-33 311.5 39.9 9 675-683 1014-1022(1028) 7 1za4_A Thrombospondin 1; TSP-1 100.0 1.6E-30 4.6E-35 282.5 16.9 195 34-237 12-222 (251) 8 3hsh_A Endostatin, collagen al 99.6 2.5E-15 7E-20 123.9 4.6 53 716-768 3-55 (56) 9 3n3f_A Collagen alpha-1(XV) ch 99.5 3.9E-15 1.1E-19 121.9 5.4 52 717-768 2-53 (54) 10 3sh4_A LG3 peptide; actin disa 98.9 1.6E-08 4.5E-13 104.8 16.1 150 63-224 6-168 (195) 11 3v64_A Low-density lipoprotein 98.9 2.8E-08 8E-13 102.5 16.9 151 63-224 3-171 (191) 12 3pve_A Agrin, AGRN protein; mR 98.8 1E-07 2.9E-12 98.3 17.0 150 64-224 11-170 (189) 13 1pz7_A Agrin; structural prote 98.8 7.9E-08 2.2E-12 100.5 16.2 125 87-222 49-182 (204) 14 4pbp_A C-reactive protein; acu 98.8 7.1E-08 2E-12 100.7 15.5 158 54-228 2-172 (210) 15 3flp_A SAP-like pentraxin; phy 98.7 2.2E-07 6.3E-12 97.3 16.6 158 62-228 6-175 (217) 16 2h0b_A Neurexin-1-alpha; B-san 98.7 2.5E-07 7E-12 95.0 16.0 127 87-225 29-163 (184) 17 4avs_A Serum amyloid P-compone 98.7 4.2E-07 1.2E-11 94.5 16.3 127 87-228 32-166 (204) 18 2r16_A Neurexin-1-alpha; beta- 98.7 4.5E-07 1.3E-11 93.1 15.8 125 87-224 28-157 (182) 19 3bod_A Neurexin-1-alpha; neure 98.6 5.6E-07 1.6E-11 92.3 15.5 126 87-224 30-156 (178) 20 3pvn_A C-reactive protein; pen 98.6 6.3E-07 1.8E-11 93.2 16.0 127 87-228 32-168 (206) 21 4c1w_A Neuraminidase; sugar bi 98.5 1.8E-06 5E-11 88.9 14.4 137 86-228 33-181 (188) 22 2v73_A CBM40, putative EXO-alp 98.5 4.7E-06 1.3E-10 86.8 17.3 135 86-228 40-180 (191) 23 3asi_A Neurexin-1-alpha; beta- 98.4 3E-06 8.6E-11 98.1 15.6 127 87-225 250-377 (410) 24 1d2s_A SHBG, sex hormone-bindi 98.4 6.5E-06 1.8E-10 83.8 15.2 123 87-225 27-157 (170) 25 2jd4_A Laminin subunit alpha-1 98.3 1.2E-05 3.3E-10 92.2 16.0 125 87-224 221-356 (383) 26 1f5f_A SHBG, sex hormone-bindi 98.3 1.7E-05 4.7E-10 83.3 15.8 128 87-225 39-175 (205) 27 2r1d_A Neurexin-1-beta, neurex 98.3 1.2E-05 3.5E-10 85.9 14.9 126 87-224 64-190 (226) 28 1dyk_A Laminin alpha 2 chain; 98.1 2.5E-05 7E-10 89.9 15.4 126 87-225 233-369 (394) 29 4qvs_A S-layer domain-containi 98.1 5.3E-06 1.5E-10 87.1 8.5 164 53-228 38-213 (227) 30 2r1b_A Neurexin-1-beta, neurex 98.1 5.6E-05 1.6E-09 80.3 15.5 127 87-224 36-192 (220) 31 1h30_A GAS6, growth-arrest-spe 97.8 0.00034 9.6E-09 81.3 16.9 127 87-223 62-196 (422) 32 2jd4_A Laminin subunit alpha-1 97.8 0.0004 1.1E-08 79.5 17.1 125 87-223 44-176 (383) 33 1a8d_A Tetanus neurotoxin; clo 97.7 0.00092 2.6E-08 78.4 18.7 165 51-228 47-235 (452) 34 4dqa_A Uncharacterized protein 97.7 0.00024 6.7E-09 81.0 12.9 150 62-228 140-295 (355) 35 1dyk_A Laminin alpha 2 chain; 97.6 0.00072 2E-08 77.7 16.0 126 87-225 58-191 (394) 36 2vu9_A Botulinum neurotoxin A 97.6 0.0017 4.7E-08 74.2 17.3 169 50-231 48-231 (444) 37 2jkb_A Sialidase B; intramolec 97.6 0.00068 1.9E-08 84.0 15.2 164 62-233 34-211 (686) 38 2wjs_A Laminin subunit alpha-2 97.5 0.00062 1.7E-08 83.0 14.4 123 87-222 408-539 (608) 39 3asi_A Neurexin-1-alpha; beta- 97.5 0.001 2.9E-08 76.9 14.9 123 87-224 27-162 (410) 40 3vuo_A NTNHA; protection of bo 97.4 0.0021 5.9E-08 80.8 17.0 155 51-228 864-1025(1196) 41 1h30_A GAS6, growth-arrest-spe 97.4 0.00078 2.2E-08 78.2 12.4 127 87-221 250-392 (422) 42 3v0a_B NTNH; botulinum neuroto 97.3 0.003 8.6E-08 79.2 16.5 155 51-228 867-1028(1196) 43 3n7l_A Neurotoxin; HCR/D-SA, g 97.2 0.002 5.7E-08 74.8 13.0 163 51-230 32-219 (424) 44 3pme_A Type C neurotoxin; stru 97.2 0.0043 1.2E-07 70.7 15.1 167 51-231 31-210 (420) 45 3rsj_A BONT/F; clostridium bot 97.2 0.023 6.6E-07 64.3 19.7 165 50-231 29-212 (413) 46 2wjs_A Laminin subunit alpha-2 97.1 0.0055 1.6E-07 74.7 16.2 126 87-222 226-363 (608) 47 3qcw_A Neurexin-1-alpha; synap 97.0 0.006 1.7E-07 80.6 15.6 122 89-222 1084-1206(1245) 48 2nyy_A Botulinum neurotoxin ty 96.9 0.02 5.8E-07 71.9 18.1 167 50-230 900-1082(1295) 49 1epw_A Bontoxilysin B, botulin 96.9 0.023 6.5E-07 72.3 18.5 153 61-228 894-1067(1290) 50 2vxr_A Botulinum neurotoxin ty 96.6 0.038 1.1E-06 63.1 15.8 165 50-231 76-262 (482) 51 3qcw_A Neurexin-1-alpha; synap 96.5 0.018 5.1E-07 76.1 14.9 121 87-222 859-992 (1245) 52 2sli_A Intramolecular trans-si 96.4 0.037 1E-06 68.6 15.9 136 85-228 34-184 (679) 53 3ffz_A Botulinum neurotoxin ty 95.4 0.43 1.2E-05 60.3 18.2 163 51-230 876-1058(1252) 54 4b1m_A Levanase; hydrolase, CB 94.8 0.15 4.1E-06 52.5 10.2 89 87-182 65-157 (185) 55 4ccd_A Galactocerebrosidase; h 90.5 1.3 3.6E-05 54.8 11.6 88 87-181 528-621 (654) 56 1ms9_A Trans-sialidase; trans- 89.2 5.8 0.00016 48.8 15.9 126 87-227 495-627 (648) 57 1ei8_A Collagen-like peptide ( 89.2 0.61 1.7E-05 33.6 4.4 12 324-335 15-26 (29) 58 1pwb_A SP-D, PSP-D, pulmonary 80.4 0.41 1.1E-05 47.9 0.0 12 967-978 164-175 (177) 59 1pwb_A SP-D, PSP-D, pulmonary 77.1 0.59 1.7E-05 46.7 0.0 7 923-929 112-118 (177) 60 2zzj_A Glucuronan lyase A; bet 72.8 67 0.0019 34.4 14.6 179 50-237 21-235 (238) 61 3zyp_A CIP1; metal binding pro 72.7 27 0.00076 37.1 11.2 117 59-183 36-164 (218) 62 3w9a_A CCGH131A, putative unch 70.9 18 0.00052 38.9 9.5 76 87-175 93-175 (245) 63 4le3_A Beta-glucanase; GH131, 66.6 33 0.00092 37.2 10.4 77 87-175 94-181 (252) 64 3i8t_A Galectin-4; S-type lect 59.4 1.6E+02 0.0045 29.7 13.4 121 60-181 10-135 (164) 65 2dpr_A Conantokin-T, CON-T; co 56.7 5.7 0.00016 25.5 1.4 12 1010-1021 2-13 (21) 66 3imm_A Putative secreted glyco 54.0 18 0.00051 37.6 5.6 103 79-182 39-146 (201) 67 3s5q_A Putative glycosylhydrol 48.3 24 0.00067 37.2 5.5 102 79-182 52-159 (214) 68 3wvj_A Beta-glucanase; thermos 44.8 3.2E+02 0.0091 28.3 14.8 28 155-182 143-170 (220) 69 1buu_A Protein (mannose-bindin 44.0 5.8 0.00016 39.6 0.0 12 967-978 153-164 (168) 70 3u1x_A Putative glycosyl hydro 40.6 77 0.0022 33.7 8.1 97 87-183 80-187 (236) 71 3h3l_A Putative sugar hydrolas 37.3 29 0.00081 37.3 4.1 103 80-183 70-180 (241) 72 3i4i_A 1,3-1,4-beta-glucanase; 36.0 4.6E+02 0.013 27.6 15.2 29 154-182 160-188 (234) 73 3hbk_A Putative glycosyl hydro 35.2 92 0.0026 33.3 7.7 103 79-183 77-191 (245) 74 1axk_A Gluxyn-1; bifunctional, 34.7 5.2E+02 0.015 29.8 14.2 68 155-226 83-158 (394) 75 3osd_A Putative glycosyl hydro 34.6 48 0.0013 36.1 5.3 28 155-182 178-205 (265) 76 4jqt_A Putative glycosyl hydro 31.7 1.2E+02 0.0033 35.3 8.3 101 79-181 44-153 (431) 77 1o91_A Collagen alpha 1(VIII) 31.6 12 0.00034 38.3 0.0 55 881-941 70-125 (178) 78 3wv6_A Galectin-9; beta sandwi 30.6 4.8E+02 0.013 28.7 12.6 104 72-181 163-269 (296) 79 4bpz_A Endo-1,3-beta-glucanase 30.3 5.9E+02 0.017 27.1 13.1 32 151-182 179-210 (256) 80 3iln_A Laminarinase; jelly ROW 28.5 5E+02 0.014 27.4 12.1 34 149-182 158-191 (251) 81 2ayh_A 1,3-1,4-beta-D-glucan 4 28.0 4E+02 0.011 27.4 11.0 28 155-182 141-168 (214) 82 4jqt_A Putative glycosyl hydro 26.5 1E+02 0.0028 35.9 6.5 103 80-183 271-382 (431) 83 1cpn_A Circularly permuted; hy 25.8 6.3E+02 0.018 26.0 15.6 70 155-228 83-160 (208) 84 4qhz_A Putative glycosyl hydro 25.5 62 0.0017 34.9 4.2 91 78-181 86-200 (246) 85 1ajo_A CPA16M-127, circularly 25.4 1.6E+02 0.0046 30.8 7.3 76 155-234 15-98 (214) 86 1dyp_A Kappa-carrageenase; hyd 25.2 1.7E+02 0.0047 31.5 7.6 29 155-183 189-217 (271) 87 2uwa_A Cellulase; glycoside hy 24.3 7.9E+02 0.022 26.6 16.9 75 155-233 141-230 (274) 88 3h0o_A Beta-glucanase; 1,3-1,4 24.2 7.3E+02 0.021 26.2 12.4 29 154-182 91-119 (240) 89 3o5s_A Beta-glucanase; glycosy 23.8 4.3E+02 0.012 27.8 10.4 28 155-182 165-192 (238) 90 1buu_A Protein (mannose-bindin 23.0 21 0.0006 35.4 0.0 8 834-841 70-77 (168) 91 1umz_A Xyloglucan endotransgly 22.6 8.6E+02 0.024 26.4 16.9 28 155-182 130-157 (278)No 1>1dy2_A Collagen alpha1(XV) chain; angiogenesis inhibitor; 2.0A {Mus musculus} SCOP: d.169.1.5 Probab=100.00 E-value=2.3e-62 Score=488.89 Aligned_cols=169 Identities=52% Similarity=0.985 Sum_probs=162.9 Q ss_pred ceeEEEEcCCCCCCCCCccchhhHHHHHHHhhcCCCCceeEEeeccccCcccccCCCCC-CCccccCCCcEEecCccccc Q FBpp0308936 814 RMLRVAALNEPSTGDLQGIRGADFACYRQGRRAGLLGTFKAFLSSRVQNLDTIVRPADR-DLPVVNTRGDVLFNSWKGIF 892 (1022) Q Consensus 814 ~~l~l~a~~~~~~G~~~Gi~GAD~~C~~~a~~~g~~gt~rA~Ls~~~~~~~~~v~~~dr-~~p~vn~~g~vl~~~~~~l~ 892 (1022) ++|||||||+|++|||+ ||++||+|||++|++||||||||+++||+++|||++|| ++||||+||+|||+||++|| T Consensus 8 ~~L~lvALN~P~sG~m~----AD~~C~~qAraaGl~gTfRAfLSs~~qdl~~iV~~~DR~~~PivNlkGevLf~sw~~lf 83 (180) T 1dy2_A 8 PVLHLVALNTPVAGDIR----ADFQCFQQARAAGLLSTFRAFLSSHLQDLSTVVRKAERFGLPIVNLKGQVLFNNWDSIF 83 (180) T ss_dssp CCEEEEECSSCBCSBCC----HHHHHHHHHHHTTCCSCEEESSCBTTBCGGGSSCGGGSSSCCEECTTSCEEESCSGGGG T ss_pred ccEEEEEcCCCCCCCch----HHHHHHHHHHHhCCCCceEEEeecccccCccccCHhHcCCCCeEcCCCCEEecCHHHHh Confidence 37999999999999999 99999999999999999999999999999999999999 79999999999999999999 Q ss_pred cCCCCcccCCCceeecCCCccCCCCCCCcceEEecCCCCcccccCcccCcccCCCCCceeecccCCcccccccccccccC Q FBpp0308936 893 NGQGGFFSQAPRIYSFSGKNVMTDSTWPMKMVWHGSLPNGERSMDTYCDAWHSGDHLKGSFASNLDGHKLLEQKRQSCDS 972 (1022) Q Consensus 893 ~~~~~~~~~~~~i~~f~~~~~~~~~~~~~k~vw~Gs~~~g~~~~~~~C~~W~s~~~~~~g~as~~~~~~~~~~~~~~C~~ 972 (1022) ++++++|+.+.+||+||+||||+|++||||.|||||++||++.+++||++|||++.+++|+||+|.+++||.|+.+||++ T Consensus 84 ~g~~~~l~~~~~Iysfdg~dVl~d~~wP~K~vWhGS~~~G~r~~d~~C~~W~s~~~~~~G~Assl~~g~ll~q~~~sC~~ 163 (180) T 1dy2_A 84 SGDGGQFNTHIPIYSFDGRDVMTDPSWPQKVVWHGSNPHGVRLVDKYCEAWRTTDMAVTGFASPLSTGKILDQKAYSCAN 163 (180) T ss_dssp SSSCCBCCTTSCCBBTTSCBTTTCTTCSSCEEECCBCTTSCBCTTSBHHHHBCCCTTCEEEEEEGGGTBSSCCEEEETTS T ss_pred CCCCCccCCCCCeeccCCcccccCCCccccccccCCCCCCCCcccccccCCccCCCCceEeeeecCCCCcccCcccCCCC Confidence 99988999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred CcEEEEEecccHHH Q FBpp0308936 973 KLIILCVEALSQDR 986 (1022) Q Consensus 973 ~~~~lCve~~~~~~ 986 (1022) +||||||||+.... T Consensus 164 ~~ivLCIEn~~~~~ 177 (180) T 1dy2_A 164 RLIVLCIENSFMTD 177 (180) T ss_dssp CBBCEEEECCC--- T ss_pred ceEEEEEEcccccc Confidence 99999999986543No 2>1koe_A Endostatin; angiogenesis inhibitor, collagen XVIII, non-collageneous domain, heparin-binding domain; 1.50A {Mus musculus} SCOP: d.169.1.5 PDB: 1dy0_A 1dy1_A 1bnl_A Probab=100.00 E-value=6.8e-62 Score=490.76 Aligned_cols=168 Identities=48% Similarity=0.920 Sum_probs=165.2 Q ss_pred eeEEEEcCCCCCCCCCccchhhHHHHHHHhhcCCCCceeEEeeccccCcccccCCCCC-CCccccCCCcEEecCcccccc Q FBpp0308936 815 MLRVAALNEPSTGDLQGIRGADFACYRQGRRAGLLGTFKAFLSSRVQNLDTIVRPADR-DLPVVNTRGDVLFNSWKGIFN 893 (1022) Q Consensus 815 ~l~l~a~~~~~~G~~~Gi~GAD~~C~~~a~~~g~~gt~rA~Ls~~~~~~~~~v~~~dr-~~p~vn~~g~vl~~~~~~l~~ 893 (1022) +|||||||+||+|||+||+|||++||+||+++|++||||||||+++|++++||+++|| ++||||+||||||+||+|||+ T Consensus 3 ~l~lvaln~p~~GnlgGi~GAD~~C~~~A~aaGl~gtfRAfLSs~~q~~~~iV~~~dr~~~P~vN~kg~vl~~~~~~l~~ 82 (172) T 1koe_A 3 VLHLVALNTPLSGGMRGIRGADFQCFQQARAVGLSGTFRAFLSSRLQDLYSIVRRADRGSVPIVNLKDEVLSPSWDSLFS 82 (172) T ss_dssp CEEEEECSSCBCSCSSHHHHHHHHHHHHHHHTTCCSCEEESCCBTTBCGGGGSCGGGTTTCCEECTTCCEEESCHHHHTS T ss_pred ceEEEEeCCCcCCCcccchhHHHHHHHHHHhcCCCCeeEEEEEcccCCccceeccccccCCCeECCcCcEEeCCHHHhcC Confidence 7999999999999999999999999999999999999999999999999999999999 799999999999999999999 Q ss_pred CCCCcccCCCceeecCCCccCCCCCCCcceEEecCCCCcccccCcccCcccCCCCCceeecccCCcccccccccccccCC Q FBpp0308936 894 GQGGFFSQAPRIYSFSGKNVMTDSTWPMKMVWHGSLPNGERSMDTYCDAWHSGDHLKGSFASNLDGHKLLEQKRQSCDSK 973 (1022) Q Consensus 894 ~~~~~~~~~~~i~~f~~~~~~~~~~~~~k~vw~Gs~~~g~~~~~~~C~~W~s~~~~~~g~as~~~~~~~~~~~~~~C~~~ 973 (1022) +++++|++++.||+||+||||+|++||+|+|||||++||+|.+++||++|||++.+++|+||+|++++||+|+.++|+++ T Consensus 83 ~~~~~~~~~~~i~sfn~~dvl~d~~wp~k~vWtGs~~~G~~~~~~~C~~Wts~~~~~~G~assl~~~~ll~q~~~sCs~~ 162 (172) T 1koe_A 83 GSQGQLQPGARIFSFDGRDVLRHPAWPQKSVWHGSDPSGRRLMESYCETWRTETTGATGQASSLLSGRLLEQKAASCHNS 162 (172) T ss_dssp SSCSBCCTTCCCBBTTSCBTTTCTTSSSCEEECCBCTTSCBCTTSBHHHHTCCCTTCEEEEEEGGGTBSCCCEEEETTSC T ss_pred CCCccccCCCceEccCCCccccCCCCccceeEECCCCCCcCcCCCcccCCcCCCCCceEeeccCCCCCcccCcCCCcCCC Confidence 99999999999999999999999999999999999999999889999999999999999999999999999999999999 Q ss_pred cEEEEEecc Q FBpp0308936 974 LIILCVEAL 982 (1022) Q Consensus 974 ~~~lCve~~ 982 (1022) |+||||||+ T Consensus 163 ~~vLCIE~~ 171 (172) T 1koe_A 163 YIVLCIENS 171 (172) T ss_dssp BBCEEEECC T ss_pred cEEEEEeec Confidence 999999996No 3>2uur_A Collagen alpha-1(IX) chain; glycoprotein, hydroxylation, structural protein, NC4, collagen IX, polymorphism, extracellular matrix; 1.8A {Homo sapiens} Probab=100.00 E-value=2.4e-33 Score=303.78 Aligned_cols=195 Identities=18% Similarity=0.273 Sum_probs=167.0 Q ss_pred ccccccccchhccCC---CCCceEEccCCCC-CcceEecCCCccCCchhhccCCCCc-ceEEEEEEeecCCCC---ceEE Q FBpp0308936 34 DALAEYTLTDIMNNN---QFAGIEFGEAEDG-FPAFRFLQTADVKSPYRMLLPEKLY-EFAILITFRQSSLKG---GYLF 105 (1022) Q Consensus 34 d~l~~~dL~~l~g~~---~~~GV~~v~G~d~-~pAy~f~~~a~l~~pt~~~fP~~~~-eFSilaT~R~~~~~~---g~Lf 105 (1022) |.++.|||+++++.+ .+.||++++|++. ++||+|.+.+++..|++++||++|+ ||||++|||+.+.+. |+|| T Consensus 29 ~~~~~~Dll~~l~l~~~~~~~gv~~v~G~~~~~~ay~~~~~a~l~~pt~~~fP~~lp~eFsi~~tlr~~~~~~~~~~~Lf 108 (245) T 2uur_A 29 DDLPGFDLISQFQVDKAASRRAIQRVVGSATLQVAYKLGNNVDFRIPTRNLYPSGLPEEYSFLTTFRMTGSTLKKNWNIW 108 (245) T ss_dssp -CCCEEEHHHHTTHHHHHTTTSSCEEECSSTTCEEEEECSSCCCEEEHHHHCTTCCCSSEEEEEEEECCGGGGGCEEEEE T ss_pred CCCCCcceeHhhCCCCcCCCCCeeEccCCCCCccEEEECCCcccCcchHHhccccCCCCEEEEEEEEccCCCCCCceEEE Confidence 456778888877766 4899999999764 8999999999999999999999999 999999999865444 5999 Q ss_pred EEEcCCCCeEEEEEEEcccccCceeEEEEEeeccCCcceeEeeeec--ccCCCCeeEEEEEEeCCeEEEEEcCccceeee Q FBpp0308936 106 SVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLASFGV--AHVPDKWNSIALQVLSDKVSFYYDCELRNTTL 183 (1022) Q Consensus 106 sV~~~~~~~~qlgl~l~~~~~~~~~i~L~Y~~~~~~~~~~~~sF~v--~ladg~WHrlaLsV~g~~VtLyVDC~~~~t~~ 183 (1022) +|++. ++.+||+|+|++. +++|.|+|++.++.. +.++|.+ +++|++||||+|+|++++|+|||||+++.++. T Consensus 109 si~~~-~~~~qlgl~l~~~---~~~v~~~y~~~~G~~--~~~~F~~~~~l~dg~WH~lalsV~~~~VtLyvDC~~~~~~~ 182 (245) T 2uur_A 109 QIQDS-SGKEQVGIKINGQ---TQSVVFSYKGLDGSL--QTAAFSNLSSLFDSQWHKIMIGVERSSATLFVDCNRIESLP 182 (245) T ss_dssp EEECT-TSCEEEEEEEEGG---GTEEEEEEEBTTSCE--EEEEECCCGGGCSSSCEEEEEEEETTEEEEEETTEEEEEEE T ss_pred EEEcC-CCCEEEEEEEcCC---CCEEEEEEECCCCCE--EEEEECCCCccCCCCEEEEEEEEECCEEEEEEeCCcCcccc Confidence 99997 6799999999986 558999999876544 6789965 99999999999999999999999999999998 Q ss_pred ccCCCcceeccCCeeEEEEecccccCC-ccccceeeeEEeeCcccc-cccCCCCCCC Q FBpp0308936 184 VTREPIELVFDSASTLYIGQAGSIIGG-KFEGYLEKINVYGNPDAI-NVTCMPPPKA 238 (1022) Q Consensus 184 l~r~~~~l~~~~~~~l~iGq~g~~~~~-~F~G~LQ~L~i~~dp~~a-~~~C~~~~~~ 238 (1022) +.+. . .++.++.++||++.. .++ .|+|+||+|+|++||+++ +++|++++.. T Consensus 183 l~~~-~--~l~~~g~~~lG~~~~-~~~~~f~G~lQ~l~i~~~p~~a~~~~C~e~~~~ 235 (245) T 2uur_A 183 IKPR-G--PIDIDGFAVLGKLAD-NPQVSVPFELQWMLIHCDPLRPRRETCHELPAR 235 (245) T ss_dssp CCCB-C--CCCCSSEEEEEEESS-CTTCBCCEEEEEEEEESCTTGGGGCCCTTCC-- T ss_pred ccCC-C--ccCcCCEEEEEeccC-CCCCeEEEEEEEEEEEcCCCchhhCccccCCCC Confidence 8763 2 345578999999954 344 899999999999999998 9999998754No 4>2erf_A Thrombospondin-1; TSP-1, N-terminal TSPN, HBD, sugar binding protein; 1.45A {Homo sapiens} SCOP: b.29.1.4 PDB: 2es3_A 1z78_A Probab=99.97 E-value=1.1e-31 Score=284.24 Aligned_cols=194 Identities=16% Similarity=0.187 Sum_probs=161.7 Q ss_pred ccccccccchhccCCC-CCceEEccCCCC-CcceEecCCCccCCchhhccCCC-----Cc-ceEEEEEEeecCCCCceEE Q FBpp0308936 34 DALAEYTLTDIMNNNQ-FAGIEFGEAEDG-FPAFRFLQTADVKSPYRMLLPEK-----LY-EFAILITFRQSSLKGGYLF 105 (1022) Q Consensus 34 d~l~~~dL~~l~g~~~-~~GV~~v~G~d~-~pAy~f~~~a~l~~pt~~~fP~~-----~~-eFSilaT~R~~~~~~g~Lf 105 (1022) |++..|||+++++.+. +.||++++|.+. ++||+|.+.+++..+++++||+. |+ ||||++|||+.+++.++|| T Consensus 2 ~d~~~~Dll~~~~l~~~~~gv~~~~G~~~~~~ay~~~~~a~l~~~t~~~~P~~~~~l~~~~~Fsi~~tlr~~~~~~~~L~ 81 (209) T 2erf_A 2 GDNSVFDIFELTGAARKGSGRRLVKGPDPSSPAFRIEDANLIPPVPDDKFQDLVDAVRTEKGFLLLASLRQMKKTRGTLL 81 (209) T ss_dssp CTTCEEEHHHHHTTTTSCSSEEEECCSSTTSCEEEESCGGGSCCCCHHHHHHHHHHHHHHTEEEEEEEEEECTTCEEEEE T ss_pred CCcceeeehhhhCCCCccCceEEeeCCCCCccEEEEecccccccCchHhccchhhhhcCCCcEEEEEEEEeCCCCCeEEE Confidence 5678899999999886 899999999876 99999999999999999999998 88 9999999999999999999 Q ss_pred EEEcCCCCeEEEEEEEcccccCceeEEEEEeeccCCcceeEeee-ecccCCCCeeEEEEEEeCCeEEEEEcCccceeeec Q FBpp0308936 106 SVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLASF-GVAHVPDKWNSIALQVLSDKVSFYYDCELRNTTLV 184 (1022) Q Consensus 106 sV~~~~~~~~qlgl~l~~~~~~~~~i~L~Y~~~~~~~~~~~~sF-~v~ladg~WHrlaLsV~g~~VtLyVDC~~~~t~~l 184 (1022) +|++..+..+||+|+|++. .++|.|+|+..+ .++.++| .++++|++||||+|+|++++|+|||||+++.++.+ T Consensus 82 si~~~~~~~~~lgl~l~~~---~~~l~~~y~~~g---~~~~~~f~~~~l~dg~WH~lal~V~~~~V~LyvDC~~~~~~~l 155 (209) T 2erf_A 82 ALERKDHSGQVFSVVSNGK---AGTLDLSLTVQG---KQHVVSVEEALLATGQWKSITLFVQEDRAQLYIDCEKMENAEL 155 (209) T ss_dssp EEEETTSSCEEEEEEEETT---TTEEEEEEEETT---EEEEEEESSCCCCSSSEEEEEEEEETTEEEEEETTTEEEEEEC T ss_pred EEECCCCCEEEEEEEEeCC---CcEEEEEEecCC---CEEEEEEcCccccCCcEEEEEEEEECCEEEEEECCcccceeEc Confidence 9999855457899999986 458999999743 3466778 59999999999999999999999999999999999 Q ss_pred cCCCcceeccCCeeEEEEecccc--cCCccccceeeeEEeeCcccc---cccCCC Q FBpp0308936 185 TREPIELVFDSASTLYIGQAGSI--IGGKFEGYLEKINVYGNPDAI---NVTCMP 234 (1022) Q Consensus 185 ~r~~~~l~~~~~~~l~iGq~g~~--~~~~F~G~LQ~L~i~~dp~~a---~~~C~~ 234 (1022) ++.... .++.+..+++|++... ..++|+|+||+|+|+++|+++ +..||+ T Consensus 156 ~~~~~~-~~~~g~~~~~G~~~~~~g~~~~F~G~iq~l~i~~~~~~~~~~~~~~c~ 209 (209) T 2erf_A 156 DVPIQS-VFTRDLASIARLRIAKGGVNDNFQGVLQNVRFVFGTTPEDILRNKGCS 209 (209) T ss_dssp SSCGGG-TCCTTHHHHEEEEESCCTTTCBCCEEEEEEEEECSCCHHHHHHTTCCC T ss_pred CCcccc-ccCCCCeeeEEEEecCCCCcccceEEeeEEEEEeCCCHHHhhhhccCC Confidence 875222 2333434455655221 124899999999999999875 566663No 5>3hqv_A Collagen alpha-1(I) chain; native, in SITU, molecular envelope, triple-helical, supermolecular, supramolecular, packing structure; 5.16A {Rattus norvegicus} SCOP: i.25.1.1 PDB: 3hr2_A Probab=99.97 E-value=3.5e-29 Score=315.12 Aligned_cols=32 Identities=44% Similarity=0.767 Sum_probs=14.2 Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC Q FBpp0308936 653 SGPKGEPGVDSRSSFFGDASYYGRPEPPRQPG 684 (1022) Q Consensus 653 ~G~~G~~G~~g~~~~~g~~~~~G~pgppg~~g 684 (1022) +|+.|++|..+..+..|..+.+|.+++++.++ T Consensus 997 ~G~~G~~G~~G~~G~~G~~G~~G~pGppGpPG 1028 (1056) T 3hqv_A 997 PGPIGPPGPRGRTGDSGPAGPPGPPGPPGPPG 1028 (1056) T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC Confidence 34444444444444444444444444444444No 6>3hqv_B Collagen alpha-2(I) chain; native, in SITU, molecular envelope, triple-helical, supermolecular, supramolecular, packing structure; 5.16A {Rattus norvegicus} SCOP: i.25.1.1 PDB: 3hr2_B Probab=99.97 E-value=7.4e-29 Score=311.45 Aligned_cols=9 Identities=56% Similarity=1.261 Sum_probs=3.3 Q ss_pred CCCCCCCCC Q FBpp0308936 675 GRPEPPRQP 683 (1022) Q Consensus 675 G~pgppg~~ 683 (1022) |.+++++.+ T Consensus 1014 G~pGppGpP 1022 (1028) T 3hqv_B 1014 GPPGPPGPP 1022 (1028) T ss_pred CCCCCCCCC Confidence 333333333No 7>1za4_A Thrombospondin 1; TSP-1, NTSP-1, HBD, arixtra, cell adhesion; HET: SGN; 1.90A {Homo sapiens} SCOP: b.29.1.4 PDB: 2ouh_A 2ouj_A Probab=99.97 E-value=1.6e-30 Score=282.50 Aligned_cols=195 Identities=18% Similarity=0.270 Sum_probs=156.6 Q ss_pred ccccccccchhccCCC-CCceEEccCCCC-CcceEecCCCccCCchhhccCCC---C--c-ceEEEEEEeecCCCCceEE Q FBpp0308936 34 DALAEYTLTDIMNNNQ-FAGIEFGEAEDG-FPAFRFLQTADVKSPYRMLLPEK---L--Y-EFAILITFRQSSLKGGYLF 105 (1022) Q Consensus 34 d~l~~~dL~~l~g~~~-~~GV~~v~G~d~-~pAy~f~~~a~l~~pt~~~fP~~---~--~-eFSilaT~R~~~~~~g~Lf 105 (1022) ++...|||+++++.+. +.||++++|.+. .+||+|.+.+.+..+++++||+. | + ||||++|||+.+++.++|| T Consensus 12 ~d~~~~DLl~~lgl~~~~~GV~~~~G~~~~~~Ay~~~~~~~~~~~t~~~~P~g~~~~~~p~eFsi~~tlr~~~~~~~~Lf 91 (251) T 1za4_A 12 GDNSVFDIFELTGAARKGSGRRLVKGPDPSSPAFRIEDANLIPPVPDDKFQDLVDAVRTEKGFLLLASLRQMKKTRGTLL 91 (251) T ss_dssp ---CEEEHHHHHCCCCTTSSEEEECCSSTTSCEEEESCGGGSCCCCHHHHHHHHHHHHHHTEEEEEEEEEECTTCEEEEE T ss_pred CcccCcceehhhCCCCccCCeEEccCCCCCccEEEEcCcccccCChhHhCcchhhccCCCCcEEEEEEEEecCCCCcEEE Confidence 5688899999999886 689999999886 99999999889999999999994 8 8 9999999999999999999 Q ss_pred EEEcCCCCeEEEEEEEcccccCceeEEEEEeeccCCcceeEeee-ecccCCCCeeEEEEEEeCCeEEEEEcCccceeeec Q FBpp0308936 106 SVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLASF-GVAHVPDKWNSIALQVLSDKVSFYYDCELRNTTLV 184 (1022) Q Consensus 106 sV~~~~~~~~qlgl~l~~~~~~~~~i~L~Y~~~~~~~~~~~~sF-~v~ladg~WHrlaLsV~g~~VtLyVDC~~~~t~~l 184 (1022) +|++..+..++|+|+|++. .++|.|+|++. + .+++++| .++++|++||||+|+|++++|+|||||+++.++.+ T Consensus 92 si~d~~~~~q~lgv~l~g~---~~~l~~~y~~~-G--~~~~~~f~~~~L~dg~WH~lalsV~~~~VtLyvDC~~~~~~~l 165 (251) T 1za4_A 92 ALERKDHSGQVFSVVSNGK---AGTLDLSLTVQ-G--KQHVVSVEEALLATGQWKSITLFVQEDRAQLYIDCEKMENAEL 165 (251) T ss_dssp EEEETTSSCEEEEEEEETT---TTEEEEEEEET-T--EEEEEEESSCCCCSSSCEEEEEEEETTEEEEEETTSCCEEEEC T ss_pred EEEcCCCCEEEEEEEEeCC---CcEEEEEEecC-C--CEEEEEEeccccCCCcEEEEEEEEECCEEEEEECCcccccccc Confidence 9999855555689999987 45899999984 3 3467788 59999999999999999999999999999999988 Q ss_pred cCCCcceeccCC----eeEEEEecccccCCccccceeeeEE--eeCcccc-cccCCCCCC Q FBpp0308936 185 TREPIELVFDSA----STLYIGQAGSIIGGKFEGYLEKINV--YGNPDAI-NVTCMPPPK 237 (1022) Q Consensus 185 ~r~~~~l~~~~~----~~l~iGq~g~~~~~~F~G~LQ~L~i--~~dp~~a-~~~C~~~~~ 237 (1022) ++....+ +..+ +.+++++.+ ..++|+|+||+|+| +|+++++ ++.||+++. T Consensus 166 ~~~~~~~-~~~G~~~~g~~~~~~g~--~~~~f~G~lq~L~Iv~~~d~~~a~~~~~Ce~~~ 222 (251) T 1za4_A 166 DVPIQSV-FTRDLASIARLRIAKGG--VNDNFQGVLQNVRFVFGTTPEDILRNKGCSSST 222 (251) T ss_dssp SSCGGGT-SCTTGGGTEEEEESCCS--TTCBCCEEEEEEEEECSCCHHHHHHHTTCC--- T ss_pred cCCcccc-cCCCcEEEEEEEecCCC--CccceEEEEEEEEEEccCChhhhccccCCCCCC Confidence 8743233 2333 334443321 23589999999999 7888776 566666654No 8>3hsh_A Endostatin, collagen alpha-1(XVIII) chain; extracellular matrix, basement membrane, collagen trimerization domain, folding, association; 1.80A {Homo sapiens} PDB: 3hon_A Probab=99.55 E-value=2.5e-15 Score=123.90 Aligned_cols=53 Identities=26% Similarity=0.477 Sum_probs=51.0 Q ss_pred CceeEeccHHHHhhhcCCCCCCceeeecccceEEEEEcCCceEeccCcccccC Q FBpp0308936 716 PGAVTFQNIDEMTKKSALNPPGTLAYITEEEALLVRVNKGWQYIALGTLVPIA 768 (1022) Q Consensus 716 pgv~t~~n~~~m~~~s~~s~eGtlayi~~~~~l~vrv~~g~~~i~lg~~~p~~ 768 (1022) .|+++|+|+++|+++++..+||||+|++|+++|||||+||||+|+|+.++|++ T Consensus 3 ~gv~~~~t~~~ml~~~~~~~eGtL~yv~d~~eLyiRVr~Gwr~V~Lg~~~pip 55 (56) T 3hsh_A 3 SGVRLWATRQAMLGQVHEVPEGWLIFVAEQEELYVRVQNGFRKVQLEARTPLP 55 (56) T ss_dssp CCEEEESSHHHHHHHGGGSCTTCEEEETTTTEEEEEETTEEEEECEEEEEECC T ss_pred CcEEEEecHHHHHhhCccCCCeEEEEEEecceEEEEEcCcEEEEeecccccCC Confidence 36899999999999999999999999999999999999999999999999986No 9>3n3f_A Collagen alpha-1(XV) chain; extracellular matrix, basement membrane, collagen trimerization domain, folding, association, chain selection helix; 2.00A {Homo sapiens} Probab=99.55 E-value=3.9e-15 Score=121.95 Aligned_cols=52 Identities=35% Similarity=0.742 Sum_probs=49.8 Q ss_pred ceeEeccHHHHhhhcCCCCCCceeeecccceEEEEEcCCceEeccCcccccC Q FBpp0308936 717 GAVTFQNIDEMTKKSALNPPGTLAYITEEEALLVRVNKGWQYIALGTLVPIA 768 (1022) Q Consensus 717 gv~t~~n~~~m~~~s~~s~eGtlayi~~~~~l~vrv~~g~~~i~lg~~~p~~ 768 (1022) ++++|+|+++|+++++..+||||+|++|+++|||||++|||+|+||.++|++ T Consensus 2 ~v~~~~t~~~M~~~~~~~~eGtL~yv~d~~eLyiRVr~Gwr~V~Lg~~ip~p 53 (54) T 3n3f_A 2 LVTAFSNMDDMLQKAHLVIEGTFIYLRDSTEFFIRVRDGWKKLQLGELIPIP 53 (54) T ss_dssp CEEEESSHHHHHTTGGGSCTTEEEEETTTTEEEEEETTEEEECCCCCCCCCC T ss_pred CcEEEecHHHHHhhCccCCCeEEEEEEecceEEEEEcCceeeeeecccccCC Confidence 4789999999999999999999999999999999999999999999999874No 10>3sh4_A LG3 peptide; actin disassambly, integrin alpha12 BETA1, metal binding Pro; 1.50A {Homo sapiens} SCOP: b.29.1.0 PDB: 3sh5_A Probab=98.93 E-value=1.6e-08 Score=104.75 Aligned_cols=150 Identities=12% Similarity=0.101 Sum_probs=100.5 Q ss_pred cceEecCCCccCCchhhccCCC-Cc-ceEEEEEEeecCCCCceEEEEEcC----CCCeEEEEEEEcccccCceeEEEEEe Q FBpp0308936 63 PAFRFLQTADVKSPYRMLLPEK-LY-EFAILITFRQSSLKGGYLFSVVNP----LDTVVQLGVHLSPVVKNSYNVSLVYT 136 (1022) Q Consensus 63 pAy~f~~~a~l~~pt~~~fP~~-~~-eFSilaT~R~~~~~~g~LfsV~~~----~~~~~qlgl~l~~~~~~~~~i~L~Y~ 136 (1022) .+..|.....+..+... |+.. .. +|+|.++||... ..+.||.+.+. .....+|.|.|... .|.|.|. T Consensus 6 ~~~~F~g~sy~~~~~~~-~~~~~~~~~~~is~~frT~~-~~Glll~~~~~~~~~~~~~d~~~l~l~~G-----~l~~~~~ 78 (195) T 3sh4_A 6 YGAYFHDDGFLAFPGHV-FSRSLPEVPETIELEVRTST-ASGLLLWQGVEVGEAGQGKDFISLGLQDG-----HLVFRYQ 78 (195) T ss_dssp TEEEEEEEEEEEECGGG-GCCCSTTCCEEEEEEEEECC-SSEEEEEECCCTTCTTSTTCEEEEEEETT-----EEEEEEE T ss_pred cccEECCCceEEECccc-ccccccCCCcEEEEEEEeCC-CCeEEEEccCcccCCCCCCCeEEEEEECC-----EEEEEEE Confidence 45666655555555442 3332 24 899999999654 45788876531 23456888888764 4777776 Q ss_pred eccCCcceeEeeeecccCCCCeeEEEEEEeCCeEEEEEcCccceeeeccCCCcceeccCCeeEEEEecccc-------cC Q FBpp0308936 137 QADQNIGRKLASFGVAHVPDKWNSIALQVLSDKVSFYYDCELRNTTLVTREPIELVFDSASTLYIGQAGSI-------IG 209 (1022) Q Consensus 137 ~~~~~~~~~~~sF~v~ladg~WHrlaLsV~g~~VtLyVDC~~~~t~~l~r~~~~l~~~~~~~l~iGq~g~~-------~~ 209 (1022) ...+. ..+.....+.|++||+|+|...+..++|||||....+...+.....+ +....||||..... .. T Consensus 79 ~g~g~---~~i~s~~~l~Dg~WH~V~v~~~~~~~~L~VD~~~~~~~~~~~~~~~l--~~~~~l~iGG~~~~~~~~~~~~~ 153 (195) T 3sh4_A 79 LGSGE---ARLVSEDPINDGEWHRVTALREGRRGSIQVDGEELVSGRSPGPNVAV--NAKGSVYIGGAPDVATLTGGRFS 153 (195) T ss_dssp CSSCE---EEEEEEEECCSSSCEEEEEEEETTEEEEEETTCCCEEEECCSSCCCC--CCCSCEEESCCTTHHHHTTTSCC T ss_pred CCCCE---EEEEcCCeecCCCeEEEEEEEeCCEEEEEECCcceeeEECCCcccee--cCCCCEEECCCCCcccccccccc Confidence 54322 22334678899999999999999999999999987665444322222 33568999976321 13 Q ss_pred CccccceeeeEEeeC Q FBpp0308936 210 GKFEGYLEKINVYGN 224 (1022) Q Consensus 210 ~~F~G~LQ~L~i~~d 224 (1022) ..|+|-|++|+|.-. T Consensus 154 ~~F~GCi~~v~i~~~ 168 (195) T 3sh4_A 154 SGITGCVKNLVLHSA 168 (195) T ss_dssp CCCSEEEEEEEEEEC T ss_pred CCcEEEeeEEEECCc Confidence 469999999999653No 11>3v64_A Low-density lipoprotein receptor-related protein; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus} SCOP: b.29.1.4 PDB: 3v65_A Probab=98.91 E-value=2.8e-08 Score=102.51 Aligned_cols=151 Identities=14% Similarity=0.173 Sum_probs=99.7 Q ss_pred cceEecCCCccCCchhh-------ccCCC-Cc-ceEEEEEEeecCCCCceEEEEEcCCCCeEEEEEEEcccccCceeEEE Q FBpp0308936 63 PAFRFLQTADVKSPYRM-------LLPEK-LY-EFAILITFRQSSLKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSL 133 (1022) Q Consensus 63 pAy~f~~~a~l~~pt~~-------~fP~~-~~-eFSilaT~R~~~~~~g~LfsV~~~~~~~~qlgl~l~~~~~~~~~i~L 133 (1022) .|+.|.....+..+... .||.. .. +|+|.++||... ..+.||...+..+...+|.|+|... .|.| T Consensus 3 ~~~~F~G~syv~~~~~~~~~~~~~~~~~~~~~~~~~is~~frT~~-~~glll~~~~~~~~~~~~~l~l~~G-----~l~~ 76 (191) T 3v64_A 3 ETLAFDGRTYIEYLNAVIESELTNEIPAEKALQSNHFELSLRTEA-TQGLVLWIGKAAERADYMALAIVDG-----HLQL 76 (191) T ss_dssp CEEEEESSCCEEEECSCCCHHHHCCCCCCEEESEEEEEEEEECSC-SSEEEEEESCCSTTCCEEEEEEETT-----EEEE T ss_pred cceeECCceeEEecCccccccccccCcccccccceEEEEEEEeCC-CCeEEEEeCCCCCCCCEEEEEEECC-----EEEE Confidence 35666554444433321 23332 34 899999999765 4578877655323567888888654 4777 Q ss_pred EEeeccCCcceeEeeeecccCCCCeeEEEEEEeCCeEEEEEcCccceeeeccCCCcceeccCCeeEEEEecccc------ Q FBpp0308936 134 VYTQADQNIGRKLASFGVAHVPDKWNSIALQVLSDKVSFYYDCELRNTTLVTREPIELVFDSASTLYIGQAGSI------ 207 (1022) Q Consensus 134 ~Y~~~~~~~~~~~~sF~v~ladg~WHrlaLsV~g~~VtLyVDC~~~~t~~l~r~~~~l~~~~~~~l~iGq~g~~------ 207 (1022) .|...++. ..+.....+.|++||+|+|...+..++||||+....+...+.....+. ....||||..... T Consensus 77 ~~~~g~~~---~~~~~~~~v~Dg~WH~V~v~~~~~~~~L~vD~~~~~~~~~~~~~~~l~--~~~~l~iGg~~~~~~~~~~ 151 (191) T 3v64_A 77 SYDLGSQP---VVLRSTVKVNTNRWLRIRAHREHREGSLQVGNEAPVTGSSPLGATQLD--TDGALWLGGLQKLPVGQAL 151 (191) T ss_dssp EEESSSCC---EEEEEEEECTTSSCEEEEEEEETTEEEEEETTSCCEEEECCTTCCCEE--ECSEEEESCCSSCCSSCCS T ss_pred EEECCCCc---EEEEeCCEecCCCcEEEEEEEEccEEEEEECCcceEeeECCCCcccCc--CCCCEEECCCCcccccccc Confidence 77654322 233346778999999999999999999999998876654443222333 3568999976321 Q ss_pred ---cCCccccceeeeEEeeC Q FBpp0308936 208 ---IGGKFEGYLEKINVYGN 224 (1022) Q Consensus 208 ---~~~~F~G~LQ~L~i~~d 224 (1022) ....|+|-|++|+|... T Consensus 152 ~~~~~~~F~Gci~~v~i~~~ 171 (191) T 3v64_A 152 PKAYGTGFVGCLRDVVVGHR 171 (191) T ss_dssp CGGGTSBCEEEEEEEEETTE T ss_pred cccccCCCeEEeeEEEECCE Confidence 13469999999999643No 12>3pve_A Agrin, AGRN protein; mRNA splicing, structural genomics, PSI-2, protein structure initiative; 1.40A {Mus musculus} SCOP: b.29.1.0 Probab=98.81 E-value=1e-07 Score=98.35 Aligned_cols=150 Identities=13% Similarity=0.110 Sum_probs=97.5 Q ss_pred ceEecCCCccCCchhhccCCCCc-ceEEEEEEeecCCCCceEEEEEcC-CCCeEEEEEEEcccccCceeEEEEEeeccCC Q FBpp0308936 64 AFRFLQTADVKSPYRMLLPEKLY-EFAILITFRQSSLKGGYLFSVVNP-LDTVVQLGVHLSPVVKNSYNVSLVYTQADQN 141 (1022) Q Consensus 64 Ay~f~~~a~l~~pt~~~fP~~~~-eFSilaT~R~~~~~~g~LfsV~~~-~~~~~qlgl~l~~~~~~~~~i~L~Y~~~~~~ 141 (1022) +..|...+.+..+....++..+. +|+|.++||.... .+.||...+. .....++.|.|... .|.|.|....+. T Consensus 11 ~~~F~g~syl~~~~~~~~~~~~~~~~~isl~frT~~~-~GlLl~~~~~~~~~~d~~~l~l~~G-----~l~~~~~~g~~~ 84 (189) T 3pve_A 11 LADFNGFSYLELKGLHTFERDLGEKMALEMVFLARGP-SGLLLYNGQKTDGKGDFVSLALHNR-----HLEFRYDLGKGA 84 (189) T ss_dssp CEEEESSCEEEECCGGGC-------CEEEEEEEESSS-CEEEEEEESCC-CCSCEEEEEEETT-----EEEEEEESSSCE T ss_pred eeEECCCceEEEcCcccccccccceEEEEEEEecCCC-CeEEEEecCCCCCCCCeEEEEEECC-----EEEEEEECCCCe Confidence 35666556666665555544455 8999999997654 4688877753 13356888888754 477777643321 Q ss_pred cceeEeeeecccCCCCeeEEEEEEeCCeEEEEEcCccceeeeccCCCcceeccCCeeEEEEecccc--------cCCccc Q FBpp0308936 142 IGRKLASFGVAHVPDKWNSIALQVLSDKVSFYYDCELRNTTLVTREPIELVFDSASTLYIGQAGSI--------IGGKFE 213 (1022) Q Consensus 142 ~~~~~~sF~v~ladg~WHrlaLsV~g~~VtLyVDC~~~~t~~l~r~~~~l~~~~~~~l~iGq~g~~--------~~~~F~ 213 (1022) ..+.....+.|++||+|+|...+..++||||+....+...+.....+. ....||||..... ....|. T Consensus 85 ---~~~~s~~~v~Dg~WH~V~v~~~~~~~~L~vD~~~~~~~~~~~~~~~l~--~~~~l~iGG~~~~~~~~~~~~~~~~F~ 159 (189) T 3pve_A 85 ---AIIRSKEPIALGTWVRVFLERNGRKGALQVGDGPRVLGESPVPHTMLN--LKEPLYVGGAPDFSKLARGAAVASGFD 159 (189) T ss_dssp ---EEEECSSCCCTTSEEEEEEEEETTEEEEEETTSCCEEEECCSSCCCCC--CCSCEEESCCSCGGGSCGGGCCCSBCE T ss_pred ---EEEeCCCcccCCCeEEEEEEEeCCEEEEEECCCceeeeEcCCCcceec--CCCCEEECccCChhhcccccccCCCCe Confidence 223346778899999999999999999999998766544433222332 2467999865221 135699 Q ss_pred cceeeeEEeeC Q FBpp0308936 214 GYLEKINVYGN 224 (1022) Q Consensus 214 G~LQ~L~i~~d 224 (1022) |-|++|+|... T Consensus 160 GCi~~v~i~~~ 170 (189) T 3pve_A 160 GAIQLVSLRGH 170 (189) T ss_dssp EEEEEEEETTE T ss_pred EEeeEEEECCE Confidence 99999998543No 13>1pz7_A Agrin; structural protein; 1.42A {Gallus gallus} SCOP: b.29.1.4 PDB: 1pz8_A 1pz9_A 1q56_A Probab=98.81 E-value=7.9e-08 Score=100.53 Aligned_cols=125 Identities=13% Similarity=0.162 Sum_probs=87.6 Q ss_pred ceEEEEEEeecCCCCceEEEEEcCCCCeEEEEEEEcccccCceeEEEEEeeccCCcceeEeeeecccCCCCeeEEEEEEe Q FBpp0308936 87 EFAILITFRQSSLKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLASFGVAHVPDKWNSIALQVL 166 (1022) Q Consensus 87 eFSilaT~R~~~~~~g~LfsV~~~~~~~~qlgl~l~~~~~~~~~i~L~Y~~~~~~~~~~~~sF~v~ladg~WHrlaLsV~ 166 (1022) +|+|.++||... ..+.||...+..+...+|.|+|..- .|.|.|...++. ..+.....+.|++||+|+|... T Consensus 49 ~~~is~~frT~~-~~GlLl~~~~~~~~~d~~~l~l~~G-----~l~~~~~~g~g~---~~l~s~~~v~Dg~WH~V~v~~~ 119 (204) T 1pz7_A 49 SNHFELSIKTEA-TQGLILWSGKGLERSDYIALAIVDG-----FVQMMYDLGSKP---VVLRSTVPINTNHWTHIKAYRV 119 (204) T ss_dssp EEEEEEEEEECC-SSEEEEEESCCSTTCCEEEEEEETT-----EEEEEEESSSCC---EEEEEEEECCSSSCEEEEEEEE T ss_pred ceEEEEEEEeCC-CCeEEEEecCCCCCCceEEEEEECC-----EEEEEEECCCCe---EEEECCccccCCCcEEEEEEEE Confidence 789999999764 4567776655323567888888754 477777644332 2233467889999999999999 Q ss_pred CCeEEEEEcCccceeeeccCCCcceeccCCeeEEEEecccc---------cCCccccceeeeEEe Q FBpp0308936 167 SDKVSFYYDCELRNTTLVTREPIELVFDSASTLYIGQAGSI---------IGGKFEGYLEKINVY 222 (1022) Q Consensus 167 g~~VtLyVDC~~~~t~~l~r~~~~l~~~~~~~l~iGq~g~~---------~~~~F~G~LQ~L~i~ 222 (1022) +..++||||+....+...+.....+. ....||||..... ....|.|-|++|+|. T Consensus 120 ~~~~~L~VD~~~~~~~~~~~~~~~l~--~~~~l~lGG~~~~~~~~~~~~~~~~~F~GCi~~v~in 182 (204) T 1pz7_A 120 QREGSLQVGNEAPITGSSPLGATQLD--TDGALWLGGMERLSVAHKLPKAYSTGFIGCIRDVIVD 182 (204) T ss_dssp TTEEEEEETTSCCEEEECCSSCCCEE--ECCEEEESSCSCCSTTTTSCGGGGSBCEEEEEEEEET T ss_pred eCEEEEEECCeeeEeeecCCCcceec--CCCCEEECCCCccccccccccccCCCCeEEEeEEEEC Confidence 99999999998876544433222333 3568999875221 124699999999994No 14>4pbp_A C-reactive protein; acute phase protein, pentraxin; 1.65A {Danio rerio} PDB: 4pbo_A Probab=98.80 E-value=7.1e-08 Score=100.70 Aligned_cols=158 Identities=17% Similarity=0.172 Sum_probs=101.4 Q ss_pred EEccCCCCCcceEecCC---CccCCchhhccCCCCcceEEEEEEeecCC--CCceEEEEEcCCCCeEEEEEEEcccccCc Q FBpp0308936 54 EFGEAEDGFPAFRFLQT---ADVKSPYRMLLPEKLYEFAILITFRQSSL--KGGYLFSVVNPLDTVVQLGVHLSPVVKNS 128 (1022) Q Consensus 54 ~~v~G~d~~pAy~f~~~---a~l~~pt~~~fP~~~~eFSilaT~R~~~~--~~g~LfsV~~~~~~~~qlgl~l~~~~~~~ 128 (1022) +++.|.. ..|+.|... ..+..+... +....+|+|.+++|+... ....||+..+.. .. .|.|.+... T Consensus 2 ~~~~g~~-g~al~F~g~s~~~~v~~~~~~--~~~~~~fTi~~Wvk~~~~~~~~~~i~s~~~~~-~~-~~~l~~~~~---- 72 (210) T 4pbp_A 2 EFFKNLS-GKVLQFKTATDNSYVKLYPEK--PLSLSAFTLCMRVATELPLDREVILFAYYTPD-VD-ELNVWRERD---- 72 (210) T ss_dssp ---CCCT-TEEEEECSCCSSCEEEEECSS--CCCBSEEEEEEEEECCSCTTSCEEEEEEEETT-EE-EEEEEECTT---- T ss_pred eeeeccc-CcEEECCCCCccCeEEEcCCC--CCCcCCEEEEEEEEcCCCCCCCceEEEEEcCC-CC-cEEEEEcCC---- Confidence 3444433 357788753 333333221 111229999999999766 467899988753 22 666665532 Q ss_pred eeEEEEEeeccCCcceeEeeeecccCCCCeeEEEEEEeCC--eEEEEEcCccceeeeccCCCcceeccCCeeEEEEeccc Q FBpp0308936 129 YNVSLVYTQADQNIGRKLASFGVAHVPDKWNSIALQVLSD--KVSFYYDCELRNTTLVTREPIELVFDSASTLYIGQAGS 206 (1022) Q Consensus 129 ~~i~L~Y~~~~~~~~~~~~sF~v~ladg~WHrlaLsV~g~--~VtLyVDC~~~~t~~l~r~~~~l~~~~~~~l~iGq~g~ 206 (1022) ..+.|.....+. .+.+...+.+++||||++...+. .++||||.+++.+..+... ..+.....++||+... T Consensus 73 ~~~~~~~~~~~~-----~~~~~~~~~~~~W~hva~t~d~~~g~~~lYvnG~~~~~~~~~~~---~~~~~~~~l~iG~~~~ 144 (210) T 4pbp_A 73 GRVSLYIQSSKD-----AAFFRLPPLSTLQTHLCVAWESATGLTAFWMDGRRSLHQVYRKG---YSIRSGGTVVLGQDPD 144 (210) T ss_dssp SCEEEEESCSSC-----CEEECCCCCCSSCEEEEEEEETTTCEEEEEETTEECCCEECCTT---CCBCSSCEEEESSCCS T ss_pred CcEEEEEEcCCc-----eEEecCcccCCCEEEEEEEEECCCCcEEEEECCeEccCcccCCC---cEECCCCeEEEccccc Confidence 245565533321 12455677899999999999976 8999999999887544321 1234567899998632 Q ss_pred c------cCCccccceeeeEEeeCcccc Q FBpp0308936 207 I------IGGKFEGYLEKINVYGNPDAI 228 (1022) Q Consensus 207 ~------~~~~F~G~LQ~L~i~~dp~~a 228 (1022) . ....|.|.|.+|+|+.....+ T Consensus 145 ~~gg~~~~~~~f~G~idevri~~~aLs~ 172 (210) T 4pbp_A 145 SYVGSFDVDQSFVGEIANLQMWDYVLSS 172 (210) T ss_dssp BTTBCCCGGGCCCEEEEEEEEESSCCCH T ss_pred cCCCccCccccceEEecceEEecccCCH Confidence 1 235799999999999887443No 15>3flp_A SAP-like pentraxin; physiological doubly-stacked heptamer, pentraxin fold, cyclic heptamer, invertebrate lectin, sugar binding protein; 2.30A {Limulus polyphemus} PDB: 3flr_A 3flt_A Probab=98.73 E-value=2.2e-07 Score=97.29 Aligned_cols=158 Identities=15% Similarity=0.179 Sum_probs=102.8 Q ss_pred CcceEecCC---CccCCchhhccCCCCcceEEEEEEeecCCCCceEEEEEcCCCCeEEEEEEEcccccCceeEEEEEeec Q FBpp0308936 62 FPAFRFLQT---ADVKSPYRMLLPEKLYEFAILITFRQSSLKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQA 138 (1022) Q Consensus 62 ~pAy~f~~~---a~l~~pt~~~fP~~~~eFSilaT~R~~~~~~g~LfsV~~~~~~~~qlgl~l~~~~~~~~~i~L~Y~~~ 138 (1022) ..|+.|... +.+..+....|+ ...+|+|.++||+.......||+..+. .....|.|.+.........+.|+. . T Consensus 6 ~~al~F~G~s~~~yv~~~~~~~l~-~~~~fTi~~Wvk~~~~~~~~i~s~~~~-~~~~~~~l~~~~~~~~~~~~~~~~--~ 81 (217) T 3flp_A 6 DVKISFPGTQNPKFPHLRFMQTLP-AVRQLTVCQRIKPFHRNTGYIFSCATS-NQDNQFITSMYVKSDGTLNLGLQV--N 81 (217) T ss_dssp GEEEEECCCBTTBCCEEEESSCBC-CBSEEEEEEEEEESCSSCEEEEEEEET-TEEEEEEEEEEECTTSEEEEEEEE--T T ss_pred CeEEECCCCCccCeEEeccCCCCC-CcCeEEEEEEEEeCCCCCcEEEEEECC-CCCCeEEEEEccCCCcceEEEEEE--C Confidence 457788753 445555443333 123999999999977566679998875 334566666654322222344443 3 Q ss_pred cCCcceeEeeeecccCCCCeeEEEEEEeCC--eEEEEEcCccceeee-ccCCCcceeccCCeeEEEEecccc------cC Q FBpp0308936 139 DQNIGRKLASFGVAHVPDKWNSIALQVLSD--KVSFYYDCELRNTTL-VTREPIELVFDSASTLYIGQAGSI------IG 209 (1022) Q Consensus 139 ~~~~~~~~~sF~v~ladg~WHrlaLsV~g~--~VtLyVDC~~~~t~~-l~r~~~~l~~~~~~~l~iGq~g~~------~~ 209 (1022) +.. ...+.....+.+++||||++...+. .++||||.+++.+.. +.. ...+.....++||+.... .. T Consensus 82 g~~--~~~~~~~~~~~~~~W~hva~t~d~~~g~~~lYvnG~~~~~~~~~~~---~~~~~~~~~l~iG~~~~~~gg~~~~~ 156 (217) T 3flp_A 82 ASS--NKYISCPIEIELGQWYHVCHVWSGVDGRMAVYANGSPCGTMENVGK---GHQISAGGTVVIGQEQDKIGGGFEEQ 156 (217) T ss_dssp TCC--CEEEEEEEECCTTSCEEEEEEEETTTTEEEEEETTEEEEEESCSST---TCCBCSCBEEEESSCCSBTTBCCCGG T ss_pred Ccc--ceEEecCCccCCCCEEEEEEEEECCCCeEEEEECCEEcccccccCc---CcEeCCCCeEEECcccccCCCCcCcC Confidence 322 1223345677899999999999986 899999999987732 221 112345678999986321 23 Q ss_pred CccccceeeeEEeeCcccc Q FBpp0308936 210 GKFEGYLEKINVYGNPDAI 228 (1022) Q Consensus 210 ~~F~G~LQ~L~i~~dp~~a 228 (1022) ..|.|.|.+|+|+..+... T Consensus 157 ~~f~G~idevri~~~aLs~ 175 (217) T 3flp_A 157 ESWSGELSDLQVWDEALTT 175 (217) T ss_dssp GCCCEEEEEEEEESSCCCH T ss_pred CCceEEeeeEEEECccCCH Confidence 5799999999999887544No 16>2h0b_A Neurexin-1-alpha; B-sandwich, cell adhesion; 2.10A {Bos taurus} SCOP: b.29.1.4 Probab=98.71 E-value=2.5e-07 Score=94.96 Aligned_cols=127 Identities=18% Similarity=0.259 Sum_probs=88.1 Q ss_pred ceEEEEEEeecCCCCceEEEEEcCCCCeEEEEEEEcccccCceeEEEEEeeccCCcceeEee-eecccCCCCeeEEEEEE Q FBpp0308936 87 EFAILITFRQSSLKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLAS-FGVAHVPDKWNSIALQV 165 (1022) Q Consensus 87 eFSilaT~R~~~~~~g~LfsV~~~~~~~~qlgl~l~~~~~~~~~i~L~Y~~~~~~~~~~~~s-F~v~ladg~WHrlaLsV 165 (1022) +|+|.++||... ..+.||..- +...+|.|+|..- .|.|.|...++.. ...+. -...+.|++||+|+|.. T Consensus 29 ~~~i~l~frT~~-~~GlLl~~~---~~~d~~~l~l~~G-----~l~~~~~~g~g~~-~~~~~~~~~~l~Dg~WH~V~v~~ 98 (184) T 2h0b_A 29 SDEITLSFKTLQ-RNGLMLHTG---KSADYVNLALKNG-----AVSLVINLGSGAF-EALVEPVNGKFNDNAWHDVKVTR 98 (184) T ss_dssp EEEEEEEEEESC-SCEEEEEEC---CTTEEEEEEEETT-----EEEEEEEESSCEE-EEEECCSSSCSSSSSCEEEEEEE T ss_pred ccEEEEEEEeCC-CCEEEEEec---CCCCEEEEEEECC-----EEEEEEECCCCeE-EEEEccCCCcccCCCeEEEEEEE Confidence 799999999765 557888652 4567888988764 4777776543221 11121 24678899999999999 Q ss_pred eCCeEEEEEcCccceeeeccCCCcceeccCCeeEEEEecccc-------cCCccccceeeeEEeeCc Q FBpp0308936 166 LSDKVSFYYDCELRNTTLVTREPIELVFDSASTLYIGQAGSI-------IGGKFEGYLEKINVYGNP 225 (1022) Q Consensus 166 ~g~~VtLyVDC~~~~t~~l~r~~~~l~~~~~~~l~iGq~g~~-------~~~~F~G~LQ~L~i~~dp 225 (1022) .+..++||||+....+...+.....+. ....||||..... ....|.|-|++|+|...+ T Consensus 99 ~~~~~~L~VD~~~~~~~~~~~~~~~l~--~~~~l~iGG~~~~~~~~~~~~~~~F~GCi~~v~i~~~~ 163 (184) T 2h0b_A 99 NLRQVTISVDGILTTTGYTQEDYTMLG--SDDFFYVGGSPSTADLPGSPVSNNFMGCLKEVVYKNND 163 (184) T ss_dssp ETTEEEEEETTTEEEEEECSTTCCCEE--ECSEEEESCCTTGGGSTTCSCCCBCEEEEEEEEEEESS T ss_pred eCCEEEEEECCeeeeeeeCCCCceeec--CCCCEEECCCCccccccCCcccCCCEEEeeEEEECCEE Confidence 999999999999876544433222232 2457999876321 124699999999997654No 17>4avs_A Serum amyloid P-component; sugar binding protein, glycoprotein, disulfide bond, lectin, metal-binding; HET: NAG N7P; 1.40A {Homo sapiens} SCOP: b.29.1.5 PDB: 1lgn_A* 1gyk_A 2a3w_A* 2a3x_A* 2a3y_A* 1sac_A* 3d5o_A* 2w08_A* 3kqr_A* 4avt_A* 4avv_A* 4ayu_A* Probab=98.67 E-value=4.2e-07 Score=94.49 Aligned_cols=127 Identities=13% Similarity=0.061 Sum_probs=89.9 Q ss_pred ceEEEEEEeecCCCCceEEEEEcCCCCeEEEEEEEcccccCceeEEEEEeeccCCcceeEeeeecccCCCCeeEEEEEEe Q FBpp0308936 87 EFAILITFRQSSLKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLASFGVAHVPDKWNSIALQVL 166 (1022) Q Consensus 87 eFSilaT~R~~~~~~g~LfsV~~~~~~~~qlgl~l~~~~~~~~~i~L~Y~~~~~~~~~~~~sF~v~ladg~WHrlaLsV~ 166 (1022) +|||.+++|+.......||+..+. .....|.|.+... ..+.|.. .+ ..+.+...+.+++||||++... T Consensus 32 ~fTi~~Wvk~~~~~~~~i~s~~~~-~~~~~~~l~~~~~----~~~~~~~--~~-----~~~~~~~~~~~~~W~Hva~t~d 99 (204) T 4avs_A 32 NFTLCFRAYSDLSRAYSLFSYNTQ-GRDNELLVYKERV----GEYSLYI--GR-----HKVTSKVIEKFPAPVHICVSWE 99 (204) T ss_dssp EEEEEEEEECCCCSCEEEEEEEET-TEEEEEEEEEEET----TEEEEEE--TT-----EEEEEECCCCSSCCEEEEEEEE T ss_pred CEEEEEEEEcCCCCCcEEEEEEcC-CCCceEEEEEeCC----CeEEEEE--CC-----EEEEecccccCCCEEEEEEEEE Confidence 999999999887677889998875 3334555555332 2455554 22 1234557778999999999999 Q ss_pred CC--eEEEEEcCccceeeeccCCCcceeccCCeeEEEEecccc------cCCccccceeeeEEeeCcccc Q FBpp0308936 167 SD--KVSFYYDCELRNTTLVTREPIELVFDSASTLYIGQAGSI------IGGKFEGYLEKINVYGNPDAI 228 (1022) Q Consensus 167 g~--~VtLyVDC~~~~t~~l~r~~~~l~~~~~~~l~iGq~g~~------~~~~F~G~LQ~L~i~~dp~~a 228 (1022) +. .++||||++++.+..+... ..+.....++||+.... ....|.|.|.+|+|+..+..+ T Consensus 100 ~~~g~~~lYvnG~~~~~~~~~~~---~~~~~~~~l~iG~~~~~~gg~~~~~~~f~G~idevri~~~aLs~ 166 (204) T 4avs_A 100 SSSGIAEFWINGTPLVKKGLRQG---YFVEAQPKIVLGQEQDSYGGKFDRSQSFVGEIGDLYMWDSVLPP 166 (204) T ss_dssp TTTCEEEEEETTEECCCEECCTT---CCBCSSCEEEESSCCSSSSCCCCGGGCCCEEEEEEEEESSCCCH T ss_pred CCCCeEEEEECCeEecccccCCC---ceECCCceEEEcccccccCccccCCccceEEeceeEEECccCCH Confidence 76 8999999999987544321 12345678999986321 135799999999999987543No 18>2r16_A Neurexin-1-alpha; beta-sandwich, cell adhesion, splicing; 1.04A {Bos taurus} Probab=98.65 E-value=4.5e-07 Score=93.10 Aligned_cols=125 Identities=16% Similarity=0.222 Sum_probs=89.0 Q ss_pred ceEEEEEEeecCCCCceEEEEEcCCCCeEEEEEEEcccccCceeEEEEEeeccCCcceeEeeeecccCCCCeeEEEEEEe Q FBpp0308936 87 EFAILITFRQSSLKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLASFGVAHVPDKWNSIALQVL 166 (1022) Q Consensus 87 eFSilaT~R~~~~~~g~LfsV~~~~~~~~qlgl~l~~~~~~~~~i~L~Y~~~~~~~~~~~~sF~v~ladg~WHrlaLsV~ 166 (1022) .|+|.++||.. ...+.||...+. +...+|.|+|..- .|.|.|...++. ..+.....+.|++||+|.|... T Consensus 28 ~~~isl~frT~-~~~GlLl~~~~~-~~~d~l~l~L~~G-----~l~~~~~~g~~~---~~~~~~~~l~Dg~WH~V~v~~~ 97 (182) T 2r16_A 28 AEDVSLRFRSQ-RAYGILMATTSR-DSADTLRLELDAG-----RVKLTVNLGKGP---ETLFAGYNLNDNEWHTVRVVRR 97 (182) T ss_dssp EEEEEEEEECS-CSSEEEEEEECS-SSCCEEEEEEETT-----EEEEEEESSSCC---EEEEECSSCCSSSCEEEEEEEE T ss_pred ccEEEEEEEeC-CCCEEEEEcCCC-CCCCEEEEEEECC-----EEEEEEEcCCcc---eEeccCCcccCCCcEEEEEEEE Confidence 78999999976 456899988874 4467888888654 477777653322 2233467888999999999999 Q ss_pred CCeEEEEEcCccceeeeccCCCcceeccCCeeEEEEeccc-----ccCCccccceeeeEEeeC Q FBpp0308936 167 SDKVSFYYDCELRNTTLVTREPIELVFDSASTLYIGQAGS-----IIGGKFEGYLEKINVYGN 224 (1022) Q Consensus 167 g~~VtLyVDC~~~~t~~l~r~~~~l~~~~~~~l~iGq~g~-----~~~~~F~G~LQ~L~i~~d 224 (1022) +..++|+||+....+...+.....+.++ .||+|-... .....|+|-|++|+|-.. T Consensus 98 ~~~~~L~VD~~~~~~~~~~~~~~~l~~~---~l~~Gg~~~~~~~~~~~~~F~GCi~~v~in~~ 157 (182) T 2r16_A 98 GKSLKLTVDDQQAMTGQMAGDHTRLEFH---NIETGIITERRYLSSVPSNFIGHLQSLTFNGM 157 (182) T ss_dssp TTEEEEEETTCCEEEEECCSSCCCEEEE---EEEESSCCCCTTCSSCCCCCEEEEEEEEETTE T ss_pred CCEEEEEEeCCceeeEEcCCCCcEEEec---ceEEcCcccccccCCCCCCCEEEEeEEEECCE Confidence 9999999999987665554433344442 288875421 122469999999999543No 19>3bod_A Neurexin-1-alpha; neurexin1D, LNS6, alternative splicing, calcium, cell adhesion, EGF-like domain, glycoprotein, membrane, metal- binding; 1.70A {Mus musculus} SCOP: b.29.1.4 PDB: 3vkf_C* 2xb6_C* 2wqz_C* 1c4r_A 3bop_A 3mw4_A* Probab=98.63 E-value=5.6e-07 Score=92.34 Aligned_cols=126 Identities=17% Similarity=0.184 Sum_probs=87.7 Q ss_pred ceEEEEEEeecCCCCceEEEEEcCCCCeEEEEEEEcccccCceeEEEEEeeccCCcceeEeeeecccCCCCeeEEEEEEe Q FBpp0308936 87 EFAILITFRQSSLKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLASFGVAHVPDKWNSIALQVL 166 (1022) Q Consensus 87 eFSilaT~R~~~~~~g~LfsV~~~~~~~~qlgl~l~~~~~~~~~i~L~Y~~~~~~~~~~~~sF~v~ladg~WHrlaLsV~ 166 (1022) .++|.+.||... ..+.||...+......+|.|+|..- .|.|.|...++.. .+......+.|++||+|.|... T Consensus 30 ~~~isl~frT~~-~~GlLl~~~~~~~~~d~l~l~L~~G-----~l~~~~~~g~~~~--~~~~~~~~l~Dg~WH~V~v~r~ 101 (178) T 3bod_A 30 ADRLAIGFSTVQ-KEAVLVRVDSSSGLGDYLELHIHQG-----KIGVKFNVGTDDI--AIEESNAIINDGKYHVVRFTRS 101 (178) T ss_dssp EEEEEEEEECCC-SSEEEEEEEESSSSCCEEEEEEETT-----EEEEEEESSSCCE--EEECCSSCCCSSSCEEEEEEEE T ss_pred CCEEEEEEEECC-CCEEEEEEcCCCCCCCEEEEEEECC-----EEEEEEEcCCCcE--EEecCCcccCCCCcEEEEEEEe Confidence 678888888654 4678888877423457888888654 4778886543321 2212367888999999999999 Q ss_pred CCeEEEEEcCcccee-eeccCCCcceeccCCeeEEEEecccccCCccccceeeeEEeeC Q FBpp0308936 167 SDKVSFYYDCELRNT-TLVTREPIELVFDSASTLYIGQAGSIIGGKFEGYLEKINVYGN 224 (1022) Q Consensus 167 g~~VtLyVDC~~~~t-~~l~r~~~~l~~~~~~~l~iGq~g~~~~~~F~G~LQ~L~i~~d 224 (1022) +..++|+|||....+ ...+..... ++....||||... ....|+|-|++|+|-.- T Consensus 102 ~~~~~L~VD~~~~~~~~~~~~~~~~--l~~~~~l~iGG~~--~~~~F~GCi~~v~in~~ 156 (178) T 3bod_A 102 GGNATLQVDSWPVIERYPAGRQLTI--FNSQATIIIGGKE--QGQPFQGQLSGLYYNGL 156 (178) T ss_dssp TTEEEEEETTSCCEEECCCSCCCCC--BCCEEEEEESCCT--TSCBCCEEEEEEEETTE T ss_pred CCEEEEEECCceeeeEecCCCcceE--ecCCCCEEEeCcc--CCCCCeEEEceEEECCe Confidence 999999999987533 233322222 3335679999862 23679999999998543No 20>3pvn_A C-reactive protein; pentraxin family, immune system; 1.98A {Homo sapiens} SCOP: b.29.1.5 PDB: 1gnh_A 1lj7_A 3l2y_A 1b09_A 3pvo_A Probab=98.62 E-value=6.3e-07 Score=93.23 Aligned_cols=127 Identities=16% Similarity=0.156 Sum_probs=89.5 Q ss_pred ceEEEEEEeecCC--CCceEEEEEcCCCCeEEEEEEEcccccCceeEEEEEeeccCCcceeEeeeecccCCCCeeEEEEE Q FBpp0308936 87 EFAILITFRQSSL--KGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLASFGVAHVPDKWNSIALQ 164 (1022) Q Consensus 87 eFSilaT~R~~~~--~~g~LfsV~~~~~~~~qlgl~l~~~~~~~~~i~L~Y~~~~~~~~~~~~sF~v~ladg~WHrlaLs 164 (1022) +|||.+++|+... ....||+..+. .....|.|.+... ..+.|.. .+ ....+...+.+++||||++. T Consensus 32 ~fTi~~Wvk~~~~~~~~~~i~s~~~~-~~~~~~~l~~~~~----~~~~~~~--~~-----~~~~~~~~~~~~~W~hva~t 99 (206) T 3pvn_A 32 AFTVCLHFYTELSSTRGYSIFSYATK-RQDNEILIFWSKD----IGYSFTV--GG-----SEILFEVPEVTVAPVHICTS 99 (206) T ss_dssp EEEEEEEEEESGGGTCCEEEEEEEET-TEEEEEEEEEETT----TEEEEEE--TT-----EEEEEECSSCCSSCEEEEEE T ss_pred cEEEEEEEEeCCCCCCCcEEEEEECC-CCCCEEEEEEeCC----CEEEEEE--CC-----eeeEeecccCCCCcEEEEEE Confidence 9999999999764 67789998874 3344555655432 2355544 22 12344577789999999999 Q ss_pred EeCC--eEEEEEcCccceeeeccCCCcceeccCCeeEEEEeccc------ccCCccccceeeeEEeeCcccc Q FBpp0308936 165 VLSD--KVSFYYDCELRNTTLVTREPIELVFDSASTLYIGQAGS------IIGGKFEGYLEKINVYGNPDAI 228 (1022) Q Consensus 165 V~g~--~VtLyVDC~~~~t~~l~r~~~~l~~~~~~~l~iGq~g~------~~~~~F~G~LQ~L~i~~dp~~a 228 (1022) ..+. .++||||.+++.+..+... ..+.....++||+... .....|.|.|.+|+|+...... T Consensus 100 ~d~~~g~~~lYvnG~~~~~~~~~~~---~~~~~~~~l~iG~~~~~~gg~~~~~~~f~G~idevri~~~aLs~ 168 (206) T 3pvn_A 100 WESASGIVEFWVDGKPRVRKSLKKG---YTVGAEASIILGQEQDSFGGNFEGSQSLVGDIGNVNMWDFVLSP 168 (206) T ss_dssp EETTTCEEEEEETTEECCCEECCTT---CCBCSSCEEEESSCCSBTTBCCCGGGCCCEEEEEEEEESSCCCH T ss_pred EECCCceEEEEECCcCcccccccCC---ceECCCCEEEEeeccccCCCCcccccceEEEecceEEEcccCCH Confidence 9975 8999999999887544321 1234567899998631 1235799999999999887443No 21>4c1w_A Neuraminidase; sugar binding protein, carbohydrate-binding module, sialic A binding; HET: SLT; 1.84A {Streptococcus pneumoniae} PDB: 4c1x_A* Probab=98.47 E-value=1.8e-06 Score=88.90 Aligned_cols=137 Identities=16% Similarity=0.148 Sum_probs=88.6 Q ss_pred cceEEEEEEeecC--CCCceEEEEEcCCCCeEEEEEEEcccccCceeEEEEEeeccCCcc-eeEeeeecccCCCCeeEEE Q FBpp0308936 86 YEFAILITFRQSS--LKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIG-RKLASFGVAHVPDKWNSIA 162 (1022) Q Consensus 86 ~eFSilaT~R~~~--~~~g~LfsV~~~~~~~~qlgl~l~~~~~~~~~i~L~Y~~~~~~~~-~~~~sF~v~ladg~WHrla 162 (1022) .+|+|.++||+.. .....||++.+......+|.|.+... ...|.+....+... ...+.-...+.+++||||+ T Consensus 33 ~~fTv~~Wvk~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~-----~~~~~~~~~~g~~~~~~~~~~~~~~~~g~W~Hva 107 (188) T 4c1w_A 33 ENATVHMEFKPDAKAPAFYNLFSVSSATKKDEYFTMAVYNN-----TATLEGRGSDGKQFYNNYNDAPLKVKPGQWNSVT 107 (188) T ss_dssp SSEEEEEEEEECSSCCSEEEEEEEECSSCTTCEEEEEEETT-----EEEEEEECTTCCBSSCCCTTCSCBCCTTSCEEEE T ss_pred CCeEEEEEEECCCCCCCccEEEEccCCcccCceEEEEEeCC-----ccEEEEEECCCCeEeccccccccccCCCCEEEEE Confidence 3999999999976 45567999887543345777777654 12344443222110 0011113456799999999 Q ss_pred EEEeC-------CeEEEEEcCccceeeeccCCCcceeccCCeeEEEEeccccc--CCccccceeeeEEeeCcccc Q FBpp0308936 163 LQVLS-------DKVSFYYDCELRNTTLVTREPIELVFDSASTLYIGQAGSII--GGKFEGYLEKINVYGNPDAI 228 (1022) Q Consensus 163 LsV~g-------~~VtLyVDC~~~~t~~l~r~~~~l~~~~~~~l~iGq~g~~~--~~~F~G~LQ~L~i~~dp~~a 228 (1022) +...+ ..++||||.+++.+......+. ..+.....++||+..... ...|.|.|.+|+|+...... T Consensus 108 ~t~d~~~~~~~~~~~~lYvnG~~~~~~~~~~~~~-~~~~~~~~~~iG~~~~~g~~~~~f~G~idevriy~~aLs~ 181 (188) T 4c1w_A 108 FTVEKPTAELPKGRVRLYVNGVLSRTSLRSGNFI-KDMPDVTHVQIGATKRANNTVWGSNLQIRNLTVYNRALTP 181 (188) T ss_dssp EEEECCCSSSTTCEEEEEETTEEEEEECSCCCCG-GGCTTCCEEEEESEEETTEEECCCCEEEEEEEEESSCCCH T ss_pred EEEeCCcccCCCceEEEEECCEEeeeeeccCCcc-ccCCCCccEEECccccCCCcccccccEEeeEEEECCcCCH Confidence 99999 8999999999988742221111 112235689999862211 13599999999999876543No 22>2v73_A CBM40, putative EXO-alpha-sialidase; carbohydrate-binding module, bacterial pathogen, sialic acid, sugar-binding protein; HET: SIA; 2.2A {Clostridium perfringens} Probab=98.46 E-value=4.7e-06 Score=86.78 Aligned_cols=135 Identities=16% Similarity=0.147 Sum_probs=89.3 Q ss_pred cceEEEEEEeecCCCCceEEEEEcCCCCeEEEEEEEcccccCceeEEEEEeeccCCccee-EeeeecccCCCCeeEEEEE Q FBpp0308936 86 YEFAILITFRQSSLKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRK-LASFGVAHVPDKWNSIALQ 164 (1022) Q Consensus 86 ~eFSilaT~R~~~~~~g~LfsV~~~~~~~~qlgl~l~~~~~~~~~i~L~Y~~~~~~~~~~-~~sF~v~ladg~WHrlaLs 164 (1022) .+|||.++||+.......||++.+......+|.|.+... ++.|.+.......... .....+.+.+ +||||++. T Consensus 40 ~~fTvs~Wvk~~~~~~~~lfs~~~~~~~~~~~~l~~~~g-----~l~~~~~~~~~~~~~~~~~~~~~~~~~-~W~Hva~t 113 (191) T 2v73_A 40 EEGTIVTRFNMNDTSIQSLIGLSDGNKANNYFSLYVSGG-----KVGYELRRQEGNGDFNVHHSADVTFNR-GINTLALK 113 (191) T ss_dssp SSEEEEEEEEECCCSCEEEEEEECTTCSSCEEEEEECSS-----EEEEEEEECTTSSCEEEEEEEECCCCS-SCEEEEEE T ss_pred CCEEEEEEEEeCCCCceEEEEecCCCCcCcEEEEEEECC-----EEEEEEEecCCCcceeeecccccccCC-ceEEEEEE Confidence 399999999998755567999987644445677777632 4666665543221111 1112333345 99999999 Q ss_pred EeC-CeEEEEEcCccceeeeccC-CCcceeccCCeeEEEEecccc---cCCccccceeeeEEeeCcccc Q FBpp0308936 165 VLS-DKVSFYYDCELRNTTLVTR-EPIELVFDSASTLYIGQAGSI---IGGKFEGYLEKINVYGNPDAI 228 (1022) Q Consensus 165 V~g-~~VtLyVDC~~~~t~~l~r-~~~~l~~~~~~~l~iGq~g~~---~~~~F~G~LQ~L~i~~dp~~a 228 (1022) ..+ ..++||||-+++.+..... .... .+ ....++||+.... ....|.|.|.+|+|+....-+ T Consensus 114 ~d~~~~~~lYvnG~~~~~~~~~~~~~~~-~~-~~~~~~iG~~~~~~g~~~~~f~G~Idevri~~~aLs~ 180 (191) T 2v73_A 114 IEKGIGAKIFLNGSLVKTVSDPNIKFLN-AI-NLNSGFIGKTDRANGYNEYLFRGNIDFMNIYDKPVSD 180 (191) T ss_dssp EETTTEEEEEETTEEEEEEECTTCCCGG-GS-CCCEEEESSCCCCSSSCCCCCCEEEEEEEEESSCCCH T ss_pred EeCCCcEEEEECCEEeeeeccCCccccc-cc-CCceEEECCCCCCCCccCcCCceEEeEEEEECCcCCH Confidence 998 7899999999988765532 1110 11 3457999986321 134699999999999776443No 23>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus} Probab=98.40 E-value=3e-06 Score=98.13 Aligned_cols=127 Identities=15% Similarity=0.149 Sum_probs=87.7 Q ss_pred ceEEEEEEeecCCCCceEEEEEcCCCCeEEEEEEEcccccCceeEEEEEeeccCCcceeEeee-ecccCCCCeeEEEEEE Q FBpp0308936 87 EFAILITFRQSSLKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLASF-GVAHVPDKWNSIALQV 165 (1022) Q Consensus 87 eFSilaT~R~~~~~~g~LfsV~~~~~~~~qlgl~l~~~~~~~~~i~L~Y~~~~~~~~~~~~sF-~v~ladg~WHrlaLsV 165 (1022) .+.|.+.||.. ...+.||.+.+......+|.|.|..- .|.|.|....+. ..+.+ ...+.||+||+|.|+. T Consensus 250 ~~~isl~frT~-~~~GlLl~~~~~~~~~~~l~l~l~~G-----~l~~~~~~g~~~---~~~~~~~~~l~DG~WH~V~v~~ 320 (410) T 3asi_A 250 ADRLAIGFSTV-QKEAVLVRVDSSSGLGDYLELHIHQG-----KIGVKFNVGTDD---IAIEESNAIINDGKYHVVRFTR 320 (410) T ss_dssp EEEEEEEEECC-CSEEEEEEEEECTTCCCEEEEEEETT-----EEEEEEESSSSC---EEEECCSCCCCSSSCEEEEEEE T ss_pred ccEEEEEEEec-CCCeEEEEEecCCCCCcEEEEEEeCC-----EEEEEEECCCCC---eEEccCCcCCCCCCeEEEEEEE Confidence 45666777754 45689998877533457888888754 467777543321 22332 5788899999999999 Q ss_pred eCCeEEEEEcCccceeeeccCCCcceeccCCeeEEEEecccccCCccccceeeeEEeeCc Q FBpp0308936 166 LSDKVSFYYDCELRNTTLVTREPIELVFDSASTLYIGQAGSIIGGKFEGYLEKINVYGNP 225 (1022) Q Consensus 166 ~g~~VtLyVDC~~~~t~~l~r~~~~l~~~~~~~l~iGq~g~~~~~~F~G~LQ~L~i~~dp 225 (1022) .+..++|+|||..+.+....... ...+.....||||... ....|+|-|++|+|-..+ T Consensus 321 ~~~~~~L~VD~~~~~~~~~~~~~-~~~l~~~~~l~lGg~~--~~~~F~Gci~~v~in~~~ 377 (410) T 3asi_A 321 SGGNATLQVDSWPVIERYPAGRQ-LTIFNSQATIIIGGKE--QGQPFQGQLSGLYYNGLK 377 (410) T ss_dssp ETTEEEEEETTSCCEEECCSSCC-CCCBCCEEEEEESSTT--TTCCCCEEEEEEEETTBC T ss_pred ECCEEEEEECCccceeecCCCcc-cEEecCCceEEEcCCc--CCCCCEEEEEEEEECCHH Confidence 99999999999887653222111 1123446789999762 346799999999995543No 24>1d2s_A SHBG, sex hormone-binding globulin; steroid transport, laminin G-like domain, jellyroll, androgen binding protein (ABP); HET: DHT; 1.55A {Homo sapiens} SCOP: b.29.1.4 PDB: 1kdk_A* 1kdm_A* Probab=98.36 E-value=6.5e-06 Score=83.77 Aligned_cols=123 Identities=11% Similarity=0.013 Sum_probs=84.7 Q ss_pred ceEEEEEEeecCCCCceEEEEEcCCCCeEEEEEEEcccccCceeEEEEEeeccCCcceeEeeeecccCCCCeeEEEEEEe Q FBpp0308936 87 EFAILITFRQSSLKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLASFGVAHVPDKWNSIALQVL 166 (1022) Q Consensus 87 eFSilaT~R~~~~~~g~LfsV~~~~~~~~qlgl~l~~~~~~~~~i~L~Y~~~~~~~~~~~~sF~v~ladg~WHrlaLsV~ 166 (1022) +|+|.+.||... ..+.||...+. +...+|.|.|..- .|.|.|...++ ...+.....+.||+||+|.|... T Consensus 27 ~~~isl~frT~~-~~GlLl~~~~~-~~~d~l~l~L~~G-----~l~~~~~~g~~---~~~~~~~~~v~DG~WH~V~v~~~ 96 (170) T 1d2s_A 27 KTSSSFEVRTWD-PEGVIFYGDTN-PKDDWFMLGLRDG-----RPEIQLHNHWA---QLTVGAGPRLDDGRWHQVEVKME 96 (170) T ss_dssp CCEEEEEEEESC-SSEEEEEEEEE-TTTEEEEEEEETT-----EEEEEEESSSC---EEEEECSCCCCSSSCEEEEEEEE T ss_pred CcEEEEEEEECC-CCEEEEEeCCC-CCCCEEEEEEECC-----EEEEEEECCCc---cEEeeCCCccCCCCCEEEEEEEe Confidence 788888999764 45788887764 3467888888765 47777754432 12223356788999999999999 Q ss_pred CCeEEEEEcCccceeeeccCCCcceeccCCeeEEEEeccc-------ccCCccccceee-eEEeeCc Q FBpp0308936 167 SDKVSFYYDCELRNTTLVTREPIELVFDSASTLYIGQAGS-------IIGGKFEGYLEK-INVYGNP 225 (1022) Q Consensus 167 g~~VtLyVDC~~~~t~~l~r~~~~l~~~~~~~l~iGq~g~-------~~~~~F~G~LQ~-L~i~~dp 225 (1022) +..++|+||.....+.... +. . ....||||.... .....|+|=|++ |+|-..+ T Consensus 97 ~~~~~L~VD~~~~~~~~~~--~g-~---~~~~lylGG~p~~~~~~~~~~~~~F~GCi~~~~~in~~~ 157 (170) T 1d2s_A 97 GDSVLLEVDGEEVLRLRQV--SG-H---PIMRIALGGLLFPASNLRLPLVPALDGCLRRDSWLDKQA 157 (170) T ss_dssp TTEEEEEETTEEEEEETTC--CC-C---CEEEEEESSCSSCGGGSSSCCCCCCCEEEEEEEESCGGG T ss_pred CCEEEEEECCeeeeeeccC--CC-C---cCCCEEECCccccccccccCCCCCeeEecccceecCCee Confidence 9999999999876542111 11 1 246789987521 112469999999 7765443No 25>2jd4_A Laminin subunit alpha-1; basement membrane protein, metal binding protein; 1.9A {Mus musculus} SCOP: b.29.1.0 Probab=98.26 E-value=1.2e-05 Score=92.23 Aligned_cols=125 Identities=15% Similarity=0.291 Sum_probs=85.1 Q ss_pred ceEEEEEEeecCCCCceEEEEEcCCCCeEEEEEEEcccccCceeEEEEEeeccCCcceeEeee----ecccCCCCeeEEE Q FBpp0308936 87 EFAILITFRQSSLKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLASF----GVAHVPDKWNSIA 162 (1022) Q Consensus 87 eFSilaT~R~~~~~~g~LfsV~~~~~~~~qlgl~l~~~~~~~~~i~L~Y~~~~~~~~~~~~sF----~v~ladg~WHrla 162 (1022) +|+|.+.||.. ...+.||.+.+. ...+|.|.|... .|.|.|....+. ....+ ...+.||+||+|. T Consensus 221 ~~~isl~frT~-~~~GlLl~~~~~--~~d~l~l~L~~G-----~l~~~~~~g~g~---~~~~~~~~~~~~l~DG~WH~V~ 289 (383) T 2jd4_A 221 DLQITLEFRTT-SKNGVLLGISSA--KVDAIGLEIVDG-----KVLFHVNNGAGR---ITATYQPRAARALCDGKWHTLQ 289 (383) T ss_dssp CEEEEEEEEES-CSCEEEEEEECS--SSCEEEEEEETT-----EEEEEEESSSCE---EEEEECCSSTTGGGSSSCEEEE T ss_pred ceEEEEEEEeC-CCCEEEEEecCC--CCCEEEEEEECC-----EEEEEEECCCCc---EEEEEecCCCccccCCCcEEEE Confidence 88999999965 556799988763 346888888654 477777543321 22233 4578899999999 Q ss_pred EEEeCCeEEEEEcCccceeeeccCCCcceeccCCeeEEEEeccc-------ccCCccccceeeeEEeeC Q FBpp0308936 163 LQVLSDKVSFYYDCELRNTTLVTREPIELVFDSASTLYIGQAGS-------IIGGKFEGYLEKINVYGN 224 (1022) Q Consensus 163 LsV~g~~VtLyVDC~~~~t~~l~r~~~~l~~~~~~~l~iGq~g~-------~~~~~F~G~LQ~L~i~~d 224 (1022) |...+..++|+||+....+...... ...++....||||.... .....|+|-|++|+|.-. T Consensus 290 v~~~~~~~~L~VD~~~~~~~~~~~~--~~~l~~~~~l~iGG~p~~~~~~~~~~~~~F~GCi~~v~in~~ 356 (383) T 2jd4_A 290 AHKSKHRIVLTVDGNSVRAESPHTH--STSADTNDPIYVGGYPAHIKQNSLSSRASFRGCVRNLRLSRG 356 (383) T ss_dssp EEEETTEEEEEETTEEEEEC----C--CCCBCCCEEEEESCCCTTSCCTTCSCCCBCEEEEEEEEEC-- T ss_pred EEEeCCEEEEEECCeeeccccCCcc--cccccCCCCEEEcCccCcccccccccCCCCceEeeeEEECCC Confidence 9999999999999988765322111 11234467899997421 113469999999999654No 26>1f5f_A SHBG, sex hormone-binding globulin; jellyroll, signaling protein; HET: DHT; 1.70A {Homo sapiens} SCOP: b.29.1.4 PDB: 1lhw_A* 1lho_A* 1lhn_A* 1lhv_A* 1lhu_A* Probab=98.26 E-value=1.7e-05 Score=83.29 Aligned_cols=128 Identities=11% Similarity=0.024 Sum_probs=85.5 Q ss_pred ceEEEEEEeecCCCCceEEEEEcCCCCeEEEEEEEcccccCceeEEEEEeeccCCcceeEeeeecccCCCCeeEEEEEEe Q FBpp0308936 87 EFAILITFRQSSLKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLASFGVAHVPDKWNSIALQVL 166 (1022) Q Consensus 87 eFSilaT~R~~~~~~g~LfsV~~~~~~~~qlgl~l~~~~~~~~~i~L~Y~~~~~~~~~~~~sF~v~ladg~WHrlaLsV~ 166 (1022) +|+|.+.||... ..+.||...+. +...+|.|.|..- .|.|.|..... ...+.-...+.||+||+|.|... T Consensus 39 ~~~is~~frT~~-~~GlLl~~~~~-~~~d~l~L~L~~G-----~l~~~~~~g~~---~~~~~s~~~vnDG~WH~V~l~~~ 108 (205) T 1f5f_A 39 KTSSSFEVRTWD-PEGVIFYGDTN-PKDDWFMLGLRDG-----RPEIQLHNHWA---QLTVGAGPRLDDGRWHQVEVKME 108 (205) T ss_dssp CCEEEEEEEESC-SSEEEEEEEEE-TTTEEEEEEEETT-----EEEEEEESSSC---EEEEECSCCCCSSSCEEEEEEEE T ss_pred CcEEEEEEEECC-CCEEEEEeCCC-CCCCEEEEEEeCC-----EEEEEEECCCc---eEEEecCCccCCCCCEEEEEEEe Confidence 788888998765 45788887764 3457888998765 47777764321 12222356788999999999999 Q ss_pred CCeEEEEEcCccceee-eccCCCcceeccCCeeEEEEeccc-------ccCCccccceee-eEEeeCc Q FBpp0308936 167 SDKVSFYYDCELRNTT-LVTREPIELVFDSASTLYIGQAGS-------IIGGKFEGYLEK-INVYGNP 225 (1022) Q Consensus 167 g~~VtLyVDC~~~~t~-~l~r~~~~l~~~~~~~l~iGq~g~-------~~~~~F~G~LQ~-L~i~~dp 225 (1022) +..++|+||.....+. ........ .......||||-... .....|+|=|++ |+|-..+ T Consensus 109 ~~~~~L~VD~~~~~~~~~~~~~~~~-~~~~~~~lyvGG~p~~~~~~~~~~~~~F~GCi~~~v~in~~~ 175 (205) T 1f5f_A 109 GDSVLLEVDGEEVLRLRQVSGPLTS-KRHPIMRIALGGLLFPASNLRLPLVPALDGCLRRDSWLDKQA 175 (205) T ss_dssp TTEEEEEETTEEEEEECSCCCCC-----CCEEEEEESSCSSCGGGSSSCCCCCCCEEEEEEECSCGGG T ss_pred CCEEEEEECCccceeeecccCcccc-CCCcCccEEECCccCcccccccCCCCCccEEecccEEECCeE Confidence 9999999999876542 22211111 112246799987521 013469999999 7776544No 27>2r1d_A Neurexin-1-beta, neurexin I-beta; beta-sandwich, cell adhesion, splicing; 2.60A {Rattus norvegicus} SCOP: b.29.1.4 PDB: 3biw_E* Probab=98.25 E-value=1.2e-05 Score=85.87 Aligned_cols=126 Identities=17% Similarity=0.179 Sum_probs=87.0 Q ss_pred ceEEEEEEeecCCCCceEEEEEcCCCCeEEEEEEEcccccCceeEEEEEeeccCCcceeEeeeecccCCCCeeEEEEEEe Q FBpp0308936 87 EFAILITFRQSSLKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLASFGVAHVPDKWNSIALQVL 166 (1022) Q Consensus 87 eFSilaT~R~~~~~~g~LfsV~~~~~~~~qlgl~l~~~~~~~~~i~L~Y~~~~~~~~~~~~sF~v~ladg~WHrlaLsV~ 166 (1022) .+.|.+.||.. ...+.||.+.+......+|.|+|..- .|.|.|...++.. .+......+.|++||+|.|... T Consensus 64 ~~~isl~FrT~-~~~GlLl~~~~~~~~~dfl~L~L~~G-----~l~~~~~~G~~~~--~l~~~~~~l~DG~WH~V~v~r~ 135 (226) T 2r1d_A 64 ADRLAIGFSTV-QKEAVLVRVDSSSGLGDYLELHIHQG-----KIGVKFNVGTDDI--AIEESNAIINDGKYHVVRFTRS 135 (226) T ss_dssp EEEEEEEEECC-CSSEEEEEEEECTTCCCEEEEEEETT-----EEEEEEESSSCEE--EEECCSSCCCSSSCEEEEEEEE T ss_pred cCEEEEEEEEC-CCCeEEEEecCCCCCCCEEEEEEECC-----EEEEEEECCCCeE--EEecCCcCccCCCcEEEEEEEc Confidence 67888888865 45678888877423457888888654 5778886543211 2212356788999999999999 Q ss_pred CCeEEEEEcCcccee-eeccCCCcceeccCCeeEEEEecccccCCccccceeeeEEeeC Q FBpp0308936 167 SDKVSFYYDCELRNT-TLVTREPIELVFDSASTLYIGQAGSIIGGKFEGYLEKINVYGN 224 (1022) Q Consensus 167 g~~VtLyVDC~~~~t-~~l~r~~~~l~~~~~~~l~iGq~g~~~~~~F~G~LQ~L~i~~d 224 (1022) +..++|+||.....+ ...+..... ++....||||-.. ....|+|-|++|+|-.- T Consensus 136 ~~~~~L~VD~~~~~~~~~~~~~~~~--l~~~~~l~lGG~p--~~~~F~GCi~~v~in~~ 190 (226) T 2r1d_A 136 GGNATLQVDSWPVIERYPAGRQLTI--FNSQATIIIGGKE--QGQPFQGQLSGLYYNGL 190 (226) T ss_dssp TTEEEEEETTSCCEEECCSSCCCCC--BCSEEEEEESSTT--TTCCCCEEEEEEEETTB T ss_pred CCEEEEEECCeeeeeEecCCCcceE--EcCCCCEEEeccc--CCCCCEEEEeeEEECCE Confidence 999999999987433 333322222 3335679999762 23679999999998543No 28>1dyk_A Laminin alpha 2 chain; metal binding protein; 2.0A {Mus musculus} SCOP: b.29.1.4 b.29.1.4 PDB: 1okq_A 1qu0_A Probab=98.14 E-value=2.5e-05 Score=89.86 Aligned_cols=126 Identities=10% Similarity=0.236 Sum_probs=86.4 Q ss_pred ceEEEEEEeecCCCCceEEEEEcCCCCeEEEEEEEcccccCceeEEEEEeeccCCcceeEeee----ecccCCCCeeEEE Q FBpp0308936 87 EFAILITFRQSSLKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLASF----GVAHVPDKWNSIA 162 (1022) Q Consensus 87 eFSilaT~R~~~~~~g~LfsV~~~~~~~~qlgl~l~~~~~~~~~i~L~Y~~~~~~~~~~~~sF----~v~ladg~WHrla 162 (1022) +|+|.+.||... ..+.||.+.+. ...+|.|.|... .|.|.|....+. ....+ ...+.||+||+|. T Consensus 233 ~~~is~~frT~~-~~GlLl~~~~~--~~~~l~l~L~~G-----~l~~~~~~g~g~---~~~~~~~~~~~~l~DG~WH~V~ 301 (394) T 1dyk_A 233 DLLVEFEFRTTR-PTGVLLGVSSQ--KMDGMGIEMIDE-----KLMFHVDNGAGR---FTAIYDAEIPGHMCNGQWHKVT 301 (394) T ss_dssp EEEEEEEEEESC-SCEEEEEEECS--SSCEEEEEEETT-----EEEEEEESSSCC---EEEEECCCSTTSTTSSSCEEEE T ss_pred ceEEEEEEEeCC-CCcEEEEeccC--CCCEEEEEEECC-----EEEEEEECCCCc---eEEEEecCCCCcCcCCCcEEEE Confidence 788999998754 45789888763 346788888754 477777543322 22232 4677899999999 Q ss_pred EEEeCCeEEEEEcCccceeeeccCCCcceeccCCeeEEEEecccc-------cCCccccceeeeEEeeCc Q FBpp0308936 163 LQVLSDKVSFYYDCELRNTTLVTREPIELVFDSASTLYIGQAGSI-------IGGKFEGYLEKINVYGNP 225 (1022) Q Consensus 163 LsV~g~~VtLyVDC~~~~t~~l~r~~~~l~~~~~~~l~iGq~g~~-------~~~~F~G~LQ~L~i~~dp 225 (1022) |...+..++|+||+.......... ....++....||||..... ....|+|-|++|+|--.+ T Consensus 302 v~~~~~~~~L~VD~~~~~~~~~~~--~~~~~~~~~~l~iGG~p~~~~~~~~~~~~~F~GCi~~v~in~~~ 369 (394) T 1dyk_A 302 AKKIKNRLELVVDGNQVDAQSPNS--ASTSADTNDPVFVGGFPGGLNQFGLTTNIRFRGCIRSLKLTKGT 369 (394) T ss_dssp EEEETTEEEEEETTEEEEEECCCT--TCCCBCCCBCCEESCCCTTCCCTTCSCCCCCEEEEEEEEEECTT T ss_pred EEEeCCEEEEEECCcccccccCCc--cccccccCCCEEECCCCCcccccCccccCCccccccEEEECCcc Confidence 999999999999998765532211 1222344667899875211 124699999999996543No 29>4qvs_A S-layer domain-containing protein; human microbiome, midwest center for structural genomics, MC biology; 2.10A {Ruminiclostridium thermocellum atcc 27ORGANISM_TAXID} Probab=98.12 E-value=5.3e-06 Score=87.13 Aligned_cols=164 Identities=15% Similarity=0.204 Sum_probs=97.4 Q ss_pred eEEccCCCCCcceEecCC-CccCCchhhccCCCCcceEEEEEEeecCCCC---ceEEEEEcCCCCeEEEEEEEcccccCc Q FBpp0308936 53 IEFGEAEDGFPAFRFLQT-ADVKSPYRMLLPEKLYEFAILITFRQSSLKG---GYLFSVVNPLDTVVQLGVHLSPVVKNS 128 (1022) Q Consensus 53 V~~v~G~d~~pAy~f~~~-a~l~~pt~~~fP~~~~eFSilaT~R~~~~~~---g~LfsV~~~~~~~~qlgl~l~~~~~~~ 128 (1022) ++.+.|..+ .|+.|... ..+..+.. ++ ....+|+|.++||+..... ..||+.-+ ...++-|..... T Consensus 38 ~~~~~g~~g-~al~f~G~~~~v~~~~~-~~-~~~~~fTi~~Wvk~~~~~~~~~~~i~~~~~---~~~~~~l~~~~~---- 107 (227) T 4qvs_A 38 NGVVPGLNG-NSVSLDGVDDYVALPDG-IA-GTFYNFTIAFWVRLDTIGEQPIFDFFDSGS---NNKYMRLTAESD---- 107 (227) T ss_dssp SCEEECSSS-EEECCCSSSCEEECCTT-SS-TTCSSCCCCCCCCCSSCSSEEEEEEECTTC---SSCEEEEEECTT---- T ss_pred ceeccCCCC-cEEEecCcCCEEEcCcc-cc-cCCCCeEEEEEEEeCCCCCCcceeeEecCC---CCcEEEEEEcCC---- Confidence 455555443 68888754 34555432 11 1122999999999987664 34554322 223443433322 Q ss_pred eeEEEEEeeccCCcceeEeeeecccCCCCeeEEEEEEeCCeEEEEEcCccceeeeccC-CCcceeccCCeeEEEEecccc Q FBpp0308936 129 YNVSLVYTQADQNIGRKLASFGVAHVPDKWNSIALQVLSDKVSFYYDCELRNTTLVTR-EPIELVFDSASTLYIGQAGSI 207 (1022) Q Consensus 129 ~~i~L~Y~~~~~~~~~~~~sF~v~ladg~WHrlaLsV~g~~VtLyVDC~~~~t~~l~r-~~~~l~~~~~~~l~iGq~g~~ 207 (1022) .++.|.+...+... ...+.-...+.+++||||++...+..++||||.+++.+..... .+..+ +.....++||..... T Consensus 108 g~l~~~~~~~~~~~-~~~~~~~~~~~~~~W~hva~t~d~~~~~lYvnG~~~~~~~~~~~~~~~~-~~~~~~~~iG~~~~~ 185 (227) T 4qvs_A 108 GKIKFAMTQSGYYG-EKTITSGSALTEGVWKHVAVTLSGDTGTLYINGENVGENNTLSLRPLTF-LGETSKGYIGKSHQT 185 (227) T ss_dssp SCEEEEEESSCGGG-CEEEECCCCCCTTCCCCEEEEEETTEEEEEETTEEEEEETTCCC-CCSS-SGGGCCCCSSCCCCC T ss_pred CcEEEEEeCCCCCc-ceEEecCCcccCCcEEEEEEEEeCCeEEEEECCEEeeeccCCCCCcccc-cCCCcceeecCCcCC Confidence 23556554332211 1222224566799999999999999999999999988754321 12111 122356788876321 Q ss_pred c-------CCccccceeeeEEeeCcccc Q FBpp0308936 208 I-------GGKFEGYLEKINVYGNPDAI 228 (1022) Q Consensus 208 ~-------~~~F~G~LQ~L~i~~dp~~a 228 (1022) . ...|.|.|.+|+|+...... T Consensus 186 ~~~~~~~~~~~f~G~idevri~~~aLs~ 213 (227) T 4qvs_A 186 DSSEDPYYNSYLHGMIDDFRIFDRALSA 213 (227) T ss_dssp SCTTCSSTTCCCCSCCCCCCCCSSCCCH T ss_pred CccCCcccccccCcEeeEEEEEcccCCH Confidence 1 13799999999999876543No 30>2r1b_A Neurexin-1-beta, neurexin I-beta; beta-sandwich, cell adhesion, splicing; 1.72A {Rattus norvegicus} SCOP: b.29.1.4 PDB: 3mw2_A* 3b3q_E* 3mw3_A* Probab=98.08 E-value=5.6e-05 Score=80.30 Aligned_cols=127 Identities=16% Similarity=0.177 Sum_probs=83.2 Q ss_pred ceEEEEEEeecCCCCceEEEEEcCCCCeEEEEEEEcccccCceeEEEEEeeccCCcceeEeee-ecccCCCCeeEEEEEE Q FBpp0308936 87 EFAILITFRQSSLKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLASF-GVAHVPDKWNSIALQV 165 (1022) Q Consensus 87 eFSilaT~R~~~~~~g~LfsV~~~~~~~~qlgl~l~~~~~~~~~i~L~Y~~~~~~~~~~~~sF-~v~ladg~WHrlaLsV 165 (1022) .++|.+.||... ..+.||.+.+......+|.|+|..- .|.|.|....+. ..... ...+.|++||+|.|.. T Consensus 36 ~~~isl~frT~~-~~GlLl~~~~~~~~~d~l~l~L~~G-----~l~~~~~~G~~~---~~~~~~~~~l~DG~WH~V~v~r 106 (220) T 2r1b_A 36 ADRLAIGFSTVQ-KEAVLVRVDSSSGLGDYLELHIHQG-----KIGVKFNVGTDD---IAIEESNAIINDGKYHVVRFTR 106 (220) T ss_dssp EEEEEEEEECCC-SSEEEEEEEESTTCCCEEEEEEETT-----EEEEEEESSSSC---EEEECTTCCCCSSSCEEEEEEE T ss_pred CCEEEEEEEECC-CCeEEEEEcCCCCCCCEEEEEEeCC-----EEEEEEECCCCc---EEEecCCcCcCCCCCEEEEEEE Confidence 678888888764 5578888776422457888888654 477888654332 22233 5678899999999999 Q ss_pred eCCeEEEEEcCccceee-ec-cCCCcce---------------------------eccCCeeEEEEecccccCCccccce Q FBpp0308936 166 LSDKVSFYYDCELRNTT-LV-TREPIEL---------------------------VFDSASTLYIGQAGSIIGGKFEGYL 216 (1022) Q Consensus 166 ~g~~VtLyVDC~~~~t~-~l-~r~~~~l---------------------------~~~~~~~l~iGq~g~~~~~~F~G~L 216 (1022) .+..++|.||.....+. .. ......+ .+.....||||-.. ....|+|=| T Consensus 107 ~~~~~~L~VD~~~~~~~~~~g~~~~~~l~~~~~~~~~~~g~~~~~~~~d~~~~~~~~n~~~~l~iGG~p--~~~~F~GCi 184 (220) T 2r1b_A 107 SGGNATLQVDSWPVIERYPAGNNDNERLAIARQRIPYRLGRVVDEWLLDKGRQLTIFNSQATIIIGGKE--QGQPFQGQL 184 (220) T ss_dssp ETTEEEEEETTSCCEEECC-----------------CHHHHHHHHHHHHHHHGGGSBCCEEEEEESSTT--TTCCCCEEE T ss_pred eCCEEEEEECCCcceeeccCCCCccceeeccccccceeecccccccccccccceeEecCcCcEEECCcc--CCCCCeEEE Confidence 99999999998764332 11 0000000 11222679998752 245699999 Q ss_pred eeeEEeeC Q FBpp0308936 217 EKINVYGN 224 (1022) Q Consensus 217 Q~L~i~~d 224 (1022) ++|+|--- T Consensus 185 ~~v~in~~ 192 (220) T 2r1b_A 185 SGLYYNGL 192 (220) T ss_dssp EEEEETTB T ss_pred CcEEECCE Confidence 99998543No 31>1h30_A GAS6, growth-arrest-specific protein; laminin G-domain protein, vitamin K-dependent protein, AXL/SKY/MER ligand, laminin G- like domain; 2.2A {Homo sapiens} SCOP: b.29.1.4 b.29.1.4 PDB: 2c5d_A* 4ra0_A* Probab=97.81 E-value=0.00034 Score=81.28 Aligned_cols=127 Identities=13% Similarity=0.149 Sum_probs=86.0 Q ss_pred ceEEEEEEeecCCCCceEEEEEcCCCCeEEEEEEEcccccCceeEEEEEeeccCCcceeEeeeecccCCCCeeEEEEEEe Q FBpp0308936 87 EFAILITFRQSSLKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLASFGVAHVPDKWNSIALQVL 166 (1022) Q Consensus 87 eFSilaT~R~~~~~~g~LfsV~~~~~~~~qlgl~l~~~~~~~~~i~L~Y~~~~~~~~~~~~sF~v~ladg~WHrlaLsV~ 166 (1022) .|+|.+.||... ..+.||-..+. +...+|.|+|..- .|.|.|...++. .+..-...+.|++||+|.|... T Consensus 62 ~~~isl~frT~~-~~GlLl~~~~~-~~~d~~~L~L~~G-----~l~~~~~~g~~~---~~~~~~~~lnDg~WH~V~v~~~ 131 (422) T 1h30_A 62 RLVAEFDFRTFD-PEGILLFAGGH-QDSTWIVLALRAG-----RLELQLRYNGVG---RVTSSGPVINHGMWQTISVEEL 131 (422) T ss_dssp CCEEEEEEEECC-SSEEEEEEESC-TTSEEEEEEEETT-----EEEEEEEETTEE---EEEEEEEECCSSCCEEEEEEEC T ss_pred cEEEEEEEEeCC-CCeEEEEeCCC-CCCCEEEEEEECC-----EEEEEEECCCCc---eEEeCCceecCCCCEEEEEEEc Confidence 788888898765 55788888775 4457999999765 477777654321 2222356788999999999999 Q ss_pred CCeEEEEEcCccceeeeccCCCcceecc-CCeeEEEEecccc-------cCCccccceeeeEEee Q FBpp0308936 167 SDKVSFYYDCELRNTTLVTREPIELVFD-SASTLYIGQAGSI-------IGGKFEGYLEKINVYG 223 (1022) Q Consensus 167 g~~VtLyVDC~~~~t~~l~r~~~~l~~~-~~~~l~iGq~g~~-------~~~~F~G~LQ~L~i~~ 223 (1022) +..++|+||...+.+...+.....+... -...||||-.... ....|.|=|++|+|+- T Consensus 132 ~~~~~l~vD~~~~~~~~~~g~~~~l~~~~~~~~lyvGG~p~~~~~~~~~~~~~F~GCi~~l~~~n 196 (422) T 1h30_A 132 ARNLVIKVNRDAVMKIAVAGDLFQPERGLYHLNLTVGGIPFHEKDLVQPINPRLDGCMRSWNWLN 196 (422) T ss_dssp SSEEEEEETTEEEEEEECCSCSSEEETTEEECEEEESSCSSCGGGSSSCCCCCCCEEEEEEEEC- T ss_pred CCEEEEEECCcceEeeecCCcccccccCcccceEEEecccCcccccccccCCCCCEEeeeeEEcC Confidence 9999999998765443333333233210 1357999865211 1246999999999633No 32>2jd4_A Laminin subunit alpha-1; basement membrane protein, metal binding protein; 1.9A {Mus musculus} SCOP: b.29.1.0 Probab=97.80 E-value=0.0004 Score=79.47 Aligned_cols=125 Identities=16% Similarity=0.273 Sum_probs=84.1 Q ss_pred ceEEEEEEeecCCCCceEEEEEcCCCCeEEEEEEEcccccCceeEEEEEeeccCCcceeEeeeecccCCCCeeEEEEEEe Q FBpp0308936 87 EFAILITFRQSSLKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLASFGVAHVPDKWNSIALQVL 166 (1022) Q Consensus 87 eFSilaT~R~~~~~~g~LfsV~~~~~~~~qlgl~l~~~~~~~~~i~L~Y~~~~~~~~~~~~sF~v~ladg~WHrlaLsV~ 166 (1022) +|+|.+.||... ..+.||-..+. +...+|.|+|..- .|.|.|...++. ..+.....+.|++||+|.|... T Consensus 44 ~~~is~~frT~~-~~GlLl~~~~~-~~~d~~~l~L~~G-----~l~~~~~~g~~~---~~~~~~~~v~Dg~WH~V~v~r~ 113 (383) T 2jd4_A 44 RLQVQLSIRTFA-SSGLIYYVAHQ-NQMDYATLQLQEG-----RLHFMFDLGKGR---TKVSHPALLSDGKWHTVKTEYI 113 (383) T ss_dssp EEEEEEEEEECC-SCEEEEEEECT-TSSSEEEEEEETT-----EEEEEEECSSCE---EEEECCCCCTTSSCEEEEEEEE T ss_pred ceEEEEEEEeCC-CCeEEEEeCCC-CCCcEEEEEEECC-----EEEEEEECCCCe---EEEeCCccccCCCCEEEEEEEE Confidence 889999999755 45688777653 3456888888765 477777544321 2223356778999999999999 Q ss_pred CCeEEEEEcCccceeeeccCCCcceeccCCeeEEEEecccc--------cCCccccceeeeEEee Q FBpp0308936 167 SDKVSFYYDCELRNTTLVTREPIELVFDSASTLYIGQAGSI--------IGGKFEGYLEKINVYG 223 (1022) Q Consensus 167 g~~VtLyVDC~~~~t~~l~r~~~~l~~~~~~~l~iGq~g~~--------~~~~F~G~LQ~L~i~~ 223 (1022) +..++|+||-........+.....+ +....||||-.... ....|.|-|++|+|.. T Consensus 114 ~~~~~L~vD~~~~~~~~~~~~~~~l--~~~~~l~iGG~p~~~~~~~~~~~~~~F~GCi~~l~in~ 176 (383) T 2jd4_A 114 KRKAFMTVDGQESPSVTVVGKATTL--DVERKLYLGGLPSHYRARNIGTITHSIPACIGEIMVNG 176 (383) T ss_dssp TTEEEEEETTEECCCEECCSSCCCC--CCCSEEEESSCCTTCCCCSSCSCCSBCCEEEEEEEETT T ss_pred CCEEEEEEeCCccceeecCCCCcee--cCCCCEEEeCcCccccccccccccCCeeeEeeeEEECC Confidence 9999999997655443332222223 23467999854210 1246999999999854No 33>1a8d_A Tetanus neurotoxin; clostridial, ganglioside binding region; 1.57A {Clostridium tetani} SCOP: b.29.1.6 b.42.4.2 PDB: 1af9_A 1fv3_A* 1fv2_A* 3hmy_A* 3hn1_A* 1d0h_A* 1dfq_A* 1dll_A* 1yxw_A* 1yyn_A* 1diw_A* Probab=97.73 E-value=0.00092 Score=78.45 Aligned_cols=165 Identities=10% Similarity=0.160 Sum_probs=95.9 Q ss_pred CceEEccCCCCCcceEecCCCc----cCCchhhccCCCCc-ceEEEEEEeecCCC-C------ceEEEEEcCCC-----C Q FBpp0308936 51 AGIEFGEAEDGFPAFRFLQTAD----VKSPYRMLLPEKLY-EFAILITFRQSSLK-G------GYLFSVVNPLD-----T 113 (1022) Q Consensus 51 ~GV~~v~G~d~~pAy~f~~~a~----l~~pt~~~fP~~~~-eFSilaT~R~~~~~-~------g~LfsV~~~~~-----~ 113 (1022) .+++++.|.. ..|+.|..... +..+.. ++...+. +|||.+|+|+.... . .-+++|.+..+ . T Consensus 47 G~vs~v~G~~-GkAl~fdG~~~S~~~V~lp~~-ll~~~~~~sFTISfWVK~~~~~t~~~~~y~~g~~~Ii~~~~~~w~~~ 124 (452) T 1a8d_A 47 PDAQLVPGIN-GKAIHLVNNESSEVIVHKAMD-IEYNDMFNNFTVSFWLRVPKVSASHLEQYGTNEYSIISSMKKHSLSI 124 (452) T ss_dssp TTCEEEECSS-SEEEEEESSTTCCEEEECCGG-GTTTTTTSCEEEEEEEECCCCCHHHHHHHTTCEEEEEECCEECGGGC T ss_pred CCceecCCcc-cceEEEcCCCCceEEEecCch-hcccCCCCCEEEEEEEeccccCcccccccccCceEEEeccCcccccC Confidence 4577887755 47899985532 444432 3334455 99999999997653 1 12344443211 1 Q ss_pred eEEEEEEEcccccCceeEEEEEeeccCCcceeEeee-----ecc-cCCCCeeEEEEEEe-CCeEEEEEcCccceeeeccC Q FBpp0308936 114 VVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLASF-----GVA-HVPDKWNSIALQVL-SDKVSFYYDCELRNTTLVTR 186 (1022) Q Consensus 114 ~~qlgl~l~~~~~~~~~i~L~Y~~~~~~~~~~~~sF-----~v~-ladg~WHrlaLsV~-g~~VtLyVDC~~~~t~~l~r 186 (1022) ...+.|.+... .+.|.+....+.. ....| .++ +.+++||||++.+. ...++||||-+++.+..+.. T Consensus 125 ~~G~~i~l~~g-----~l~f~~~~~~G~~--~~i~~~~~~~~i~~v~~g~W~HVAvT~D~~~~~~lYVNG~lv~~~~~~~ 197 (452) T 1a8d_A 125 GSGWSVSLKGN-----NLIWTLKDSAGEV--RQITFRDLPDKFNAYLANKWVFITITNDRLSSANLYINGVLMGSAEITG 197 (452) T ss_dssp EEEEEEEEETT-----EEEEEEECTTSCE--EEEEEECCSBTTSCSSSSSCEEEEEEECTTSEEEEEETTEEEEEEECTT T ss_pred CCCcEEEEcCC-----eEEEEEEeCCCCc--ceeEeeccccccCcCCCCceEEEEEEEeCCCCEEEeECCEEeeeecccc Confidence 34455555433 3455444322221 21212 222 23799999999999 55779999999988765432 Q ss_pred CCcceeccCCeeEEEEecccccCCccccceeeeEEeeCcccc Q FBpp0308936 187 EPIELVFDSASTLYIGQAGSIIGGKFEGYLEKINVYGNPDAI 228 (1022) Q Consensus 187 ~~~~l~~~~~~~l~iGq~g~~~~~~F~G~LQ~L~i~~dp~~a 228 (1022) . ..+ .....+.|+.... ....|.|.|.+|||+..+..+ T Consensus 198 ~-~~i--~~~~~~~lgiG~~-~d~~f~G~IDEvRIynrALS~ 235 (452) T 1a8d_A 198 L-GAI--REDNNITLKLDRC-NNNNQYVSIDKFRIFCKALNP 235 (452) T ss_dssp C-CCC--CCCSEEEEEEESC-CCTTCEEEEEEEEEESSCCCH T ss_pred c-ccc--ccCCeEEEEEccC-CCCCCcEEEEEEEEECCcCCH Confidence 1 111 2233444544211 234699999999999987444No 34>4dqa_A Uncharacterized protein; two domains structure, DUF 1735, laminin_G_3 concanavalin A- lectin/glucanases superfamily domain; HET: MSE; 1.50A {Bacteroides ovatus} Probab=97.69 E-value=0.00024 Score=80.97 Aligned_cols=150 Identities=11% Similarity=0.105 Sum_probs=90.3 Q ss_pred CcceEecCCCccCCchhhccCCCCcceEEEEEEeecCCC-CceEEEEEcCCCCeEEEEEEEcccccCc-eeEEEEEeecc Q FBpp0308936 62 FPAFRFLQTADVKSPYRMLLPEKLYEFAILITFRQSSLK-GGYLFSVVNPLDTVVQLGVHLSPVVKNS-YNVSLVYTQAD 139 (1022) Q Consensus 62 ~pAy~f~~~a~l~~pt~~~fP~~~~eFSilaT~R~~~~~-~g~LfsV~~~~~~~~qlgl~l~~~~~~~-~~i~L~Y~~~~ 139 (1022) ..|++|.. ..+..+.... ....+|+|.+|+|+.... ...||+. ++ .|.|++....... ..-.|.+... T Consensus 140 ~~al~f~G-~yi~v~~~~~--~~~~~fTi~~Wvk~~~~~~~~~i~g~----~g--~~~l~~~~~~~gi~~~~~l~~~g~- 209 (355) T 4dqa_A 140 TKAGNFSN-HYISVKFPVG--TFFSSFTYEALINVDYFLDNNTIMGT----EG--VMILRIGDAGGGITPKDYLEVAGG- 209 (355) T ss_dssp CEEEEEES-CCEEECCCTT--CCBSSEEEEEEEEESCCCSSEEEEEE----TT--TEEEEEEEGGGTSEEEEEEEEEES- T ss_pred ccccccCC-ceEEecCCCC--CCccCEEEEEEEEccccCCcceEEcC----CC--cEEEEecCCCcCcCcCCEEEEcCC- Confidence 45667764 4444332211 111299999999997654 3456542 22 2345554321100 1123444221 Q ss_pred CCcceeEeeeecccCCCCeeEEEEEEe--CCeEEEEEcCccceeeeccCCCcceeccCCeeEEEEecccc--cCCccccc Q FBpp0308936 140 QNIGRKLASFGVAHVPDKWNSIALQVL--SDKVSFYYDCELRNTTLVTREPIELVFDSASTLYIGQAGSI--IGGKFEGY 215 (1022) Q Consensus 140 ~~~~~~~~sF~v~ladg~WHrlaLsV~--g~~VtLyVDC~~~~t~~l~r~~~~l~~~~~~~l~iGq~g~~--~~~~F~G~ 215 (1022) . .. .-...+.+++||||++... +..++||||.+++.+....... +.+.....++||+.... ....|.|. T Consensus 210 --~--~~-~s~~~~~~~~W~Hva~t~d~~~~~~~lYvnG~~~~~~~~~~~~--~~~~~~~~l~IG~~~~~~~~~~~f~G~ 282 (355) T 4dqa_A 210 --Q--NY-RVTKPLLTNRWYHVALTYDQPTGKTGIYVNGEKWAGSDWGIDG--FDPNSDMGFYIGRIYGFKWGERPFHGK 282 (355) T ss_dssp --S--CE-ECSSCCCSSCEEEEEEEEETTTTEEEEEETTEEEEEEECCCCC--BCTTSTTCEEESCCTTCTTCCCCCEEE T ss_pred --C--cc-ccCCccCCCCEEEEEEEEECCCCEEEEEECCEEEeEEEcCCCc--cccCCCceEEEcCCCCCCCCCccceEE Confidence 1 11 1134667999999999999 8899999999998876553322 22223467999986321 23579999 Q ss_pred eeeeEEeeCcccc Q FBpp0308936 216 LEKINVYGNPDAI 228 (1022) Q Consensus 216 LQ~L~i~~dp~~a 228 (1022) |.+|||+...... T Consensus 283 idevri~~~aLs~ 295 (355) T 4dqa_A 283 MSEVRVWSVARTE 295 (355) T ss_dssp EEEEEEESSCCCH T ss_pred EEEEEEECCCCCH Confidence 9999999987544No 35>1dyk_A Laminin alpha 2 chain; metal binding protein; 2.0A {Mus musculus} SCOP: b.29.1.4 b.29.1.4 PDB: 1okq_A 1qu0_A Probab=97.64 E-value=0.00072 Score=77.70 Aligned_cols=126 Identities=15% Similarity=0.231 Sum_probs=84.4 Q ss_pred ceEEEEEEeecCCCCceEEEEEcCCCCeEEEEEEEcccccCceeEEEEEeeccCCcceeEeeeecccCCCCeeEEEEEEe Q FBpp0308936 87 EFAILITFRQSSLKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLASFGVAHVPDKWNSIALQVL 166 (1022) Q Consensus 87 eFSilaT~R~~~~~~g~LfsV~~~~~~~~qlgl~l~~~~~~~~~i~L~Y~~~~~~~~~~~~sF~v~ladg~WHrlaLsV~ 166 (1022) +|+|.+.||... ..+.||-..+. +...+|.|+|..- .|.|.|....+. ..+.....+.|++||+|.|... T Consensus 58 ~~~is~~frT~~-~~GlLl~~~~~-~~~d~~~l~l~~G-----~l~~~~~~g~g~---~~~~~~~~~nDg~WH~V~v~~~ 127 (394) T 1dyk_A 58 RLTIELEVRTEA-ESGLLFYMARI-NHADFATVQLRNG-----FPYFSYDLGSGD---TSTMIPTKINDGQWHKIKIVRV 127 (394) T ss_dssp EEEEEEEEEECC-SCEEEEEEECT-TSSSEEEEEEETT-----EEEEEEESSSCE---EEEECCSCCCSSSCEEEEEEEE T ss_pred ceEEEEEEEECC-CCeEEEEeCCC-CCCCeEEEEEECC-----EEEEEEECCCCc---EEEEecceecCCCeEEEEEEEe Confidence 788889999754 45688877653 3456888888765 477777643321 2233356778999999999999 Q ss_pred CCeEEEEEcCccceeeeccCCCcceeccCCeeEEEEecccc--------cCCccccceeeeEEeeCc Q FBpp0308936 167 SDKVSFYYDCELRNTTLVTREPIELVFDSASTLYIGQAGSI--------IGGKFEGYLEKINVYGNP 225 (1022) Q Consensus 167 g~~VtLyVDC~~~~t~~l~r~~~~l~~~~~~~l~iGq~g~~--------~~~~F~G~LQ~L~i~~dp 225 (1022) +..++|+||-....... +..... ++....||||-.... ....|.|-|++|+|...+ T Consensus 128 ~~~~~L~vD~~~~~~~~-~~~~~~--l~~~~~l~lGG~p~~~~~~~~~~~~~~F~GCi~~l~in~~~ 191 (394) T 1dyk_A 128 KQEGILYVDDASSQTIS-PKKADI--LDVVGILYVGGLPINYTTRRIGPVTYSLDGCVRNLHMEQAP 191 (394) T ss_dssp TTEEEEEETTEEEEEEC-STTCCC--CCCCSEEEESSCCTTCCCCSSCSCCSBCSEEEEEEEESSSC T ss_pred CCEEEEEECCcccccCc-CCCCcc--ccCCCceEEcccCCcccccccccCCCCceEEeeEEEECCEE Confidence 99999999977544332 111112 233567999864211 113599999999986543No 36>2vu9_A Botulinum neurotoxin A heavy chain; hydrolase, metalloprotease, ganglioside, metal-B toxin, protease, membrane, receptor, secreted; HET: BGC GAL SIA NGA; 1.6A {Clostridium botulinum} SCOP: b.29.1.6 b.42.4.2 PDB: 2vua_A 4jra_A 3fuo_A 4iqp_A Probab=97.59 E-value=0.0017 Score=74.19 Aligned_cols=169 Identities=9% Similarity=0.116 Sum_probs=102.9 Q ss_pred CCceEEccCCCCCcceEecCCC---ccCCchhhccCCCCc-ceEEEEEEeecCCCCce----EEEEEcCCCCeEEEEEEE Q FBpp0308936 50 FAGIEFGEAEDGFPAFRFLQTA---DVKSPYRMLLPEKLY-EFAILITFRQSSLKGGY----LFSVVNPLDTVVQLGVHL 121 (1022) Q Consensus 50 ~~GV~~v~G~d~~pAy~f~~~a---~l~~pt~~~fP~~~~-eFSilaT~R~~~~~~g~----LfsV~~~~~~~~qlgl~l 121 (1022) ...|+++.| . .-||.+...+ ..-.-...++-+.++ +|||.+|+|..+.+..+ .++|.+......-..|.| T Consensus 48 ~G~v~~~~G-~-g~A~~L~~s~~s~~~v~~~ndii~n~~~nnFSIsFWvr~~k~~~~~~~~~e~tIIn~k~~NsGW~Isl 125 (444) T 2vu9_A 48 GSKVNFDPI-D-KNQIQLFNLESSKIEVILKNAIVYNSMYENFSTSFWIRIPKYFNSISLNNEYTIINCMENNSGWKVSL 125 (444) T ss_dssp CTTEEECSS-C-TTCEEEESSTTCCEEEECCGGGSCEESSCCEEEEEEEECCCCCSGGGTTCCEEEEEEEETTEEEEEEE T ss_pred CCceEEEec-C-CcEEEeccCCCceEEEecCchhhhccccCceEEEEEEECCCCCcccccCCceEeEeeccCCCCeEEEE Confidence 456889988 4 4588886444 222234445556677 99999999997766632 344443322223344555 Q ss_pred cccccCceeEEEEEeeccCCcceeEeeee----cccC--CCCeeEEEEEEe-CCeEEEEEcCccceeeeccCCCcceecc Q FBpp0308936 122 SPVVKNSYNVSLVYTQADQNIGRKLASFG----VAHV--PDKWNSIALQVL-SDKVSFYYDCELRNTTLVTREPIELVFD 194 (1022) Q Consensus 122 ~~~~~~~~~i~L~Y~~~~~~~~~~~~sF~----v~la--dg~WHrlaLsV~-g~~VtLyVDC~~~~t~~l~r~~~~l~~~ 194 (1022) ... .+.+-.. +.....+...|. ..+. .++||+|+|+|. -..+++|+|-+++.+..+.-. -.+.+ T Consensus 126 ~~n-----~liwtl~--dsngn~k~i~f~y~~~~~I~dyinkW~hVtIt~Drlg~a~IYING~lv~~k~I~~l-g~I~~- 196 (444) T 2vu9_A 126 NYG-----EIIWTLQ--DTQEIKQRVVFKYSQMINISDYINRWIFVTITNNRLNNSKIYINGRLIDQKPISNL-GNIHA- 196 (444) T ss_dssp ETT-----EEEEEEE--CTTSCEEEEEEECCSBSSSCSSTTSCEEEEEEECTTSEEEEEETTEEEEEEECTTC-CCEEC- T ss_pred CCC-----eEEEEEE--ecCCceeeEEEecccccccccccCceEEEEEEECCCCCEEEEECCEEeeecchhhc-cceee- Confidence 543 2333333 322233444553 2222 389999999999 567899999999999877642 23322 Q ss_pred CCeeEEEEecccccCCccccceeeeEEeeCccccccc Q FBpp0308936 195 SASTLYIGQAGSIIGGKFEGYLEKINVYGNPDAINVT 231 (1022) Q Consensus 195 ~~~~l~iGq~g~~~~~~F~G~LQ~L~i~~dp~~a~~~ 231 (1022) +..+-++-.+ .....+++.|.+|+|+..+-...+. T Consensus 197 -sn~i~l~v~~-~~d~~~~~~ID~f~Ifnk~Lt~~EI 231 (444) T 2vu9_A 197 -SNNIMFKLDG-CRDTHRYIWIKYFNLFDKELNEKEI 231 (444) T ss_dssp -CSEEEEEEES-CCCTTCEEEEEEEEEESSCCCHHHH T ss_pred -CCeEEEEecc-cCCCccceeeeeeEEecccCCHHHH Confidence 2333333321 3446789999999999988655443No 37>2jkb_A Sialidase B; intramolecular trans-sialidase, lyase, glycosidase, neuraminidase; HET: SKD; 1.54A {Streptococcus pneumoniae} PDB: 2vw2_A* 2vw1_A* 2vw0_A* 4foq_A 4fov_A* 4fow_A 4foy_A* 4fp2_A* 4fp3_A* 4fpc_A* 4fpe_A* 4fpf_A* 4fpg_A* 4fph_A* 4fpj_A* 4fpk_A* 4fpl_A* 4fpo_B* 4fpy_A* 4fq4_A* Probab=97.56 E-value=0.00068 Score=83.98 Aligned_cols=164 Identities=10% Similarity=0.066 Sum_probs=101.0 Q ss_pred CcceEecCCCccCCchhhccCCCC--cceEEEEEEeecC-CCCceEEEEEcCCC--CeEEEEEEEcccccCceeEEEEEe Q FBpp0308936 62 FPAFRFLQTADVKSPYRMLLPEKL--YEFAILITFRQSS-LKGGYLFSVVNPLD--TVVQLGVHLSPVVKNSYNVSLVYT 136 (1022) Q Consensus 62 ~pAy~f~~~a~l~~pt~~~fP~~~--~eFSilaT~R~~~-~~~g~LfsV~~~~~--~~~qlgl~l~~~~~~~~~i~L~Y~ 136 (1022) ..|+.|.... +..+... ...+ .+|||.++||+.. .+...||++.+... ...+|.|.+... . ++.|... T Consensus 34 g~a~~fdG~~-v~l~~~~--~~~l~~~~fTv~~Wvk~~~~~~~~~lfs~~~~~~~~~~~~~~l~~~~~-g---~~~~~~~ 106 (686) T 2jkb_A 34 GGSYQLNNKS-IDISSLL--LDKLSGESQTVVMKFKADKPNSLQALFGLSNSKAGFKNNYFSIFMRDS-G---EIGVEIR 106 (686) T ss_dssp EEEEEEESSC-EECHHHH--GGGCCSSCEEEEEEEECSSCCSEEEEEEEECCSTTCTTCEEEEEEETT-S---CEEEEEE T ss_pred cceEEecCce-EECchhc--cccCCCCCeEEEEEEEeCCCCCCCEEEEecCCCCCCccccEEEEEeCC-C---eEEEEEE Confidence 3578886433 4444332 2345 3999999999975 45557999986422 235677888653 1 3666665 Q ss_pred eccCCcceeEeeeeccc-----CCCCeeEEEEEEeCC--eEEEEEcCccceeeeccCCCcceeccCCeeEEEEecccc-- Q FBpp0308936 137 QADQNIGRKLASFGVAH-----VPDKWNSIALQVLSD--KVSFYYDCELRNTTLVTREPIELVFDSASTLYIGQAGSI-- 207 (1022) Q Consensus 137 ~~~~~~~~~~~sF~v~l-----adg~WHrlaLsV~g~--~VtLyVDC~~~~t~~l~r~~~~l~~~~~~~l~iGq~g~~-- 207 (1022) ..+.... ..+.....+ .+++||||++...+. .++||||-+++.+........--.+.....|+||+.... T Consensus 107 ~~~~~~~-~~~~~~~~~~~~~~~~g~W~Hva~t~d~~~g~~~lYvnG~~~~~~~~~~~~~~~~~~~~~~~~IG~~~~~g~ 185 (686) T 2jkb_A 107 DAQKGIN-YLFSRPASLWGKHKGQAVENTLVFVSDSKDKTYTMYVNGIEVFSETVDTFLPISNINGIDKATLGAVNREGK 185 (686) T ss_dssp ETTTTEE-EEEEESSCCCCEETTEECCEEEEEEEETTTTEEEEEETTEEEEEEECSSCCCGGGSTTCCEEEESSEEETTE T ss_pred eCCCcee-EEeeccccccccccCCCCeEEEEEEEECCCCeEEEEECCEEEEeeccccceecccCCCCceEEECCeecCCC Confidence 4432221 111111111 358999999999864 999999999988765532111001223357999984211 Q ss_pred cCCccccceeeeEEeeCcccccccCC Q FBpp0308936 208 IGGKFEGYLEKINVYGNPDAINVTCM 233 (1022) Q Consensus 208 ~~~~F~G~LQ~L~i~~dp~~a~~~C~ 233 (1022) ....|.|.|.+|+|+.......++.. T Consensus 186 ~~~~f~G~Idev~i~~~aLs~~eI~~ 211 (686) T 2jkb_A 186 EHYLAKGSIDEISLFNKAISDQEVST 211 (686) T ss_dssp EESCCEEEEEEEEEESSCCCHHHHHT T ss_pred ccccccceEEEEEEecccCCHHHHHH Confidence 12249999999999988766555443No 38>2wjs_A Laminin subunit alpha-2; integrin, secreted, coiled coil, glycoprotein, laminin EGF-like domain, extracellular matrix, laminin G-like domain; HET: NAG; 2.80A {Mus musculus} Probab=97.55 E-value=0.00062 Score=83.01 Aligned_cols=123 Identities=13% Similarity=0.152 Sum_probs=79.6 Q ss_pred ceEEEEEEeecCCCCceEEEEEcCCCCeEEEEEEEcccccCceeEEEEEeeccCCcceeEe--eeecccCCCCeeEEEEE Q FBpp0308936 87 EFAILITFRQSSLKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLA--SFGVAHVPDKWNSIALQ 164 (1022) Q Consensus 87 eFSilaT~R~~~~~~g~LfsV~~~~~~~~qlgl~l~~~~~~~~~i~L~Y~~~~~~~~~~~~--sF~v~ladg~WHrlaLs 164 (1022) ++.|.+.||.. ...+.||.+.+. ...+|.|.|..- .|.|.|....+.. ..++ .....+.||+||+|.|. T Consensus 408 ~~~i~~~FRT~-~~~GlLl~~~~~--~~~~l~l~L~~G-----~l~~~~~~g~~~~-~~~~~~~~~~~l~DG~WH~V~l~ 478 (608) T 2wjs_A 408 GTEINLSFSTR-NESGIILLGSGG--GQAYYAIFLNKG-----RLEVHLSSGTRTM-RKIVIKPEPNRFHDGREHSVHVE 478 (608) T ss_dssp TEEEEEEEEES-CSSEEEEEEC-----CCEEEEEEETT-----EEEEEEEC----C-EEEEECCCSSCSSSSSCEEEEEE T ss_pred CcEEEEEEEeC-CCceEEEEEcCC--CCCEEEEEEECC-----EEEEEEECCCCce-eeEEEecCCcccCCCCEEEEEEE Confidence 67788888765 456788876553 345788888754 4677775433221 1122 23567889999999999 Q ss_pred EeCCeEEEEEcCccceeeeccCCCcceeccCCeeEEEEecccc-------cCCccccceeeeEEe Q FBpp0308936 165 VLSDKVSFYYDCELRNTTLVTREPIELVFDSASTLYIGQAGSI-------IGGKFEGYLEKINVY 222 (1022) Q Consensus 165 V~g~~VtLyVDC~~~~t~~l~r~~~~l~~~~~~~l~iGq~g~~-------~~~~F~G~LQ~L~i~ 222 (1022) ..+..++|+||.....+..+... ..+.+ ..||||..... ....|+|=|++|+|- T Consensus 479 ~~~~~~~L~VD~~~~~~~~~~~~-~~l~~---~~lylGG~p~~~~~~~~~~~~~F~GCi~~v~in 539 (608) T 2wjs_A 479 RTRGIFTVQIDEDRRHMQNLTEE-QPIEV---KKLFVGGAPPEFQPSPLRNIPAFQGCVWNLVIN 539 (608) T ss_dssp ECSSEEEEEESSSCCEEEECCCC-SCBCC---SCEEESCCCC--------CCCCCCEEEEEEEET T ss_pred EeCCEEEEEECCCcceeeccCCC-ccccc---ccEEEeCCCccccccccccCCCCEEEcCeeEEC Confidence 99999999999987655443321 22222 36899875211 124699999999985No 39>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus} Probab=97.50 E-value=0.001 Score=76.90 Aligned_cols=123 Identities=17% Similarity=0.291 Sum_probs=80.5 Q ss_pred ceEEEEEEeecCCCCceEEEEEcCCCCeEEEEEEEcccccCceeEEEEEeeccCCcceeEee--eecccCCCCeeEEEEE Q FBpp0308936 87 EFAILITFRQSSLKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLAS--FGVAHVPDKWNSIALQ 164 (1022) Q Consensus 87 eFSilaT~R~~~~~~g~LfsV~~~~~~~~qlgl~l~~~~~~~~~i~L~Y~~~~~~~~~~~~s--F~v~ladg~WHrlaLs 164 (1022) +|+|.+.||... ..+.||-... +...+|.|+|..- .|.|.|....+. ..+. -...+.|++||+|.|. T Consensus 27 ~~~is~~frT~~-~~GlLl~~~~--~~~df~~l~L~~G-----~l~~~~~~G~g~---~~~~~~s~~~vnDg~WH~V~v~ 95 (410) T 3asi_A 27 SMHLFFQFKTTS-LDGLILYNSG--DGNDFIVVELVKG-----YLHYVFDLGNGA---NLIKGSSNKPLNDNQWHNVMIS 95 (410) T ss_dssp CEEEEEEEECSC-SCEEEEEEEB--STTCEEEEEEETT-----EEEEEEESSSCE---EEEECCCSSCSCSSSCEEEEEE T ss_pred eEEEEEEEEECC-CCEEEEEeCC--CCCCeEEEEEECC-----EEEEEEECCCCc---EEEEecCCCccCCCCCEEEEEE Confidence 788889998765 4567765443 3457888888765 477777543321 2222 2467889999999999 Q ss_pred EeCCe-EEEEEcCccceeeeccCCCcceeccCCeeEEEEecccc----------cCCccccceeeeEEeeC Q FBpp0308936 165 VLSDK-VSFYYDCELRNTTLVTREPIELVFDSASTLYIGQAGSI----------IGGKFEGYLEKINVYGN 224 (1022) Q Consensus 165 V~g~~-VtLyVDC~~~~t~~l~r~~~~l~~~~~~~l~iGq~g~~----------~~~~F~G~LQ~L~i~~d 224 (1022) ....+ ++|+||........ . ....+ +-...||||-.... ....|+|=|++|+|-.. T Consensus 96 ~~~~~~~~L~vD~~~~~~~~-~-~~~~l--~~~~~lyvGG~p~~~~~~~~~~~~~~~~F~GCi~~v~in~~ 162 (410) T 3asi_A 96 RDTSNLHTVKIDTKITTQIT-A-GARNL--DLKSDLYIGGVAKETYKSLPKLVHAKEGFQGCLASVDLNGR 162 (410) T ss_dssp ECTTCEEEEEETTEEEEEEC-T-TCCCC--CBCSCEEESCCCGGGGGGSCTTCCCSSBCCEEEEEEESSSC T ss_pred EcCCccEEEEECCccceecC-C-Cceee--ccCCCeEEcccccchhcccccccccccCcceEeeeeEECCe Confidence 99876 69999987653321 1 11122 23457999865221 12469999999988543No 40>3vuo_A NTNHA; protection of botulinum neurotoxin, botulinum neurotoxin, to; 3.90A {Clostridium botulinum} Probab=97.44 E-value=0.0021 Score=80.79 Aligned_cols=155 Identities=12% Similarity=0.192 Sum_probs=91.6 Q ss_pred CceEEccCCCCCcceEecCCCc-cCCchhhccCCCCc-ceEEEEEEeec-CCC-CceEEEEEcCCCCeEEEEEEEccccc Q FBpp0308936 51 AGIEFGEAEDGFPAFRFLQTAD-VKSPYRMLLPEKLY-EFAILITFRQS-SLK-GGYLFSVVNPLDTVVQLGVHLSPVVK 126 (1022) Q Consensus 51 ~GV~~v~G~d~~pAy~f~~~a~-l~~pt~~~fP~~~~-eFSilaT~R~~-~~~-~g~LfsV~~~~~~~~qlgl~l~~~~~ 126 (1022) .+++++.|..+ .|+.|..... +..+.. ++..... +|||.+|+|+. ... ...||+-.+. . ..+.|.+... T Consensus 864 G~~sfv~Gv~G-kAL~FDGSd~yV~LPn~-li~nslt~sFTVSFWVKplg~~T~~t~IIsskdn-n--sGw~LsL~~n-- 936 (1196) T 3vuo_A 864 ESVELVYGVNG-ESLYLKSPNETVEFSNN-FFTNGLTNNFTICFWLRFTGKDDDKTRLIGNKVN-N--CGWEIYFEDN-- 936 (1196) T ss_dssp TTCEEEECSSS-EEEEECSSSCCEEEECG-GGGCCSSCCEEEEEEEEECCCCSSCEEEEEEECS-S--CEEEEEEETT-- T ss_pred CCceecCCCcC-ceeEEcCCCceEEeCCc-ccccCCCCcEEEEEEEccCCCCCccceEEEecCC-C--CCcEEEEcCC-- Confidence 35667766543 5888875443 443332 2222334 89999999994 222 1236643321 1 2234555432 Q ss_pred CceeEEEEEeeccCCcceeEeeeecccCCCCeeEEEEEEe--CCeEEEEEcCccceeeeccCCCcceeccCCeeEE-EEe Q FBpp0308936 127 NSYNVSLVYTQADQNIGRKLASFGVAHVPDKWNSIALQVL--SDKVSFYYDCELRNTTLVTREPIELVFDSASTLY-IGQ 203 (1022) Q Consensus 127 ~~~~i~L~Y~~~~~~~~~~~~sF~v~ladg~WHrlaLsV~--g~~VtLyVDC~~~~t~~l~r~~~~l~~~~~~~l~-iGq 203 (1022) .+.+...+..+ ..+...+. .+..++||||++.+. +..++||||-+++.+..+.... .+. .+..+. +|. T Consensus 937 ---tL~Fsi~Ds~G--neqsI~~d-dI~~GkW~HVAVTyDr~G~aLKLYVNGeLVaS~sisgL~-dI~--ssg~IsFIG~ 1007 (1196) T 3vuo_A 937 ---GLVFEIIDSNG--NQESVYLS-NVINNNWYYISISVDRLKDQLLIFINDKNVANVSIEQIL-NIY--STNVISLVNK 1007 (1196) T ss_dssp ---EEEEEEECTTC--CEEEEEEC-SCTTSCCEEEEEEEETTTTEEEEEETTEEEEEEECTTCC-CCC--CCSEEEECCC T ss_pred ---cEEEEEEeCCC--cceeeecC-CCCCCCEEEEEEEEECCCCEEEEeECCEEccccccccCc-ccc--cCCceeEecC Confidence 34555543332 22333443 556899999999999 6678999999999887554321 221 122333 443 Q ss_pred cccccCCccccceeeeEEeeCcccc Q FBpp0308936 204 AGSIIGGKFEGYLEKINVYGNPDAI 228 (1022) Q Consensus 204 ~g~~~~~~F~G~LQ~L~i~~dp~~a 228 (1022) . |.|.|.+|||+..+..+ T Consensus 1008 n-------FnG~IDEVRIYNRALSa 1025 (1196) T 3vuo_A 1008 N-------NSIYVEELSVLDKPVAS 1025 (1196) T ss_dssp S-------SCEEEEEEEEESSCCCH T ss_pred C-------CcEEeeEEEEECCCCCH Confidence 2 89999999999987443No 41>1h30_A GAS6, growth-arrest-specific protein; laminin G-domain protein, vitamin K-dependent protein, AXL/SKY/MER ligand, laminin G- like domain; 2.2A {Homo sapiens} SCOP: b.29.1.4 b.29.1.4 PDB: 2c5d_A* 4ra0_A* Probab=97.41 E-value=0.00078 Score=78.24 Aligned_cols=127 Identities=15% Similarity=0.220 Sum_probs=80.9 Q ss_pred ceEEEEEEeecCCCCceEEEEEcCCCCeEEEEEEEcccc-cCcee---EEEEEeeccCCcceeEeeeecccCCCCeeEEE Q FBpp0308936 87 EFAILITFRQSSLKGGYLFSVVNPLDTVVQLGVHLSPVV-KNSYN---VSLVYTQADQNIGRKLASFGVAHVPDKWNSIA 162 (1022) Q Consensus 87 eFSilaT~R~~~~~~g~LfsV~~~~~~~~qlgl~l~~~~-~~~~~---i~L~Y~~~~~~~~~~~~sF~v~ladg~WHrla 162 (1022) +|+|.+.||.. ...+.||.+.+..+...+|.|.|.... ..+.+ |.|.+.. + ........+.||+||+|. T Consensus 250 ~~~is~~frT~-~~~GlLl~~~~~~~~~d~l~l~L~~g~~~g~l~~~~v~~~~~~--~----~~~~~~~~l~DG~WH~V~ 322 (422) T 1h30_A 250 EVEVVAHIRPA-ADTGVLFALWAPDLRAVPLSVALVDYHSTKKLKKQLVVLAVEH--T----ALALMEIKVCDGQEHVVT 322 (422) T ss_dssp CEEEEEEEEES-SSCEEEEEEEEGGGTEEEEEEEEESCC-----CCCEEEEEETT--E----EEEEEECCTTSSCCEEEE T ss_pred eeEEEEEEEeC-CCCEEEEEEeccCCCcCceEEEEeeccccccccccEEEEEECC--e----EEEEeeeeecCCCEEEEE Confidence 89999999976 455799988864344568888876420 01112 5666632 1 122235778899999999 Q ss_pred EEEeCCeEEEEEcCccceeeeccCCCc-c-----eeccCCeeEEEEecccc------cCCccccceeeeEE Q FBpp0308936 163 LQVLSDKVSFYYDCELRNTTLVTREPI-E-----LVFDSASTLYIGQAGSI------IGGKFEGYLEKINV 221 (1022) Q Consensus 163 LsV~g~~VtLyVDC~~~~t~~l~r~~~-~-----l~~~~~~~l~iGq~g~~------~~~~F~G~LQ~L~i 221 (1022) |...+..++|+||.....+........ . ..+.....||||..... ....|+|=|+ |+| T Consensus 323 l~~~~~~~~L~VD~~~~~~~~~~~~~~~~~~~l~~~l~~~~~lylGG~p~~~~~~~~~~~~F~GCi~-v~i 392 (422) T 1h30_A 323 VSLRDGEATLEVDGTRGQSEVSAAQLQERLAVLERHLRSPVLTFAGGLPDVPVTSAPVTAFYRGCMT-LEV 392 (422) T ss_dssp EEEETTEEEEEETTEECEESSCHHHHHHHHHHHHHHHTSCCEEEESCCCSCCTTSSSCCSBCCEEEE-EEE T ss_pred EEEECCEEEEEeCCccceeeccccchhhhhhhhhHhhccCccEEEcCcCCCcccccccCCCceEEEE-EEE Confidence 999999999999998765532211000 0 12445678999875211 1245899994 765No 42>3v0a_B NTNH; botulinum neurotoxin, toxin, neurotoxin associated protein, progenitor toxin complex, VHH bound interlocked complex; HET: MES; 2.70A {Clostridium botulinum} PDB: 3v0b_B Probab=97.32 E-value=0.003 Score=79.22 Aligned_cols=155 Identities=12% Similarity=0.170 Sum_probs=90.9 Q ss_pred CceEEccCCCCCcceEecCCCc-cCCchhhccCCCCc-ceEEEEEEeec-CCCCc-eEEEEEcCCCCeEEEEEEEccccc Q FBpp0308936 51 AGIEFGEAEDGFPAFRFLQTAD-VKSPYRMLLPEKLY-EFAILITFRQS-SLKGG-YLFSVVNPLDTVVQLGVHLSPVVK 126 (1022) Q Consensus 51 ~GV~~v~G~d~~pAy~f~~~a~-l~~pt~~~fP~~~~-eFSilaT~R~~-~~~~g-~LfsV~~~~~~~~qlgl~l~~~~~ 126 (1022) .+++++.|..+ .|+.|..... +..+...++ +... +|||.+|+|+. ....+ .+|+-.+. ..- +.|.+... T Consensus 867 G~~sfvdGv~G-kAL~FDGSs~yV~LPn~li~-nS~tdsFTVSFWVK~lge~Ta~ttIISs~dn--nsG-WeIsL~nn-- 939 (1196) T 3v0a_B 867 KDIGLVYGINS-DALYLNGSNQSISFSNDFFE-NGLTNSFSIYFWLRNLGKDTIKSKLIGSKED--NCG-WEIYFQDT-- 939 (1196) T ss_dssp TTCEEEECSSS-EEEEECSSSCCEEEECGGGG-CCSSCCEEEEEEEEECCCCCSCEEEEEEEET--TEE-EEEEEETT-- T ss_pred CCceecCCCcC-ceEEEcCCccEEECCCcccc-cCCCCcEEEEEEeccCCccCccceEEecCCC--CCC-ceEEEcCC-- Confidence 35777777554 5888986443 444433322 2234 89999999994 22212 26643332 111 23444432 Q ss_pred CceeEEEEEeeccCCcceeEeeeecccCCCCeeEEEEEEe--CCeEEEEEcCccceeeeccCCCcceeccCCeeEE-EEe Q FBpp0308936 127 NSYNVSLVYTQADQNIGRKLASFGVAHVPDKWNSIALQVL--SDKVSFYYDCELRNTTLVTREPIELVFDSASTLY-IGQ 203 (1022) Q Consensus 127 ~~~~i~L~Y~~~~~~~~~~~~sF~v~ladg~WHrlaLsV~--g~~VtLyVDC~~~~t~~l~r~~~~l~~~~~~~l~-iGq 203 (1022) .+.+...+..+. .....|. ++..++||||++++. +..++||||-+++.+..+.... ++ ..+..+. +|. T Consensus 940 ---~L~Ws~~DsnGn--~ksI~~D-dI~~GkW~HVAITyDrsG~aVKLYINGeLVas~sisgll-dI--~ssg~IsFIG~ 1010 (1196) T 3v0a_B 940 ---GLVFNMIDSNGN--EKNIYLS-DVSNNSWHYITISVDRLKEQLLIFIDDNLVANESIKEIL-NI--YSSNIISLLSE 1010 (1196) T ss_dssp ---EEEEEEECTTCC--EEEEEEC-SCCSSSCEEEEEEEETTTTEEEEEETTEEEEEEECTTCC-CC--CCCSEEEECCT T ss_pred ---ceEEEEEeCCCc--cceeecc-CCCCCCeEEEEEEEeCCCCEEEEeECCEEccccccccCc-cc--ccCCceeEecc Confidence 344444433322 2333443 556899999999998 5667999999998886544321 22 1223333 332 Q ss_pred cccccCCccccceeeeEEeeCcccc Q FBpp0308936 204 AGSIIGGKFEGYLEKINVYGNPDAI 228 (1022) Q Consensus 204 ~g~~~~~~F~G~LQ~L~i~~dp~~a 228 (1022) . |.|.|.+|||+..+..+ T Consensus 1011 n-------FnG~IDEVRIYNRALSa 1028 (1196) T 3v0a_B 1011 N-------NPSYIEGLTILNKPTTS 1028 (1196) T ss_dssp T-------CCEEEEEEEEESSCCCH T ss_pred c-------CCcEeeeEEEECCcCCH Confidence 1 99999999999886544No 43>3n7l_A Neurotoxin; HCR/D-SA, ganglioside binding loop; 2.00A {Clostridium botulinum} SCOP: b.29.1.0 b.42.4.0 PDB: 3azw_A 3azv_A 4isr_A 4isq_A 3n7m_A 4fvv_A* 3n7k_A 3r4s_A* 3r4u_A Probab=97.24 E-value=0.002 Score=74.76 Aligned_cols=163 Identities=13% Similarity=0.205 Sum_probs=91.6 Q ss_pred CceEEccCCCCCcceEecCCCc------cCCchhhccCCCCc-ceEEEEEEeecC-C---CCceEEEEEcCCCCeEEEEE Q FBpp0308936 51 AGIEFGEAEDGFPAFRFLQTAD------VKSPYRMLLPEKLY-EFAILITFRQSS-L---KGGYLFSVVNPLDTVVQLGV 119 (1022) Q Consensus 51 ~GV~~v~G~d~~pAy~f~~~a~------l~~pt~~~fP~~~~-eFSilaT~R~~~-~---~~g~LfsV~~~~~~~~qlgl 119 (1022) ..|+++.| ...|+.|..... |..|.. ++-+.+. +|||.+|+|+.. . ....||+..+. + .-+.+ T Consensus 32 g~v~~~~G--~g~Al~l~g~~~~~s~v~V~lPn~-li~n~~~~~FTVSfWVK~~~~~t~~~~~~If~~~~~--~-sGW~I 105 (424) T 3n7l_A 32 GNVQLNPI--FPFDFKLGSSGDDRGKVIVTQNEN-IVYNAMYESFSISFWIRINKWVSNLPGYTIIDSVKN--N-SGWSI 105 (424) T ss_dssp SBCEECSS--TTCCEEEESCSTTBCEEEEECCHH-HHHTTTTTEEEEEEEEEEETCCTTCCCEEEEEEESS--S-CEEEE T ss_pred CceEEecC--CCcEEEEccCCCccceEEEECChH-HhcccCCCcEEEEEEeccccccCCCCccEEEeccCC--C-CCeEE Confidence 45888888 456888875432 333332 2223345 899999999876 2 23457776652 2 22334 Q ss_pred EEcccccCceeEEEEEeeccCCcceeEeee------ecccCCCCeeEEEEEEe-CCeEEEEEcCccceeeeccCCCccee Q FBpp0308936 120 HLSPVVKNSYNVSLVYTQADQNIGRKLASF------GVAHVPDKWNSIALQVL-SDKVSFYYDCELRNTTLVTREPIELV 192 (1022) Q Consensus 120 ~l~~~~~~~~~i~L~Y~~~~~~~~~~~~sF------~v~ladg~WHrlaLsV~-g~~VtLyVDC~~~~t~~l~r~~~~l~ 192 (1022) .+... .+.+......+. .....| .+++. ++||||++.+. ...++||||-+++.+..+... ..+. T Consensus 106 ~l~~n-----~l~ws~~d~~G~--~~~iwfdy~~~~~~~l~-n~W~HVAvTyD~~g~~kiYINGelv~s~~i~~~-~~i~ 176 (424) T 3n7l_A 106 GIISN-----FLVFTLKQNENS--EQDINFSYDISKNAAGY-NKWFFVTITTNMMGNMMIYINGKLIDTIKVKEL-TGIN 176 (424) T ss_dssp EEETT-----EEEEEEEEETTE--EEEEEEECCGGGCTTCC-CSCEEEEEEEETTSEEEEEETTEEEEEEECCCC-TTCC T ss_pred EeCCC-----ceEEEEecCCCc--cceeeecccccccCCCC-CceEEEEEEECCCCCEEEEECCEEeeeeeeccc-cccc Confidence 44332 233433332221 121222 23455 99999999999 778899999999877543221 0111 Q ss_pred ccCCeeEE------EEeccccc-CCccccceeeeEEeeCcccccc Q FBpp0308936 193 FDSASTLY------IGQAGSII-GGKFEGYLEKINVYGNPDAINV 230 (1022) Q Consensus 193 ~~~~~~l~------iGq~g~~~-~~~F~G~LQ~L~i~~dp~~a~~ 230 (1022) +...-.+. ||+. .. +..|.|.|.+|||+..+..+++ T Consensus 177 ~~~~i~~~~g~~~~iG~~--~~~d~~f~G~IDE~RIynrALTaeE 219 (424) T 3n7l_A 177 FSKTITFQMNKIPNTGLI--TSDSDNINMWIRDFYIFAKELDDKD 219 (424) T ss_dssp CCSEEEEEEEECTTSCCC--C----CCEEEEEEEEEESSCCCHHH T ss_pred cCceeeeccCcceeeccc--ccCCCCCcEEEeEEEEECCcCCHHH Confidence 11111111 2222 11 3458899999999998755433No 44>3pme_A Type C neurotoxin; structural genomics, seattle structural genomics center for infectious disease, ssgcid, botulinum neurotoxin; 1.56A {Clostridium botulinum} SCOP: b.29.1.0 b.42.4.0 PDB: 4f83_A* 3ogg_A 3n7j_A 3obr_A 3obt_A* 3rmx_A 3rmy_A Probab=97.23 E-value=0.0043 Score=70.65 Aligned_cols=167 Identities=14% Similarity=0.199 Sum_probs=100.9 Q ss_pred CceEEccCCCCCcceEecCCCc---cCCchhhccCCCCc-ceEEEEEEeecCCCC--ceEEEEEcCCCCeEEEEEEEccc Q FBpp0308936 51 AGIEFGEAEDGFPAFRFLQTAD---VKSPYRMLLPEKLY-EFAILITFRQSSLKG--GYLFSVVNPLDTVVQLGVHLSPV 124 (1022) Q Consensus 51 ~GV~~v~G~d~~pAy~f~~~a~---l~~pt~~~fP~~~~-eFSilaT~R~~~~~~--g~LfsV~~~~~~~~qlgl~l~~~ 124 (1022) -.|+++.| ..-||.|..... +. -...++-+.++ +|||.+|+|..+.+. --.++|.+......-..|.|... T Consensus 31 G~v~~~~G--~g~A~~L~gs~~~~~i~-~~ndii~n~~~nsFSIsFWvr~~k~~t~~~~~~tIin~k~~nsGW~Isl~~n 107 (420) T 3pme_A 31 GDVQVNTI--YTNDFKLSSSGDKIIVN-LNNNILYSAIYENSSVSFWIKISKDLTNSHNEYTIINSIKQNSGWKLCIRNG 107 (420) T ss_dssp SCCEESSS--STTEEEECSTTCEEEEE-CCGGGGSSGGGTEEEEEEEEEECHHHHTCCSEEEEEEEEETTEEEEEEEETT T ss_pred CceEEEec--CCcEEEecCCCccEEEe-cCcchhhccccCceEEEEEEECCCccccCCCceEeEeeccCCCCeEEEECCC Confidence 55788888 567888876655 33 33445556677 999999999865411 12333332221222344445443 Q ss_pred ccCceeEEEEEeeccCCcceeEeeee----cccC--CCCeeEEEEEEe-CCeEEEEEcCccceeeeccCCCcceeccCCe Q FBpp0308936 125 VKNSYNVSLVYTQADQNIGRKLASFG----VAHV--PDKWNSIALQVL-SDKVSFYYDCELRNTTLVTREPIELVFDSAS 197 (1022) Q Consensus 125 ~~~~~~i~L~Y~~~~~~~~~~~~sF~----v~la--dg~WHrlaLsV~-g~~VtLyVDC~~~~t~~l~r~~~~l~~~~~~ 197 (1022) . +.++-.+....++...|. ..+. .++||+|+|+|. -..+++|+|-+++.+..+.-. ..+ ..+. T Consensus 108 -----~--liw~l~dsngn~~~i~f~y~~~~~I~d~~nkW~~VtIs~Drlg~~~IYING~lv~sk~I~~l-g~I--~~sn 177 (420) T 3pme_A 108 -----N--IEWILQDINRKYKSLIFDYSESLSHTGYTNKWFFVTITNNIMGYMKLYINGELKQSERIEDL-DEV--KLDK 177 (420) T ss_dssp -----E--EEEEEECTTSCEEEEEEECSTTTCTTSCTTSCEEEEEEEETTSEEEEEETTEEEEEEECTTS-CCC--CCCS T ss_pred -----e--EEEEEEecCCceeeEEEecccccccccccCceEEEEEEECCCCCEEEEECCEEeeecchhhc-ccc--ccCC Confidence 2 333333322233444553 2222 389999999999 577899999999999877542 122 2233 Q ss_pred eEEEEecccccCCccccceeeeEEeeCccccccc Q FBpp0308936 198 TLYIGQAGSIIGGKFEGYLEKINVYGNPDAINVT 231 (1022) Q Consensus 198 ~l~iGq~g~~~~~~F~G~LQ~L~i~~dp~~a~~~ 231 (1022) .+-++-. ......+++.|.+|+|+..+-...+. T Consensus 178 ~i~l~v~-~~~d~~~~~~Id~f~Ifnk~Lt~~EI 210 (420) T 3pme_A 178 TIVFGID-ENIDENQMLWIRDFNIFSKELSNEDI 210 (420) T ss_dssp EEEESCC-SCCCTTCCEEEEEEEEESSCCCHHHH T ss_pred eEEEEEc-ccCCCccceeeeeEEEecccCCHHHH Confidence 4444442 13446689999999999988655443No 45>3rsj_A BONT/F; clostridium botulinum type F, ganglioside binding site, GD1A; HET: NGA GAL SIA; 2.00A {Clostridium botulinum} SCOP: b.29.1.0 b.42.4.0 PDB: 3fuq_A Probab=97.15 E-value=0.023 Score=64.27 Aligned_cols=165 Identities=8% Similarity=0.119 Sum_probs=103.5 Q ss_pred CCceEEccCCCCCcceEecCCCc----cCCchhhccCCCCc-ceEEEEEEeecCCC-------CceEEEEEcCCCCeEEE Q FBpp0308936 50 FAGIEFGEAEDGFPAFRFLQTAD----VKSPYRMLLPEKLY-EFAILITFRQSSLK-------GGYLFSVVNPLDTVVQL 117 (1022) Q Consensus 50 ~~GV~~v~G~d~~pAy~f~~~a~----l~~pt~~~fP~~~~-eFSilaT~R~~~~~-------~g~LfsV~~~~~~~~ql 117 (1022) ...|.++.| -.-|+.|..... +.+ ...++-+.+. +|||.+|+|..... .-+||.-.+. ++. -. T Consensus 29 ~g~v~lv~g--~~~a~~L~~s~~s~i~I~~-~ndii~n~~~~nFSIsFWvri~k~~t~~n~~~e~tII~~~~~-nNs-GW 103 (413) T 3rsj_A 29 NGDVYIYST--NRNQFGIYSSKPSEVNIAQ-NNDIIYNGRYQNFSISFWVRIPKYFNKVNLNNEYTIIDCIRN-NNS-GW 103 (413) T ss_dssp EECCEECSS--CTTEEEEESSSSEEEEEEC-CTTTCCCCSSCCEEEEEEEECCCCCSGGGTTCCEEEEEEEET-TTE-EE T ss_pred CCceEEEec--CCcEEEEccCCCcceEEec-CcceeeccccCcEEEEEEEEcCCcccccccCCcceEEEeeec-CCC-Cc Confidence 356888888 356677765544 333 3445556677 99999999986552 2468877743 333 22 Q ss_pred EEEEcccccCceeEEEEEeeccCCcceeEeeee----cccC--CCCeeEEEEEEe-CCeEEEEEcCccceeeeccCCCcc Q FBpp0308936 118 GVHLSPVVKNSYNVSLVYTQADQNIGRKLASFG----VAHV--PDKWNSIALQVL-SDKVSFYYDCELRNTTLVTREPIE 190 (1022) Q Consensus 118 gl~l~~~~~~~~~i~L~Y~~~~~~~~~~~~sF~----v~la--dg~WHrlaLsV~-g~~VtLyVDC~~~~t~~l~r~~~~ 190 (1022) .|.+... .+.+-..+..+ .++.+.|. +.+. -++||+|+++|. -....+|||-+++....+.-.. + T Consensus 104 ~Isl~~n-----~liWtl~Ds~g--~~k~i~f~y~~~~~i~dyiNkW~~VtIt~dRlg~a~IYINGkLi~~~~I~~l~-~ 175 (413) T 3rsj_A 104 KISLNYN-----KIIWTLQDTAG--NNQKLVFNYTQMISISDYINKWIFVTITNNRLGNSRIYINGNLIDEKSISNLG-D 175 (413) T ss_dssp EEEEETT-----EEEEEEECTTS--CEEEEEEECCSBSSSCSSTTSEEEEEEEECTTSEEEEEETTEEEEEEECTTCC-C T ss_pred EEEECCC-----eEEEEEEcCCC--cceeEEEecccccchhhccCceEEEEEEEcCCCceEEEECCEEeeccChhhhc-c Confidence 3334443 33333333322 33555553 2222 389999999999 6788999999999987665421 2 Q ss_pred eeccCCeeEEEEecccccCCccccceeeeEEeeCccccccc Q FBpp0308936 191 LVFDSASTLYIGQAGSIIGGKFEGYLEKINVYGNPDAINVT 231 (1022) Q Consensus 191 l~~~~~~~l~iGq~g~~~~~~F~G~LQ~L~i~~dp~~a~~~ 231 (1022) +..+..+.++--+ ..+.+| +.|.+|+|+..+-...+. T Consensus 176 --I~ss~~I~~~vd~-~~d~~~-~~Id~l~If~k~Lt~~EI 212 (413) T 3rsj_A 176 --IHVSDNILFKIVG-CNDTRY-VGIRYFKVFDTELGKTEI 212 (413) T ss_dssp --CCCCSEEEEEEES-CCSSCE-EEEEEEEEESSCCCHHHH T ss_pred --eeecCeEEEEecc-cCCCce-EEEeeEEEecccCCHHHH Confidence 2335566666322 234477 999999999988555433No 46>2wjs_A Laminin subunit alpha-2; integrin, secreted, coiled coil, glycoprotein, laminin EGF-like domain, extracellular matrix, laminin G-like domain; HET: NAG; 2.80A {Mus musculus} Probab=97.14 E-value=0.0055 Score=74.67 Aligned_cols=126 Identities=17% Similarity=0.264 Sum_probs=81.8 Q ss_pred ceEEEEEEeecCCCCceEEEEEcCCCCeEEEEEEEcccccCceeEEEEEeeccCCcceeEeeeecccCCCCeeEEEEEEe Q FBpp0308936 87 EFAILITFRQSSLKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLASFGVAHVPDKWNSIALQVL 166 (1022) Q Consensus 87 eFSilaT~R~~~~~~g~LfsV~~~~~~~~qlgl~l~~~~~~~~~i~L~Y~~~~~~~~~~~~sF~v~ladg~WHrlaLsV~ 166 (1022) .++|.+.||.. ...+.||...+. +...+|.|+|..- .|.|.|...++. ..+.-...+.|++||+|.|... T Consensus 226 ~~~isl~FrT~-~~~GlLl~~~~~-~~~d~l~L~L~~G-----~l~~~~~~g~~~---~~l~~~~~lnDg~WH~V~v~~~ 295 (608) T 2wjs_A 226 ISTVMFKFRTF-SSSALLMYLATR-DLKDFMSVELSDG-----HVKVSYDLGSGM---TSVVSNQNHNDGKWKAFTLSRI 295 (608) T ss_dssp EEEEEEEEEES-CSEEEEEEEECT-TSSSEEEEEEETT-----EEEEEEECSSCE---EEEEEEEECCSSSCEEEEEEEE T ss_pred cceEEEEEEeC-CCCeEEEEecCC-CCCceEEEEEECC-----EEEEEEECCCCc---eEeecCccccCCCeEEEEEEEc Confidence 47777778764 456888887764 4457888888765 477777543321 1222346788999999999999 Q ss_pred CCeEEEEE-cCccceee----eccCCCcceeccCCeeEEEEecccc-------cCCccccceeeeEEe Q FBpp0308936 167 SDKVSFYY-DCELRNTT----LVTREPIELVFDSASTLYIGQAGSI-------IGGKFEGYLEKINVY 222 (1022) Q Consensus 167 g~~VtLyV-DC~~~~t~----~l~r~~~~l~~~~~~~l~iGq~g~~-------~~~~F~G~LQ~L~i~ 222 (1022) +..++|.| ||...... ..+.....+.+.....||||-.... ....|.|=|++|+|- T Consensus 296 ~~~~~l~vdd~~~~~~~~~~~~~~g~~~~l~l~~~~~lylGG~p~~~~~~~~~~~~~F~GCi~~v~in 363 (608) T 2wjs_A 296 QKQANISIVDIDSNQEENVATSSSGNNFGLDLKADDKIYFGGLPTLRNLRPEVNVKKYSGCLKDIEIS 363 (608) T ss_dssp TTEEEEEEEETTTCCEEEEEEECCSSCCCCCCCTTCEEEESCCCCCSCCCTTCCCCCCEEEEEEEEET T ss_pred ccEEEEEEEeccCCcccccccccCCcccccccCCCceEEEcCcccccccCccccccCcCccccccEEC Confidence 99999998 66542221 1111222334444578999854211 123699999999884No 47>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A* Probab=97.00 E-value=0.006 Score=80.60 Aligned_cols=122 Identities=15% Similarity=0.143 Sum_probs=81.7 Q ss_pred EEEEEEeecCCCCceEEEEEcCCCCeEEEEEEEcccccCceeEEEEEeeccCCcceeEeee-ecccCCCCeeEEEEEEeC Q FBpp0308936 89 AILITFRQSSLKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLASF-GVAHVPDKWNSIALQVLS 167 (1022) Q Consensus 89 SilaT~R~~~~~~g~LfsV~~~~~~~~qlgl~l~~~~~~~~~i~L~Y~~~~~~~~~~~~sF-~v~ladg~WHrlaLsV~g 167 (1022) .|.+.|| ++...++||.+.+......+|.|.|... .|.|.|..... ...+.+ ...+.||+||+|.|.-.+ T Consensus 1084 ~i~l~fr-T~~~~g~Ll~~~s~~~~~~~l~l~l~~G-----~l~~~~~~g~~---~~~~~~~~~~v~DG~wH~v~~~r~~ 1154 (1245) T 3qcw_A 1084 RLAIGFS-TVQKEAVLVRVDSSSGLGDYLELHIHQG-----KIGVKFNVGTD---DIAIEESNAIINDGKYHVVRFTRSG 1154 (1245) T ss_dssp EEEEEEE-BCCSSEEEEEEEECTTCCCEEEEEEETT-----EEEEEEESSSC---CEEEECCSCCCBSSSCEEEEEEEET T ss_pred eEEEEEE-EecCCeEEEEEeccCCCCceEEEEEECC-----EEEEEEECCCC---ceEeecCceEcCCCcEEEEEEEEcC Confidence 4555555 4566789999877533356888888643 47777764322 122333 467889999999999999 Q ss_pred CeEEEEEcCccceeeeccCCCcceeccCCeeEEEEecccccCCccccceeeeEEe Q FBpp0308936 168 DKVSFYYDCELRNTTLVTREPIELVFDSASTLYIGQAGSIIGGKFEGYLEKINVY 222 (1022) Q Consensus 168 ~~VtLyVDC~~~~t~~l~r~~~~l~~~~~~~l~iGq~g~~~~~~F~G~LQ~L~i~ 222 (1022) ..++|+||-..+.+. +........+.....||||.. .....|+|-|+.|+|- T Consensus 1155 ~~~~l~VD~~~~~~~-~~~g~~~~~~~~~~~l~lGg~--~~~~~F~Gcl~~v~~n 1206 (1245) T 3qcw_A 1155 GNATLQVDSWPVIER-YPAGRQLTIFNSQATIIIGGK--EQGQPFQGQLSGLYYN 1206 (1245) T ss_dssp TEEEEEETTSCCEEE-CCCSCCCCCBCSEEEEEESST--TTTCCCCEEEEEEEET T ss_pred CEEEEEECCccceee-cCCCcceEEeecCCeEEECCc--cCCCCceEEEeEEEEC Confidence 999999999765442 221111112344578999865 2346799999999873No 48>2nyy_A Botulinum neurotoxin type A; botulinum, neurotoxin, FAB, protein antibody complex, toxin- system complex; 2.61A {Clostridium botulinum} SCOP: b.29.1.6 b.42.4.2 d.92.1.7 h.4.2.1 PDB: 2nz9_A 3bta_A 3v0a_A* 3v0b_A 3v0c_A 3zus_A 3zur_A Probab=96.93 E-value=0.02 Score=71.86 Aligned_cols=167 Identities=10% Similarity=0.156 Sum_probs=100.5 Q ss_pred CCceEEccCCCCCcceEecCCCc----cCCchhhccCCCCc-ceEEEEEEeecCCCCc----eEEEEEcCCCCeEEEEEE Q FBpp0308936 50 FAGIEFGEAEDGFPAFRFLQTAD----VKSPYRMLLPEKLY-EFAILITFRQSSLKGG----YLFSVVNPLDTVVQLGVH 120 (1022) Q Consensus 50 ~~GV~~v~G~d~~pAy~f~~~a~----l~~pt~~~fP~~~~-eFSilaT~R~~~~~~g----~LfsV~~~~~~~~qlgl~ 120 (1022) ...|+++.| ..-||.|..... +. -...++-+.++ +|||.+|+|..+.+.. -.++|.+......-+.+. T Consensus 900 ~G~V~~v~G--ngnA~~L~gs~~S~~~I~-~~ndii~n~~~~nFSISFWvRipk~~~~~n~~~eyTIIn~k~nNsGW~I~ 976 (1295) T 2nyy_A 900 GSKVNFDPI--DKNQIQLFNLESSKIEVI-LKNAIVYNSMYENFSTSFWIRIPKYFNSISLNNEYTIINCMENNSGWKVS 976 (1295) T ss_dssp CTTEEECTT--CTTCEEEESSTTSCEEEE-ECGGGCCTTTTSEEEEEEEEECCCCCSGGGGGCCEEEEEEEETTEEEEEE T ss_pred CCceEEEec--CCcEEEecCCCCcceEEe-cCcchhcccccCceEEEEEEEcCCCCcccccCCceeeEeeccCCCCeEEE Confidence 456788888 457788765333 32 34555666777 9999999999766531 233443322122233444 Q ss_pred EcccccCceeEEEEEeeccCCcceeEeeeec------ccCCCCeeEEEEEEe-CCeEEEEEcCccceeeeccCCCcceec Q FBpp0308936 121 LSPVVKNSYNVSLVYTQADQNIGRKLASFGV------AHVPDKWNSIALQVL-SDKVSFYYDCELRNTTLVTREPIELVF 193 (1022) Q Consensus 121 l~~~~~~~~~i~L~Y~~~~~~~~~~~~sF~v------~ladg~WHrlaLsV~-g~~VtLyVDC~~~~t~~l~r~~~~l~~ 193 (1022) |... . +.++-.+.....+...|.+ +-..++||+|++++. -...++|+|.+++.+..+.-. .++. T Consensus 977 L~~n-----~--liWtl~DsNgn~k~i~f~y~~~~~I~dyiNkW~hVTIt~DRlg~a~IYINGkLv~sk~I~~L-g~I~- 1047 (1295) T 2nyy_A 977 LNYG-----E--IIWTLQDTQEIKQRVVFKYSQMINISDYINRWIFVTITNNRLNNSKIYINGRLIDQKPISNL-GNIH- 1047 (1295) T ss_dssp EETT-----E--EEEEEECSSSCEEEEEEECCSBSSSCSSTTSCEEEEEEEETTSEEEEEETTEEEEEEECTTC-CCCC- T ss_pred eCCC-----c--EEEEEEecCCcceeeEEecccccCcccccCceEEEEEEECCCCCeEEEECCEEeeccccccC-Ccee- Confidence 4433 2 2232222222223344431 111389999999999 467899999999999877653 2332 Q ss_pred cCCeeEEEEecccccCCccccceeeeEEeeCcccccc Q FBpp0308936 194 DSASTLYIGQAGSIIGGKFEGYLEKINVYGNPDAINV 230 (1022) Q Consensus 194 ~~~~~l~iGq~g~~~~~~F~G~LQ~L~i~~dp~~a~~ 230 (1022) .+..+.++--+ +.+..|.+.|.+|+|+..+-...+ T Consensus 1048 -ssn~Is~gv~g-~~d~n~~g~ID~F~IfnK~Lt~~E 1082 (1295) T 2nyy_A 1048 -ASNNIMFKLDG-CRDTHRYIWIKYFNLFDKELNEKE 1082 (1295) T ss_dssp -CCSEEEEEEES-CCCTTCEEEEEEEEEESSCCCHHH T ss_pred -ecCeEEEEEec-cCCCCceeeEeeEEEecCcCCHHH Confidence 23444444221 345679999999999998855433No 49>1epw_A Bontoxilysin B, botulinum neurotoxin type B; zinc, metalloprotease, transmembrane, hydrolase; 1.90A {Clostridium botulinum} SCOP: b.29.1.6 b.42.4.2 d.92.1.7 h.4.2.1 PDB: 1f31_A* 1g9a_A* 1g9b_A* 1g9c_A* 1g9d_A* 1i1e_A* 1s0b_A 1s0c_A 1s0d_A 1s0e_A 1s0f_A 1s0g_A 2np0_A 3zuq_A 2etf_A 2xhl_A 1z0h_A 4kbb_A* 2nm1_A 1f82_A ... Probab=96.90 E-value=0.023 Score=72.34 Aligned_cols=153 Identities=9% Similarity=0.189 Sum_probs=90.8 Q ss_pred CCcceEecCCCc----cCCchhhccCCCCc-ceEEEEEEeecCC-CC---------ceEEEEEcCCCCeEEEEEEEcccc Q FBpp0308936 61 GFPAFRFLQTAD----VKSPYRMLLPEKLY-EFAILITFRQSSL-KG---------GYLFSVVNPLDTVVQLGVHLSPVV 125 (1022) Q Consensus 61 ~~pAy~f~~~a~----l~~pt~~~fP~~~~-eFSilaT~R~~~~-~~---------g~LfsV~~~~~~~~qlgl~l~~~~ 125 (1022) ...|+.|..... |..+...++ +... +|||.+|+|+... .. ..+|+-.+. ...-++ .+... T Consensus 894 ~GkAl~FdGssgS~I~V~LPnnli~-ns~~d~FTISFWVK~~s~~t~~i~~f~~ne~tfIs~~~n-nsGW~I--SLedn- 968 (1290) T 1epw_A 894 DKNQFKLTSSANSKIRVTQNQNIIF-NSVFLDFSVSFWIRIPKYKNDGIQNYIHNEYTIINCMKN-NSGWKI--SIRGN- 968 (1290) T ss_dssp TTSEEEECSSTTCCEEEECCTTSSC-CCSSCCEEEEEEEECCCCCGGGHHHHHHCEEEEEEEEET-TEEEEE--EEETT- T ss_pred cCceEEecCCCCcceEEEcCccccc-CCCCCCEEEEEEeccccccCccccccccccceEEecccC-CCCceE--EecCC- Confidence 457888875433 333332221 2234 8999999999775 22 345644432 112233 33322 Q ss_pred cCceeEEEEEeeccCCcceeEeeee----cccC--CCCeeEEEEEEeCCeEEEEEcCccceeeeccCCCcceeccCCeeE Q FBpp0308936 126 KNSYNVSLVYTQADQNIGRKLASFG----VAHV--PDKWNSIALQVLSDKVSFYYDCELRNTTLVTREPIELVFDSASTL 199 (1022) Q Consensus 126 ~~~~~i~L~Y~~~~~~~~~~~~sF~----v~la--dg~WHrlaLsV~g~~VtLyVDC~~~~t~~l~r~~~~l~~~~~~~l 199 (1022) ++.+...+..+. .....|. ..+. .++||||++++....+++|||-+++.+..+.... .+ .....+ T Consensus 969 ----tL~wsl~DsnGn--~~~Iwfd~~t~~~Ipdy~NkW~HVAITyD~g~vKIYINGeLVas~sitgL~-dI--~ss~~I 1039 (1290) T 1epw_A 969 ----RIIWTLIDINGK--TKSVFFEYNIREDISEYINRWFFVTITNNLNNAKIYINGKLESNTDIKDIR-EV--IANGEI 1039 (1290) T ss_dssp ----EEEEEEECTTCC--EEEEEEECCSSCSSCSSTTSCEEEEEEECSSEEEEEETTEEEEEEECSSCC-CC--CCCSEE T ss_pred ----eEEEEEecCCCC--cceeEEecccccCCCCCCCceEEEEEEEcCCeEEEEECCEEeeccccccCc-cc--cccCee Confidence 344444332211 1122232 2222 5999999999999999999999998886554321 22 224578 Q ss_pred EEEecccccCCccccceeeeEEeeCcccc Q FBpp0308936 200 YIGQAGSIIGGKFEGYLEKINVYGNPDAI 228 (1022) Q Consensus 200 ~iGq~g~~~~~~F~G~LQ~L~i~~dp~~a 228 (1022) .+|..+. ....|.|.|.+|||+..+..+ T Consensus 1040 ~LGv~n~-~D~~F~G~IDEfRIYNRALSa 1067 (1290) T 1epw_A 1040 IFKLDGD-IDRTQFIWMKYFSIFNTELSQ 1067 (1290) T ss_dssp EEEEEES-CCTTCCEEEEEEEEESSCCCH T ss_pred EEEecCC-CCcCcceEeeeEEEECCcCCH Confidence 8887532 345689999999999987544No 50>2vxr_A Botulinum neurotoxin type G; hydrolase, ganglioside, protease, recepto secreted, binding domain, metalloprotease; 1.90A {Clostridium botulinum} SCOP: b.29.1.0 b.42.4.0 PDB: 3mpp_G Probab=96.61 E-value=0.038 Score=63.07 Aligned_cols=165 Identities=12% Similarity=0.187 Sum_probs=100.1 Q ss_pred CCceEEccCCCCCcceEecCCCc----cCCchhhccCCCCc-ceEEEEEEeecCC-CC---------ceEEEEEcCCCCe Q FBpp0308936 50 FAGIEFGEAEDGFPAFRFLQTAD----VKSPYRMLLPEKLY-EFAILITFRQSSL-KG---------GYLFSVVNPLDTV 114 (1022) Q Consensus 50 ~~GV~~v~G~d~~pAy~f~~~a~----l~~pt~~~fP~~~~-eFSilaT~R~~~~-~~---------g~LfsV~~~~~~~ 114 (1022) ...|.++. -..-||.|..... +. ....++-+.+. +|||.+|+|.... +. -+||.-.+- ... T Consensus 76 ~g~V~lv~--in~na~~L~~s~~s~i~I~-~~ndiiyN~~~~nFSIsFWvRipk~~t~~tn~y~~nEyTII~~~~n-NsG 151 (482) T 2vxr_A 76 GSDVIFND--IGNGQFKLNNSENSNITAH-QSKFVVYDSMFDNFSINFWVRTPKYNNNDIQTYLQNEYTIISCIKN-DSG 151 (482) T ss_dssp CTTCEEEC--STTCEEEEESSTTCCEEEE-CCTTTSCEESSCCEEEEEEEECCCCCGGGHHHHHHCEEEEEEEEET-TEE T ss_pred CCceEEEE--ccCcEEEecCCCCcceEEE-cccceeeccccCceEEEEEEEcCCcccccccccccCCceEEEeecC-CCC Confidence 44556665 2345666664443 22 23445555667 9999999998654 22 357766642 222 Q ss_pred EEEEEEEcccccCceeEEEEEeeccCCcceeEeeee----cccC--CCCeeEEEEEEe-CCeEEEEEcCccceeeeccCC Q FBpp0308936 115 VQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLASFG----VAHV--PDKWNSIALQVL-SDKVSFYYDCELRNTTLVTRE 187 (1022) Q Consensus 115 ~qlgl~l~~~~~~~~~i~L~Y~~~~~~~~~~~~sF~----v~la--dg~WHrlaLsV~-g~~VtLyVDC~~~~t~~l~r~ 187 (1022) =. |.+... .|.+-..+..+ .++.+.|. +.+. -++||.|+++|. -....+|||-+++....+.-. T Consensus 152 W~--Isl~~n-----~LIWtl~Ds~g--~~k~I~f~y~~~~nisdyiNkW~fITITndRlGna~IYINGkLi~~~~I~~L 222 (482) T 2vxr_A 152 WK--VSIKGN-----RIIWTLIDVNA--KSKSIFFEYSIKDNISDYINKWFSITITNDRLGNANIYINGSLKKSEKILNL 222 (482) T ss_dssp EE--EEEETT-----EEEEEEECTTS--CEEEEEEECCSCCSSCSSTTSCEEEEEEECTTSEEEEEETTEEEEEEECTTC T ss_pred cE--EEECCC-----eEEEEEEcCCC--cceeEEEecccccchhhccCceEEEEEEEcCCCceEEEECCEEeeccChhhh Confidence 23 344443 33333333222 33555554 2222 389999999999 678899999999998766532 Q ss_pred CcceeccCCeeEEEEecccccCCccccceeeeEEeeCccccccc Q FBpp0308936 188 PIELVFDSASTLYIGQAGSIIGGKFEGYLEKINVYGNPDAINVT 231 (1022) Q Consensus 188 ~~~l~~~~~~~l~iGq~g~~~~~~F~G~LQ~L~i~~dp~~a~~~ 231 (1022) +.+-.+..+.++--+ ..+..|.+.|.+|+|+..+-...+. T Consensus 223 ---~~I~~s~~I~fgvdn-~~D~n~~i~Id~l~If~keLt~~EI 262 (482) T 2vxr_A 223 ---DRINSSNDIDFKLIN-CTDTTKFVWIKDFNIFGRELNATEV 262 (482) T ss_dssp ---CCEECCSEEEEEEES-CCCTTCEEEEEEEEEESSCCCHHHH T ss_pred ---cccccCCeEEEEecc-CCCCCceeEEeeEEEecccCCHHHH Confidence 123345566666421 3456799999999999988655443No 51>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A* Probab=96.54 E-value=0.018 Score=76.07 Aligned_cols=121 Identities=16% Similarity=0.269 Sum_probs=79.5 Q ss_pred ceEEEEEEeecCCCCceEEEEEcCCCCeEEEEEEEcccccCceeEEEEEeeccCCcceeEee--eecccCCCCeeEEEEE Q FBpp0308936 87 EFAILITFRQSSLKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLAS--FGVAHVPDKWNSIALQ 164 (1022) Q Consensus 87 eFSilaT~R~~~~~~g~LfsV~~~~~~~~qlgl~l~~~~~~~~~i~L~Y~~~~~~~~~~~~s--F~v~ladg~WHrlaLs 164 (1022) ++.|.+.||... ..+.||.... +...+|.|+|... .|.|.|....+. ..+. ....+.||+||+|.|. T Consensus 859 ~~~is~~frT~~-~~GlLl~~~~--~~~dfl~l~L~~G-----~l~~~~~~g~g~---~~~~~~s~~~vnDG~WH~V~~~ 927 (1245) T 3qcw_A 859 SMHLFFQFKTTS-LDGLILYNSG--DGNDFIVVELVKG-----YLHYVFDLGNGA---NLIKGSSNKPLNDNQWHNVMIS 927 (1245) T ss_dssp CEEEEEEEECSC-SCEEEEEEEE--STTCEEEEEEETT-----EEEEEEESSSCC---EEEECCCSSCSCSSSCEEEEEE T ss_pred eEEEEEEEEECC-CCEEEEEeCC--CCCceEEEEEECC-----EEEEEEECCCCc---EEEEecCccccCCCCeEEEEEE Confidence 678888887655 5577776554 2356888888765 477777644322 2222 2567889999999999 Q ss_pred EeCCe-EEEEEcCccceeeeccCCCcceeccCCeeEEEEecccc----------cCCccccceeeeEEe Q FBpp0308936 165 VLSDK-VSFYYDCELRNTTLVTREPIELVFDSASTLYIGQAGSI----------IGGKFEGYLEKINVY 222 (1022) Q Consensus 165 V~g~~-VtLyVDC~~~~t~~l~r~~~~l~~~~~~~l~iGq~g~~----------~~~~F~G~LQ~L~i~ 222 (1022) ....+ .+|.||........-. ... ++....||||-.... ....|+|=|++|+|- T Consensus 928 ~~~~~~~~L~VD~~~~~~~~~~--~~~--l~~~~~lyvGG~~~~~~~~~~~~~~~~~~F~GCi~~l~in 992 (1245) T 3qcw_A 928 RDTSNLHTVKIDTKITTQITAG--ARN--LDLKSDLYIGGVAKETYKSLPKLVHAKEGFQGCLASVDLN 992 (1245) T ss_dssp ECTTCEEEEEETTEEEEEECCC--CCC--CCEEEEEEESCCCGGGGGGCCTTCCCSSBCCEEEEEEEET T ss_pred EcCCceEEEEECCEeeeeecCC--cce--eccCCCeEEccccccccccchhhcccccCccceecceeEC Confidence 99876 5899998764332111 112 233567999864211 124699999999994No 52>2sli_A Intramolecular trans-sialidase; hydrolase, neuraminidase; HET: SKD; 1.80A {Macrobdella decora} SCOP: b.29.1.9 b.68.1.1 PDB: 1sll_A 1sli_A* 3sli_A* 4sli_A* Probab=96.43 E-value=0.037 Score=68.58 Aligned_cols=136 Identities=16% Similarity=0.184 Sum_probs=88.0 Q ss_pred CcceEEEEEEeecC-CCCceEEEEEcCCC--CeEEEEEEEcccccCceeEEEEEeeccCCcceeEeeeecc------cCC Q FBpp0308936 85 LYEFAILITFRQSS-LKGGYLFSVVNPLD--TVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLASFGVA------HVP 155 (1022) Q Consensus 85 ~~eFSilaT~R~~~-~~~g~LfsV~~~~~--~~~qlgl~l~~~~~~~~~i~L~Y~~~~~~~~~~~~sF~v~------lad 155 (1022) |.+|+|.+.||... .....||++.+... ...+|-|.+... . .+.|+....+... ...+..+ ..+ T Consensus 34 l~~~Tv~~~~~~~~~~~~~~Lfs~~~~t~~~~n~~~~l~~~~~-g---~~~~~v~~~~~~~---~~~~~~~~~~~~~~~~ 106 (679) T 2sli_A 34 MTQGTIILSYKSTSENGIQSLFSVGNSTAGNQDRHFHIYITNS-G---GIGIELRNTDGVF---NYTLDRPASVRALYKG 106 (679) T ss_dssp CSSEEEEEEEEECCCCSEEEEEEEECCSTTCTTEEEEEEEETT-S---CEEEEEEECTTTC---EEEEEESSCCCSEETT T ss_pred ccccEEEEEEEECCCCCceEEEEecCCCCCCccccEEEEEeCC-C---EEEEEEecCCCce---eEEEecCcccceeccC Confidence 44999999999987 55556999996422 246788888653 2 3666665543221 1122222 124 Q ss_pred C-CeeEEEEEEeC--CeEEEEEcCccceeeeccCCCcce-eccCCeeEEEEecccc--cCCccccceeeeEEeeCcccc Q FBpp0308936 156 D-KWNSIALQVLS--DKVSFYYDCELRNTTLVTREPIEL-VFDSASTLYIGQAGSI--IGGKFEGYLEKINVYGNPDAI 228 (1022) Q Consensus 156 g-~WHrlaLsV~g--~~VtLyVDC~~~~t~~l~r~~~~l-~~~~~~~l~iGq~g~~--~~~~F~G~LQ~L~i~~dp~~a 228 (1022) + .||+|+++... ..++||||-..+.+..+... ..+ .+..-..++||+.... ....|.|.|.++.|+...... T Consensus 107 ~~~w~hv~~t~ds~~g~~~lyvnG~~~~~~~~~~~-~~~~~~~g~~~~~iG~~~~~g~~~~~f~G~I~dv~v~~~~ls~ 184 (679) T 2sli_A 107 ERVFNTVALKADAANKQCRLFANGELLATLDKDAF-KFISDITGVDNVTLGGTKRQGKIAYPFGGTIGDIKVYSNALSD 184 (679) T ss_dssp EECCEEEEEEEETTTTEEEEEETTEEEEEEECSSC-CCGGGSTTCCEEEESSEEETTEEESCCCEEEEEEEEESSCCCH T ss_pred CCceEEEEEEEecCCCeEEEEECCEEEEeccCCcc-eeeccCCCcceEEECCeeCCCcccceEeeEEEEEEEcCCCCCH Confidence 3 79999999965 58999999999877665421 111 1333457999984211 123499999999999876443No 53>3ffz_A Botulinum neurotoxin type E; botulinum neurotoxin serotype E, botulism, domain organization, endopeptidase, translocation, hydrolase; 2.65A {Clostridium botulinum} Probab=95.37 E-value=0.43 Score=60.32 Aligned_cols=163 Identities=8% Similarity=0.073 Sum_probs=94.6 Q ss_pred CceEEccCCCCCcceEecCCCc----cCCchhhccCCCCc-ceEEEEEEeecCCC-------C-ceEEEEEcCCCCeEEE Q FBpp0308936 51 AGIEFGEAEDGFPAFRFLQTAD----VKSPYRMLLPEKLY-EFAILITFRQSSLK-------G-GYLFSVVNPLDTVVQL 117 (1022) Q Consensus 51 ~GV~~v~G~d~~pAy~f~~~a~----l~~pt~~~fP~~~~-eFSilaT~R~~~~~-------~-g~LfsV~~~~~~~~ql 117 (1022) ..|.+|.| . .-|+.|..... +. -...++-+.+. +|||.+|+|..... + -+||.-.+. ++. -. T Consensus 876 g~V~lv~G-n-~na~~L~ss~~s~~~I~-~~ndii~n~~~~nFSIsFWvRipk~~~~~~n~~neyTII~~~~~-nNs-GW 950 (1252) T 3ffz_A 876 GDVYKYPT-N-KNQFGIYNDKLSEVNIS-QNDYIIYDNKYKNFSISFWVRIPNYDNKIVNVNNEYTIINCMRD-NNS-GW 950 (1252) T ss_dssp ECCEECTT-C-TTCEEEESSSCEEEEEE-CCTTTSCCSSCCCCEEEEEEECCCCCSTTTCCCCCEEEEEEEET-TTE-EE T ss_pred CceEEEec-C-CceEEeccCCCCceEEe-cCcceeeccccCceEEEEEEEcCCcCCcccccCCcceEEEeecC-CCC-Cc Confidence 45667777 3 45666664333 33 23444556667 99999999985441 1 358866632 222 22 Q ss_pred EEEEcccccCceeEEEEEeeccCCcceeEeeeecccC------CCCeeEEEEEEe-CCeEEEEEcCccceeeeccCCCcc Q FBpp0308936 118 GVHLSPVVKNSYNVSLVYTQADQNIGRKLASFGVAHV------PDKWNSIALQVL-SDKVSFYYDCELRNTTLVTREPIE 190 (1022) Q Consensus 118 gl~l~~~~~~~~~i~L~Y~~~~~~~~~~~~sF~v~la------dg~WHrlaLsV~-g~~VtLyVDC~~~~t~~l~r~~~~ 190 (1022) .+-+... .+.+-..+..+ .++.+.|.+.++ -++||+|+++|. -....+|||.+++....+.-. .+ T Consensus 951 ~I~l~~n-----~LiWtl~Dsng--n~k~i~f~y~~~~~i~dyiNkW~fITIt~dRlg~a~IYINGkLi~~~~I~~l-~~ 1022 (1252) T 3ffz_A 951 KVSLNHN-----EIIWTLQDNAG--INQKLAFNYGNANGISDYINKWIFVTITNDRLGDSKLYINGNLIDQKSILNL-GN 1022 (1252) T ss_dssp EEEEETT-----EEEEEEECSSS--CEEEEEEECCCCSBCCSSTTSCEEEEEEECTTSEEEEEETTEEEEEEECTTC-CC T ss_pred EEEeCCC-----eEEEEEEcCCC--cceeEEEecccccccccccCceEEEEEEEcCCCceeEEECCEEeeccchhhc-cc Confidence 2333332 23333332222 234445542211 389999999999 578899999999998766543 22 Q ss_pred eeccCCeeEEEEecccccCCccccceeeeEEeeCcccccc Q FBpp0308936 191 LVFDSASTLYIGQAGSIIGGKFEGYLEKINVYGNPDAINV 230 (1022) Q Consensus 191 l~~~~~~~l~iGq~g~~~~~~F~G~LQ~L~i~~dp~~a~~ 230 (1022) +..+..+.++=-+. .+. ..+.|.+|+|+..+-...+ T Consensus 1023 --I~ss~~I~~kl~g~-nd~-~~v~Id~l~If~k~Lt~~E 1058 (1252) T 3ffz_A 1023 --IHVSDNILFKIVNC-SYT-RYIGIRYFNIFDKELDETE 1058 (1252) T ss_dssp --CCCCSEEEEEEESC-SSC-CEEEEEEEEEESSCCCHHH T ss_pred --ceecCeEEEEecCC-CCC-cceeEeeeEeecCcCCHHH Confidence 23344554422221 122 4689999999998855533No 54>4b1m_A Levanase; hydrolase, CBM66; HET: FRU; 1.10A {Bacillus subtilis} PDB: 4b1l_A* 4azz_A Probab=94.75 E-value=0.15 Score=52.46 Aligned_cols=89 Identities=12% Similarity=0.102 Sum_probs=59.9 Q ss_pred ceEEEEEEeecC----CCCceEEEEEcCCCCeEEEEEEEcccccCceeEEEEEeeccCCcceeEeeeecccCCCCeeEEE Q FBpp0308936 87 EFAILITFRQSS----LKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLASFGVAHVPDKWNSIA 162 (1022) Q Consensus 87 eFSilaT~R~~~----~~~g~LfsV~~~~~~~~qlgl~l~~~~~~~~~i~L~Y~~~~~~~~~~~~sF~v~ladg~WHrla 162 (1022) +|.|-+.+|... .+.+++|.+.. +....+.+.|.... .++.|+ ...++.. ..++.....+..++|+++. T Consensus 65 df~l~~e~k~~~~~~~~nsGi~~r~~~--d~~~~Y~~~i~~~~---~~~~l~-~~~~g~~-~~l~~~~~~~~~g~W~~~~ 137 (185) T 4b1m_A 65 DFTYESDITIKDGNGRGAGALMFRSDK--DAKNGYLANVDAKH---DLVKFF-KFENGAA-SVIAEYKTPIDVNKKYHLK 137 (185) T ss_dssp SEEEEEEEEEEEEEEEEEEEEEEEECT--TSSSEEEEEEETTT---TEEEEE-EEETTEE-EEEEEEECCCCSSCCEEEE T ss_pred CEEEEEEEEEccCCCCccEEEEEEecC--CCCCeEEEEEECCC---CEEEEE-EecCCce-eEeeeccccCCCCCeEEEE Confidence 999999999865 46678887632 33456667777641 234443 2223211 2233333455579999999 Q ss_pred EEEeCCeEEEEEcCccceee Q FBpp0308936 163 LQVLSDKVSFYYDCELRNTT 182 (1022) Q Consensus 163 LsV~g~~VtLyVDC~~~~t~ 182 (1022) |.|.++.|++|||-.++.+. T Consensus 138 I~~~G~~i~v~vNG~~v~~~ 157 (185) T 4b1m_A 138 TEAEGDRFKIYLDDRLVIDA 157 (185) T ss_dssp EEEETTEEEEEETTEEEEEE T ss_pred EEEECCEEEEEECCEEEEEE Confidence 99999999999999987654No 55>4ccd_A Galactocerebrosidase; hydrolase, krabbe disease, glycosyl hydrolase, galactosidase D-galactal, lysosomal storage disease, enzyme-intermediate; HET: 2DG NAG; 1.97A {Mus musculus} PDB: 4ccc_A* 4cce_A* 4ufh_A* 4ufi_A* 4ufj_A* 4ufk_A* 4ufl_A* 4ufm_A* 3zr5_A* 3zr6_A* Probab=90.48 E-value=1.3 Score=54.76 Aligned_cols=88 Identities=7% Similarity=-0.078 Sum_probs=58.8 Q ss_pred ceEEEEEEeecCC-CC--ceEEEEEcCC---CCeEEEEEEEcccccCceeEEEEEeeccCCcceeEeeeecccCCCCeeE Q FBpp0308936 87 EFAILITFRQSSL-KG--GYLFSVVNPL---DTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLASFGVAHVPDKWNS 160 (1022) Q Consensus 87 eFSilaT~R~~~~-~~--g~LfsV~~~~---~~~~qlgl~l~~~~~~~~~i~L~Y~~~~~~~~~~~~sF~v~ladg~WHr 160 (1022) ||+|-+.+|.... .. +.+|.+.+.. +....+.+.|... . ++.|.. ..++ ...+++-.+.+..++||+ T Consensus 528 Dy~v~~dv~~~~~~~g~agl~fR~~~~G~~~~~~~gY~~~i~~~-G---~~~l~k-~~~g--~~~La~~~~~~~~~~w~~ 600 (654) T 4ccd_A 528 NMTVQCDVYIETPRSGGVFIAGRVNKGGILIRSATGVFFWIFAN-G---SYRVTA-DLGG--WITYASGHADVTAKRWYT 600 (654) T ss_dssp EEEEEEEEEECSTTTCEEEEEEEECCCGGGGGGCEEEEEEEETT-T---EEEEEE-ETTC--CSEEEEEECSCCTTCEEE T ss_pred cEEEEEEEEeccCCCCeEEEEEEEcCCCCCccccceEEEEEeCC-C---eEEEEE-ecCC--eEEEEeeeccCCCCceEE Confidence 9999999998763 22 3456655421 1245667777643 1 344443 3333 224444456777899999 Q ss_pred EEEEEeCCeEEEEEcCcccee Q FBpp0308936 161 IALQVLSDKVSFYYDCELRNT 181 (1022) Q Consensus 161 laLsV~g~~VtLyVDC~~~~t 181 (1022) |.|.|.+++|++|||-+++-+ T Consensus 601 l~v~v~G~~I~v~vdG~~v~~ 621 (654) T 4ccd_A 601 LTLGIKGYFAFGMLNGTILWK 621 (654) T ss_dssp EEEEEETTEEEEEETTEEEEE T ss_pred EEEEEECCEEEEEECCEEEEE Confidence 999999999999999977654No 56>1ms9_A Trans-sialidase; trans-glycosylation, protein-acrbohydrate interac beta-propeller, hydrolase; HET: LAT; 1.58A {Trypanosoma cruzi} SCOP: b.29.1.15 b.68.1.1 PDB: 1ms0_A* 1mr5_A* 1ms1_A 1ms4_A 1ms8_A* 1ms3_A* 2ah2_A* 3b69_A* 3opz_A 3pjq_A* 1s0i_A* 1s0j_A* 1ms5_A 1wcs_A 2ags_A* 2a75_A* 2fhr_A* 1n1t_A* 1n1s_A* 1n1v_A* ... Probab=89.24 E-value=5.8 Score=48.80 Aligned_cols=126 Identities=13% Similarity=0.106 Sum_probs=69.1 Q ss_pred ceEEEEEEeec--CCCCceEEEEEc-CCCCeEEEEEEEcccccCceeEEEEEeeccCCcceeEeeeecccCCCCeeEEEE Q FBpp0308936 87 EFAILITFRQS--SLKGGYLFSVVN-PLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLASFGVAHVPDKWNSIAL 163 (1022) Q Consensus 87 eFSilaT~R~~--~~~~g~LfsV~~-~~~~~~qlgl~l~~~~~~~~~i~L~Y~~~~~~~~~~~~sF~v~ladg~WHrlaL 163 (1022) +|+|+||+-.. ++..-.|+.+.- ...+.+.|+|..+.. + + -.+.|... .. .. ...---++=|+|+| T Consensus 495 ~ftlvatv~i~~~p~~~~pl~g~~~~~~~~~~~~glsy~~~-~-~--w~~~~~~~--~~-~~----~~~w~~~~~~qv~l 563 (648) T 1ms9_A 495 AFTLVASVTIHEVPKGASPLLGASLDSSGGKKLLGLSYDKR-H-Q--WQPIYGST--PV-TP----TGSWEMGKRYHVVL 563 (648) T ss_dssp EEEEEEEEEECSCCSSCEEEEEEESSSSSSSEEEEEEECTT-S-C--EEEEETTS--CC-CC----BSCCCTTCEEEEEE T ss_pred cEEEEEEEEEecCCCCCCceeEEEeccCCCcEEEEEEEeCC-C-c--EEEEeCCC--Cc-cc----cccccCCceEEEEE Confidence 99999999874 332223444331 112334444444432 1 1 12222110 00 00 01122457799999 Q ss_pred EEeCCeEEEEEcCccce-e--eeccCCCcceeccCCeeEEEEeccccc-CCccccceeeeEEeeCccc Q FBpp0308936 164 QVLSDKVSFYYDCELRN-T--TLVTREPIELVFDSASTLYIGQAGSII-GGKFEGYLEKINVYGNPDA 227 (1022) Q Consensus 164 sV~g~~VtLyVDC~~~~-t--~~l~r~~~~l~~~~~~~l~iGq~g~~~-~~~F~G~LQ~L~i~~dp~~ 227 (1022) .+++.+.++|||-+.+. . ..+.- .. ...-+.+|||-.+... .......+-++.||-.|.- T Consensus 564 ~l~~~~~s~yvdg~~~~~~~~~~~~~-~~---~~~ishfy~gg~~~~~~~~~~~vtv~nv~lynr~l~ 627 (648) T 1ms9_A 564 TMANKIGSVYIDGEPLEGSGQTVVPD-ER---TPDISHFYVGGYKRSGMPTDSRVTVNNVLLYNRQLN 627 (648) T ss_dssp EEETTEEEEEETTEECTTCCEECSCS-SC---CCCCCEEEESSCSCTTSCCCCCEEEEEEEEESSCCC T ss_pred EEeCCEEEEEECCEeccccccccccC-Cc---ccccceEEEcCCCCccCCCCCCEEEEEeEEecCCCC Confidence 99999999999998883 2 22221 11 1134789998764211 2335667889999887744No 57>1ei8_A Collagen-like peptide (Pro-HYP-Gly)4-PG-(Pro-HYP- Gly)5; triple helix, contractIle protein; 2.00A {Synthetic} SCOP: k.3.1.1 Probab=89.18 E-value=0.61 Score=33.61 Aligned_cols=12 Identities=92% Similarity=2.189 Sum_probs=4.5 Q ss_pred CCCCCCCCCCCC Q FBpp0308936 324 PPGPPGPPGPKG 335 (1022) Q Consensus 324 ~~GppGppG~~G 335 (1022) ++|++|++|++| T Consensus 15 ~pG~~G~pG~~G 26 (29) T 1ei8_A 15 PPGPPGPPGPPG 26 (29) T ss_dssp CCCCCCCCCCCC T ss_pred CCCCCCCCCCCC Confidence 333333333333No 58>1pwb_A SP-D, PSP-D, pulmonary surfactant-associated protein D; collectin, C-type lectin, alpha-helical coiled coil, carbohydrate recognition domain; HET: GLC; 1.40A {Homo sapiens} SCOP: d.169.1.1 h.1.1.1 PDB: 1pw9_A* 3ikn_A* 3ikp_A* 3ikq_A* 3ikr_A* 4e52_A* 2rie_A* 2ggx_A* 2ggu_A* 2ork_A* 2orj_A* 2ria_A* 2rib_A* 2ric_A* 2rid_A* 2os9_A* 3dbz_A 3g81_A* 3g83_A* 1b08_A ... Probab=80.42 E-value=0.41 Score=47.94 Aligned_cols=12 Identities=25% Similarity=0.952 Sum_probs=9.3 Q ss_pred cccccCCcEEEE Q FBpp0308936 967 RQSCDSKLIILC 978 (1022) Q Consensus 967 ~~~C~~~~~~lC 978 (1022) ..+|+..+..+| T Consensus 164 d~~C~~~~~~iC 175 (177) T 1pwb_A 164 DRACGEKRLVVC 175 (177) T ss_dssp EECTTSEEEEEE T ss_pred CccCCCCeeEEE Confidence 467888888888No 59>1pwb_A SP-D, PSP-D, pulmonary surfactant-associated protein D; collectin, C-type lectin, alpha-helical coiled coil, carbohydrate recognition domain; HET: GLC; 1.40A {Homo sapiens} SCOP: d.169.1.1 h.1.1.1 PDB: 1pw9_A* 3ikn_A* 3ikp_A* 3ikq_A* 3ikr_A* 4e52_A* 2rie_A* 2ggx_A* 2ggu_A* 2ork_A* 2orj_A* 2ria_A* 2rib_A* 2ric_A* 2rid_A* 2os9_A* 3dbz_A 3g81_A* 3g83_A* 1b08_A ... Probab=77.10 E-value=0.59 Score=46.75 Aligned_cols=7 Identities=0% Similarity=-0.054 Sum_probs=3.5 Q ss_pred eEEecCC Q FBpp0308936 923 MVWHGSL 929 (1022) Q Consensus 923 ~vw~Gs~ 929 (1022) .+|.|++ T Consensus 112 ~~WiGl~ 118 (177) T 1pwb_A 112 AAFLSMT 118 (177) T ss_dssp CEECSCB T ss_pred eEEEeeE Confidence 4555543No 60>2zzj_A Glucuronan lyase A; beta-jelly roll; HET: CIT; 1.80A {Trichoderma reesei} Probab=72.79 E-value=67 Score=34.36 Aligned_cols=179 Identities=13% Similarity=0.109 Sum_probs=90.6 Q ss_pred CCceEEccC--CCCCcceEecCCCc---cCCchhhccCC-CCc---ceEEEEEEeec-----CCCCceEEEEEcCC-C-- Q FBpp0308936 50 FAGIEFGEA--EDGFPAFRFLQTAD---VKSPYRMLLPE-KLY---EFAILITFRQS-----SLKGGYLFSVVNPL-D-- 112 (1022) Q Consensus 50 ~~GV~~v~G--~d~~pAy~f~~~a~---l~~pt~~~fP~-~~~---eFSilaT~R~~-----~~~~g~LfsV~~~~-~-- 112 (1022) ...|+.|.. .++..|++|.-..+ ....-.++.-. .++ ++.+-+.|+.. ......|++..... + T Consensus 21 ~~~i~~v~~~~~~G~~alr~~~~~d~~~~~~~RsE~~~~~~~~~g~~~wy~fs~~lp~d~~~~~~~~~iaQw~~~~~~~~ 100 (238) T 2zzj_A 21 QGTVSEVSNVVFKGTSALKMTQTYTPGYTGRYHSEVDHNRGYQRGEEQFYGFAFRLSEDWQFQPQSYNIAQFIANRPGAG 100 (238) T ss_dssp TCEEEEESSSCSSTTCEEEEEEECCTTCCSCCEEEEEEEEEEETTEEEEEEEEEEECTTCCCCSSEEEEEEEEEECTTCC T ss_pred CCceEEeCccccCCCCEEEEEEeCCCCCCCccceEEeecCCCCCCCcEEEEEEEECCCCCcCCCCceEEEEEEecCCCCC Confidence 345666666 44678888762211 11111111111 121 44444455542 22333466665422 1 Q ss_pred -C----eEEEEEEEcccccCceeEEEEEeecc--CC-cceeEeee--ecccCCCCeeEEEEEEe-----CCeEEEEEcCc Q FBpp0308936 113 -T----VVQLGVHLSPVVKNSYNVSLVYTQAD--QN-IGRKLASF--GVAHVPDKWNSIALQVL-----SDKVSFYYDCE 177 (1022) Q Consensus 113 -~----~~qlgl~l~~~~~~~~~i~L~Y~~~~--~~-~~~~~~sF--~v~ladg~WHrlaLsV~-----g~~VtLyVDC~ 177 (1022) + ..-+.|.+... .+.+++.... +. -.+....| ..++.-|+||+|.|.|. ...+.||+|-+ T Consensus 101 ~~~~~~~P~~~l~v~g~-----~l~~r~~~g~~~~~~~~~~~~~~~~~~~~~~G~W~~~vi~v~ws~d~~G~~~vw~nG~ 175 (238) T 2zzj_A 101 CGGDDWMPSTMIWIQNN-----QLYSRYVNGHYRQPNCGRNIVTRPNLATVSAGAWHRVVLQIKWASDNTGYFKIWFDGA 175 (238) T ss_dssp CSSSSEEEEEEEEEETT-----EEEEEEEEECCBTTBCCEEEEEEEEEEECCTTSCEEEEEEEEECSSTTEEEEEEETTE T ss_pred CCccCCCCceeEEEECC-----EEEEEEecCCccCccccCceeeecccCccCCCCeEEEEEEEEecCCCCEEEEEEECCE Confidence 1 66777877665 3444443211 11 11233334 24566899999999997 45899999999 Q ss_pred cceeeeccCCCcceeccCCee--EEEEeccccc--CCccccceeeeEEeeCcccccccCCCCCC Q FBpp0308936 178 LRNTTLVTREPIELVFDSAST--LYIGQAGSII--GGKFEGYLEKINVYGNPDAINVTCMPPPK 237 (1022) Q Consensus 178 ~~~t~~l~r~~~~l~~~~~~~--l~iGq~g~~~--~~~F~G~LQ~L~i~~dp~~a~~~C~~~~~ 237 (1022) ++....=. .+.++.... +-+|--.... .....|...+..|+.|.-..-..|++.+. T Consensus 176 ~v~~~~g~----~~~~~d~~~~yfK~GiYr~~w~~~~~~~g~~~~~~iy~D~v~ig~t~~dv~p 235 (238) T 2zzj_A 176 KVHEEYNV----ATTVDDDSVFQFRVGLYANSWHDDGHMTGTQGFRQVWYDEVAVGTTFADVDP 235 (238) T ss_dssp EEEEEEEE----CCSBSSCCEEEEEEEEECHHHHHHSSCCSSCCEEEEEEEEEEEESSHHHHCT T ss_pred EEEEEeCC----ccccCCCCcceEEEEEcCCccccCcccCCCCcceEEEEeCeEEeCcHHHcCc Confidence 87652211 111222222 4445442211 12345666777777777665556765443No 61>3zyp_A CIP1; metal binding protein, calcium-binding, CBM-containing, beta sandwich jelly roll, carbohydrate-binding; HET: NAG; 1.50A {Hypocrea jecorina} Probab=72.68 E-value=27 Score=37.11 Aligned_cols=117 Identities=6% Similarity=0.064 Sum_probs=69.8 Q ss_pred CCCCcceEecCCCccCCchhhcc-CCCCc--ceEEEEEEeecCC---CCceEEEEEcCCCCeEEEEEEEcccccCceeEE Q FBpp0308936 59 EDGFPAFRFLQTADVKSPYRMLL-PEKLY--EFAILITFRQSSL---KGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVS 132 (1022) Q Consensus 59 ~d~~pAy~f~~~a~l~~pt~~~f-P~~~~--eFSilaT~R~~~~---~~g~LfsV~~~~~~~~qlgl~l~~~~~~~~~i~ 132 (1022) |.+..+.+|...+. ....+.+| ...++ +|++=+.||..+. +...||++.+..++.. .|++.+... + T Consensus 36 hsG~~Slrv~~ga~-g~~~~~~~~~~a~psg~~y~R~~v~~~~~~~~~h~t~~~~~~~~~~~~--~lRiGgq~~----~- 107 (218) T 3zyp_A 36 HSGSNSMKVVGGPN-GYCGHIFFGTTQVPTGDVYVRAWIRLQTALGSNHVTFIIMPDTAQGGK--HLRIGGQSQ----V- 107 (218) T ss_dssp SSSSCEEEEECCSS-GGGGCEEEEECCCCSSSEEEEEEEEESSCCCSSCEEEEEEEBGGGTTC--EEEEEEETT----E- T ss_pred cCCceeEEEecCCC-CCccceeeeeccCCCCceEEEEEEEeccCCCCCcEEEEEeecCCCCCc--cEEEccccc----e- Confidence 67788888853321 11111111 12333 7888889998653 3347999987655433 366666522 2 Q ss_pred EEEeeccCCc-----ceeEeeeecccCCCCeeEEEEEEeC-CeEEEEEcCccceeee Q FBpp0308936 133 LVYTQADQNI-----GRKLASFGVAHVPDKWNSIALQVLS-DKVSFYYDCELRNTTL 183 (1022) Q Consensus 133 L~Y~~~~~~~-----~~~~~sF~v~ladg~WHrlaLsV~g-~~VtLyVDC~~~~t~~ 183 (1022) |.|....... +..-+.-.+.|..++||-|.+.|.. ..+++|||-+++.... T Consensus 108 l~~n~~sddat~p~~sp~G~a~s~~l~~~~W~C~E~~v~~~g~~~~WldG~~v~~lt 164 (218) T 3zyp_A 108 LDYNRESDDATLPDLSPNGIASTVTLPTGAFQCFEYHLGTDGTIETWLNGSLIPGMT 164 (218) T ss_dssp EEEEETTTCCEESCSSHHHHHHSCCCCCSSCEEEEEEECSSSCEEEEETTEECGGGC T ss_pred eeeeeccCcccccccCCCcccccccccCCcEEEEEEEECCCCeEEEEECCEEeeeEE Confidence 4444332111 1111111467889999999999975 4899999999987643No 62>3w9a_A CCGH131A, putative uncharacterized protein; beta-jelly roll, hydrolase; 1.99A {Coprinopsis cinerea} Probab=70.85 E-value=18 Score=38.94 Aligned_cols=76 Identities=8% Similarity=0.113 Sum_probs=51.1 Q ss_pred ceEEEEEEeecC-----CCCceEEEEEcCCCCeEEEEEEEcccccCceeEEEEEeeccCCcceeEeeeecccCCCCeeEE Q FBpp0308936 87 EFAILITFRQSS-----LKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLASFGVAHVPDKWNSI 161 (1022) Q Consensus 87 eFSilaT~R~~~-----~~~g~LfsV~~~~~~~~qlgl~l~~~~~~~~~i~L~Y~~~~~~~~~~~~sF~v~ladg~WHrl 161 (1022) --++.+.||... .+..|++..... -+++|++... .+.. .|+|.... + ..|..++.++.||+| T Consensus 93 ~~~~HfSv~~d~~~pln~sheyq~~f~ES----h~felk~G~~-~~~~--~l~~~~~~-----~-~~wstpf~~~~W~NF 159 (245) T 3w9a_A 93 NLFYHFSIKRTNTNAPDPTLEHQVMFFES----HFTELKYGVG-SNPS--NLGWYAGG-----T-ERWSTPFTADTWFNF 159 (245) T ss_dssp EEEEEEEEECCSTTCCCTTSCEEEEEETT----CSEEEEESCS-SCTT--EEEEEETT-----E-EEEEEECCTTCCEEE T ss_pred eEEEEEEEEeccccCCcCccceeeecccc----ceEEEEeCCC-CCCC--cEEEecCC-----c-eEEEeeecCCcEEEE Confidence 456666677643 355777776663 3788888843 2222 45665543 1 567899999999999 Q ss_pred EEEEeC--CeEEEEEc Q FBpp0308936 162 ALQVLS--DKVSFYYD 175 (1022) Q Consensus 162 aLsV~g--~~VtLyVD 175 (1022) ++.|.= ..|.+|.- T Consensus 160 Ai~iDf~~nt~~vy~S 175 (245) T 3w9a_A 160 AYDIDFTAKTVGLWAS 175 (245) T ss_dssp EEEEETTTTEEEEEEE T ss_pred EEEeecCCCEEEEEEe Confidence 998855 68888764No 63>4le3_A Beta-glucanase; GH131, hydrolase; 1.80A {Podospora anserina} PDB: 4le4_A* Probab=66.63 E-value=33 Score=37.22 Aligned_cols=77 Identities=9% Similarity=0.144 Sum_probs=50.4 Q ss_pred ceEEEEEEeecC-----CCCceEEEEEcCCCCeEEEEEEEc----ccccCceeEEEEEeeccCCcceeEeeeecccCCCC Q FBpp0308936 87 EFAILITFRQSS-----LKGGYLFSVVNPLDTVVQLGVHLS----PVVKNSYNVSLVYTQADQNIGRKLASFGVAHVPDK 157 (1022) Q Consensus 87 eFSilaT~R~~~-----~~~g~LfsV~~~~~~~~qlgl~l~----~~~~~~~~i~L~Y~~~~~~~~~~~~sF~v~ladg~ 157 (1022) --++.+.||.+. .+..|++..... .+++|++. ....+..+ |++.... ...|.+++.++. T Consensus 94 ~~~~HfSv~~d~~~pln~shEyqi~F~ES----h~~elk~G~~~g~~~~~~~~--l~~~~~~------~~~wstp~~~~~ 161 (252) T 4le3_A 94 KVYYHFSLMRKDINAPATTREHQIAFFES----HFTELKSGWLSGAPGISDTL--LRWCVGG------QTQWSVEWAADV 161 (252) T ss_dssp EEEEEEEEECCSTTCCCTTSCEEEEEETT----CSEEEEESCCSSSCCGGGGE--EEEEETT------EEEEEEECCTTC T ss_pred eEEEEEEEEeCcCcCCCCCcceeEEeecc----cEEEEEeccccCCCCCCCCe--EEEecCC------ceEEEeeeccCc Confidence 445566666532 256788877773 37888886 11112233 4454431 246789999999 Q ss_pred eeEEEEEEe--CCeEEEEEc Q FBpp0308936 158 WNSIALQVL--SDKVSFYYD 175 (1022) Q Consensus 158 WHrlaLsV~--g~~VtLyVD 175 (1022) ||+||+.|. .+.|.+|.- T Consensus 162 W~NFA~~iDf~~nt~~v~~S 181 (252) T 4le3_A 162 WHNVAYEIDFAAGTVGFWHS 181 (252) T ss_dssp CEEEEEEEETTTTEEEEEEE T ss_pred EEEEEEEeeecCCEEEEEEe Confidence 999999988 788999864No 64>3i8t_A Galectin-4; S-type lectin, carbohydrate binding, molecular recognition, sugar binding protein; HET: LBT; 2.10A {Mus musculus} SCOP: b.29.1.0 PDB: 2dyc_A Probab=59.36 E-value=1.6e+02 Score=29.65 Aligned_cols=121 Identities=12% Similarity=0.106 Sum_probs=64.1 Q ss_pred CCCcceEecCCCc----cCCchhhccCCCCc-ceEEEEEEeecCCCCceEEEEEcCCCCeEEEEEEEcccccCceeEEEE Q FBpp0308936 60 DGFPAFRFLQTAD----VKSPYRMLLPEKLY-EFAILITFRQSSLKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLV 134 (1022) Q Consensus 60 d~~pAy~f~~~a~----l~~pt~~~fP~~~~-eFSilaT~R~~~~~~g~LfsV~~~~~~~~qlgl~l~~~~~~~~~i~L~ 134 (1022) ..+|||....... ...|+...+|.+|. .=+|+++=+.......+-+.+....+...-+.|.++.+-.....|..- T Consensus 10 ~~~~~~~~~~~~~~~~~p~vPf~~~ip~gL~~G~~I~I~G~v~~~a~rF~Inl~~g~~~~~dIalHfnpRf~~~~~IV~N 89 (164) T 3i8t_A 10 HTDPAYVPAPGYQPTYNPTLPYKRPIPGGLSVGMSVYIQGMAKENMRRFHVNFAVGQDDGADVAFHFNPRFDGWDKVVFN 89 (164) T ss_dssp ---------------CCCCSSEEEECTTCCCTTCEEEEEEEECTTCCBEEEEEESSSSTTCCEEEEEEEECSSSCEEEEE T ss_pred cCCcccccCCCCCcccCCCCCEEeecCCCCcCCCEEEEEEEECCCCCEEEEEeccCCCCCCCEEEEEeeeeCCCCEEEEE Confidence 4578898775543 35677888888885 556666555554455566666643211223445555542111233333 Q ss_pred EeeccCCcceeEeeeecccCCCCeeEEEEEEeCCeEEEEEcCcccee Q FBpp0308936 135 YTQADQNIGRKLASFGVAHVPDKWNSIALQVLSDKVSFYYDCELRNT 181 (1022) Q Consensus 135 Y~~~~~~~~~~~~sF~v~ladg~WHrlaLsV~g~~VtLyVDC~~~~t 181 (1022) .. .++.+.+.-.....+...|+=-.|.|.+..+...++||-..+.+ T Consensus 90 S~-~~g~WG~EEr~~~~PF~~G~~F~l~I~~~~~~f~V~VNg~~~~~ 135 (164) T 3i8t_A 90 TM-QSGQWGKEEKKKSMPFQKGKHFELVFMVMPEHYKVVVNGNSFYE 135 (164) T ss_dssp EE-ETTEECCCEEESCCCCCTTCEEEEEEEECSSEEEEEETTEEEEE T ss_pred cc-cCCEeCCCcccCCCCCccCCEEEEEEEEccCEEEEEECCEEEEE Confidence 32 23333222222235667888899999999999999999887654No 65>2dpr_A Conantokin-T, CON-T; conantoxin, nmdar antagonist, GLA-containing, metal B protein; HET: CGU; 1.70A {Conus tulipa} PDB: 1ont_A* Probab=56.72 E-value=5.7 Score=25.50 Aligned_cols=12 Identities=50% Similarity=0.717 Sum_probs=10.7 Q ss_pred hHHHHHHHHhhh Q FBpp0308936 1010 ADEYAAHLENLL 1021 (1022) Q Consensus 1010 ~~~~~~~~~~~~ 1021 (1022) |+||++.||+|. T Consensus 2 eeeyqemlenlr 13 (21) T 2dpr_A 2 EEEYQEMLENLR 13 (26) T ss_dssp CHHHHHHHHHHH T ss_pred cHHHHHHHHHHH Confidence 689999999985No 66>3imm_A Putative secreted glycosylhydrolase; YP_001301887.1, putative glycosyl hydrolase; HET: MSE; 2.00A {Parabacteroides distasonis atcc 8503} Probab=53.98 E-value=18 Score=37.62 Aligned_cols=103 Identities=13% Similarity=0.239 Sum_probs=54.7 Q ss_pred hccCCCCc-ceEEEEEEeec-CCCCceEEEEEcCCCC-eEEEEEEEcccccCce-eEEEEEeeccCCcceeEe-eeeccc Q FBpp0308936 79 MLLPEKLY-EFAILITFRQS-SLKGGYLFSVVNPLDT-VVQLGVHLSPVVKNSY-NVSLVYTQADQNIGRKLA-SFGVAH 153 (1022) Q Consensus 79 ~~fP~~~~-eFSilaT~R~~-~~~~g~LfsV~~~~~~-~~qlgl~l~~~~~~~~-~i~L~Y~~~~~~~~~~~~-sF~v~l 153 (1022) .++.+.-+ +|.|.+-+|.. ..++|++|......+. ..-++++|........ .+. .+...++.-....+ .-.... T Consensus 39 ~l~t~~~y~df~L~~e~k~~~~~NSGi~~r~~~~~~~~~~G~E~Qi~d~~~~~~~~~~-~~~~~G~ly~~~~~~~~~~~k 117 (201) T 3imm_A 39 SIWTKDEYENFELDLDFKTDVGTNSGVVVYCTDTKDWIPNSVEIQIADDHCEKWGNGK-PYEKCGAIYGHLGAVQDKVVK 117 (201) T ss_dssp CEEESSCBCSEEEEEEEEECTTCEEEEEEEESCSSSCTTSSEEEEEECTTCCTTTTCC-GGGSTTSBTTTBCCSSSCCSC T ss_pred cEEECCcccCEEEEEEEEeCCCCCCEEEEEeccCCCCcCceEEEEEECCCCCcccccC-CccccceeecccCcccccccC Confidence 34444435 99999999985 4567888877653110 0012344433211000 000 00001110000000 001112 Q ss_pred CCCCeeEEEEEEeCCeEEEEEcCccceee Q FBpp0308936 154 VPDKWNSIALQVLSDKVSFYYDCELRNTT 182 (1022) Q Consensus 154 adg~WHrlaLsV~g~~VtLyVDC~~~~t~ 182 (1022) ..++|+++-|.|.+++|++|||-.++... T Consensus 118 p~geWn~~~I~~~g~~i~v~lNG~~v~~~ 146 (201) T 3imm_A 118 KPGEWNHMRIKCAGQHIMVILNGKKVTEM 146 (201) T ss_dssp CTTSEEEEEEEEETTEEEEEETTEEEEEE T ss_pred CCCccEEEEEEEECCEEEEEECCEEEEEE Confidence 36899999999999999999999998763No 67>3s5q_A Putative glycosylhydrolase; concanavalin A-like lectins/glucanases, structural genomics, center for structural genomics, JCSG; 1.85A {Parabacteroides distasonis} Probab=48.25 E-value=24 Score=37.20 Aligned_cols=102 Identities=11% Similarity=0.206 Sum_probs=54.9 Q ss_pred hccCCCCc-ceEEEEEEeec-CCCCceEEEEEcCCCC-eEEEEEEEcccccCceeEEEEEe--eccCCcceeEe-eeecc Q FBpp0308936 79 MLLPEKLY-EFAILITFRQS-SLKGGYLFSVVNPLDT-VVQLGVHLSPVVKNSYNVSLVYT--QADQNIGRKLA-SFGVA 152 (1022) Q Consensus 79 ~~fP~~~~-eFSilaT~R~~-~~~~g~LfsV~~~~~~-~~qlgl~l~~~~~~~~~i~L~Y~--~~~~~~~~~~~-sF~v~ 152 (1022) .++.+.-+ +|.|.+-+|.. ..++|++|......+. ..-++++|......... -.+. ..++.-....+ .-... T Consensus 52 ~L~t~~~f~dF~L~~e~k~~~~~NSGI~~r~~~~~~~~~~G~E~QIld~~~~~~~--~~~~~~~~GslY~~~~~~~~~~~ 129 (214) T 3s5q_A 52 SIWTKVQYENFILDLEFKTDVNTNSGVVIYCTDKGNWIPSSIEIQIADDHHPEWQ--SYPEYWRCGSIYGHKGANEQLVV 129 (214) T ss_dssp CEEESSCBCSEEEEEEEEECTTCEEEEEEEESCSTTCGGGSEEEEEECTTSGGGG--GSCGGGSTTSBTTTBCCSSSCCS T ss_pred cEEECCeeccEEEEEEEEECCCCccEEEEEecCCCCCcceEEEEEEECCCCCccc--ccCCCCceeeeccccCccccccc Confidence 34444445 99999999985 4677888877653111 00123444322110000 0000 01110000001 00111 Q ss_pred cCCCCeeEEEEEEeCCeEEEEEcCccceee Q FBpp0308936 153 HVPDKWNSIALQVLSDKVSFYYDCELRNTT 182 (1022) Q Consensus 153 ladg~WHrlaLsV~g~~VtLyVDC~~~~t~ 182 (1022) ...++|+++-|.|.+++|++|||-.++... T Consensus 130 kp~geWn~~~I~~~g~~i~v~lNG~~v~~~ 159 (214) T 3s5q_A 130 KKPGEWNRMIITAKGQQIDIELNGKHIVSA 159 (214) T ss_dssp CCTTSEEEEEEEEETTEEEEEETTEEEEEE T ss_pred CCCCceEEEEEEEECCEEEEEECCEEEEEE Confidence 236899999999999999999999998663No 68>3wvj_A Beta-glucanase; thermostability, industrial enzyme, pastoris, A classic beta-jellyroll fold, hydrolase; HET: B3P; 1.95A {Clostridium thermocellum} Probab=44.75 E-value=3.2e+02 Score=28.32 Aligned_cols=28 Identities=14% Similarity=0.290 Sum_probs=25.7 Q ss_pred CCCeeEEEEEEeCCeEEEEEcCccceee Q FBpp0308936 155 PDKWNSIALQVLSDKVSFYYDCELRNTT 182 (1022) Q Consensus 155 dg~WHrlaLsV~g~~VtLyVDC~~~~t~ 182 (1022) ...||..+|....+.|++|||-+++.+. T Consensus 143 ~~~fH~Y~~~W~~~~i~~yvDg~~~~~~ 170 (220) T 3wvj_A 143 SQDFHTYGFEWRPDYIDFYVDGKKVYRG 170 (220) T ss_dssp TTSCEEEEEEEETTEEEEEETTEEEEEE T ss_pred CCCcEEEEEEEECCEEEEEECCEEEEEE Confidence 5799999999999999999999988764No 69>1buu_A Protein (mannose-binding protein A); lectin, HOST defense, metalloprotein, sugar binding protein; 1.90A {Rattus norvegicus} SCOP: d.169.1.1 h.1.1.1 Probab=44.02 E-value=5.8 Score=39.57 Aligned_cols=12 Identities=25% Similarity=0.656 Sum_probs=10.1 Q ss_pred cccccCCcEEEE Q FBpp0308936 967 RQSCDSKLIILC 978 (1022) Q Consensus 967 ~~~C~~~~~~lC 978 (1022) ..+|+.++..+| T Consensus 153 d~~C~~~~~~IC 164 (168) T 1buu_A 153 DISCQASHTAVC 164 (168) T ss_dssp EECTTSCEEEEE T ss_pred CcCCCCCeeEEE Confidence 468999999998No 70>3u1x_A Putative glycosyl hydrolase; glycosyl hydrolysis, carbohydrate metabolism,, structural GE joint center for structural genomics, JCSG; HET: MSE PGE; 1.70A {Parabacteroides distasonis} Probab=40.64 E-value=77 Score=33.69 Aligned_cols=97 Identities=13% Similarity=0.123 Sum_probs=52.0 Q ss_pred ceEEEEEEeec-CCCCceEEEEEcCCC----CeEEEEEEEcccccCce---eEEE-EE--eeccCCcceeEeeeecccCC Q FBpp0308936 87 EFAILITFRQS-SLKGGYLFSVVNPLD----TVVQLGVHLSPVVKNSY---NVSL-VY--TQADQNIGRKLASFGVAHVP 155 (1022) Q Consensus 87 eFSilaT~R~~-~~~~g~LfsV~~~~~----~~~qlgl~l~~~~~~~~---~i~L-~Y--~~~~~~~~~~~~sF~v~lad 155 (1022) +|.|.+-+|.. ..++|++|.+..... -..-++++|........ ...+ .| ...++.-....+.-...... T Consensus 80 dF~L~~e~k~~~~~NSGI~~r~~~~~~~~~~~~~g~E~QIld~~~~~~~~~~~~~~~~~~~~~G~ly~~~~~~~~~~~~~ 159 (236) T 3u1x_A 80 NFQIKWDWKIGAQGNSGFLYHVQEGPKYKAPFETGPEYQLIDDDNYPWVSETGKEGLEDWQKTGCNYAMYVPETKQVNPP 159 (236) T ss_dssp SEEEEEEEEECTTCEEEEEEEECCSTTCSCGGGTSCEEEEECTTCCCCBCTTSCBSCCGGGSTTCBTTTBCCSSCCCCCT T ss_pred cEEEEEEEEeCCCCccEEEEEeccCccccCCCcceEEEEEECCCCCcccccccccCCCccccccccccccCCccccCCCC Confidence 99999999985 467788777654211 00113444432211000 0000 00 00110000011111122336 Q ss_pred CCeeEEEEEEeCCeEEEEEcCccceeee Q FBpp0308936 156 DKWNSIALQVLSDKVSFYYDCELRNTTL 183 (1022) Q Consensus 156 g~WHrlaLsV~g~~VtLyVDC~~~~t~~ 183 (1022) ++|+++-|.|.+++|+++||-.++.... T Consensus 160 geWn~~~I~~~g~~i~v~lNG~~v~~~~ 187 (236) T 3u1x_A 160 GEWNSSMVLYKDGYVEHWLNGEKLFSFQ 187 (236) T ss_dssp TSCEEEEEEEETTEEEEEETTEEEEEEE T ss_pred CcceEEEEEEECCEEEEEECCEEEEEEe Confidence 8999999999999999999999887643No 71>3h3l_A Putative sugar hydrolase; YP_001304206.1, structural genomic center for structural genomics, JCSG; HET: MSE; 1.59A {Parabacteroides distasonis atcc 8503} Probab=37.26 E-value=29 Score=37.28 Aligned_cols=103 Identities=14% Similarity=0.087 Sum_probs=54.8 Q ss_pred ccCCCCc-ceEEEEEEeec-CCCCceEEEEEcCCCCe---EEEEEEEcccccCceeEEE---EEeeccCCcceeEeeeec Q FBpp0308936 80 LLPEKLY-EFAILITFRQS-SLKGGYLFSVVNPLDTV---VQLGVHLSPVVKNSYNVSL---VYTQADQNIGRKLASFGV 151 (1022) Q Consensus 80 ~fP~~~~-eFSilaT~R~~-~~~~g~LfsV~~~~~~~---~qlgl~l~~~~~~~~~i~L---~Y~~~~~~~~~~~~sF~v 151 (1022) |+.+.-+ +|.|.+-+|.. ..++|+.|.+......- .-++++|........- .+ -....++.-....+.-.. T Consensus 70 L~t~~~y~dF~L~~E~k~~~~~NSGI~~r~~~~~g~~~~~~g~E~QIlD~~~~~~~-~~g~~~~~~~GslY~~~~~~~~~ 148 (241) T 3h3l_A 70 LIYDKKFKNFVFEIEWKIDKAGNSGIFYTAQEIEGTPIYYSSPEYQLLDNENMPDA-WEGCDGNRQAGAVYDMIMPDPQP 148 (241) T ss_dssp EEESSCBSSEEEEEEEEECBTCEEEEEEEECCCTTSCGGGSSCEEEEECTTTCGGG-SSSSTTTTSTTSBTTTBCCSSCC T ss_pred EeEcCccccEEEEEEEEeCCCCCcEEEEEecCCCCCccccceEEEEEeCCCCCCcc-ccccCCCCcccccccccCccccc Confidence 4434335 99999999985 46778887766432110 1123444321000000 00 000001000000011112 Q ss_pred ccCCCCeeEEEEEEeCCeEEEEEcCccceeee Q FBpp0308936 152 AHVPDKWNSIALQVLSDKVSFYYDCELRNTTL 183 (1022) Q Consensus 152 ~ladg~WHrlaLsV~g~~VtLyVDC~~~~t~~ 183 (1022) ....++|+++-|.|.+++|+++||-.++.... T Consensus 149 ~~p~geWN~~~I~~~g~~i~v~lNG~~V~~~~ 180 (241) T 3h3l_A 149 VKPYGNWNKTRIVVYNQRVIHYMNDVKILEFQ 180 (241) T ss_dssp CCCTTSCEEEEEEEETTEEEEEETTEEEEEEE T ss_pred cCCCCceEEEEEEEECCEEEEEECCEEEEEEe Confidence 23368999999999999999999999887643No 72>3i4i_A 1,3-1,4-beta-glucanase; beta-sandwich, hydrolase; 1.89A {Uncultured murine large bowel bacteriuorganism_taxid} SCOP: b.29.1.2 Probab=35.99 E-value=4.6e+02 Score=27.56 Aligned_cols=29 Identities=10% Similarity=0.170 Sum_probs=26.1 Q ss_pred CCCCeeEEEEEEeCCeEEEEEcCccceee Q FBpp0308936 154 VPDKWNSIALQVLSDKVSFYYDCELRNTT 182 (1022) Q Consensus 154 adg~WHrlaLsV~g~~VtLyVDC~~~~t~ 182 (1022) ....||..+|....+.|++|||-+++.+. T Consensus 160 ~~~~fH~Y~ieW~~~~I~~yvDg~~~~~~ 188 (234) T 3i4i_A 160 ASEDFHIYAFNWQPNYIAWLVDGEEVYRA 188 (234) T ss_dssp TTTSCEEEEEEEETTEEEEEETTEEEEEE T ss_pred CCCCcEEEEEEEECCEEEEEECCEEEEEE Confidence 36799999999999999999999988774No 73>3hbk_A Putative glycosyl hydrolase; YP_001302580.1, WAS domain of U function (DUF1080), structural genomics; HET: MSE; 2.36A {Parabacteroides distasonis atcc 8503} Probab=35.16 E-value=92 Score=33.33 Aligned_cols=103 Identities=16% Similarity=0.183 Sum_probs=54.9 Q ss_pred hccCCCCc-ceEEEEEEeec-CCCCceEEEEEcCCCC---eEEEEEEEcccccCceeEEEEEe------eccCCcceeEe Q FBpp0308936 79 MLLPEKLY-EFAILITFRQS-SLKGGYLFSVVNPLDT---VVQLGVHLSPVVKNSYNVSLVYT------QADQNIGRKLA 147 (1022) Q Consensus 79 ~~fP~~~~-eFSilaT~R~~-~~~~g~LfsV~~~~~~---~~qlgl~l~~~~~~~~~i~L~Y~------~~~~~~~~~~~ 147 (1022) .++.+.-+ +|.|.+-+|.. ..++|++|.+...... ..-++++|....... .. ..+. ..++.-....+ T Consensus 77 ~l~t~~~y~dF~L~~E~k~~~~~NSGI~~r~~~~~~~~~~~~g~E~QIld~~~~~-~~-~~g~~~~~~~~~G~ly~~~~~ 154 (245) T 3hbk_A 77 DIVTEGEYSAFEFSVDFKITEGANSGIKYFVTEQEKQKGSAYGLEFQLLDDAKHP-DA-KLYTTFPGSRTLGSLYDLKKS 154 (245) T ss_dssp CEEESSCBSSEEEEEEEEECTTCEEEEEEEECCCSCSSSCCCCEEEEEECTTTCT-TT-TCCSSSTTTTSTTSBTTTBCC T ss_pred eEEECCccccEEEEEEEEeCCCCCcEEEEEeccCCCCCCcceEEEEEEECCCCCC-cc-ccccccCCCccEeeccccccc Confidence 34444445 99999999985 4667887776543110 112334443321100 00 0000 00000000000 Q ss_pred eeecccCCCCeeEEEEEE-eCCeEEEEEcCccceeee Q FBpp0308936 148 SFGVAHVPDKWNSIALQV-LSDKVSFYYDCELRNTTL 183 (1022) Q Consensus 148 sF~v~ladg~WHrlaLsV-~g~~VtLyVDC~~~~t~~ 183 (1022) .-......++|+++-|.| .+++|++|||-.++.... T Consensus 155 ~~~~~~p~geWN~~~I~~~~g~~i~v~lNG~~V~~~~ 191 (245) T 3hbk_A 155 ENIHFNGVGEWNTAVVKVFPNNHVEHWLNGVKVLEYE 191 (245) T ss_dssp CSCCCCCTTSEEEEEEEECTTCEEEEEETTEEEEEEE T ss_pred ccccCCCCCccEEEEEEEEcCCEEEEEECCEEEEEee Confidence 101122258999999999 899999999999987643No 74>1axk_A Gluxyn-1; bifunctional, fusion protein, 1,4-beta-xylanase, 1,3-1,4-beta-glucanase, hybrid enzyme; 2.10A {Bacillus subtilis} SCOP: b.29.1.2 b.29.1.11 Probab=34.68 E-value=5.2e+02 Score=29.77 Aligned_cols=68 Identities=16% Similarity=0.291 Sum_probs=43.5 Q ss_pred CCCeeEEEEEEeCCeEEEEEcCccceeee--ccCCCcceeccCCeeEEEEec-----cc-ccCCccccceeeeEEeeCcc Q FBpp0308936 155 PDKWNSIALQVLSDKVSFYYDCELRNTTL--VTREPIELVFDSASTLYIGQA-----GS-IIGGKFEGYLEKINVYGNPD 226 (1022) Q Consensus 155 dg~WHrlaLsV~g~~VtLyVDC~~~~t~~--l~r~~~~l~~~~~~~l~iGq~-----g~-~~~~~F~G~LQ~L~i~~dp~ 226 (1022) ...||..+|....+.|++|||-+++.+.. ++..+..|.+ .|+++.. +. .....+.-.|.-|||+.... T Consensus 83 ~~~FHtY~veWtp~~I~wyVDG~~v~t~~~~~P~~P~~liL----NlwvGgg~g~W~G~p~~~~P~~m~VDyVRVYq~~~ 158 (394) T 1axk_A 83 SKGFHTYAFDWQPGYIKWYVDGVLKHTATANIPSTPGKIMM----NLWNGTGVDDWLGSYNGANPLYAEYDWVKYTSNAS 158 (394) T ss_dssp GGSCEEEEEEEETTEEEEEETTEEEEEECSSCCCSCBEEEE----EEEEBSSCHHHHCCCCCCCCEEEEEEEEEEEECCC T ss_pred CCCeEEEEEEEECCEEEEEECCEEEEEECCCCCCCCeEEEE----EEEccCCccccCCCCCCCCCeEEEEEEEEeeccCC Confidence 46899999999999999999999887642 3333333322 3455420 00 11123566788888887653No 75>3osd_A Putative glycosyl hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE; 1.80A {Bacteroides thetaiotaomicron} PDB: 3nmb_A 4hxc_A* Probab=34.57 E-value=48 Score=36.12 Aligned_cols=28 Identities=18% Similarity=0.110 Sum_probs=25.7 Q ss_pred CCCeeEEEEEEeCCeEEEEEcCccceee Q FBpp0308936 155 PDKWNSIALQVLSDKVSFYYDCELRNTT 182 (1022) Q Consensus 155 dg~WHrlaLsV~g~~VtLyVDC~~~~t~ 182 (1022) .++|+++-|.|.+++|+.|||-.++... T Consensus 178 ~geWN~~~I~v~g~~i~v~lNG~~V~~~ 205 (265) T 3osd_A 178 FGEWNKAKIMVYKGTVVHGQNDENVLEY 205 (265) T ss_dssp TTSCEEEEEEEETTEEEEEETTEEEEEE T ss_pred CCccEEEEEEEECCEEEEEECCEEEEEE Confidence 6899999999999999999999988764No 76>4jqt_A Putative glycosyl hydrolase; PF06439 family protein, DUF1080, structural genomics, joint for structural genomics, JCSG; HET: MSE; 2.49A {Bacteroides thetaiotaomicron} Probab=31.65 E-value=1.2e+02 Score=35.35 Aligned_cols=101 Identities=16% Similarity=0.286 Sum_probs=56.2 Q ss_pred hccCCCCc-ceEEEEEEeecC-CCCceEEEEEcCCC----CeEEEEEEEcccccCceeEEEEEeeccCCccee---Eeee Q FBpp0308936 79 MLLPEKLY-EFAILITFRQSS-LKGGYLFSVVNPLD----TVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRK---LASF 149 (1022) Q Consensus 79 ~~fP~~~~-eFSilaT~R~~~-~~~g~LfsV~~~~~----~~~qlgl~l~~~~~~~~~i~L~Y~~~~~~~~~~---~~sF 149 (1022) .++.+.-+ ||.|.+-+|... .++|++|....... ...-+.+.+....+. .. --+|.......... .... T Consensus 44 ~l~t~~~y~dF~L~~e~k~~~~~NSGI~~r~~~~~~~~~~~~~gyqvqi~~~~~~-~~-g~ly~~~~~g~l~~~~~~p~~ 121 (431) T 4jqt_A 44 FLATTKNYGDFILEFDFKIDDGLNSGVQLRSESKKDYQNGRVHGYQFEIDPSKRA-WS-GGIYDEARRNWLYPLTLNPAA 121 (431) T ss_dssp EEEESSCBSSEEEEEEEEECTTCCEEEEEEEBCCTTTGGGCCBEEEEEECCSTTC-CT-TCEEEETTTEEEECGGGSGGG T ss_pred eEEeCCccccEEEEEEEEeCCCCceEEEEEecCcccccCCceeEEEEEEcCCCCC-Cc-CcccCcCccceecccccCchh Confidence 34444445 999999999864 67788887754211 011234555443110 00 01232211000000 0000 Q ss_pred ecccCCCCeeEEEEEEeCCeEEEEEcCcccee Q FBpp0308936 150 GVAHVPDKWNSIALQVLSDKVSFYYDCELRNT 181 (1022) Q Consensus 150 ~v~ladg~WHrlaLsV~g~~VtLyVDC~~~~t 181 (1022) ...+-.++|+++.|.|.+++|++|||-.++.. T Consensus 122 ~~~~~~geWn~~~I~~~g~~i~v~lNG~~v~~ 153 (431) T 4jqt_A 122 KTAFKNNAWNKARIEAIGNSIRTWINGVPCAN 153 (431) T ss_dssp GGCCCTTSCEEEEEEEETTEEEEEETTEEEEE T ss_pred hcccCCCCcEEEEEEEECCEEEEEECCEEEEE Confidence 11233789999999999999999999988754No 77>1o91_A Collagen alpha 1(VIII) chain; C1Q_LIKE_domain, extracellular matrix, adhesion, connective tissue, repeat, structural protein; HET: CPS; 1.9A {Mus musculus} SCOP: b.22.1.1 Probab=31.61 E-value=12 Score=38.33 Aligned_cols=55 Identities=25% Similarity=0.349 Sum_probs=23.9 Q ss_pred CcEEecCccccccCCCCcccCCCc-eeecCCCccCCCCCCCcceEEecCCCCcccccCcccC Q FBpp0308936 881 GDVLFNSWKGIFNGQGGFFSQAPR-IYSFSGKNVMTDSTWPMKMVWHGSLPNGERSMDTYCD 941 (1022) Q Consensus 881 g~vl~~~~~~l~~~~~~~~~~~~~-i~~f~~~~~~~~~~~~~k~vw~Gs~~~g~~~~~~~C~ 941 (1022) +.|+.|.-...-. .-++|+...+ +|.|+=+-.. ..+.+|..+..++......+|+ T Consensus 70 d~v~~N~G~~yn~-~TG~FTapv~G~Y~Fs~~~~~-----~~~~~~v~L~~Ng~~~~~~~~~ 125 (178) T 1o91_A 70 DKLLYNGRQNYNP-QTGIFTCEVPGVYYFAYHVHC-----KGGNVWVALFKNNEPMMYTYDE 125 (178) T ss_dssp CEEEEEETTCEET-TTTEEECCSCEEEEEEEEEEE-----EEEEEEEEEEETTEEEEEEEEC T ss_pred CEEEEcCCCCccC-CCCeEEeeCCeEEEEEEEEEe-----CCceEEEEEEECCEEEEEEEec Confidence 4455443333332 2235555555 6655322111 1235555555555554334443No 78>3wv6_A Galectin-9; beta sandwich, carbohydrate-binding, oligosaccharide, sugar protein; HET: GAL BGC GLC; 1.95A {Homo sapiens} Probab=30.58 E-value=4.8e+02 Score=28.68 Aligned_cols=104 Identities=14% Similarity=0.106 Sum_probs=65.6 Q ss_pred ccCCchhhccCCCCc-ceEEEEEEeecCCCCceEEEEEcCCCCeEEEEEEEcccccCceeEEEEEeeccCCcceeEee-- Q FBpp0308936 72 DVKSPYRMLLPEKLY-EFAILITFRQSSLKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLAS-- 148 (1022) Q Consensus 72 ~l~~pt~~~fP~~~~-eFSilaT~R~~~~~~g~LfsV~~~~~~~~qlgl~l~~~~~~~~~i~L~Y~~~~~~~~~~~~s-- 148 (1022) .+..|+...+|.+|. .=+|+++=+.......+-+.+.... .+.|.++.+-. .+.|..-... ++.+.+.-.. T Consensus 163 ~~~vPf~~~lp~gl~~G~~i~I~G~~~~~~~~F~Inl~~~~----dialHfnpRf~-~~~iV~Ns~~-~g~Wg~Eer~~~ 236 (296) T 3wv6_A 163 AYPMPFITTILGGLYPSKSILLSGTVLPSAQSFHINLCSGN----HIAFHLNPRFD-ENAVVRNTQI-DNSWGSEERSLP 236 (296) T ss_dssp CCCSSEEEECTTCCCTTCEEEEEEEECTTCCBEEEEEEETT----EEEEEEEEETT-TTEEEEEEEE-TTEECCCBCCCS T ss_pred ccccCeeeeeCccccCCCEEEEEEEecCCCceEEEEecCCC----CEEEEEeEecC-CCEEEEeCcc-CCeeCccccccc Confidence 346788888888885 5555555555544445766776642 56677776622 2333333222 2333222112 Q ss_pred eecccCCCCeeEEEEEEeCCeEEEEEcCcccee Q FBpp0308936 149 FGVAHVPDKWNSIALQVLSDKVSFYYDCELRNT 181 (1022) Q Consensus 149 F~v~ladg~WHrlaLsV~g~~VtLyVDC~~~~t 181 (1022) -..+...|+--.|.|.+..+...++||-....+ T Consensus 237 ~~~PF~~G~~F~l~i~~~~~~f~V~vng~~~~~ 269 (296) T 3wv6_A 237 RKMPFVRGQSFSVWILCEAHCLKVAVDGQHLFE 269 (296) T ss_dssp SSCCCCTTCEEEEEEEECSSEEEEEETTEEEEE T ss_pred CCCCccCCCeEEEEEEECCCEEEEEECCEEEEE Confidence 235667889999999999999999999877754No 79>4bpz_A Endo-1,3-beta-glucanase, family GH16; hydrolase, marine laminarinase; HET: GLC BGC; 1.13A {Zobellia galactanivorans} PDB: 4bow_A* 4bq1_A Probab=30.26 E-value=5.9e+02 Score=27.06 Aligned_cols=32 Identities=9% Similarity=0.196 Sum_probs=27.5 Q ss_pred cccCCCCeeEEEEEEeCCeEEEEEcCccceee Q FBpp0308936 151 VAHVPDKWNSIALQVLSDKVSFYYDCELRNTT 182 (1022) Q Consensus 151 v~ladg~WHrlaLsV~g~~VtLyVDC~~~~t~ 182 (1022) +......||..+|....+.|++|||-+++.+. T Consensus 179 ~~~~~~~fH~Y~~eW~~~~I~~yvDg~~~~~~ 210 (256) T 4bpz_A 179 ITNASGSFHVYSLEWNASAMKVFLDDTLVYEL 210 (256) T ss_dssp CSCTTTSCEEEEEEECSSEEEEEETTEEEEEE T ss_pred cCCCCCCCEEEEEEEECCEEEEEECCeEEEEe Confidence 34456799999999999999999999887664No 80>3iln_A Laminarinase; jelly ROW, hydrolase, family 16 glycosyl hydrolase; 1.95A {Rhodothermus marinus} Probab=28.48 E-value=5e+02 Score=27.36 Aligned_cols=34 Identities=12% Similarity=0.238 Sum_probs=28.5 Q ss_pred eecccCCCCeeEEEEEEeCCeEEEEEcCccceee Q FBpp0308936 149 FGVAHVPDKWNSIALQVLSDKVSFYYDCELRNTT 182 (1022) Q Consensus 149 F~v~ladg~WHrlaLsV~g~~VtLyVDC~~~~t~ 182 (1022) +........||..+|....+.|++|||-+++.+. T Consensus 158 ~~~~~~~~~fH~Y~~eW~~~~I~~~vDg~~~~~~ 191 (251) T 3iln_A 158 IRVPTARTDFHVYAIEWTPEEIRWFVDDSLYYRF 191 (251) T ss_dssp EECTTTTTSCEEEEEEECSSEEEEEETTEEEEEE T ss_pred EeCCCCCCCCEEEEEEEECCEEEEEECCEEEEEE Confidence 3445557799999999999999999999887664No 81>2ayh_A 1,3-1,4-beta-D-glucan 4-glucanohydrolase; hydrolase (glucanase); 1.60A {Hybrid} SCOP: b.29.1.2 PDB: 1byh_A 1glh_A 1u0a_A* 1mac_A 1gbg_A Probab=28.01 E-value=4e+02 Score=27.43 Aligned_cols=28 Identities=18% Similarity=0.361 Sum_probs=25.5 Q ss_pred CCCeeEEEEEEeCCeEEEEEcCccceee Q FBpp0308936 155 PDKWNSIALQVLSDKVSFYYDCELRNTT 182 (1022) Q Consensus 155 dg~WHrlaLsV~g~~VtLyVDC~~~~t~ 182 (1022) ...||..+|....+.|++|||-+++.+. T Consensus 141 ~~~fH~Y~~~W~~~~i~~yvDg~~~~~~ 168 (214) T 2ayh_A 141 SKGFHTYAFDWQPGYIKWYVDGVLKHTA 168 (214) T ss_dssp GGSCEEEEEEEETTEEEEEETTEEEEEE T ss_pred cCCcEEEEEEEECCEEEEEECCEEEEEE Confidence 4689999999999999999999988774No 82>4jqt_A Putative glycosyl hydrolase; PF06439 family protein, DUF1080, structural genomics, joint for structural genomics, JCSG; HET: MSE; 2.49A {Bacteroides thetaiotaomicron} Probab=26.45 E-value=1e+02 Score=35.90 Aligned_cols=103 Identities=12% Similarity=0.128 Sum_probs=55.4 Q ss_pred ccCCCCc-ceEEEEEEeecC-CCCceEEEEEcCCC----CeEEEEEEEcccccCceeEEEE---EeeccCCcceeEeeee Q FBpp0308936 80 LLPEKLY-EFAILITFRQSS-LKGGYLFSVVNPLD----TVVQLGVHLSPVVKNSYNVSLV---YTQADQNIGRKLASFG 150 (1022) Q Consensus 80 ~fP~~~~-eFSilaT~R~~~-~~~g~LfsV~~~~~----~~~qlgl~l~~~~~~~~~i~L~---Y~~~~~~~~~~~~sF~ 150 (1022) ++...-+ +|.|.+-+|... .++|++|.+..... -..-++++|........ ..+- ....++.-....+.-. T Consensus 271 l~t~~~f~df~L~~e~k~~~~~NSGv~~~~~~~~~~~~~~~~g~E~Qild~~~~~~-~~~g~~~~~~~Gsly~~~~~~~~ 349 (431) T 4jqt_A 271 IVTTRKYKNFILTVDFKITEGANSGVKYFVNPDLNKGEGSAIGCEFQILDDDKHPD-AKLGVKGNRKLGSLYDLIPAPEK 349 (431) T ss_dssp EEESSCBCSEEEEEEEEECTTCEEEEEEEEETTTCCSSSCCEEEEEEEECTTTCGG-GGSSSTTTTSTTSBTTTBCCCSS T ss_pred EEECCccceEEEEEEEEcCCCCCceEEEEecCccccCCCCcceEEEEEeCCCCCCc-cccCCCCCcccceeccccccccc Confidence 4433335 999999999854 67788887765311 11234555543211000 0000 0000000000011100 Q ss_pred cccCCCCeeEEEEEEeCCeEEEEEcCccceeee Q FBpp0308936 151 VAHVPDKWNSIALQVLSDKVSFYYDCELRNTTL 183 (1022) Q Consensus 151 v~ladg~WHrlaLsV~g~~VtLyVDC~~~~t~~ 183 (1022) ..+-.++|+++-|.|.+++|++|||-.++.... T Consensus 350 ~~~kpgeWn~~~I~~~g~~i~v~lNG~~v~~~~ 382 (431) T 4jqt_A 350 KPFNKKDFNTATIIVQDNHVEHWLNGVKLIEYT 382 (431) T ss_dssp CCCCTTSCEEEEEEEETTEEEEEETTEEEEEEE T ss_pred cCCCCCCCeEEEEEEECCEEEEEECCEEEEEee Confidence 111239999999999999999999999887643No 83>1cpn_A Circularly permuted; hydrolase(glucanase); 1.80A {Paenibacillus macerans} SCOP: b.29.1.2 PDB: 1cpm_A Probab=25.77 E-value=6.3e+02 Score=25.98 Aligned_cols=70 Identities=16% Similarity=0.281 Sum_probs=45.1 Q ss_pred CCCeeEEEEEEeCCeEEEEEcCccceeee--ccCCCcceeccCCeeEEEEe-----cccc-cCCccccceeeeEEeeCcc Q FBpp0308936 155 PDKWNSIALQVLSDKVSFYYDCELRNTTL--VTREPIELVFDSASTLYIGQ-----AGSI-IGGKFEGYLEKINVYGNPD 226 (1022) Q Consensus 155 dg~WHrlaLsV~g~~VtLyVDC~~~~t~~--l~r~~~~l~~~~~~~l~iGq-----~g~~-~~~~F~G~LQ~L~i~~dp~ 226 (1022) ...||..+|....+.|++|||-+++.+.. ++..+..|.+ .|+++. .+.. ...-++-.|.-||++...+ T Consensus 83 ~~~fH~Y~~eW~~~~I~~yvDg~~~~~~~~~~p~~p~~iil----nl~~ggg~~~W~G~~~~~~p~~m~VDyVrvyq~~~ 158 (208) T 1cpn_A 83 SKGFHTYAFDWQPGYIKWYVDGVLKHTATANIPSTPGKIMM----NLWNGTGVDDWLGSYNGANPLYAEYDWVKYTSNGS 158 (208) T ss_dssp GGSCEEEEEEEETTEEEEEETTEEEEEECSSCCCSCBEEEE----EEEEBSSCHHHHCCCCCCCCEEEEEEEEEEEETTE T ss_pred CCCcEEEEEEEECCEEEEEECCEEEEEEcCCCCCCCcEEEE----EEEcCCCcccCCCCCCCCCCeEEEEEEEEEEECCC Confidence 46899999999999999999999887742 3332333322 344442 1110 1123566888899988766 Q ss_pred cc Q FBpp0308936 227 AI 228 (1022) Q Consensus 227 ~a 228 (1022) .. T Consensus 159 ~~ 160 (208) T 1cpn_A 159 VF 160 (208) T ss_dssp EE T ss_pred cc Confidence 53No 84>4qhz_A Putative glycosyl hydrolase; PF06439 family protein, DUF1080, structural genomics, joint for structural genomics, JCSG; HET: MLY; 2.13A {Parabacteroides distasonis} Probab=25.53 E-value=62 Score=34.95 Aligned_cols=91 Identities=12% Similarity=0.253 Sum_probs=52.0 Q ss_pred hhccCCCCc-ceEEEEEEeecC---------CCCceEEEEEcCCCCeEEEEEEEcccccCceeEEEEEeec-cCCc-cee Q FBpp0308936 78 RMLLPEKLY-EFAILITFRQSS---------LKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQA-DQNI-GRK 145 (1022) Q Consensus 78 ~~~fP~~~~-eFSilaT~R~~~---------~~~g~LfsV~~~~~~~~qlgl~l~~~~~~~~~i~L~Y~~~-~~~~-~~~ 145 (1022) ..|+...-+ +|.|.+-+|... .++|+.|.. +++++|...... . .|... .+.. ... T Consensus 86 G~L~T~~~f~dF~L~lE~k~~~~~~~~~~~~gNSGI~~r~--------~~EvQIld~~~~--~---~~~~~~~GslY~~~ 152 (246) T 4qhz_A 86 GDIQTXQXFNDFQMHIEWQVPTNITGESQSRGNSGIFLQG--------MYEVQVLDCYNN--P---TYVNGQTGSIYKQS 152 (246) T ss_dssp CCEEESSCBSSEEEEEEEECCTTCCCCGGGSSCEEEEETT--------TEEEEECCCTTC--C---CCGGGSTTCBTTTB T ss_pred ccEEeccccCcEEEEEEEEeCCcccccccCCCccEEEeCc--------eEEEEEeCCCCC--C---CCCCCceeEECccc Confidence 334444445 999999999864 567776531 145555443110 0 01110 0100 001 Q ss_pred EeeeecccCCCCeeEEEEEEe------------CCeEEEEEcCcccee Q FBpp0308936 146 LASFGVAHVPDKWNSIALQVL------------SDKVSFYYDCELRNT 181 (1022) Q Consensus 146 ~~sF~v~ladg~WHrlaLsV~------------g~~VtLyVDC~~~~t 181 (1022) .+.-+...-.++|+++-|.|. +.+|+++||-.++.. T Consensus 153 ~p~~~~~~p~GeWNt~~I~~~a~~f~~~G~~~~g~~itv~lNG~~V~~ 200 (246) T 4qhz_A 153 IPLANAMRXPGEWNVYDIIYTAPTFKEDGSYRTHPTVTVIQNGVVLQN 200 (246) T ss_dssp CCSCBCCCCTTSEEEEEEEEECCEECTTSSEEECCEEEEEETTEEEEE T ss_pred CCccccccCcCcceEEEEEEEecccccccccccCCEEEEEECCEEEEE Confidence 111122234689999999996 689999999999876No 85>1ajo_A CPA16M-127, circularly permuted (1-3,1-4)-beta-D-glucan 4- glucanohydrolase CPA16M-127; glucanase, circular permutation; 2.07A {Paenibacillus macerans} SCOP: b.29.1.2 Probab=25.39 E-value=1.6e+02 Score=30.81 Aligned_cols=76 Identities=14% Similarity=0.193 Sum_probs=46.2 Q ss_pred CCCeeEEEEEEeCCeEEEEEcCccceeee--ccCCCcceeccCCeeEEEEec-----cc-ccCCccccceeeeEEeeCcc Q FBpp0308936 155 PDKWNSIALQVLSDKVSFYYDCELRNTTL--VTREPIELVFDSASTLYIGQA-----GS-IIGGKFEGYLEKINVYGNPD 226 (1022) Q Consensus 155 dg~WHrlaLsV~g~~VtLyVDC~~~~t~~--l~r~~~~l~~~~~~~l~iGq~-----g~-~~~~~F~G~LQ~L~i~~dp~ 226 (1022) ...||..+|.-..+.|++|||-+++.+.. ++..+..|.+ .|+++.. +. ....-++-.|.-++++.... T Consensus 15 ~~~fH~Y~~eW~~~~i~~~vDg~~~~~~~~~~P~~p~~lil----nl~~g~g~~~W~g~~~~~~p~~m~vDyVrvy~~~~ 90 (214) T 1ajo_A 15 SKGFHTYAFDWQPGYIKWYVDGVLKHTATANIPSTPGKIMM----NLWNGTGVDDWLGSYNGANPLYAEYDWVKYTSNQT 90 (214) T ss_dssp GGSCEEEEEEEETTEEEEEETTEEEEEECSSCCCSCBEEEE----EEEEBSSCHHHHCCCCCCCCEEEEEEEEEEEESST T ss_pred cCCcEEEEEEEeCCeEEEEECCEEEEEEcCCCCCCCcEEEE----EEEecCCccccCCCCCcCCCceEEEEEEEEeeccc Confidence 56899999999999999999999987743 3332333322 3455510 10 00122345566778877664 Q ss_pred cccccCCC Q FBpp0308936 227 AINVTCMP 234 (1022) Q Consensus 227 ~a~~~C~~ 234 (1022) +....|+- T Consensus 91 ~~~~~ddF 98 (214) T 1ajo_A 91 GGSFFEPF 98 (214) T ss_dssp TCCEEECC T ss_pred cceeeccc Confidence 54445544No 86>1dyp_A Kappa-carrageenase; hydrolase, kappa-carrageenan double helix degradation; HET: MSE; 1.54A {Pseudoalteromonas carrageenovora} SCOP: b.29.1.2 Probab=25.23 E-value=1.7e+02 Score=31.52 Aligned_cols=29 Identities=21% Similarity=0.448 Sum_probs=26.1 Q ss_pred CCCeeEEEEEEeCCeEEEEEcCccceeee Q FBpp0308936 155 PDKWNSIALQVLSDKVSFYYDCELRNTTL 183 (1022) Q Consensus 155 dg~WHrlaLsV~g~~VtLyVDC~~~~t~~ 183 (1022) ...||..+|....+.|++|||-+++.+.. T Consensus 189 ~~~fH~Y~veW~~~~I~~yvDG~~~~~~~ 217 (271) T 1dyp_A 189 RNDFHTYGVNVTKDKITWYVDGEIVGEKD 217 (271) T ss_dssp TSSCEEEEEEECSSEEEEEETTEEEEEEE T ss_pred CCCeEEEEEEEECCEEEEEECCEEEeeec Confidence 57999999999999999999999887743No 87>2uwa_A Cellulase; glycoside hydrolase, xyloglucan-endo-transferase, hydrolase, glycosidase, family GH16, tropaeolum majus xyloglucanase; 1.8A {Tropaeolum majus} SCOP: b.29.1.0 PDB: 2uwc_A 2uwb_A 2vh9_A* Probab=24.28 E-value=7.9e+02 Score=26.56 Aligned_cols=75 Identities=12% Similarity=0.173 Sum_probs=46.7 Q ss_pred CCCeeEEEEEEeCCeEEEEEcCccceeee------ccCCCcceeccCCeeEEEEec-----cc--c--cCCccccceeee Q FBpp0308936 155 PDKWNSIALQVLSDKVSFYYDCELRNTTL------VTREPIELVFDSASTLYIGQA-----GS--I--IGGKFEGYLEKI 219 (1022) Q Consensus 155 dg~WHrlaLsV~g~~VtLyVDC~~~~t~~------l~r~~~~l~~~~~~~l~iGq~-----g~--~--~~~~F~G~LQ~L 219 (1022) ...||..+|.-..+.|++|||-+++.+.. ++..+..|. ..|++|.. +. + ...-|.-.|..| T Consensus 141 ~~~fHtY~ieWtp~~I~~yVDg~~v~~~~~~~~~~~P~~Pm~ii----lnlw~gg~Wa~~gG~~~~d~~~~P~~m~vd~V 216 (274) T 2uwa_A 141 TQDYHNYAIYWTPSEIIFFVDDVPIRRYPRKSDATFPLRPLWVY----GSVWDASSWATENGKYKADYRYQPFVGKYEDF 216 (274) T ss_dssp TSSCEEEEEEECSSEEEEEETTEEEEEEECCCGGGSCCSCEEEE----EEEEECTTTTBGGGTBCCCGGGCCEEEEEEEE T ss_pred CCCcEEEEEEEccCeEEEEECCEEEEEEccccccCCCCCccEEE----EeeEecCCccccCCccccCCccCCEEEEEEEE Confidence 57999999999999999999999886642 121121221 23444332 10 0 013367788999 Q ss_pred EEeeCcccccccCC Q FBpp0308936 220 NVYGNPDAINVTCM 233 (1022) Q Consensus 220 ~i~~dp~~a~~~C~ 233 (1022) ||+.-.......|. T Consensus 217 rV~~~~~~~~~~C~ 230 (274) T 2uwa_A 217 KLGSCTVEAASSCN 230 (274) T ss_dssp EEEEEETTSCTTCC T ss_pred EEEecCCCCCCCcC Confidence 99875544445564No 88>3h0o_A Beta-glucanase; 1,3-1,4-beta-D-glucanase, CH-PI stacking interactions, TRIS inhibition, hydrolase, glycosidase; 1.40A {Fibrobacter succinogenes} SCOP: b.29.1.2 PDB: 1mve_A 1zm1_A* 3hr9_A 2r49_A 3axd_A 3axe_A* Probab=24.21 E-value=7.3e+02 Score=26.18 Aligned_cols=29 Identities=14% Similarity=0.170 Sum_probs=26.1 Q ss_pred CCCCeeEEEEEEeCCeEEEEEcCccceee Q FBpp0308936 154 VPDKWNSIALQVLSDKVSFYYDCELRNTT 182 (1022) Q Consensus 154 adg~WHrlaLsV~g~~VtLyVDC~~~~t~ 182 (1022) ....||..+|.-..+.|++|||-+++.+. T Consensus 91 ~~~~fH~Y~ieW~~~~I~wyVDg~~~~t~ 119 (240) T 3h0o_A 91 ADQAFHTYGLEWTPNYVRWTVDGQEVRKT 119 (240) T ss_dssp TTTSCEEEEEEECSSCEEEEETTEEEEEE T ss_pred CCCCcEEEEEEEECCEEEEEECCEEEEEE Confidence 45799999999999999999999988764No 89>3o5s_A Beta-glucanase; glycosyl hydrolase, beta-jelly roll, hydrolase; HET: B3P; 2.20A {Bacillus subtilis} SCOP: b.29.1.2 PDB: 3d6e_A Probab=23.84 E-value=4.3e+02 Score=27.85 Aligned_cols=28 Identities=18% Similarity=0.488 Sum_probs=25.5 Q ss_pred CCCeeEEEEEEeCCeEEEEEcCccceee Q FBpp0308936 155 PDKWNSIALQVLSDKVSFYYDCELRNTT 182 (1022) Q Consensus 155 dg~WHrlaLsV~g~~VtLyVDC~~~~t~ 182 (1022) ...||..+|....+.|++|||-+++.+. T Consensus 165 ~~~fH~Y~~eW~~~~I~~yvDg~~~~~~ 192 (238) T 3o5s_A 165 ANAYHTYAFDWQPNSIKWYVDGQLKHTA 192 (238) T ss_dssp GGSCEEEEEEECSSCEEEEETTEEEEEE T ss_pred CCCCEEEEEEEECCEEEEEECCEEEEEE Confidence 5689999999999999999999988764No 90>1buu_A Protein (mannose-binding protein A); lectin, HOST defense, metalloprotein, sugar binding protein; 1.90A {Rattus norvegicus} SCOP: d.169.1.1 h.1.1.1 Probab=22.96 E-value=21 Score=35.39 Aligned_cols=8 Identities=13% Similarity=0.252 Sum_probs=4.3 Q ss_pred hhhHHHHH Q FBpp0308936 834 GADFACYR 841 (1022) Q Consensus 834 GAD~~C~~ 841 (1022) -|..+|++ T Consensus 70 ~A~~~C~~ 77 (168) T 1buu_A 70 KVKALCSE 77 (168) T ss_dssp HHHHHHHH T ss_pred HHHHHHHH Confidence 35666653No 91>1umz_A Xyloglucan endotransglycosylase; glycoside hydrolase, XET, XTH, XEH, transglycosylation, transferase, glycosyltransferase; HET: NAG BMA BGC GAL; 1.8A {Populus tremula} SCOP: b.29.1.2 PDB: 1un1_A* Probab=22.63 E-value=8.6e+02 Score=26.41 Aligned_cols=28 Identities=7% Similarity=-0.056 Sum_probs=25.4 Q ss_pred CCCeeEEEEEEeCCeEEEEEcCccceee Q FBpp0308936 155 PDKWNSIALQVLSDKVSFYYDCELRNTT 182 (1022) Q Consensus 155 dg~WHrlaLsV~g~~VtLyVDC~~~~t~ 182 (1022) ...||..+|.-..+.|++|||-+++.+. T Consensus 130 ~~~fHtY~ieWtp~~I~~yVDG~~v~~~ 157 (278) T 1umz_A 130 TKEFHYYSVLWNMYMIVFLVDDVPIRVF 157 (278) T ss_dssp TTSCEEEEEEECSSEEEEEETTEEEEEE T ss_pred CCCCEEEEEEEeCCeEEEEECCEEEEEE Confidence 5799999999999999999999988664