Query FBpp0308937 type=protein; loc=3L:join(7012190..7012289,7012739..7013277,7033869..7033964,7034972..7035038,7035170..7035315,7035744..7035881,7038005..7038151,7041018..7041131,7043466..7043720,7044926..7045003,7045109..7045355,7046334..7046488,7046586..7046678,7048842..7048964,7050565..7050695,7051242..7051421,7051486..7051722,7051977..7052052); ID=FBpp0308937; name=Mp-PU; parent=FBgn0260660,FBtr0339905; dbxref=GB_protein:AHN57987,REFSEQ:NP_001286962,FlyBase:FBpp0308937,FlyBase_Annotation_IDs:CG42543-PU; MD5=27e96745b80e96e124d1411d4ea214e9; length=973; release=r6.06; species=Dmel; Match_columns 973 No_of_seqs 680 out of 2743 Neff 6.4 Searched_HMMs 35384 No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 1dy2_A Collagen alpha1(XV) cha 100.0 3E-63 8.6E-68 492.8 12.5 174 759-936 2-176 (180) 2 1koe_A Endostatin; angiogenesi 100.0 2.1E-62 5.9E-67 491.9 10.7 170 764-933 1-171 (172) 3 2uur_A Collagen alpha-1(IX) ch 100.0 1.5E-32 4.2E-37 295.8 19.0 195 34-238 29-235 (245) 4 3hqv_A Collagen alpha-1(I) cha 100.0 5.6E-29 1.6E-33 311.5 39.9 32 618-649 997-1028(1056) 5 3hqv_A Collagen alpha-1(I) cha 100.0 7.3E-29 2.1E-33 310.5 40.5 32 619-650 995-1026(1056) 6 3hqv_B Collagen alpha-2(I) cha 100.0 7.5E-29 2.1E-33 309.7 39.2 7 641-647 1015-1021(1028) 7 2erf_A Thrombospondin-1; TSP-1 100.0 1.3E-30 3.7E-35 274.3 17.3 194 34-234 2-209 (209) 8 3hqv_B Collagen alpha-2(I) cha 100.0 2.4E-28 6.7E-33 305.2 39.3 7 640-646 1017-1023(1028) 9 1za4_A Thrombospondin 1; TSP-1 100.0 2E-29 5.7E-34 272.4 18.0 195 34-237 12-222 (251) 10 3hsh_A Endostatin, collagen al 99.6 5.6E-16 1.6E-20 127.1 4.9 52 682-733 4-55 (56) 11 3n3f_A Collagen alpha-1(XV) ch 99.6 8.7E-16 2.4E-20 125.2 5.6 52 682-733 2-53 (54) 12 3sh4_A LG3 peptide; actin disa 98.8 1.2E-07 3.3E-12 97.6 16.5 149 63-223 6-167 (195) 13 3v64_A Low-density lipoprotein 98.8 1.5E-07 4.2E-12 96.5 16.3 128 87-225 36-172 (191) 14 3pve_A Agrin, AGRN protein; mR 98.7 6.9E-07 2E-11 91.5 17.4 150 64-224 11-170 (189) 15 1pz7_A Agrin; structural prote 98.7 4.7E-07 1.3E-11 94.0 16.2 126 87-223 49-183 (204) 16 4pbp_A C-reactive protein; acu 98.6 5.5E-07 1.6E-11 93.3 15.7 153 62-230 9-174 (210) 17 3flp_A SAP-like pentraxin; phy 98.6 1.3E-06 3.7E-11 90.8 17.4 160 62-230 6-177 (217) 18 2h0b_A Neurexin-1-alpha; B-san 98.5 1.8E-06 5.2E-11 87.9 15.9 127 87-225 29-163 (184) 19 4avs_A Serum amyloid P-compone 98.5 2.5E-06 7E-11 88.1 16.0 131 85-230 30-168 (204) 20 2r16_A Neurexin-1-alpha; beta- 98.5 2.7E-06 7.5E-11 86.8 15.7 125 87-224 28-157 (182) 21 3bod_A Neurexin-1-alpha; neure 98.5 3.5E-06 9.9E-11 85.8 16.0 124 87-223 30-155 (178) 22 3pvn_A C-reactive protein; pen 98.4 3.2E-06 8.9E-11 87.3 15.4 131 85-230 30-170 (206) 23 3asi_A Neurexin-1-alpha; beta- 98.3 1.1E-05 3E-10 93.0 15.8 127 87-225 250-377 (410) 24 4c1w_A Neuraminidase; sugar bi 98.2 1.4E-05 3.9E-10 81.7 14.5 137 86-229 33-182 (188) 25 2v73_A CBM40, putative EXO-alp 98.2 4.3E-05 1.2E-09 79.0 17.4 138 85-230 39-182 (191) 26 1d2s_A SHBG, sex hormone-bindi 98.1 3.6E-05 1E-09 77.7 14.3 122 87-224 27-156 (170) 27 2r1d_A Neurexin-1-beta, neurex 98.1 5.5E-05 1.5E-09 80.4 15.7 125 87-224 64-190 (226) 28 2jd4_A Laminin subunit alpha-1 98.1 4.9E-05 1.4E-09 86.5 15.9 126 87-225 221-357 (383) 29 1f5f_A SHBG, sex hormone-bindi 98.0 7.1E-05 2E-09 78.0 14.1 128 87-225 39-175 (205) 30 1dyk_A Laminin alpha 2 chain; 98.0 8.4E-05 2.4E-09 84.9 15.6 126 87-225 233-369 (394) 31 2r1b_A Neurexin-1-beta, neurex 98.0 0.00012 3.5E-09 77.2 15.4 126 87-223 36-191 (220) 32 4qvs_A S-layer domain-containi 97.9 2E-05 5.8E-10 82.1 8.9 166 53-230 38-215 (227) 33 1h30_A GAS6, growth-arrest-spe 97.5 0.0013 3.6E-08 75.9 16.0 126 87-222 62-195 (422) 34 2jd4_A Laminin subunit alpha-1 97.5 0.0021 6E-08 73.0 17.1 125 87-223 44-176 (383) 35 4dqa_A Uncharacterized protein 97.4 0.0019 5.5E-08 73.0 15.5 152 62-230 140-297 (355) 36 2wjs_A Laminin subunit alpha-2 97.4 0.0018 5.2E-08 78.3 15.1 124 87-223 408-540 (608) 37 1dyk_A Laminin alpha 2 chain; 97.3 0.0031 8.8E-08 71.9 15.9 126 87-225 58-191 (394) 38 2jkb_A Sialidase B; intramolec 97.3 0.0025 7.2E-08 78.4 15.1 162 62-231 34-209 (686) 39 1a8d_A Tetanus neurotoxin; clo 97.2 0.011 3E-07 69.2 19.0 167 51-230 47-237 (452) 40 1h30_A GAS6, growth-arrest-spe 97.1 0.0022 6.3E-08 73.9 12.0 128 87-222 250-393 (422) 41 2vu9_A Botulinum neurotoxin A 97.0 0.015 4.3E-07 66.2 17.0 167 50-230 48-230 (444) 42 3vuo_A NTNHA; protection of bo 96.8 0.019 5.5E-07 72.0 16.9 155 52-229 865-1026(1196) 43 2wjs_A Laminin subunit alpha-2 96.8 0.019 5.5E-07 69.4 16.3 126 87-222 226-363 (608) 44 3v0a_B NTNH; botulinum neuroto 96.7 0.022 6.1E-07 71.5 16.1 156 52-230 868-1030(1196) 45 3pme_A Type C neurotoxin; stru 96.7 0.034 9.5E-07 63.2 15.8 166 51-230 31-209 (420) 46 3asi_A Neurexin-1-alpha; beta- 96.6 0.014 3.9E-07 67.1 12.8 122 87-223 27-161 (410) 47 3n7l_A Neurotoxin; HCR/D-SA, g 96.6 0.017 4.8E-07 66.7 13.1 165 51-230 32-219 (424) 48 3qcw_A Neurexin-1-alpha; synap 96.6 0.023 6.5E-07 74.6 16.1 122 89-222 1084-1206(1245) 49 3rsj_A BONT/F; clostridium bot 96.4 0.15 4.2E-06 57.6 18.6 163 51-230 30-211 (413) 50 1epw_A Bontoxilysin B, botulin 96.2 0.13 3.6E-06 65.5 18.5 155 61-230 894-1069(1290) 51 2nyy_A Botulinum neurotoxin ty 96.1 0.12 3.5E-06 64.8 17.7 166 51-230 901-1082(1295) 52 2sli_A Intramolecular trans-si 95.8 0.12 3.5E-06 63.5 16.1 136 85-228 34-184 (679) 53 2vxr_A Botulinum neurotoxin ty 95.5 0.25 7E-06 56.3 15.5 163 51-230 77-261 (482) 54 3qcw_A Neurexin-1-alpha; synap 95.4 0.11 3.1E-06 68.3 14.5 121 87-222 859-992 (1245) 55 3ffz_A Botulinum neurotoxin ty 93.6 1.7 4.8E-05 54.9 17.4 162 52-230 877-1058(1252) 56 4b1m_A Levanase; hydrolase, CB 91.6 0.93 2.6E-05 46.1 10.1 90 86-182 64-157 (185) 57 1ei8_A Collagen-like peptide ( 89.3 0.58 1.6E-05 33.5 4.3 8 291-298 17-24 (29) 58 1ms9_A Trans-sialidase; trans- 88.3 6.1 0.00017 48.3 15.1 128 87-229 495-629 (648) 59 1pwb_A SP-D, PSP-D, pulmonary 86.4 0.17 4.7E-06 50.5 0.0 11 919-929 165-175 (177) 60 4ccd_A Galactocerebrosidase; h 85.9 5.8 0.00016 48.6 13.2 89 87-182 528-622 (654) 61 1pwb_A SP-D, PSP-D, pulmonary 74.5 0.76 2.1E-05 45.6 0.0 7 874-880 112-118 (177) 62 2zzj_A Glucuronan lyase A; bet 71.3 74 0.0021 33.8 14.5 127 51-182 22-180 (238) 63 4le3_A Beta-glucanase; GH131, 68.6 29 0.00082 37.4 10.4 66 99-176 111-182 (252) 64 3w9a_A CCGH131A, putative unch 62.0 33 0.00092 36.8 9.2 77 87-176 93-176 (245) 65 2dpr_A Conantokin-T, CON-T; co 59.4 4.9 0.00014 25.7 1.4 12 961-972 2-13 (21) 66 3zyp_A CIP1; metal binding pro 54.5 57 0.0016 34.4 9.5 116 59-182 36-163 (218) 67 3wvj_A Beta-glucanase; thermos 49.7 2.7E+02 0.0075 28.8 14.0 65 155-223 143-215 (220) 68 1buu_A Protein (mannose-bindin 47.4 4.8 0.00014 39.9 0.0 12 918-929 153-164 (168) 69 1umz_A Xyloglucan endotransgly 45.8 3.6E+02 0.01 29.2 16.2 67 155-225 130-214 (278) 70 1cpn_A Circularly permuted; hy 43.7 3.1E+02 0.0088 28.1 13.1 69 155-227 83-159 (208) 71 2uwa_A Cellulase; glycoside hy 42.6 4E+02 0.011 28.7 15.7 75 155-233 141-230 (274) 72 3i4i_A 1,3-1,4-beta-glucanase; 41.7 3.7E+02 0.01 28.1 14.1 66 154-223 160-233 (234) 73 2ayh_A 1,3-1,4-beta-D-glucan 4 38.3 3.8E+02 0.011 27.4 13.4 65 155-223 141-213 (214) 74 3o5s_A Beta-glucanase; glycosy 36.9 4.2E+02 0.012 27.7 13.1 28 155-182 165-192 (238) 75 1axk_A Gluxyn-1; bifunctional, 35.8 4E+02 0.011 30.5 13.4 68 155-226 83-158 (394) 76 3s5q_A Putative glycosylhydrol 32.1 50 0.0014 34.5 4.8 28 155-182 132-159 (214) 77 3i8t_A Galectin-4; S-type lect 31.9 4.4E+02 0.013 26.2 11.8 119 61-181 11-135 (164) 78 1o91_A Collagen alpha 1(VIII) 31.5 12 0.00034 38.1 0.0 6 802-807 169-174 (178) 79 1dyp_A Kappa-carrageenase; hyd 30.5 97 0.0027 33.2 6.9 29 155-183 189-217 (271) 80 1o91_A Collagen alpha 1(VIII) 29.1 14 0.0004 37.6 0.0 55 832-892 70-125 (178) 81 1ajk_A CPA16M-84, circularly p 28.8 1.4E+02 0.004 31.1 7.6 68 155-226 58-133 (214) 82 1ajo_A CPA16M-127, circularly 28.0 1.2E+02 0.0035 31.5 7.0 67 155-225 15-89 (214) 83 3h0o_A Beta-glucanase; 1,3-1,4 24.6 7E+02 0.02 26.1 12.2 70 154-227 91-171 (240) 84 3iln_A Laminarinase; jelly ROW 22.6 6.6E+02 0.019 26.2 11.6 34 149-182 158-191 (251) 85 1buu_A Protein (mannose-bindin 21.5 24 0.00067 34.8 0.0 6 786-791 71-76 (168)No 1>1dy2_A Collagen alpha1(XV) chain; angiogenesis inhibitor; 2.0A {Mus musculus} SCOP: d.169.1.5 Probab=100.00 E-value=3e-63 Score=492.75 Aligned_cols=174 Identities=52% Similarity=0.979 Sum_probs=164.4 Q ss_pred CCCCCCCceEEEEccCCCCCCCCCcccchhhhHHHhhhcCCCCceeEEEeccccCcccccCCCCC-CCccccCCCcEEec Q FBpp0308937 759 PPLLNTPTLRVAALNEPSTGDLQGIRGADFACYRQGRRAGLLGTFKAFLSSRVQNLDTIVRPADR-DLPVVNTRGDVLFN 837 (973) Q Consensus 759 ~~~~~~~~l~l~a~~~~~~g~~~Gi~GaD~~C~~~a~~~g~~gt~rA~Ls~~~~~~~~~v~~~dr-~~p~~n~~g~vl~~ 837 (973) |....+|+|||||||+|++|||+ ||++||+||+++|++|||||||||++||+++||+++|| ++||||+||+|||+ T Consensus 2 ~~~~~~~~L~lvALN~P~sG~m~----AD~~C~~qAraaGl~gTfRAfLSs~~qdl~~iV~~~DR~~~PivNlkGevLf~ 77 (180) T 1dy2_A 2 PLAYERPVLHLVALNTPVAGDIR----ADFQCFQQARAAGLLSTFRAFLSSHLQDLSTVVRKAERFGLPIVNLKGQVLFN 77 (180) T ss_dssp -----CCCEEEEECSSCBCSBCC----HHHHHHHHHHHTTCCSCEEESSCBTTBCGGGSSCGGGSSSCCEECTTSCEEES T ss_pred CccCCCccEEEEEcCCCCCCCch----HHHHHHHHHHHhCCCCceEEEeecccccCccccCHhHcCCCCeEcCCCCEEec Confidence 34557899999999999999999 99999999999999999999999999999999999999 79999999999999 Q ss_pred CccccccCCCCcccCCCceeecCCCccCCCCCCCcceEEeeCCCCccccccccccccccCCCCceeecccCCcccccccc Q FBpp0308937 838 SWKGIFNGQGGFFSQAPRIYSFSGKNVMTDSTWPMKMVWHGSLPNGERSMDTYCDAWHSGDHLKGSFASNLDGHKLLEQK 917 (973) Q Consensus 838 ~~~~l~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~k~vw~Gs~~~g~~~~~~~C~~W~s~~~~~~g~as~~~~~~~~~~~ 917 (973) ||++||++++++|+.+.+||+||+||||+|++||||+|||||++||++.+++||++|||++.+++|+||+|.+++||.|+ T Consensus 78 sw~~lf~g~~~~l~~~~~Iysfdg~dVl~d~~wP~K~vWhGS~~~G~r~~d~~C~~W~s~~~~~~G~Assl~~g~ll~q~ 157 (180) T 1dy2_A 78 NWDSIFSGDGGQFNTHIPIYSFDGRDVMTDPSWPQKVVWHGSNPHGVRLVDKYCEAWRTTDMAVTGFASPLSTGKILDQK 157 (180) T ss_dssp CSGGGGSSSCCBCCTTSCCBBTTSCBTTTCTTCSSCEEECCBCTTSCBCTTSBHHHHBCCCTTCEEEEEEGGGTBSSCCE T ss_pred CHHHHhCCCCCccCCCCCeeccCCcccccCCCccccccccCCCCCCCCcccccccCCccCCCCceEeeeecCCCCcccCc Confidence 99999999988999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred ccccCCCceEEEEeccchh Q FBpp0308937 918 RQSCDSKLIILCVEALSQD 936 (973) Q Consensus 918 ~~~C~~~~~~lCve~~~~~ 936 (973) .+||+++||||||||+... T Consensus 158 ~~sC~~~~ivLCIEn~~~~ 176 (180) T 1dy2_A 158 AYSCANRLIVLCIENSFMT 176 (180) T ss_dssp EEETTSCBBCEEEECCC-- T ss_pred ccCCCCceEEEEEEccccc Confidence 9999999999999998653No 2>1koe_A Endostatin; angiogenesis inhibitor, collagen XVIII, non-collageneous domain, heparin-binding domain; 1.50A {Mus musculus} SCOP: d.169.1.5 PDB: 1dy0_A 1dy1_A 1bnl_A Probab=100.00 E-value=2.1e-62 Score=491.91 Aligned_cols=170 Identities=48% Similarity=0.921 Sum_probs=166.6 Q ss_pred CCceEEEEccCCCCCCCCCcccchhhhHHHhhhcCCCCceeEEEeccccCcccccCCCCC-CCccccCCCcEEecCcccc Q FBpp0308937 764 TPTLRVAALNEPSTGDLQGIRGADFACYRQGRRAGLLGTFKAFLSSRVQNLDTIVRPADR-DLPVVNTRGDVLFNSWKGI 842 (973) Q Consensus 764 ~~~l~l~a~~~~~~g~~~Gi~GaD~~C~~~a~~~g~~gt~rA~Ls~~~~~~~~~v~~~dr-~~p~~n~~g~vl~~~~~~l 842 (973) +|+|||||||+||+|||+||+|||++||+||+++|++||||||||+++||+++||+++|| ++||||+||||||+||+|| T Consensus 1 ~~~l~lvaln~p~~GnlgGi~GAD~~C~~~A~aaGl~gtfRAfLSs~~q~~~~iV~~~dr~~~P~vN~kg~vl~~~~~~l 80 (172) T 1koe_A 1 QPVLHLVALNTPLSGGMRGIRGADFQCFQQARAVGLSGTFRAFLSSRLQDLYSIVRRADRGSVPIVNLKDEVLSPSWDSL 80 (172) T ss_dssp CCCEEEEECSSCBCSCSSHHHHHHHHHHHHHHHTTCCSCEEESCCBTTBCGGGGSCGGGTTTCCEECTTCCEEESCHHHH T ss_pred CCceEEEEeCCCcCCCcccchhHHHHHHHHHHhcCCCCeeEEEEEcccCCccceeccccccCCCeECCcCcEEeCCHHHh Confidence 478999999999999999999999999999999999999999999999999999999999 7999999999999999999 Q ss_pred ccCCCCcccCCCceeecCCCccCCCCCCCcceEEeeCCCCccccccccccccccCCCCceeecccCCccccccccccccC Q FBpp0308937 843 FNGQGGFFSQAPRIYSFSGKNVMTDSTWPMKMVWHGSLPNGERSMDTYCDAWHSGDHLKGSFASNLDGHKLLEQKRQSCD 922 (973) Q Consensus 843 ~~~~~~~~~~~~~i~~f~~~~~~~~~~~~~k~vw~Gs~~~g~~~~~~~C~~W~s~~~~~~g~as~~~~~~~~~~~~~~C~ 922 (973) |++++++|+++..||+||+||||+|++||+|+|||||++||+|..++||++|||++.+++|+||+|++++||+|+.++|+ T Consensus 81 ~~~~~~~~~~~~~i~sfn~~dvl~d~~wp~k~vWtGs~~~G~~~~~~~C~~Wts~~~~~~G~assl~~~~ll~q~~~sCs 160 (172) T 1koe_A 81 FSGSQGQLQPGARIFSFDGRDVLRHPAWPQKSVWHGSDPSGRRLMESYCETWRTETTGATGQASSLLSGRLLEQKAASCH 160 (172) T ss_dssp TSSSCSBCCTTCCCBBTTSCBTTTCTTSSSCEEECCBCTTSCBCTTSBHHHHTCCCTTCEEEEEEGGGTBSCCCEEEETT T ss_pred cCCCCccccCCCceEccCCCccccCCCCccceeEECCCCCCcCcCCCcccCCcCCCCCceEeeccCCCCCcccCcCCCcC Confidence 99999999999999999999999999999999999999999998899999999999999999999999999999999999 Q ss_pred CCceEEEEecc Q FBpp0308937 923 SKLIILCVEAL 933 (973) Q Consensus 923 ~~~~~lCve~~ 933 (973) ++|+||||||+ T Consensus 161 ~~~~vLCIE~~ 171 (172) T 1koe_A 161 NSYIVLCIENS 171 (172) T ss_dssp SCBBCEEEECC T ss_pred CCcEEEEEeec Confidence 99999999996No 3>2uur_A Collagen alpha-1(IX) chain; glycoprotein, hydroxylation, structural protein, NC4, collagen IX, polymorphism, extracellular matrix; 1.8A {Homo sapiens} Probab=100.00 E-value=1.5e-32 Score=295.85 Aligned_cols=195 Identities=18% Similarity=0.273 Sum_probs=165.5 Q ss_pred chhhccchhhhccCC---CCCceEEeccCCC-CcceEecCCcccCCcchhccccccc-ceEEEEEeeccCCCC---ceEE Q FBpp0308937 34 DALAEYTLTDIMNNN---QFAGIEFGEAEDG-FPAFRFLQTADVKSPYRMLLPEKLY-EFAILITFRQSSLKG---GYLF 105 (973) Q Consensus 34 D~l~~~dL~~l~~~~---~~~GV~~v~G~d~-~pAy~f~~~a~l~~pt~~lfp~~~~-eFSllaT~R~~~~~~---g~Lf 105 (973) |.++.|||+++++++ .+.||++++|.+. ++||+|.+.+++.+|++++||.+|+ ||||++|||+.+.+. |+|| T Consensus 29 ~~~~~~Dll~~l~l~~~~~~~gv~~v~G~~~~~~ay~~~~~a~l~~pt~~~fP~~lp~eFsi~~tlr~~~~~~~~~~~Lf 108 (245) T 2uur_A 29 DDLPGFDLISQFQVDKAASRRAIQRVVGSATLQVAYKLGNNVDFRIPTRNLYPSGLPEEYSFLTTFRMTGSTLKKNWNIW 108 (245) T ss_dssp -CCCEEEHHHHTTHHHHHTTTSSCEEECSSTTCEEEEECSSCCCEEEHHHHCTTCCCSSEEEEEEEECCGGGGGCEEEEE T ss_pred CCCCCcceeHhhCCCCcCCCCCeeEccCCCCCccEEEECCCcccCcchHHhccccCCCCEEEEEEEEccCCCCCCceEEE Confidence 556777777777766 4789999999765 8999999999999999999999998 999999999865443 5999 Q ss_pred EEEcCCCCeEEEEEEEcccccCceeEEEEEEecccccceeeeeeec--ccCCCceEEEEEEEecCeEEEEEccccceeee Q FBpp0308937 106 SVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLASFGV--AHVPDKWNSIALQVLSDKVSFYYDCELRNTTL 183 (973) Q Consensus 106 sI~~~~~~~~qlgl~lsg~~~~~~~i~L~Y~~~~~~~~q~~~sF~v--~l~dg~WHrlaLsV~g~~VtLyVDC~~~~t~~ 183 (973) +|++. ++.+||+|++++.+ +.+.|+|++.++.. +.++|.. +++|++||||+|+|++++|+|||||+++.++. T Consensus 109 si~~~-~~~~qlgl~l~~~~---~~v~~~y~~~~G~~--~~~~F~~~~~l~dg~WH~lalsV~~~~VtLyvDC~~~~~~~ 182 (245) T 2uur_A 109 QIQDS-SGKEQVGIKINGQT---QSVVFSYKGLDGSL--QTAAFSNLSSLFDSQWHKIMIGVERSSATLFVDCNRIESLP 182 (245) T ss_dssp EEECT-TSCEEEEEEEEGGG---TEEEEEEEBTTSCE--EEEEECCCGGGCSSSCEEEEEEEETTEEEEEETTEEEEEEE T ss_pred EEEcC-CCCEEEEEEEcCCC---CEEEEEEECCCCCE--EEEEECCCCccCCCCEEEEEEEEECCEEEEEEeCCcCcccc Confidence 99997 68999999999862 36999999876543 6789965 99999999999999999999999999999998 Q ss_pred eecCCcccccCCCceEEEeecccccCC-ccccceEeEEEecCCccc-ccccCCCCCC Q FBpp0308937 184 VTREPIELVFDSASTLYIGQAGSIIGG-KFEGYLEKINVYGNPDAI-NVTCMPPPKA 238 (973) Q Consensus 184 l~r~~~~l~~~~~~~l~IGq~g~~~~~-~F~G~LQ~Lri~~dP~~~-~~~C~e~p~~ 238 (973) +.+. .. ++.++.++||++.. .++ .|+|+||+|+|+|||+++ +++|++++.. T Consensus 183 l~~~-~~--l~~~g~~~lG~~~~-~~~~~f~G~lQ~l~i~~~p~~a~~~~C~e~~~~ 235 (245) T 2uur_A 183 IKPR-GP--IDIDGFAVLGKLAD-NPQVSVPFELQWMLIHCDPLRPRRETCHELPAR 235 (245) T ss_dssp CCCB-CC--CCCSSEEEEEEESS-CTTCBCCEEEEEEEEESCTTGGGGCCCTTCC-- T ss_pred ccCC-Cc--cCcCCEEEEEeccC-CCCCeEEEEEEEEEEEcCCCchhhCccccCCCC Confidence 8764 33 35668999999964 444 899999999999999998 8899999743No 4>3hqv_A Collagen alpha-1(I) chain; native, in SITU, molecular envelope, triple-helical, supermolecular, supramolecular, packing structure; 5.16A {Rattus norvegicus} SCOP: i.25.1.1 PDB: 3hr2_A Probab=99.97 E-value=5.6e-29 Score=311.51 Aligned_cols=32 Identities=44% Similarity=0.767 Sum_probs=14.3 Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC Q FBpp0308937 618 SGPKGEPGVDSRSSFFGDASYYGRPEPPRQPG 649 (973) Q Consensus 618 ~G~~G~~G~~g~~~~~g~~~~~g~pgppg~~g 649 (973) +|+.|++|..+.++..|..+.+|.+++++.++ T Consensus 997 ~G~~G~~G~~G~~G~~G~~G~~G~pGppGpPG 1028 (1056) T 3hqv_A 997 PGPIGPPGPRGRTGDSGPAGPPGPPGPPGPPG 1028 (1056) T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC Confidence 34444444444444444444444444444444No 5>3hqv_A Collagen alpha-1(I) chain; native, in SITU, molecular envelope, triple-helical, supermolecular, supramolecular, packing structure; 5.16A {Rattus norvegicus} SCOP: i.25.1.1 PDB: 3hr2_A Probab=99.97 E-value=7.3e-29 Score=310.49 Aligned_cols=32 Identities=34% Similarity=0.550 Sum_probs=12.7 Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC Q FBpp0308937 619 GPKGEPGVDSRSSFFGDASYYGRPEPPRQPGH 650 (973) Q Consensus 619 G~~G~~G~~g~~~~~g~~~~~g~pgppg~~g~ 650 (973) |..|++|..+..+..|..+..+.++++++++. T Consensus 995 G~~G~~G~~G~~G~~G~~G~~G~~G~pGppGp 1026 (1056) T 3hqv_A 995 GLPGPIGPPGPRGRTGDSGPAGPPGPPGPPGP 1026 (1056) T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC Confidence 33333333333333333334444444444443No 6>3hqv_B Collagen alpha-2(I) chain; native, in SITU, molecular envelope, triple-helical, supermolecular, supramolecular, packing structure; 5.16A {Rattus norvegicus} SCOP: i.25.1.1 PDB: 3hr2_B Probab=99.97 E-value=7.5e-29 Score=309.68 Aligned_cols=7 Identities=43% Similarity=0.947 Sum_probs=2.5 Q ss_pred CCCCCCC Q FBpp0308937 641 RPEPPRQ 647 (973) Q Consensus 641 ~pgppg~ 647 (973) .+++|+. T Consensus 1015 ~pGppGp 1021 (1028) T 3hqv_B 1015 PPGPPGP 1021 (1028) T ss_pred CCCCCCC Confidence 3333333No 7>2erf_A Thrombospondin-1; TSP-1, N-terminal TSPN, HBD, sugar binding protein; 1.45A {Homo sapiens} SCOP: b.29.1.4 PDB: 2es3_A 1z78_A Probab=99.97 E-value=1.3e-30 Score=274.29 Aligned_cols=194 Identities=15% Similarity=0.186 Sum_probs=159.8 Q ss_pred chhhccchhhhccCCC-CCceEEeccCCC-CcceEecCCcccCCcchhccccc-----cc-ceEEEEEeeccCCCCceEE Q FBpp0308937 34 DALAEYTLTDIMNNNQ-FAGIEFGEAEDG-FPAFRFLQTADVKSPYRMLLPEK-----LY-EFAILITFRQSSLKGGYLF 105 (973) Q Consensus 34 D~l~~~dL~~l~~~~~-~~GV~~v~G~d~-~pAy~f~~~a~l~~pt~~lfp~~-----~~-eFSllaT~R~~~~~~g~Lf 105 (973) |+++.|||+++++++. +.||++++|.+. ++||+|.+.+++.++++++||+. |+ ||+|++|||+.+++.++|| T Consensus 2 ~d~~~~Dll~~~~l~~~~~gv~~~~G~~~~~~ay~~~~~a~l~~~t~~~~P~~~~~l~~~~~Fsi~~tlr~~~~~~~~L~ 81 (209) T 2erf_A 2 GDNSVFDIFELTGAARKGSGRRLVKGPDPSSPAFRIEDANLIPPVPDDKFQDLVDAVRTEKGFLLLASLRQMKKTRGTLL 81 (209) T ss_dssp CTTCEEEHHHHHTTTTSCSSEEEECCSSTTSCEEEESCGGGSCCCCHHHHHHHHHHHHHHTEEEEEEEEEECTTCEEEEE T ss_pred CCcceeeehhhhCCCCccCceEEeeCCCCCccEEEEecccccccCchHhccchhhhhcCCCcEEEEEEEEeCCCCCeEEE Confidence 5678889999888887 789999999887 99999999999999999999998 77 9999999999999999999 Q ss_pred EEEcCCCCeEEEEEEEcccccCceeEEEEEEecccccceeeeee-ecccCCCceEEEEEEEecCeEEEEEccccceeeee Q FBpp0308937 106 SVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLASF-GVAHVPDKWNSIALQVLSDKVSFYYDCELRNTTLV 184 (973) Q Consensus 106 sI~~~~~~~~qlgl~lsg~~~~~~~i~L~Y~~~~~~~~q~~~sF-~v~l~dg~WHrlaLsV~g~~VtLyVDC~~~~t~~l 184 (973) +|++.....+||+|++++.. +++.|+|++.+ .+++++| .++++|++||||+|+|++++|+|||||+++.++.+ T Consensus 82 si~~~~~~~~~lgl~l~~~~---~~l~~~y~~~g---~~~~~~f~~~~l~dg~WH~lal~V~~~~V~LyvDC~~~~~~~l 155 (209) T 2erf_A 82 ALERKDHSGQVFSVVSNGKA---GTLDLSLTVQG---KQHVVSVEEALLATGQWKSITLFVQEDRAQLYIDCEKMENAEL 155 (209) T ss_dssp EEEETTSSCEEEEEEEETTT---TEEEEEEEETT---EEEEEEESSCCCCSSSEEEEEEEEETTEEEEEETTTEEEEEEC T ss_pred EEECCCCCEEEEEEEEeCCC---cEEEEEEecCC---CEEEEEEcCccccCCcEEEEEEEEECCEEEEEECCcccceeEc Confidence 99998555578999999862 35999999743 3467778 59999999999999999999999999999999988 Q ss_pred ecCCcccccCCCceEEEeecccc--cCCccccceEeEEEecCCcccc---cccCC Q FBpp0308937 185 TREPIELVFDSASTLYIGQAGSI--IGGKFEGYLEKINVYGNPDAIN---VTCMP 234 (973) Q Consensus 185 ~r~~~~l~~~~~~~l~IGq~g~~--~~~~F~G~LQ~Lri~~dP~~~~---~~C~e 234 (973) ++....+ ++.+..+++|++... ..++|+|.||+|+|+++|.++. ..||+ T Consensus 156 ~~~~~~~-~~~g~~~~~G~~~~~~g~~~~F~G~iq~l~i~~~~~~~~~~~~~~c~ 209 (209) T 2erf_A 156 DVPIQSV-FTRDLASIARLRIAKGGVNDNFQGVLQNVRFVFGTTPEDILRNKGCS 209 (209) T ss_dssp SSCGGGT-CCTTHHHHEEEEESCCTTTCBCCEEEEEEEEECSCCHHHHHHTTCCC T ss_pred CCccccc-cCCCCeeeEEEEecCCCCcccceEEeeEEEEEeCCCHHHhhhhccCC Confidence 8752121 333333345554211 1248999999999999998755 47774No 8>3hqv_B Collagen alpha-2(I) chain; native, in SITU, molecular envelope, triple-helical, supermolecular, supramolecular, packing structure; 5.16A {Rattus norvegicus} SCOP: i.25.1.1 PDB: 3hr2_B Probab=99.97 E-value=2.4e-28 Score=305.23 Aligned_cols=7 Identities=57% Similarity=1.270 Sum_probs=2.5 Q ss_pred CCCCCCC Q FBpp0308937 640 GRPEPPR 646 (973) Q Consensus 640 g~pgppg 646 (973) |.+++|+ T Consensus 1017 GppGpPG 1023 (1028) T 3hqv_B 1017 GPPGPPG 1023 (1028) T ss_pred CCCCCCC Confidence 3333333No 9>1za4_A Thrombospondin 1; TSP-1, NTSP-1, HBD, arixtra, cell adhesion; HET: SGN; 1.90A {Homo sapiens} SCOP: b.29.1.4 PDB: 2ouh_A 2ouj_A Probab=99.96 E-value=2e-29 Score=272.35 Aligned_cols=195 Identities=18% Similarity=0.263 Sum_probs=155.6 Q ss_pred chhhccchhhhccCCC-CCceEEeccCCC-CcceEecCCcccCCcchhccccc---c--c-ceEEEEEeeccCCCCceEE Q FBpp0308937 34 DALAEYTLTDIMNNNQ-FAGIEFGEAEDG-FPAFRFLQTADVKSPYRMLLPEK---L--Y-EFAILITFRQSSLKGGYLF 105 (973) Q Consensus 34 D~l~~~dL~~l~~~~~-~~GV~~v~G~d~-~pAy~f~~~a~l~~pt~~lfp~~---~--~-eFSllaT~R~~~~~~g~Lf 105 (973) |+.+.|||+++++++. ..||++++|.+. .+||+|.+.+.+..+++.+||.. | + ||+|++|||+.+++.++|| T Consensus 12 ~d~~~~DLl~~lgl~~~~~GV~~~~G~~~~~~Ay~~~~~~~~~~~t~~~~P~g~~~~~~p~eFsi~~tlr~~~~~~~~Lf 91 (251) T 1za4_A 12 GDNSVFDIFELTGAARKGSGRRLVKGPDPSSPAFRIEDANLIPPVPDDKFQDLVDAVRTEKGFLLLASLRQMKKTRGTLL 91 (251) T ss_dssp ---CEEEHHHHHCCCCTTSSEEEECCSSTTSCEEEESCGGGSCCCCHHHHHHHHHHHHHHTEEEEEEEEEECTTCEEEEE T ss_pred CcccCcceehhhCCCCccCCeEEccCCCCCccEEEEcCcccccCChhHhCcchhhccCCCCcEEEEEEEEecCCCCcEEE Confidence 5588899999999887 679999999886 99999999999999999999994 8 7 9999999999999999999 Q ss_pred EEEcCCCCeEEEEEEEcccccCceeEEEEEEecccccceeeeee-ecccCCCceEEEEEEEecCeEEEEEccccceeeee Q FBpp0308937 106 SVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLASF-GVAHVPDKWNSIALQVLSDKVSFYYDCELRNTTLV 184 (973) Q Consensus 106 sI~~~~~~~~qlgl~lsg~~~~~~~i~L~Y~~~~~~~~q~~~sF-~v~l~dg~WHrlaLsV~g~~VtLyVDC~~~~t~~l 184 (973) +|++..+..++|+|++++.. +.+.|+|++. + .+++++| .++++|++||||+|+|++++|+|||||+++.++.+ T Consensus 92 si~d~~~~~q~lgv~l~g~~---~~l~~~y~~~-G--~~~~~~f~~~~L~dg~WH~lalsV~~~~VtLyvDC~~~~~~~l 165 (251) T 1za4_A 92 ALERKDHSGQVFSVVSNGKA---GTLDLSLTVQ-G--KQHVVSVEEALLATGQWKSITLFVQEDRAQLYIDCEKMENAEL 165 (251) T ss_dssp EEEETTSSCEEEEEEEETTT---TEEEEEEEET-T--EEEEEEESSCCCCSSSCEEEEEEEETTEEEEEETTSCCEEEEC T ss_pred EEEcCCCCEEEEEEEEeCCC---cEEEEEEecC-C--CEEEEEEeccccCCCcEEEEEEEEECCEEEEEECCcccccccc Confidence 99998555566899999862 3599999984 3 3467788 69999999999999999999999999999999988 Q ss_pred ecCCcccccCCC----ceEEEeecccccCCccccceEeEEE--ecCCcccc-cccCCCCC Q FBpp0308937 185 TREPIELVFDSA----STLYIGQAGSIIGGKFEGYLEKINV--YGNPDAIN-VTCMPPPK 237 (973) Q Consensus 185 ~r~~~~l~~~~~----~~l~IGq~g~~~~~~F~G~LQ~Lri--~~dP~~~~-~~C~e~p~ 237 (973) ++....+ +..+ +.+++++.+ ..++|+|+||+|+| +||+.++. +.||+.+. T Consensus 166 ~~~~~~~-~~~G~~~~g~~~~~~g~--~~~~f~G~lq~L~Iv~~~d~~~a~~~~~Ce~~~ 222 (251) T 1za4_A 166 DVPIQSV-FTRDLASIARLRIAKGG--VNDNFQGVLQNVRFVFGTTPEDILRNKGCSSST 222 (251) T ss_dssp SSCGGGT-SCTTGGGTEEEEESCCS--TTCBCCEEEEEEEEECSCCHHHHHHHTTCC--- T ss_pred cCCcccc-cCCCcEEEEEEEecCCC--CccceEEEEEEEEEEccCChhhhccccCCCCCC Confidence 8752222 2233 334444321 23589999999999 67776654 58888754No 10>3hsh_A Endostatin, collagen alpha-1(XVIII) chain; extracellular matrix, basement membrane, collagen trimerization domain, folding, association; 1.80A {Homo sapiens} PDB: 3hon_A Probab=99.60 E-value=5.6e-16 Score=127.08 Aligned_cols=52 Identities=27% Similarity=0.484 Sum_probs=50.7 Q ss_pred eeEeecCHHHHhhccCCCCCCceEEecccceEEEEEcCCceEeeccccccCC Q FBpp0308937 682 GAVTFQNIDEMTKKSALNPPGTLAYITEEEALLVRVNKGWQYIALGTLVPIA 733 (973) Q Consensus 682 g~~~~~~~~~m~~~~~~~~~Gtl~y~~~~~~l~vrv~~g~~~i~lg~~~p~~ 733 (973) |+++|+|+++|+++++.+++|||+|++|+++|||||+||||+|+|+.++|++ T Consensus 4 gv~~~~t~~~ml~~~~~~~eGtL~yv~d~~eLyiRVr~Gwr~V~Lg~~~pip 55 (56) T 3hsh_A 4 GVRLWATRQAMLGQVHEVPEGWLIFVAEQEELYVRVQNGFRKVQLEARTPLP 55 (56) T ss_dssp CEEEESSHHHHHHHGGGSCTTCEEEETTTTEEEEEETTEEEEECEEEEEECC T ss_pred cEEEEecHHHHHhhCccCCCeEEEEEEecceEEEEEcCcEEEEeecccccCC Confidence 6899999999999999999999999999999999999999999999999986No 11>3n3f_A Collagen alpha-1(XV) chain; extracellular matrix, basement membrane, collagen trimerization domain, folding, association, chain selection helix; 2.00A {Homo sapiens} Probab=99.59 E-value=8.7e-16 Score=125.16 Aligned_cols=52 Identities=35% Similarity=0.742 Sum_probs=49.8 Q ss_pred eeEeecCHHHHhhccCCCCCCceEEecccceEEEEEcCCceEeeccccccCC Q FBpp0308937 682 GAVTFQNIDEMTKKSALNPPGTLAYITEEEALLVRVNKGWQYIALGTLVPIA 733 (973) Q Consensus 682 g~~~~~~~~~m~~~~~~~~~Gtl~y~~~~~~l~vrv~~g~~~i~lg~~~p~~ 733 (973) ++++|+|+++|+++++.+++|||+|++|+++|||||+||||+|+||.++|++ T Consensus 2 ~v~~~~t~~~M~~~~~~~~eGtL~yv~d~~eLyiRVr~Gwr~V~Lg~~ip~p 53 (54) T 3n3f_A 2 LVTAFSNMDDMLQKAHLVIEGTFIYLRDSTEFFIRVRDGWKKLQLGELIPIP 53 (54) T ss_dssp CEEEESSHHHHHTTGGGSCTTEEEEETTTTEEEEEETTEEEECCCCCCCCCC T ss_pred CcEEEecHHHHHhhCccCCCeEEEEEEecceEEEEEcCceeeeeecccccCC Confidence 4789999999999999999999999999999999999999999999999874No 12>3sh4_A LG3 peptide; actin disassambly, integrin alpha12 BETA1, metal binding Pro; 1.50A {Homo sapiens} SCOP: b.29.1.0 PDB: 3sh5_A Probab=98.79 E-value=1.2e-07 Score=97.59 Aligned_cols=149 Identities=12% Similarity=0.101 Sum_probs=98.6 Q ss_pred cceEecCCcccCCcchhccccc-cc-ceEEEEEeeccCCCCceEEEEEcC----CCCeEEEEEEEcccccCceeEEEEEE Q FBpp0308937 63 PAFRFLQTADVKSPYRMLLPEK-LY-EFAILITFRQSSLKGGYLFSVVNP----LDTVVQLGVHLSPVVKNSYNVSLVYT 136 (973) Q Consensus 63 pAy~f~~~a~l~~pt~~lfp~~-~~-eFSllaT~R~~~~~~g~LfsI~~~----~~~~~qlgl~lsg~~~~~~~i~L~Y~ 136 (973) .+..|.....+..+... |+.. .. +|+|.+.||.... .+.||.+.+. .....+|.|.|..- .+.|.|. T Consensus 6 ~~~~F~g~sy~~~~~~~-~~~~~~~~~~~is~~frT~~~-~Glll~~~~~~~~~~~~~d~~~l~l~~G-----~l~~~~~ 78 (195) T 3sh4_A 6 YGAYFHDDGFLAFPGHV-FSRSLPEVPETIELEVRTSTA-SGLLLWQGVEVGEAGQGKDFISLGLQDG-----HLVFRYQ 78 (195) T ss_dssp TEEEEEEEEEEEECGGG-GCCCSTTCCEEEEEEEEECCS-SEEEEEECCCTTCTTSTTCEEEEEEETT-----EEEEEEE T ss_pred cccEECCCceEEECccc-ccccccCCCcEEEEEEEeCCC-CeEEEEccCcccCCCCCCCeEEEEEECC-----EEEEEEE Confidence 35566655555555442 3332 23 7999999996544 4688766531 23456777877643 2777776 Q ss_pred ecccccceeeeeeecccCCCceEEEEEEEecCeEEEEEccccceeeeeecCCcccccCCCceEEEeecccc-------cC Q FBpp0308937 137 QADQNIGRKLASFGVAHVPDKWNSIALQVLSDKVSFYYDCELRNTTLVTREPIELVFDSASTLYIGQAGSI-------IG 209 (973) Q Consensus 137 ~~~~~~~q~~~sF~v~l~dg~WHrlaLsV~g~~VtLyVDC~~~~t~~l~r~~~~l~~~~~~~l~IGq~g~~-------~~ 209 (973) ...+. ..+.....+.|++||+|+|...+..++|||||....+...+.....+ +....||||..... .. T Consensus 79 ~g~g~---~~i~s~~~l~Dg~WH~V~v~~~~~~~~L~VD~~~~~~~~~~~~~~~l--~~~~~l~iGG~~~~~~~~~~~~~ 153 (195) T 3sh4_A 79 LGSGE---ARLVSEDPINDGEWHRVTALREGRRGSIQVDGEELVSGRSPGPNVAV--NAKGSVYIGGAPDVATLTGGRFS 153 (195) T ss_dssp CSSCE---EEEEEEEECCSSSCEEEEEEEETTEEEEEETTCCCEEEECCSSCCCC--CCCSCEEESCCTTHHHHTTTSCC T ss_pred CCCCE---EEEEcCCeecCCCeEEEEEEEeCCEEEEEECCcceeeEECCCcccee--cCCCCEEECCCCCcccccccccc Confidence 44322 23334677889999999999999999999999987665444332233 34567999975321 13 Q ss_pred CccccceEeEEEec Q FBpp0308937 210 GKFEGYLEKINVYG 223 (973) Q Consensus 210 ~~F~G~LQ~Lri~~ 223 (973) ..|.|-|++|+|.. T Consensus 154 ~~F~GCi~~v~i~~ 167 (195) T 3sh4_A 154 SGITGCVKNLVLHS 167 (195) T ss_dssp CCCSEEEEEEEEEE T ss_pred CCcEEEeeEEEECC Confidence 56999999999964No 13>3v64_A Low-density lipoprotein receptor-related protein; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus} SCOP: b.29.1.4 PDB: 3v65_A Probab=98.77 E-value=1.5e-07 Score=96.46 Aligned_cols=128 Identities=16% Similarity=0.197 Sum_probs=88.8 Q ss_pred ceEEEEEeeccCCCCceEEEEEcCCCCeEEEEEEEcccccCceeEEEEEEecccccceeeeeeecccCCCceEEEEEEEe Q FBpp0308937 87 EFAILITFRQSSLKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLASFGVAHVPDKWNSIALQVL 166 (973) Q Consensus 87 eFSllaT~R~~~~~~g~LfsI~~~~~~~~qlgl~lsg~~~~~~~i~L~Y~~~~~~~~q~~~sF~v~l~dg~WHrlaLsV~ 166 (973) +|+|.++||.... .+.||...+..+...++.|.|..- .+.|.|....+. ..+.....+.|++||+|++... T Consensus 36 ~~~is~~frT~~~-~glll~~~~~~~~~~~~~l~l~~G-----~l~~~~~~g~~~---~~~~~~~~v~Dg~WH~V~v~~~ 106 (191) T 3v64_A 36 SNHFELSLRTEAT-QGLVLWIGKAAERADYMALAIVDG-----HLQLSYDLGSQP---VVLRSTVKVNTNRWLRIRAHRE 106 (191) T ss_dssp EEEEEEEEECSCS-SEEEEEESCCSTTCCEEEEEEETT-----EEEEEEESSSCC---EEEEEEEECTTSSCEEEEEEEE T ss_pred ceEEEEEEEeCCC-CeEEEEeCCCCCCCCEEEEEEECC-----EEEEEEECCCCc---EEEEeCCEecCCCcEEEEEEEE Confidence 8999999997654 467776654323466777777543 277777654322 2344467788999999999999 Q ss_pred cCeEEEEEccccceeeeeecCCcccccCCCceEEEeecccc---------cCCccccceEeEEEecCC Q FBpp0308937 167 SDKVSFYYDCELRNTTLVTREPIELVFDSASTLYIGQAGSI---------IGGKFEGYLEKINVYGNP 225 (973) Q Consensus 167 g~~VtLyVDC~~~~t~~l~r~~~~l~~~~~~~l~IGq~g~~---------~~~~F~G~LQ~Lri~~dP 225 (973) +..++||||+....+...+.....+ +....||||..... ....|.|-|++|+|...+ T Consensus 107 ~~~~~L~vD~~~~~~~~~~~~~~~l--~~~~~l~iGg~~~~~~~~~~~~~~~~~F~Gci~~v~i~~~~ 172 (191) T 3v64_A 107 HREGSLQVGNEAPVTGSSPLGATQL--DTDGALWLGGLQKLPVGQALPKAYGTGFVGCLRDVVVGHRQ 172 (191) T ss_dssp TTEEEEEETTSCCEEEECCTTCCCE--EECSEEEESCCSSCCSSCCSCGGGTSBCEEEEEEEEETTEE T ss_pred ccEEEEEECCcceEeeECCCCcccC--cCCCCEEECCCCcccccccccccccCCCeEEeeEEEECCEE Confidence 9999999999987655444333333 33467999976321 134699999999996433No 14>3pve_A Agrin, AGRN protein; mRNA splicing, structural genomics, PSI-2, protein structure initiative; 1.40A {Mus musculus} SCOP: b.29.1.0 Probab=98.66 E-value=6.9e-07 Score=91.54 Aligned_cols=150 Identities=13% Similarity=0.119 Sum_probs=95.9 Q ss_pred ceEecCCcccCCcchhccccccc-ceEEEEEeeccCCCCceEEEEEcC-CCCeEEEEEEEcccccCceeEEEEEEecccc Q FBpp0308937 64 AFRFLQTADVKSPYRMLLPEKLY-EFAILITFRQSSLKGGYLFSVVNP-LDTVVQLGVHLSPVVKNSYNVSLVYTQADQN 141 (973) Q Consensus 64 Ay~f~~~a~l~~pt~~lfp~~~~-eFSllaT~R~~~~~~g~LfsI~~~-~~~~~qlgl~lsg~~~~~~~i~L~Y~~~~~~ 141 (973) +..|...+.+..+....++..+. +|+|.+.||....+ +.||...+. .....++.|.|..- .+.|.|....+. T Consensus 11 ~~~F~g~syl~~~~~~~~~~~~~~~~~isl~frT~~~~-GlLl~~~~~~~~~~d~~~l~l~~G-----~l~~~~~~g~~~ 84 (189) T 3pve_A 11 LADFNGFSYLELKGLHTFERDLGEKMALEMVFLARGPS-GLLLYNGQKTDGKGDFVSLALHNR-----HLEFRYDLGKGA 84 (189) T ss_dssp CEEEESSCEEEECCGGGC-------CEEEEEEEESSSC-EEEEEEESCC-CCSCEEEEEEETT-----EEEEEEESSSCE T ss_pred eeEECCCceEEEcCcccccccccceEEEEEEEecCCCC-eEEEEecCCCCCCCCeEEEEEECC-----EEEEEEECCCCe Confidence 44566555565555555444454 89999999976554 678877653 12356677777643 277777643321 Q ss_pred cceeeeeeecccCCCceEEEEEEEecCeEEEEEccccceeeeeecCCcccccCCCceEEEeecccc--------cCCccc Q FBpp0308937 142 IGRKLASFGVAHVPDKWNSIALQVLSDKVSFYYDCELRNTTLVTREPIELVFDSASTLYIGQAGSI--------IGGKFE 213 (973) Q Consensus 142 ~~q~~~sF~v~l~dg~WHrlaLsV~g~~VtLyVDC~~~~t~~l~r~~~~l~~~~~~~l~IGq~g~~--------~~~~F~ 213 (973) ..+.....+.|++||+|.|...+..++||||+....+...+.....+ +....||||..... ....|. T Consensus 85 ---~~~~s~~~v~Dg~WH~V~v~~~~~~~~L~vD~~~~~~~~~~~~~~~l--~~~~~l~iGG~~~~~~~~~~~~~~~~F~ 159 (189) T 3pve_A 85 ---AIIRSKEPIALGTWVRVFLERNGRKGALQVGDGPRVLGESPVPHTML--NLKEPLYVGGAPDFSKLARGAAVASGFD 159 (189) T ss_dssp ---EEEECSSCCCTTSEEEEEEEEETTEEEEEETTSCCEEEECCSSCCCC--CCCSCEEESCCSCGGGSCGGGCCCSBCE T ss_pred ---EEEeCCCcccCCCeEEEEEEEeCCEEEEEECCCceeeeEcCCCccee--cCCCCEEECccCChhhcccccccCCCCe Confidence 23334667889999999999999999999999876554444332333 33467999964211 135799 Q ss_pred cceEeEEEecC Q FBpp0308937 214 GYLEKINVYGN 224 (973) Q Consensus 214 G~LQ~Lri~~d 224 (973) |-|++|+|... T Consensus 160 GCi~~v~i~~~ 170 (189) T 3pve_A 160 GAIQLVSLRGH 170 (189) T ss_dssp EEEEEEEETTE T ss_pred EEeeEEEECCE Confidence 99999998643No 15>1pz7_A Agrin; structural protein; 1.42A {Gallus gallus} SCOP: b.29.1.4 PDB: 1pz8_A 1pz9_A 1q56_A Probab=98.66 E-value=4.7e-07 Score=94.00 Aligned_cols=126 Identities=13% Similarity=0.174 Sum_probs=86.6 Q ss_pred ceEEEEEeeccCCCCceEEEEEcCCCCeEEEEEEEcccccCceeEEEEEEecccccceeeeeeecccCCCceEEEEEEEe Q FBpp0308937 87 EFAILITFRQSSLKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLASFGVAHVPDKWNSIALQVL 166 (973) Q Consensus 87 eFSllaT~R~~~~~~g~LfsI~~~~~~~~qlgl~lsg~~~~~~~i~L~Y~~~~~~~~q~~~sF~v~l~dg~WHrlaLsV~ 166 (973) +|+|.+.||.... .+.||...+..+...++.|.|..- .+.|.|....+. ..+.....+.|++||+|.|... T Consensus 49 ~~~is~~frT~~~-~GlLl~~~~~~~~~d~~~l~l~~G-----~l~~~~~~g~g~---~~l~s~~~v~Dg~WH~V~v~~~ 119 (204) T 1pz7_A 49 SNHFELSIKTEAT-QGLILWSGKGLERSDYIALAIVDG-----FVQMMYDLGSKP---VVLRSTVPINTNHWTHIKAYRV 119 (204) T ss_dssp EEEEEEEEEECCS-SEEEEEESCCSTTCCEEEEEEETT-----EEEEEEESSSCC---EEEEEEEECCSSSCEEEEEEEE T ss_pred ceEEEEEEEeCCC-CeEEEEecCCCCCCceEEEEEECC-----EEEEEEECCCCe---EEEECCccccCCCcEEEEEEEE Confidence 7889999997644 467776654323566777777643 277777643322 2334467788999999999999 Q ss_pred cCeEEEEEccccceeeeeecCCcccccCCCceEEEeecccc---------cCCccccceEeEEEec Q FBpp0308937 167 SDKVSFYYDCELRNTTLVTREPIELVFDSASTLYIGQAGSI---------IGGKFEGYLEKINVYG 223 (973) Q Consensus 167 g~~VtLyVDC~~~~t~~l~r~~~~l~~~~~~~l~IGq~g~~---------~~~~F~G~LQ~Lri~~ 223 (973) +..++||||+....+...+.....| +....||||..... ....|.|-|++|+|.. T Consensus 120 ~~~~~L~VD~~~~~~~~~~~~~~~l--~~~~~l~lGG~~~~~~~~~~~~~~~~~F~GCi~~v~in~ 183 (204) T 1pz7_A 120 QREGSLQVGNEAPITGSSPLGATQL--DTDGALWLGGMERLSVAHKLPKAYSTGFIGCIRDVIVDR 183 (204) T ss_dssp TTEEEEEETTSCCEEEECCSSCCCE--EECCEEEESSCSCCSTTTTSCGGGGSBCEEEEEEEEETT T ss_pred eCEEEEEECCeeeEeeecCCCccee--cCCCCEEECCCCccccccccccccCCCCeEEEeEEEECC Confidence 9999999999887554444332333 33467999975321 1246999999999953No 16>4pbp_A C-reactive protein; acute phase protein, pentraxin; 1.65A {Danio rerio} PDB: 4pbo_A Probab=98.63 E-value=5.5e-07 Score=93.34 Aligned_cols=153 Identities=16% Similarity=0.160 Sum_probs=100.3 Q ss_pred CcceEecCC---cccCCcchhcccccccceEEEEEeeccCC--CCceEEEEEcCCCCeEEEEEEEcccccCceeEEEEEE Q FBpp0308937 62 FPAFRFLQT---ADVKSPYRMLLPEKLYEFAILITFRQSSL--KGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYT 136 (973) Q Consensus 62 ~pAy~f~~~---a~l~~pt~~lfp~~~~eFSllaT~R~~~~--~~g~LfsI~~~~~~~~qlgl~lsg~~~~~~~i~L~Y~ 136 (973) ..|+.|... ..+..+....+ ...+|+|.+++|+... ....||+..+.. .. .|.|.++.. +. +.|... T Consensus 9 g~al~F~g~s~~~~v~~~~~~~~--~~~~fTi~~Wvk~~~~~~~~~~i~s~~~~~-~~-~~~l~~~~~--~~--~~~~~~ 80 (210) T 4pbp_A 9 GKVLQFKTATDNSYVKLYPEKPL--SLSAFTLCMRVATELPLDREVILFAYYTPD-VD-ELNVWRERD--GR--VSLYIQ 80 (210) T ss_dssp TEEEEECSCCSSCEEEEECSSCC--CBSEEEEEEEEECCSCTTSCEEEEEEEETT-EE-EEEEEECTT--SC--EEEEES T ss_pred CcEEECCCCCccCeEEEcCCCCC--CcCCEEEEEEEEcCCCCCCCceEEEEEcCC-CC-cEEEEEcCC--Cc--EEEEEE Confidence 347777743 33333332221 2349999999999765 467899987753 23 666665532 22 555553 Q ss_pred ecccccceeeeeeecccCCCceEEEEEEEecC--eEEEEEccccceeeeeecCCcccccCCCceEEEeecccc------c Q FBpp0308937 137 QADQNIGRKLASFGVAHVPDKWNSIALQVLSD--KVSFYYDCELRNTTLVTREPIELVFDSASTLYIGQAGSI------I 208 (973) Q Consensus 137 ~~~~~~~q~~~sF~v~l~dg~WHrlaLsV~g~--~VtLyVDC~~~~t~~l~r~~~~l~~~~~~~l~IGq~g~~------~ 208 (973) ..+. .+.+...+.+++||+|++...+. .++||||.+++.+..+.... .+.....++||+.... . T Consensus 81 ~~~~-----~~~~~~~~~~~~W~hva~t~d~~~g~~~lYvnG~~~~~~~~~~~~---~~~~~~~l~iG~~~~~~gg~~~~ 152 (210) T 4pbp_A 81 SSKD-----AAFFRLPPLSTLQTHLCVAWESATGLTAFWMDGRRSLHQVYRKGY---SIRSGGTVVLGQDPDSYVGSFDV 152 (210) T ss_dssp CSSC-----CEEECCCCCCSSCEEEEEEEETTTCEEEEEETTEECCCEECCTTC---CBCSSCEEEESSCCSBTTBCCCG T ss_pred cCCc-----eEEecCcccCCCEEEEEEEEECCCCcEEEEECCeEccCcccCCCc---EECCCCeEEEccccccCCCccCc Confidence 2221 23455677899999999999976 89999999998865443211 1234678999986321 2 Q ss_pred CCccccceEeEEEecCCccccc Q FBpp0308937 209 GGKFEGYLEKINVYGNPDAINV 230 (973) Q Consensus 209 ~~~F~G~LQ~Lri~~dP~~~~~ 230 (973) ...|.|.|.+|||+..+....+ T Consensus 153 ~~~f~G~idevri~~~aLs~~e 174 (210) T 4pbp_A 153 DQSFVGEIANLQMWDYVLSSAQ 174 (210) T ss_dssp GGCCCEEEEEEEEESSCCCHHH T ss_pred cccceEEecceEEecccCCHHH Confidence 3579999999999987765443No 17>3flp_A SAP-like pentraxin; physiological doubly-stacked heptamer, pentraxin fold, cyclic heptamer, invertebrate lectin, sugar binding protein; 2.30A {Limulus polyphemus} PDB: 3flr_A 3flt_A Probab=98.59 E-value=1.3e-06 Score=90.82 Aligned_cols=160 Identities=15% Similarity=0.176 Sum_probs=102.0 Q ss_pred CcceEecCC---cccCCcchhcccccccceEEEEEeeccCCCCceEEEEEcCCCCeEEEEEEEcccccCceeEEEEEEec Q FBpp0308937 62 FPAFRFLQT---ADVKSPYRMLLPEKLYEFAILITFRQSSLKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQA 138 (973) Q Consensus 62 ~pAy~f~~~---a~l~~pt~~lfp~~~~eFSllaT~R~~~~~~g~LfsI~~~~~~~~qlgl~lsg~~~~~~~i~L~Y~~~ 138 (973) ..|+.|... +.+.++....|+ ...+|+|.+++|+.......||+..+. .....|.|.+.........+.|.. . T Consensus 6 ~~al~F~G~s~~~yv~~~~~~~l~-~~~~fTi~~Wvk~~~~~~~~i~s~~~~-~~~~~~~l~~~~~~~~~~~~~~~~--~ 81 (217) T 3flp_A 6 DVKISFPGTQNPKFPHLRFMQTLP-AVRQLTVCQRIKPFHRNTGYIFSCATS-NQDNQFITSMYVKSDGTLNLGLQV--N 81 (217) T ss_dssp GEEEEECCCBTTBCCEEEESSCBC-CBSEEEEEEEEEESCSSCEEEEEEEET-TEEEEEEEEEEECTTSEEEEEEEE--T T ss_pred CeEEECCCCCccCeEEeccCCCCC-CcCeEEEEEEEEeCCCCCcEEEEEECC-CCCCeEEEEEccCCCcceEEEEEE--C Confidence 357777753 445555443333 234999999999877566789988775 334455565543211121233333 2 Q ss_pred ccccceeeeeeecccCCCceEEEEEEEecC--eEEEEEccccceeee-eecCCcccccCCCceEEEeecccc------cC Q FBpp0308937 139 DQNIGRKLASFGVAHVPDKWNSIALQVLSD--KVSFYYDCELRNTTL-VTREPIELVFDSASTLYIGQAGSI------IG 209 (973) Q Consensus 139 ~~~~~q~~~sF~v~l~dg~WHrlaLsV~g~--~VtLyVDC~~~~t~~-l~r~~~~l~~~~~~~l~IGq~g~~------~~ 209 (973) +.. ...+.....+.+++||+|++...+. .++||||.+++.+.. +... ..+.....++||+.... .. T Consensus 82 g~~--~~~~~~~~~~~~~~W~hva~t~d~~~g~~~lYvnG~~~~~~~~~~~~---~~~~~~~~l~iG~~~~~~gg~~~~~ 156 (217) T 3flp_A 82 ASS--NKYISCPIEIELGQWYHVCHVWSGVDGRMAVYANGSPCGTMENVGKG---HQISAGGTVVIGQEQDKIGGGFEEQ 156 (217) T ss_dssp TCC--CEEEEEEEECCTTSCEEEEEEEETTTTEEEEEETTEEEEEESCSSTT---CCBCSCBEEEESSCCSBTTBCCCGG T ss_pred Ccc--ceEEecCCccCCCCEEEEEEEEECCCCeEEEEECCEEcccccccCcC---cEeCCCCeEEECcccccCCCCcCcC Confidence 221 1233445667899999999999976 899999999987642 2221 11235678999986321 23 Q ss_pred CccccceEeEEEecCCccccc Q FBpp0308937 210 GKFEGYLEKINVYGNPDAINV 230 (973) Q Consensus 210 ~~F~G~LQ~Lri~~dP~~~~~ 230 (973) ..|.|.|.+|||+..+....+ T Consensus 157 ~~f~G~idevri~~~aLs~~e 177 (217) T 3flp_A 157 ESWSGELSDLQVWDEALTTHQ 177 (217) T ss_dssp GCCCEEEEEEEEESSCCCHHH T ss_pred CCceEEeeeEEEECccCCHHH Confidence 579999999999988765444No 18>2h0b_A Neurexin-1-alpha; B-sandwich, cell adhesion; 2.10A {Bos taurus} SCOP: b.29.1.4 Probab=98.52 E-value=1.8e-06 Score=87.90 Aligned_cols=127 Identities=18% Similarity=0.268 Sum_probs=86.1 Q ss_pred ceEEEEEeeccCCCCceEEEEEcCCCCeEEEEEEEcccccCceeEEEEEEecccccceeeee-eecccCCCceEEEEEEE Q FBpp0308937 87 EFAILITFRQSSLKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLAS-FGVAHVPDKWNSIALQV 165 (973) Q Consensus 87 eFSllaT~R~~~~~~g~LfsI~~~~~~~~qlgl~lsg~~~~~~~i~L~Y~~~~~~~~q~~~s-F~v~l~dg~WHrlaLsV 165 (973) +|+|.+.||... ..+.||..- +...+|.|.|..- .+.|.|....+.. ...+. -...+.|++||+|.+.. T Consensus 29 ~~~i~l~frT~~-~~GlLl~~~---~~~d~~~l~l~~G-----~l~~~~~~g~g~~-~~~~~~~~~~l~Dg~WH~V~v~~ 98 (184) T 2h0b_A 29 SDEITLSFKTLQ-RNGLMLHTG---KSADYVNLALKNG-----AVSLVINLGSGAF-EALVEPVNGKFNDNAWHDVKVTR 98 (184) T ss_dssp EEEEEEEEEESC-SCEEEEEEC---CTTEEEEEEEETT-----EEEEEEEESSCEE-EEEECCSSSCSSSSSCEEEEEEE T ss_pred ccEEEEEEEeCC-CCEEEEEec---CCCCEEEEEEECC-----EEEEEEECCCCeE-EEEEccCCCcccCCCeEEEEEEE Confidence 789999999765 456877652 3467788887643 2777776533221 11121 24678899999999999 Q ss_pred ecCeEEEEEccccceeeeeecCCcccccCCCceEEEeecccc-------cCCccccceEeEEEecCC Q FBpp0308937 166 LSDKVSFYYDCELRNTTLVTREPIELVFDSASTLYIGQAGSI-------IGGKFEGYLEKINVYGNP 225 (973) Q Consensus 166 ~g~~VtLyVDC~~~~t~~l~r~~~~l~~~~~~~l~IGq~g~~-------~~~~F~G~LQ~Lri~~dP 225 (973) .+..++||||+....+...+.....+ +....||||..... ....|.|-|++|+|...+ T Consensus 99 ~~~~~~L~VD~~~~~~~~~~~~~~~l--~~~~~l~iGG~~~~~~~~~~~~~~~F~GCi~~v~i~~~~ 163 (184) T 2h0b_A 99 NLRQVTISVDGILTTTGYTQEDYTML--GSDDFFYVGGSPSTADLPGSPVSNNFMGCLKEVVYKNND 163 (184) T ss_dssp ETTEEEEEETTTEEEEEECSTTCCCE--EECSEEEESCCTTGGGSTTCSCCCBCEEEEEEEEEEESS T ss_pred eCCEEEEEECCeeeeeeeCCCCceee--cCCCCEEECCCCccccccCCcccCCCEEEeeEEEECCEE Confidence 99999999999887554433322223 23467999975321 125699999999997654No 19>4avs_A Serum amyloid P-component; sugar binding protein, glycoprotein, disulfide bond, lectin, metal-binding; HET: NAG N7P; 1.40A {Homo sapiens} SCOP: b.29.1.5 PDB: 1lgn_A* 1gyk_A 2a3w_A* 2a3x_A* 2a3y_A* 1sac_A* 3d5o_A* 2w08_A* 3kqr_A* 4avt_A* 4avv_A* 4ayu_A* Probab=98.48 E-value=2.5e-06 Score=88.09 Aligned_cols=131 Identities=14% Similarity=0.065 Sum_probs=90.8 Q ss_pred ccceEEEEEeeccCCCCceEEEEEcCCCCeEEEEEEEcccccCceeEEEEEEecccccceeeeeeecccCCCceEEEEEE Q FBpp0308937 85 LYEFAILITFRQSSLKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLASFGVAHVPDKWNSIALQ 164 (973) Q Consensus 85 ~~eFSllaT~R~~~~~~g~LfsI~~~~~~~~qlgl~lsg~~~~~~~i~L~Y~~~~~~~~q~~~sF~v~l~dg~WHrlaLs 164 (973) ..+|+|.+++|+.......||+..+. .....|.|.++.. + .+.|.. .+ ..+.+...+.+++||+|++. T Consensus 30 ~~~fTi~~Wvk~~~~~~~~i~s~~~~-~~~~~~~l~~~~~--~--~~~~~~--~~-----~~~~~~~~~~~~~W~Hva~t 97 (204) T 4avs_A 30 LQNFTLCFRAYSDLSRAYSLFSYNTQ-GRDNELLVYKERV--G--EYSLYI--GR-----HKVTSKVIEKFPAPVHICVS 97 (204) T ss_dssp BSEEEEEEEEECCCCSCEEEEEEEET-TEEEEEEEEEEET--T--EEEEEE--TT-----EEEEEECCCCSSCCEEEEEE T ss_pred ccCEEEEEEEEcCCCCCcEEEEEEcC-CCCceEEEEEeCC--C--eEEEEE--CC-----EEEEecccccCCCEEEEEEE Confidence 34999999999887677889998775 3344555554322 2 255544 22 12344567789999999999 Q ss_pred EecC--eEEEEEccccceeeeeecCCcccccCCCceEEEeecccc------cCCccccceEeEEEecCCccccc Q FBpp0308937 165 VLSD--KVSFYYDCELRNTTLVTREPIELVFDSASTLYIGQAGSI------IGGKFEGYLEKINVYGNPDAINV 230 (973) Q Consensus 165 V~g~--~VtLyVDC~~~~t~~l~r~~~~l~~~~~~~l~IGq~g~~------~~~~F~G~LQ~Lri~~dP~~~~~ 230 (973) ..+. .++||||.+++.+..+.... .+.....++||+.... ....|.|.|.+|+|+..+....+ T Consensus 98 ~d~~~g~~~lYvnG~~~~~~~~~~~~---~~~~~~~l~iG~~~~~~gg~~~~~~~f~G~idevri~~~aLs~~e 168 (204) T 4avs_A 98 WESSSGIAEFWINGTPLVKKGLRQGY---FVEAQPKIVLGQEQDSYGGKFDRSQSFVGEIGDLYMWDSVLPPEN 168 (204) T ss_dssp EETTTCEEEEEETTEECCCEECCTTC---CBCSSCEEEESSCCSSSSCCCCGGGCCCEEEEEEEEESSCCCHHH T ss_pred EECCCCeEEEEECCeEecccccCCCc---eECCCceEEEcccccccCccccCCccceEEeceeEEECccCCHHH Confidence 9975 89999999998875443221 1234578999986311 13579999999999988765443No 20>2r16_A Neurexin-1-alpha; beta-sandwich, cell adhesion, splicing; 1.04A {Bos taurus} Probab=98.47 E-value=2.7e-06 Score=86.81 Aligned_cols=125 Identities=16% Similarity=0.227 Sum_probs=87.1 Q ss_pred ceEEEEEeeccCCCCceEEEEEcCCCCeEEEEEEEcccccCceeEEEEEEecccccceeeeeeecccCCCceEEEEEEEe Q FBpp0308937 87 EFAILITFRQSSLKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLASFGVAHVPDKWNSIALQVL 166 (973) Q Consensus 87 eFSllaT~R~~~~~~g~LfsI~~~~~~~~qlgl~lsg~~~~~~~i~L~Y~~~~~~~~q~~~sF~v~l~dg~WHrlaLsV~ 166 (973) .|+|.+.||... ..+.||...+. +...+|.|.|..- .+.|.|....+. ..+.....+.|++||+|.|... T Consensus 28 ~~~isl~frT~~-~~GlLl~~~~~-~~~d~l~l~L~~G-----~l~~~~~~g~~~---~~~~~~~~l~Dg~WH~V~v~~~ 97 (182) T 2r16_A 28 AEDVSLRFRSQR-AYGILMATTSR-DSADTLRLELDAG-----RVKLTVNLGKGP---ETLFAGYNLNDNEWHTVRVVRR 97 (182) T ss_dssp EEEEEEEEECSC-SSEEEEEEECS-SSCCEEEEEEETT-----EEEEEEESSSCC---EEEEECSSCCSSSCEEEEEEEE T ss_pred ccEEEEEEEeCC-CCEEEEEcCCC-CCCCEEEEEEECC-----EEEEEEEcCCcc---eEeccCCcccCCCcEEEEEEEE Confidence 788999999764 55789888764 3456777777643 277777643322 2334467888999999999999 Q ss_pred cCeEEEEEccccceeeeeecCCcccccCCCceEEEeeccc-----ccCCccccceEeEEEecC Q FBpp0308937 167 SDKVSFYYDCELRNTTLVTREPIELVFDSASTLYIGQAGS-----IIGGKFEGYLEKINVYGN 224 (973) Q Consensus 167 g~~VtLyVDC~~~~t~~l~r~~~~l~~~~~~~l~IGq~g~-----~~~~~F~G~LQ~Lri~~d 224 (973) +..++|+||+....+...+.....|.++ .||||-... .....|.|-|++|+|... T Consensus 98 ~~~~~L~VD~~~~~~~~~~~~~~~l~~~---~l~~Gg~~~~~~~~~~~~~F~GCi~~v~in~~ 157 (182) T 2r16_A 98 GKSLKLTVDDQQAMTGQMAGDHTRLEFH---NIETGIITERRYLSSVPSNFIGHLQSLTFNGM 157 (182) T ss_dssp TTEEEEEETTCCEEEEECCSSCCCEEEE---EEEESSCCCCTTCSSCCCCCEEEEEEEEETTE T ss_pred CCEEEEEEeCCceeeEEcCCCCcEEEec---ceEEcCcccccccCCCCCCCEEEEeEEEECCE Confidence 9999999999987655444433344332 288885421 123569999999999543No 21>3bod_A Neurexin-1-alpha; neurexin1D, LNS6, alternative splicing, calcium, cell adhesion, EGF-like domain, glycoprotein, membrane, metal- binding; 1.70A {Mus musculus} SCOP: b.29.1.4 PDB: 3vkf_C* 2xb6_C* 2wqz_C* 1c4r_A 3bop_A 3mw4_A* Probab=98.46 E-value=3.5e-06 Score=85.83 Aligned_cols=124 Identities=16% Similarity=0.172 Sum_probs=85.4 Q ss_pred ceEEEEEeeccCCCCceEEEEEcCCCCeEEEEEEEcccccCceeEEEEEEecccccceeee-eeecccCCCceEEEEEEE Q FBpp0308937 87 EFAILITFRQSSLKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLA-SFGVAHVPDKWNSIALQV 165 (973) Q Consensus 87 eFSllaT~R~~~~~~g~LfsI~~~~~~~~qlgl~lsg~~~~~~~i~L~Y~~~~~~~~q~~~-sF~v~l~dg~WHrlaLsV 165 (973) .++|.+.||... ..+.||...+..+...++.|.|..- .+.|.|....+. ..+ .....+.|++||+|.|.. T Consensus 30 ~~~isl~frT~~-~~GlLl~~~~~~~~~d~l~l~L~~G-----~l~~~~~~g~~~---~~~~~~~~~l~Dg~WH~V~v~r 100 (178) T 3bod_A 30 ADRLAIGFSTVQ-KEAVLVRVDSSSGLGDYLELHIHQG-----KIGVKFNVGTDD---IAIEESNAIINDGKYHVVRFTR 100 (178) T ss_dssp EEEEEEEEECCC-SSEEEEEEEESSSSCCEEEEEEETT-----EEEEEEESSSCC---EEEECCSSCCCSSSCEEEEEEE T ss_pred CCEEEEEEEECC-CCEEEEEEcCCCCCCCEEEEEEECC-----EEEEEEEcCCCc---EEEecCCcccCCCCcEEEEEEE Confidence 678888888654 4578887776423456777777543 277778643322 222 236778899999999999 Q ss_pred ecCeEEEEEccccceee-eeecCCcccccCCCceEEEeecccccCCccccceEeEEEec Q FBpp0308937 166 LSDKVSFYYDCELRNTT-LVTREPIELVFDSASTLYIGQAGSIIGGKFEGYLEKINVYG 223 (973) Q Consensus 166 ~g~~VtLyVDC~~~~t~-~l~r~~~~l~~~~~~~l~IGq~g~~~~~~F~G~LQ~Lri~~ 223 (973) .+..++|+|||....+. ..+..... ++....||||... ....|+|-|++|+|-. T Consensus 101 ~~~~~~L~VD~~~~~~~~~~~~~~~~--l~~~~~l~iGG~~--~~~~F~GCi~~v~in~ 155 (178) T 3bod_A 101 SGGNATLQVDSWPVIERYPAGRQLTI--FNSQATIIIGGKE--QGQPFQGQLSGLYYNG 155 (178) T ss_dssp ETTEEEEEETTSCCEEECCCSCCCCC--BCCEEEEEESCCT--TSCBCCEEEEEEEETT T ss_pred eCCEEEEEECCceeeeEecCCCcceE--ecCCCCEEEeCcc--CCCCCeEEEceEEECC Confidence 99999999999875432 33332222 3345679999752 3367999999999854No 22>3pvn_A C-reactive protein; pentraxin family, immune system; 1.98A {Homo sapiens} SCOP: b.29.1.5 PDB: 1gnh_A 1lj7_A 3l2y_A 1b09_A 3pvo_A Probab=98.44 E-value=3.2e-06 Score=87.34 Aligned_cols=131 Identities=16% Similarity=0.144 Sum_probs=90.3 Q ss_pred ccceEEEEEeeccCC--CCceEEEEEcCCCCeEEEEEEEcccccCceeEEEEEEecccccceeeeeeecccCCCceEEEE Q FBpp0308937 85 LYEFAILITFRQSSL--KGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLASFGVAHVPDKWNSIA 162 (973) Q Consensus 85 ~~eFSllaT~R~~~~--~~g~LfsI~~~~~~~~qlgl~lsg~~~~~~~i~L~Y~~~~~~~~q~~~sF~v~l~dg~WHrla 162 (973) ..+|+|.+++|+... ....||+..+. .....|.|.++.. + .+.|.. .+ ....+...+.+++||+|+ T Consensus 30 ~~~fTi~~Wvk~~~~~~~~~~i~s~~~~-~~~~~~~l~~~~~--~--~~~~~~--~~-----~~~~~~~~~~~~~W~hva 97 (206) T 3pvn_A 30 LKAFTVCLHFYTELSSTRGYSIFSYATK-RQDNEILIFWSKD--I--GYSFTV--GG-----SEILFEVPEVTVAPVHIC 97 (206) T ss_dssp BSEEEEEEEEEESGGGTCCEEEEEEEET-TEEEEEEEEEETT--T--EEEEEE--TT-----EEEEEECSSCCSSCEEEE T ss_pred hhcEEEEEEEEeCCCCCCCcEEEEEECC-CCCCEEEEEEeCC--C--EEEEEE--CC-----eeeEeecccCCCCcEEEE Confidence 349999999998754 67789998775 3344555555432 2 244444 22 123445677899999999 Q ss_pred EEEecC--eEEEEEccccceeeeeecCCcccccCCCceEEEeeccc------ccCCccccceEeEEEecCCccccc Q FBpp0308937 163 LQVLSD--KVSFYYDCELRNTTLVTREPIELVFDSASTLYIGQAGS------IIGGKFEGYLEKINVYGNPDAINV 230 (973) Q Consensus 163 LsV~g~--~VtLyVDC~~~~t~~l~r~~~~l~~~~~~~l~IGq~g~------~~~~~F~G~LQ~Lri~~dP~~~~~ 230 (973) +...+. .++||||.+++.+..+.... .+.....++||+... .....|.|.|.+|||+..+....+ T Consensus 98 ~t~d~~~g~~~lYvnG~~~~~~~~~~~~---~~~~~~~l~iG~~~~~~gg~~~~~~~f~G~idevri~~~aLs~~e 170 (206) T 3pvn_A 98 TSWESASGIVEFWVDGKPRVRKSLKKGY---TVGAEASIILGQEQDSFGGNFEGSQSLVGDIGNVNMWDFVLSPDE 170 (206) T ss_dssp EEEETTTCEEEEEETTEECCCEECCTTC---CBCSSCEEEESSCCSBTTBCCCGGGCCCEEEEEEEEESSCCCHHH T ss_pred EEEECCCceEEEEECCcCcccccccCCc---eECCCCEEEEeeccccCCCCcccccceEEEecceEEEcccCCHHH Confidence 999975 89999999998875443321 123467899998631 123579999999999987765443No 23>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus} Probab=98.26 E-value=1.1e-05 Score=92.95 Aligned_cols=127 Identities=15% Similarity=0.162 Sum_probs=86.1 Q ss_pred ceEEEEEeeccCCCCceEEEEEcCCCCeEEEEEEEcccccCceeEEEEEEecccccceeeeee-ecccCCCceEEEEEEE Q FBpp0308937 87 EFAILITFRQSSLKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLASF-GVAHVPDKWNSIALQV 165 (973) Q Consensus 87 eFSllaT~R~~~~~~g~LfsI~~~~~~~~qlgl~lsg~~~~~~~i~L~Y~~~~~~~~q~~~sF-~v~l~dg~WHrlaLsV 165 (973) .+.|.+.||.. ...+.||.+.+......+|.|.|..- .+.|.|....+. ..+.+ ...+.||+||+|.|.. T Consensus 250 ~~~isl~frT~-~~~GlLl~~~~~~~~~~~l~l~l~~G-----~l~~~~~~g~~~---~~~~~~~~~l~DG~WH~V~v~~ 320 (410) T 3asi_A 250 ADRLAIGFSTV-QKEAVLVRVDSSSGLGDYLELHIHQG-----KIGVKFNVGTDD---IAIEESNAIINDGKYHVVRFTR 320 (410) T ss_dssp EEEEEEEEECC-CSEEEEEEEEECTTCCCEEEEEEETT-----EEEEEEESSSSC---EEEECCSCCCCSSSCEEEEEEE T ss_pred ccEEEEEEEec-CCCeEEEEEecCCCCCcEEEEEEeCC-----EEEEEEECCCCC---eEEccCCcCCCCCCeEEEEEEE Confidence 45666677754 45678888876533457788877643 267777543321 23333 5778899999999999 Q ss_pred ecCeEEEEEccccceeeeeecCCcccccCCCceEEEeecccccCCccccceEeEEEecCC Q FBpp0308937 166 LSDKVSFYYDCELRNTTLVTREPIELVFDSASTLYIGQAGSIIGGKFEGYLEKINVYGNP 225 (973) Q Consensus 166 ~g~~VtLyVDC~~~~t~~l~r~~~~l~~~~~~~l~IGq~g~~~~~~F~G~LQ~Lri~~dP 225 (973) .+..++|+|||..+.+......... .++....||||.. .....|+|-|++|+|-..+ T Consensus 321 ~~~~~~L~VD~~~~~~~~~~~~~~~-~l~~~~~l~lGg~--~~~~~F~Gci~~v~in~~~ 377 (410) T 3asi_A 321 SGGNATLQVDSWPVIERYPAGRQLT-IFNSQATIIIGGK--EQGQPFQGQLSGLYYNGLK 377 (410) T ss_dssp ETTEEEEEETTSCCEEECCSSCCCC-CBCCEEEEEESST--TTTCCCCEEEEEEEETTBC T ss_pred ECCEEEEEECCccceeecCCCcccE-EecCCceEEEcCC--cCCCCCEEEEEEEEECCHH Confidence 9999999999988765432211111 1345678999975 2346899999999996543No 24>4c1w_A Neuraminidase; sugar binding protein, carbohydrate-binding module, sialic A binding; HET: SLT; 1.84A {Streptococcus pneumoniae} PDB: 4c1x_A* Probab=98.24 E-value=1.4e-05 Score=81.70 Aligned_cols=137 Identities=15% Similarity=0.153 Sum_probs=88.0 Q ss_pred cceEEEEEeeccC--CCCceEEEEEcCCCCeEEEEEEEcccccCceeEEEEEEecccccc-eeeeeeecccCCCceEEEE Q FBpp0308937 86 YEFAILITFRQSS--LKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIG-RKLASFGVAHVPDKWNSIA 162 (973) Q Consensus 86 ~eFSllaT~R~~~--~~~g~LfsI~~~~~~~~qlgl~lsg~~~~~~~i~L~Y~~~~~~~~-q~~~sF~v~l~dg~WHrla 162 (973) .+|+|.+++|+.. .....||++.+......+|.|.+... . ..|.+....+... ...+.-...+.+++||+|+ T Consensus 33 ~~fTv~~Wvk~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~---~--~~~~~~~~~g~~~~~~~~~~~~~~~~g~W~Hva 107 (188) T 4c1w_A 33 ENATVHMEFKPDAKAPAFYNLFSVSSATKKDEYFTMAVYNN---T--ATLEGRGSDGKQFYNNYNDAPLKVKPGQWNSVT 107 (188) T ss_dssp SSEEEEEEEEECSSCCSEEEEEEEECSSCTTCEEEEEEETT---E--EEEEEECTTCCBSSCCCTTCSCBCCTTSCEEEE T ss_pred CCeEEEEEEECCCCCCCccEEEEccCCcccCceEEEEEeCC---c--cEEEEEECCCCeEeccccccccccCCCCEEEEE Confidence 4999999999976 45567999877543345666777643 1 2344433222110 0011113456689999999 Q ss_pred EEEec-------CeEEEEEccccceeee-eecCCcccccCCCceEEEeecccc--cCCccccceEeEEEecCCcccc Q FBpp0308937 163 LQVLS-------DKVSFYYDCELRNTTL-VTREPIELVFDSASTLYIGQAGSI--IGGKFEGYLEKINVYGNPDAIN 229 (973) Q Consensus 163 LsV~g-------~~VtLyVDC~~~~t~~-l~r~~~~l~~~~~~~l~IGq~g~~--~~~~F~G~LQ~Lri~~dP~~~~ 229 (973) +...+ ..++||||.+++.+.. ....... +.....++||+.... ....|.|.|.+|||+..+.... T Consensus 108 ~t~d~~~~~~~~~~~~lYvnG~~~~~~~~~~~~~~~--~~~~~~~~iG~~~~~g~~~~~f~G~idevriy~~aLs~~ 182 (188) T 4c1w_A 108 FTVEKPTAELPKGRVRLYVNGVLSRTSLRSGNFIKD--MPDVTHVQIGATKRANNTVWGSNLQIRNLTVYNRALTPE 182 (188) T ss_dssp EEEECCCSSSTTCEEEEEETTEEEEEECSCCCCGGG--CTTCCEEEEESEEETTEEECCCCEEEEEEEEESSCCCHH T ss_pred EEEeCCcccCCCceEEEEECCEEeeeeeccCCcccc--CCCCccEEECccccCCCcccccccEEeeEEEECCcCCHH Confidence 99999 8999999999987742 2211111 123467999986211 1236999999999998765433No 25>2v73_A CBM40, putative EXO-alpha-sialidase; carbohydrate-binding module, bacterial pathogen, sialic acid, sugar-binding protein; HET: SIA; 2.2A {Clostridium perfringens} Probab=98.21 E-value=4.3e-05 Score=79.04 Aligned_cols=138 Identities=17% Similarity=0.169 Sum_probs=89.4 Q ss_pred ccceEEEEEeeccCCCCceEEEEEcCCCCeEEEEEEEcccccCceeEEEEEEeccccccee-eeeeecccCCCceEEEEE Q FBpp0308937 85 LYEFAILITFRQSSLKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRK-LASFGVAHVPDKWNSIAL 163 (973) Q Consensus 85 ~~eFSllaT~R~~~~~~g~LfsI~~~~~~~~qlgl~lsg~~~~~~~i~L~Y~~~~~~~~q~-~~sF~v~l~dg~WHrlaL 163 (973) +.+|+|.++||+.......||++.+......+|.|.+.. + .+.|............ .....+.+.+ +||+|++ T Consensus 39 l~~fTvs~Wvk~~~~~~~~lfs~~~~~~~~~~~~l~~~~---g--~l~~~~~~~~~~~~~~~~~~~~~~~~~-~W~Hva~ 112 (191) T 2v73_A 39 LEEGTIVTRFNMNDTSIQSLIGLSDGNKANNYFSLYVSG---G--KVGYELRRQEGNGDFNVHHSADVTFNR-GINTLAL 112 (191) T ss_dssp CSSEEEEEEEEECCCSCEEEEEEECTTCSSCEEEEEECS---S--EEEEEEEECTTSSCEEEEEEEECCCCS-SCEEEEE T ss_pred CCCEEEEEEEEeCCCCceEEEEecCCCCcCcEEEEEEEC---C--EEEEEEEecCCCcceeeecccccccCC-ceEEEEE Confidence 359999999999875556799998764444566676662 2 2556655443211111 1112333345 9999999 Q ss_pred EEec-CeEEEEEccccceeeeeec-CCcccccCCCceEEEeecccc---cCCccccceEeEEEecCCccccc Q FBpp0308937 164 QVLS-DKVSFYYDCELRNTTLVTR-EPIELVFDSASTLYIGQAGSI---IGGKFEGYLEKINVYGNPDAINV 230 (973) Q Consensus 164 sV~g-~~VtLyVDC~~~~t~~l~r-~~~~l~~~~~~~l~IGq~g~~---~~~~F~G~LQ~Lri~~dP~~~~~ 230 (973) ...+ ..++||||-+++.+..... .... .+ ....++||+.... ....|.|.|.+|+|+..+....+ T Consensus 113 t~d~~~~~~lYvnG~~~~~~~~~~~~~~~-~~-~~~~~~iG~~~~~~g~~~~~f~G~Idevri~~~aLs~~e 182 (191) T 2v73_A 113 KIEKGIGAKIFLNGSLVKTVSDPNIKFLN-AI-NLNSGFIGKTDRANGYNEYLFRGNIDFMNIYDKPVSDNY 182 (191) T ss_dssp EEETTTEEEEEETTEEEEEEECTTCCCGG-GS-CCCEEEESSCCCCSSSCCCCCCEEEEEEEEESSCCCHHH T ss_pred EEeCCCcEEEEECCEEeeeeccCCccccc-cc-CCceEEECCCCCCCCccCcCCceEEeEEEEECCcCCHHH Confidence 9997 7899999999987765432 1110 01 2357999986321 13469999999999976654443No 26>1d2s_A SHBG, sex hormone-binding globulin; steroid transport, laminin G-like domain, jellyroll, androgen binding protein (ABP); HET: DHT; 1.55A {Homo sapiens} SCOP: b.29.1.4 PDB: 1kdk_A* 1kdm_A* Probab=98.12 E-value=3.6e-05 Score=77.72 Aligned_cols=122 Identities=11% Similarity=0.015 Sum_probs=82.0 Q ss_pred ceEEEEEeeccCCCCceEEEEEcCCCCeEEEEEEEcccccCceeEEEEEEecccccceeeeeeecccCCCceEEEEEEEe Q FBpp0308937 87 EFAILITFRQSSLKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLASFGVAHVPDKWNSIALQVL 166 (973) Q Consensus 87 eFSllaT~R~~~~~~g~LfsI~~~~~~~~qlgl~lsg~~~~~~~i~L~Y~~~~~~~~q~~~sF~v~l~dg~WHrlaLsV~ 166 (973) +|+|.+.||... ..+.||...+. +...+|.|.|..- .+.|.|..... ...+.....+.|++||+|.|... T Consensus 27 ~~~isl~frT~~-~~GlLl~~~~~-~~~d~l~l~L~~G-----~l~~~~~~g~~---~~~~~~~~~v~DG~WH~V~v~~~ 96 (170) T 1d2s_A 27 KTSSSFEVRTWD-PEGVIFYGDTN-PKDDWFMLGLRDG-----RPEIQLHNHWA---QLTVGAGPRLDDGRWHQVEVKME 96 (170) T ss_dssp CCEEEEEEEESC-SSEEEEEEEEE-TTTEEEEEEEETT-----EEEEEEESSSC---EEEEECSCCCCSSSCEEEEEEEE T ss_pred CcEEEEEEEECC-CCEEEEEeCCC-CCCCEEEEEEECC-----EEEEEEECCCc---cEEeeCCCccCCCCCEEEEEEEe Confidence 788888999764 45788877664 3456777777643 27777764321 12233366788999999999999 Q ss_pred cCeEEEEEccccceeeeeecCCcccccCCCceEEEeeccc-------ccCCccccceEe-EEEecC Q FBpp0308937 167 SDKVSFYYDCELRNTTLVTREPIELVFDSASTLYIGQAGS-------IIGGKFEGYLEK-INVYGN 224 (973) Q Consensus 167 g~~VtLyVDC~~~~t~~l~r~~~~l~~~~~~~l~IGq~g~-------~~~~~F~G~LQ~-Lri~~d 224 (973) +..++|+||.+...+.. ..+. . ....||||.... .....|+|=|++ ++|-.. T Consensus 97 ~~~~~L~VD~~~~~~~~--~~~g-~---~~~~lylGG~p~~~~~~~~~~~~~F~GCi~~~~~in~~ 156 (170) T 1d2s_A 97 GDSVLLEVDGEEVLRLR--QVSG-H---PIMRIALGGLLFPASNLRLPLVPALDGCLRRDSWLDKQ 156 (170) T ss_dssp TTEEEEEETTEEEEEET--TCCC-C---CEEEEEESSCSSCGGGSSSCCCCCCCEEEEEEEESCGG T ss_pred CCEEEEEECCeeeeeec--cCCC-C---cCCCEEECCccccccccccCCCCCeeEecccceecCCe Confidence 99999999998664421 1111 1 236789987521 113569999999 776543No 27>2r1d_A Neurexin-1-beta, neurexin I-beta; beta-sandwich, cell adhesion, splicing; 2.60A {Rattus norvegicus} SCOP: b.29.1.4 PDB: 3biw_E* Probab=98.09 E-value=5.5e-05 Score=80.37 Aligned_cols=125 Identities=16% Similarity=0.158 Sum_probs=85.2 Q ss_pred ceEEEEEeeccCCCCceEEEEEcCCCCeEEEEEEEcccccCceeEEEEEEecccccceeee-eeecccCCCceEEEEEEE Q FBpp0308937 87 EFAILITFRQSSLKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLA-SFGVAHVPDKWNSIALQV 165 (973) Q Consensus 87 eFSllaT~R~~~~~~g~LfsI~~~~~~~~qlgl~lsg~~~~~~~i~L~Y~~~~~~~~q~~~-sF~v~l~dg~WHrlaLsV 165 (973) .+.|.+.||... ..+.||.+.+......+|.|.|..- .+.|.|....+. ..+ .....+.|++||+|.|.. T Consensus 64 ~~~isl~FrT~~-~~GlLl~~~~~~~~~dfl~L~L~~G-----~l~~~~~~G~~~---~~l~~~~~~l~DG~WH~V~v~r 134 (226) T 2r1d_A 64 ADRLAIGFSTVQ-KEAVLVRVDSSSGLGDYLELHIHQG-----KIGVKFNVGTDD---IAIEESNAIINDGKYHVVRFTR 134 (226) T ss_dssp EEEEEEEEECCC-SSEEEEEEEECTTCCCEEEEEEETT-----EEEEEEESSSCE---EEEECCSSCCCSSSCEEEEEEE T ss_pred cCEEEEEEEECC-CCeEEEEecCCCCCCCEEEEEEECC-----EEEEEEECCCCe---EEEecCCcCccCCCcEEEEEEE Confidence 677888888754 5578887776423456777777543 277888653321 222 235678899999999999 Q ss_pred ecCeEEEEEcccccee-eeeecCCcccccCCCceEEEeecccccCCccccceEeEEEecC Q FBpp0308937 166 LSDKVSFYYDCELRNT-TLVTREPIELVFDSASTLYIGQAGSIIGGKFEGYLEKINVYGN 224 (973) Q Consensus 166 ~g~~VtLyVDC~~~~t-~~l~r~~~~l~~~~~~~l~IGq~g~~~~~~F~G~LQ~Lri~~d 224 (973) .+..++|+||.....+ ...+..... ++....||||-.. ....|.|-|++|+|-.- T Consensus 135 ~~~~~~L~VD~~~~~~~~~~~~~~~~--l~~~~~l~lGG~p--~~~~F~GCi~~v~in~~ 190 (226) T 2r1d_A 135 SGGNATLQVDSWPVIERYPAGRQLTI--FNSQATIIIGGKE--QGQPFQGQLSGLYYNGL 190 (226) T ss_dssp ETTEEEEEETTSCCEEECCSSCCCCC--BCSEEEEEESSTT--TTCCCCEEEEEEEETTB T ss_pred cCCEEEEEECCeeeeeEecCCCcceE--EcCCCCEEEeccc--CCCCCEEEEeeEEECCE Confidence 9999999999987533 233332222 3345679999752 23679999999998643No 28>2jd4_A Laminin subunit alpha-1; basement membrane protein, metal binding protein; 1.9A {Mus musculus} SCOP: b.29.1.0 Probab=98.07 E-value=4.9e-05 Score=86.49 Aligned_cols=126 Identities=15% Similarity=0.295 Sum_probs=83.1 Q ss_pred ceEEEEEeeccCCCCceEEEEEcCCCCeEEEEEEEcccccCceeEEEEEEecccccceeeeee----ecccCCCceEEEE Q FBpp0308937 87 EFAILITFRQSSLKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLASF----GVAHVPDKWNSIA 162 (973) Q Consensus 87 eFSllaT~R~~~~~~g~LfsI~~~~~~~~qlgl~lsg~~~~~~~i~L~Y~~~~~~~~q~~~sF----~v~l~dg~WHrla 162 (973) +|+|.+.||.. ...+.||.+.+. ...+|.|.|... .+.|.|....+. ..+.+ ...+.|++||+|. T Consensus 221 ~~~isl~frT~-~~~GlLl~~~~~--~~d~l~l~L~~G-----~l~~~~~~g~g~---~~~~~~~~~~~~l~DG~WH~V~ 289 (383) T 2jd4_A 221 DLQITLEFRTT-SKNGVLLGISSA--KVDAIGLEIVDG-----KVLFHVNNGAGR---ITATYQPRAARALCDGKWHTLQ 289 (383) T ss_dssp CEEEEEEEEES-CSCEEEEEEECS--SSCEEEEEEETT-----EEEEEEESSSCE---EEEEECCSSTTGGGSSSCEEEE T ss_pred ceEEEEEEEeC-CCCEEEEEecCC--CCCEEEEEEECC-----EEEEEEECCCCc---EEEEEecCCCccccCCCcEEEE Confidence 78888999965 556788887754 355777777543 277777543221 22332 4577899999999 Q ss_pred EEEecCeEEEEEccccceeeeeecCCcccccCCCceEEEeeccc-------ccCCccccceEeEEEecCC Q FBpp0308937 163 LQVLSDKVSFYYDCELRNTTLVTREPIELVFDSASTLYIGQAGS-------IIGGKFEGYLEKINVYGNP 225 (973) Q Consensus 163 LsV~g~~VtLyVDC~~~~t~~l~r~~~~l~~~~~~~l~IGq~g~-------~~~~~F~G~LQ~Lri~~dP 225 (973) |...+..++|+||+....+......... ++....||||..-. .....|+|-|++|+|...+ T Consensus 290 v~~~~~~~~L~VD~~~~~~~~~~~~~~~--l~~~~~l~iGG~p~~~~~~~~~~~~~F~GCi~~v~in~~~ 357 (383) T 2jd4_A 290 AHKSKHRIVLTVDGNSVRAESPHTHSTS--ADTNDPIYVGGYPAHIKQNSLSSRASFRGCVRNLRLSRGS 357 (383) T ss_dssp EEEETTEEEEEETTEEEEEC----CCCC--BCCCEEEEESCCCTTSCCTTCSCCCBCEEEEEEEEEC--- T ss_pred EEEeCCEEEEEECCeeeccccCCccccc--ccCCCCEEEcCccCcccccccccCCCCceEeeeEEECCCC Confidence 9999999999999987655432211112 24457899997421 1234799999999997543No 29>1f5f_A SHBG, sex hormone-binding globulin; jellyroll, signaling protein; HET: DHT; 1.70A {Homo sapiens} SCOP: b.29.1.4 PDB: 1lhw_A* 1lho_A* 1lhn_A* 1lhv_A* 1lhu_A* Probab=97.99 E-value=7.1e-05 Score=77.98 Aligned_cols=128 Identities=11% Similarity=0.018 Sum_probs=83.2 Q ss_pred ceEEEEEeeccCCCCceEEEEEcCCCCeEEEEEEEcccccCceeEEEEEEecccccceeeeeeecccCCCceEEEEEEEe Q FBpp0308937 87 EFAILITFRQSSLKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLASFGVAHVPDKWNSIALQVL 166 (973) Q Consensus 87 eFSllaT~R~~~~~~g~LfsI~~~~~~~~qlgl~lsg~~~~~~~i~L~Y~~~~~~~~q~~~sF~v~l~dg~WHrlaLsV~ 166 (973) +|+|.+.||.... .+.||...+. +...+|.|.|..- .+.|.|..... ...+.-...+.|++||+|.|... T Consensus 39 ~~~is~~frT~~~-~GlLl~~~~~-~~~d~l~L~L~~G-----~l~~~~~~g~~---~~~~~s~~~vnDG~WH~V~l~~~ 108 (205) T 1f5f_A 39 KTSSSFEVRTWDP-EGVIFYGDTN-PKDDWFMLGLRDG-----RPEIQLHNHWA---QLTVGAGPRLDDGRWHQVEVKME 108 (205) T ss_dssp CCEEEEEEEESCS-SEEEEEEEEE-TTTEEEEEEEETT-----EEEEEEESSSC---EEEEECSCCCCSSSCEEEEEEEE T ss_pred CcEEEEEEEECCC-CEEEEEeCCC-CCCCEEEEEEeCC-----EEEEEEECCCc---eEEEecCCccCCCCCEEEEEEEe Confidence 7888889997654 5688877654 3456788887643 26777764321 12223356788999999999999 Q ss_pred cCeEEEEEccccceee-eeecCCcccccCCCceEEEeeccc-------ccCCccccceEe-EEEecCC Q FBpp0308937 167 SDKVSFYYDCELRNTT-LVTREPIELVFDSASTLYIGQAGS-------IIGGKFEGYLEK-INVYGNP 225 (973) Q Consensus 167 g~~VtLyVDC~~~~t~-~l~r~~~~l~~~~~~~l~IGq~g~-------~~~~~F~G~LQ~-Lri~~dP 225 (973) +..++|+||.....+. ......... ......||||-... .....|+|=|++ |+|-..+ T Consensus 109 ~~~~~L~VD~~~~~~~~~~~~~~~~~-~~~~~~lyvGG~p~~~~~~~~~~~~~F~GCi~~~v~in~~~ 175 (205) T 1f5f_A 109 GDSVLLEVDGEEVLRLRQVSGPLTSK-RHPIMRIALGGLLFPASNLRLPLVPALDGCLRRDSWLDKQA 175 (205) T ss_dssp TTEEEEEETTEEEEEECSCCCCC-----CCEEEEEESSCSSCGGGSSSCCCCCCCEEEEEEECSCGGG T ss_pred CCEEEEEECCccceeeecccCccccC-CCcCccEEECCccCcccccccCCCCCccEEecccEEECCeE Confidence 9999999999766442 111111111 11246799997521 113569999999 8776544No 30>1dyk_A Laminin alpha 2 chain; metal binding protein; 2.0A {Mus musculus} SCOP: b.29.1.4 b.29.1.4 PDB: 1okq_A 1qu0_A Probab=97.98 E-value=8.4e-05 Score=84.90 Aligned_cols=126 Identities=10% Similarity=0.238 Sum_probs=84.4 Q ss_pred ceEEEEEeeccCCCCceEEEEEcCCCCeEEEEEEEcccccCceeEEEEEEecccccceeeeee----ecccCCCceEEEE Q FBpp0308937 87 EFAILITFRQSSLKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLASF----GVAHVPDKWNSIA 162 (973) Q Consensus 87 eFSllaT~R~~~~~~g~LfsI~~~~~~~~qlgl~lsg~~~~~~~i~L~Y~~~~~~~~q~~~sF----~v~l~dg~WHrla 162 (973) +|+|.+.||... ..+.||.+.+. ...+|.|.|... .|.|.|....+. ..+.+ ...+.||+||+|. T Consensus 233 ~~~is~~frT~~-~~GlLl~~~~~--~~~~l~l~L~~G-----~l~~~~~~g~g~---~~~~~~~~~~~~l~DG~WH~V~ 301 (394) T 1dyk_A 233 DLLVEFEFRTTR-PTGVLLGVSSQ--KMDGMGIEMIDE-----KLMFHVDNGAGR---FTAIYDAEIPGHMCNGQWHKVT 301 (394) T ss_dssp EEEEEEEEEESC-SCEEEEEEECS--SSCEEEEEEETT-----EEEEEEESSSCC---EEEEECCCSTTSTTSSSCEEEE T ss_pred ceEEEEEEEeCC-CCcEEEEeccC--CCCEEEEEEECC-----EEEEEEECCCCc---eEEEEecCCCCcCcCCCcEEEE Confidence 788888888754 45788887654 345677776533 277777543222 22222 4677899999999 Q ss_pred EEEecCeEEEEEccccceeeeeecCCcccccCCCceEEEeecccc-------cCCccccceEeEEEecCC Q FBpp0308937 163 LQVLSDKVSFYYDCELRNTTLVTREPIELVFDSASTLYIGQAGSI-------IGGKFEGYLEKINVYGNP 225 (973) Q Consensus 163 LsV~g~~VtLyVDC~~~~t~~l~r~~~~l~~~~~~~l~IGq~g~~-------~~~~F~G~LQ~Lri~~dP 225 (973) |...+..++|+||+........... ...++....||||..-.. ....|+|-|++|+|-..+ T Consensus 302 v~~~~~~~~L~VD~~~~~~~~~~~~--~~~~~~~~~l~iGG~p~~~~~~~~~~~~~F~GCi~~v~in~~~ 369 (394) T 1dyk_A 302 AKKIKNRLELVVDGNQVDAQSPNSA--STSADTNDPVFVGGFPGGLNQFGLTTNIRFRGCIRSLKLTKGT 369 (394) T ss_dssp EEEETTEEEEEETTEEEEEECCCTT--CCCBCCCBCCEESCCCTTCCCTTCSCCCCCEEEEEEEEEECTT T ss_pred EEEeCCEEEEEECCcccccccCCcc--ccccccCCCEEECCCCCcccccCccccCCccccccEEEECCcc Confidence 9999999999999987654322111 122344577999975211 124699999999997544No 31>2r1b_A Neurexin-1-beta, neurexin I-beta; beta-sandwich, cell adhesion, splicing; 1.72A {Rattus norvegicus} SCOP: b.29.1.4 PDB: 3mw2_A* 3b3q_E* 3mw3_A* Probab=97.97 E-value=0.00012 Score=77.16 Aligned_cols=126 Identities=16% Similarity=0.186 Sum_probs=81.1 Q ss_pred ceEEEEEeeccCCCCceEEEEEcCCCCeEEEEEEEcccccCceeEEEEEEecccccceeeeee-ecccCCCceEEEEEEE Q FBpp0308937 87 EFAILITFRQSSLKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLASF-GVAHVPDKWNSIALQV 165 (973) Q Consensus 87 eFSllaT~R~~~~~~g~LfsI~~~~~~~~qlgl~lsg~~~~~~~i~L~Y~~~~~~~~q~~~sF-~v~l~dg~WHrlaLsV 165 (973) .+.|.+.||... ..+.||.+.+......+|.|.|..- .+.|.|....+. ..+.. ...+.|++||+|.|.. T Consensus 36 ~~~isl~frT~~-~~GlLl~~~~~~~~~d~l~l~L~~G-----~l~~~~~~G~~~---~~~~~~~~~l~DG~WH~V~v~r 106 (220) T 2r1b_A 36 ADRLAIGFSTVQ-KEAVLVRVDSSSGLGDYLELHIHQG-----KIGVKFNVGTDD---IAIEESNAIINDGKYHVVRFTR 106 (220) T ss_dssp EEEEEEEEECCC-SSEEEEEEEESTTCCCEEEEEEETT-----EEEEEEESSSSC---EEEECTTCCCCSSSCEEEEEEE T ss_pred CCEEEEEEEECC-CCeEEEEEcCCCCCCCEEEEEEeCC-----EEEEEEECCCCc---EEEecCCcCcCCCCCEEEEEEE Confidence 678888888765 4578887766422456777777533 277888653322 23333 5678899999999999 Q ss_pred ecCeEEEEEccccceee-ee-ecCCccc---------------------------ccCCCceEEEeecccccCCccccce Q FBpp0308937 166 LSDKVSFYYDCELRNTT-LV-TREPIEL---------------------------VFDSASTLYIGQAGSIIGGKFEGYL 216 (973) Q Consensus 166 ~g~~VtLyVDC~~~~t~-~l-~r~~~~l---------------------------~~~~~~~l~IGq~g~~~~~~F~G~L 216 (973) .+..++|.||.....+. .. ......+ .++....||||-.. ....|.|=| T Consensus 107 ~~~~~~L~VD~~~~~~~~~~g~~~~~~l~~~~~~~~~~~g~~~~~~~~d~~~~~~~~n~~~~l~iGG~p--~~~~F~GCi 184 (220) T 2r1b_A 107 SGGNATLQVDSWPVIERYPAGNNDNERLAIARQRIPYRLGRVVDEWLLDKGRQLTIFNSQATIIIGGKE--QGQPFQGQL 184 (220) T ss_dssp ETTEEEEEETTSCCEEECC-----------------CHHHHHHHHHHHHHHHGGGSBCCEEEEEESSTT--TTCCCCEEE T ss_pred eCCEEEEEECCCcceeeccCCCCccceeeccccccceeecccccccccccccceeEecCcCcEEECCcc--CCCCCeEEE Confidence 99999999998765332 11 0000000 01223679999652 245799999 Q ss_pred EeEEEec Q FBpp0308937 217 EKINVYG 223 (973) Q Consensus 217 Q~Lri~~ 223 (973) ++|+|-. T Consensus 185 ~~v~in~ 191 (220) T 2r1b_A 185 SGLYYNG 191 (220) T ss_dssp EEEEETT T ss_pred CcEEECC Confidence 9999854No 32>4qvs_A S-layer domain-containing protein; human microbiome, midwest center for structural genomics, MC biology; 2.10A {Ruminiclostridium thermocellum atcc 27ORGANISM_TAXID} Probab=97.94 E-value=2e-05 Score=82.07 Aligned_cols=166 Identities=14% Similarity=0.182 Sum_probs=97.3 Q ss_pred eEEeccCCCCcceEecCC-cccCCcchhcccccccceEEEEEeeccCCCC---ceEEEEEcCCCCeEEEEEEEcccccCc Q FBpp0308937 53 IEFGEAEDGFPAFRFLQT-ADVKSPYRMLLPEKLYEFAILITFRQSSLKG---GYLFSVVNPLDTVVQLGVHLSPVVKNS 128 (973) Q Consensus 53 V~~v~G~d~~pAy~f~~~-a~l~~pt~~lfp~~~~eFSllaT~R~~~~~~---g~LfsI~~~~~~~~qlgl~lsg~~~~~ 128 (973) ++++.+.. ..|+.|... ..+.++.. ++ ....+|+|.++||+..... ..||+.-+ ...++.+..... ++ T Consensus 38 ~~~~~g~~-g~al~f~G~~~~v~~~~~-~~-~~~~~fTi~~Wvk~~~~~~~~~~~i~~~~~---~~~~~~l~~~~~--g~ 109 (227) T 4qvs_A 38 NGVVPGLN-GNSVSLDGVDDYVALPDG-IA-GTFYNFTIAFWVRLDTIGEQPIFDFFDSGS---NNKYMRLTAESD--GK 109 (227) T ss_dssp SCEEECSS-SEEECCCSSSCEEECCTT-SS-TTCSSCCCCCCCCCSSCSSEEEEEEECTTC---SSCEEEEEECTT--SC T ss_pred ceeccCCC-CcEEEecCcCCEEEcCcc-cc-cCCCCeEEEEEEEeCCCCCCcceeeEecCC---CCcEEEEEEcCC--Cc Confidence 44555433 368888754 33555432 11 1223999999999987664 34554322 233444433321 22 Q ss_pred eeEEEEEEecccccceeeeeeecccCCCceEEEEEEEecCeEEEEEccccceeeeee-cCCcccccCCCceEEEeecccc Q FBpp0308937 129 YNVSLVYTQADQNIGRKLASFGVAHVPDKWNSIALQVLSDKVSFYYDCELRNTTLVT-REPIELVFDSASTLYIGQAGSI 207 (973) Q Consensus 129 ~~i~L~Y~~~~~~~~q~~~sF~v~l~dg~WHrlaLsV~g~~VtLyVDC~~~~t~~l~-r~~~~l~~~~~~~l~IGq~g~~ 207 (973) +.|.+....... ...+.-...+.+++||+|++...+..++||||.+++.+.... ..+..+ +.....++||..... T Consensus 110 --l~~~~~~~~~~~-~~~~~~~~~~~~~~W~hva~t~d~~~~~lYvnG~~~~~~~~~~~~~~~~-~~~~~~~~iG~~~~~ 185 (227) T 4qvs_A 110 --IKFAMTQSGYYG-EKTITSGSALTEGVWKHVAVTLSGDTGTLYINGENVGENNTLSLRPLTF-LGETSKGYIGKSHQT 185 (227) T ss_dssp --EEEEEESSCGGG-CEEEECCCCCCTTCCCCEEEEEETTEEEEEETTEEEEEETTCCC-CCSS-SGGGCCCCSSCCCCC T ss_pred --EEEEEeCCCCCc-ceEEecCCcccCCcEEEEEEEEeCCeEEEEECCEEeeeccCCCCCcccc-cCCCcceeecCCcCC Confidence 555554332111 122222456678999999999999999999999998776432 122222 022345788876321 Q ss_pred c-------CCccccceEeEEEecCCccccc Q FBpp0308937 208 I-------GGKFEGYLEKINVYGNPDAINV 230 (973) Q Consensus 208 ~-------~~~F~G~LQ~Lri~~dP~~~~~ 230 (973) . ...|.|.|.+|||+..+....+ T Consensus 186 ~~~~~~~~~~~f~G~idevri~~~aLs~~e 215 (227) T 4qvs_A 186 DSSEDPYYNSYLHGMIDDFRIFDRALSADE 215 (227) T ss_dssp SCTTCSSTTCCCCSCCCCCCCCSSCCCHHH T ss_pred CccCCcccccccCcEeeEEEEEcccCCHHH Confidence 1 2379999999999987754433No 33>1h30_A GAS6, growth-arrest-specific protein; laminin G-domain protein, vitamin K-dependent protein, AXL/SKY/MER ligand, laminin G- like domain; 2.2A {Homo sapiens} SCOP: b.29.1.4 b.29.1.4 PDB: 2c5d_A* 4ra0_A* Probab=97.52 E-value=0.0013 Score=75.92 Aligned_cols=126 Identities=13% Similarity=0.149 Sum_probs=83.7 Q ss_pred ceEEEEEeeccCCCCceEEEEEcCCCCeEEEEEEEcccccCceeEEEEEEecccccceeeeeeecccCCCceEEEEEEEe Q FBpp0308937 87 EFAILITFRQSSLKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLASFGVAHVPDKWNSIALQVL 166 (973) Q Consensus 87 eFSllaT~R~~~~~~g~LfsI~~~~~~~~qlgl~lsg~~~~~~~i~L~Y~~~~~~~~q~~~sF~v~l~dg~WHrlaLsV~ 166 (973) .|+|.+.||... ..+.||-..+. +...+|.|.|..- .+.|.|....+. .+..-...+.|++||+|.|... T Consensus 62 ~~~isl~frT~~-~~GlLl~~~~~-~~~d~~~L~L~~G-----~l~~~~~~g~~~---~~~~~~~~lnDg~WH~V~v~~~ 131 (422) T 1h30_A 62 RLVAEFDFRTFD-PEGILLFAGGH-QDSTWIVLALRAG-----RLELQLRYNGVG---RVTSSGPVINHGMWQTISVEEL 131 (422) T ss_dssp CCEEEEEEEECC-SSEEEEEEESC-TTSEEEEEEEETT-----EEEEEEEETTEE---EEEEEEEECCSSCCEEEEEEEC T ss_pred cEEEEEEEEeCC-CCeEEEEeCCC-CCCCEEEEEEECC-----EEEEEEECCCCc---eEEeCCceecCCCCEEEEEEEc Confidence 788888888765 45788877765 3456888888754 277777654321 2223355778999999999999 Q ss_pred cCeEEEEEccccceeeeeecCCcccccC-CCceEEEeecccc-------cCCccccceEeEEEe Q FBpp0308937 167 SDKVSFYYDCELRNTTLVTREPIELVFD-SASTLYIGQAGSI-------IGGKFEGYLEKINVY 222 (973) Q Consensus 167 g~~VtLyVDC~~~~t~~l~r~~~~l~~~-~~~~l~IGq~g~~-------~~~~F~G~LQ~Lri~ 222 (973) +..++|+||-..+.+...+.....+... ....||||-.-.. ....|.|=|++|+|+ T Consensus 132 ~~~~~l~vD~~~~~~~~~~g~~~~l~~~~~~~~lyvGG~p~~~~~~~~~~~~~F~GCi~~l~~~ 195 (422) T 1h30_A 132 ARNLVIKVNRDAVMKIAVAGDLFQPERGLYHLNLTVGGIPFHEKDLVQPINPRLDGCMRSWNWL 195 (422) T ss_dssp SSEEEEEETTEEEEEEECCSCSSEEETTEEECEEEESSCSSCGGGSSSCCCCCCCEEEEEEEEC T ss_pred CCEEEEEECCcceEeeecCCcccccccCcccceEEEecccCcccccccccCCCCCEEeeeeEEc Confidence 9999999998655433333332222200 1357999864211 124699999999963No 34>2jd4_A Laminin subunit alpha-1; basement membrane protein, metal binding protein; 1.9A {Mus musculus} SCOP: b.29.1.0 Probab=97.49 E-value=0.0021 Score=73.00 Aligned_cols=125 Identities=16% Similarity=0.267 Sum_probs=82.2 Q ss_pred ceEEEEEeeccCCCCceEEEEEcCCCCeEEEEEEEcccccCceeEEEEEEecccccceeeeeeecccCCCceEEEEEEEe Q FBpp0308937 87 EFAILITFRQSSLKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLASFGVAHVPDKWNSIALQVL 166 (973) Q Consensus 87 eFSllaT~R~~~~~~g~LfsI~~~~~~~~qlgl~lsg~~~~~~~i~L~Y~~~~~~~~q~~~sF~v~l~dg~WHrlaLsV~ 166 (973) +|+|.+.||.... .+.||-..+. +...+|.|.|..- .+.|.|.-..+. ..+.....+.|++||+|.|... T Consensus 44 ~~~is~~frT~~~-~GlLl~~~~~-~~~d~~~l~L~~G-----~l~~~~~~g~~~---~~~~~~~~v~Dg~WH~V~v~r~ 113 (383) T 2jd4_A 44 RLQVQLSIRTFAS-SGLIYYVAHQ-NQMDYATLQLQEG-----RLHFMFDLGKGR---TKVSHPALLSDGKWHTVKTEYI 113 (383) T ss_dssp EEEEEEEEEECCS-CEEEEEEECT-TSSSEEEEEEETT-----EEEEEEECSSCE---EEEECCCCCTTSSCEEEEEEEE T ss_pred ceEEEEEEEeCCC-CeEEEEeCCC-CCCcEEEEEEECC-----EEEEEEECCCCe---EEEeCCccccCCCCEEEEEEEE Confidence 7888899987554 4677766653 2355777777643 277777643321 2333356678999999999999 Q ss_pred cCeEEEEEccccceeeeeecCCcccccCCCceEEEeecccc--------cCCccccceEeEEEec Q FBpp0308937 167 SDKVSFYYDCELRNTTLVTREPIELVFDSASTLYIGQAGSI--------IGGKFEGYLEKINVYG 223 (973) Q Consensus 167 g~~VtLyVDC~~~~t~~l~r~~~~l~~~~~~~l~IGq~g~~--------~~~~F~G~LQ~Lri~~ 223 (973) +..++|+||-........+.....| +....||||-.-.. ....|.|-|++|+|.. T Consensus 114 ~~~~~L~vD~~~~~~~~~~~~~~~l--~~~~~l~iGG~p~~~~~~~~~~~~~~F~GCi~~l~in~ 176 (383) T 2jd4_A 114 KRKAFMTVDGQESPSVTVVGKATTL--DVERKLYLGGLPSHYRARNIGTITHSIPACIGEIMVNG 176 (383) T ss_dssp TTEEEEEETTEECCCEECCSSCCCC--CCCSEEEESSCCTTCCCCSSCSCCSBCCEEEEEEEETT T ss_pred CCEEEEEEeCCccceeecCCCCcee--cCCCCEEEeCcCccccccccccccCCeeeEeeeEEECC Confidence 9999999997654433322222233 33467999854210 1246999999999864No 35>4dqa_A Uncharacterized protein; two domains structure, DUF 1735, laminin_G_3 concanavalin A- lectin/glucanases superfamily domain; HET: MSE; 1.50A {Bacteroides ovatus} Probab=97.42 E-value=0.0019 Score=72.97 Aligned_cols=152 Identities=13% Similarity=0.124 Sum_probs=90.2 Q ss_pred CcceEecCCcccCCcchhcccccccceEEEEEeeccCCC-CceEEEEEcCCCCeEEEEEEEcccccCc-eeEEEEEEecc Q FBpp0308937 62 FPAFRFLQTADVKSPYRMLLPEKLYEFAILITFRQSSLK-GGYLFSVVNPLDTVVQLGVHLSPVVKNS-YNVSLVYTQAD 139 (973) Q Consensus 62 ~pAy~f~~~a~l~~pt~~lfp~~~~eFSllaT~R~~~~~-~g~LfsI~~~~~~~~qlgl~lsg~~~~~-~~i~L~Y~~~~ 139 (973) ..|++|.. ..+.++.... ....+|+|.+++|+.... ...||+. ++. |.+++.....+. ..-.|.+... T Consensus 140 ~~al~f~G-~yi~v~~~~~--~~~~~fTi~~Wvk~~~~~~~~~i~g~----~g~--~~l~~~~~~~gi~~~~~l~~~g~- 209 (355) T 4dqa_A 140 TKAGNFSN-HYISVKFPVG--TFFSSFTYEALINVDYFLDNNTIMGT----EGV--MILRIGDAGGGITPKDYLEVAGG- 209 (355) T ss_dssp CEEEEEES-CCEEECCCTT--CCBSSEEEEEEEEESCCCSSEEEEEE----TTT--EEEEEEEGGGTSEEEEEEEEEES- T ss_pred ccccccCC-ceEEecCCCC--CCccCEEEEEEEEccccCCcceEEcC----CCc--EEEEecCCCcCcCcCCEEEEcCC- Confidence 44666664 3333332211 122399999999997654 3455542 222 334443211000 0122333221 Q ss_pred cccceeeeeeecccCCCceEEEEEEEe--cCeEEEEEccccceeeeeecCCcccccCCCceEEEeecccc--cCCccccc Q FBpp0308937 140 QNIGRKLASFGVAHVPDKWNSIALQVL--SDKVSFYYDCELRNTTLVTREPIELVFDSASTLYIGQAGSI--IGGKFEGY 215 (973) Q Consensus 140 ~~~~q~~~sF~v~l~dg~WHrlaLsV~--g~~VtLyVDC~~~~t~~l~r~~~~l~~~~~~~l~IGq~g~~--~~~~F~G~ 215 (973) . + +.-...+.+++||+|++... +..++||||.+++.+......... +.....++||+.... ....|.|. T Consensus 210 --~--~-~~s~~~~~~~~W~Hva~t~d~~~~~~~lYvnG~~~~~~~~~~~~~~--~~~~~~l~IG~~~~~~~~~~~f~G~ 282 (355) T 4dqa_A 210 --Q--N-YRVTKPLLTNRWYHVALTYDQPTGKTGIYVNGEKWAGSDWGIDGFD--PNSDMGFYIGRIYGFKWGERPFHGK 282 (355) T ss_dssp --S--C-EECSSCCCSSCEEEEEEEEETTTTEEEEEETTEEEEEEECCCCCBC--TTSTTCEEESCCTTCTTCCCCCEEE T ss_pred --C--c-cccCCccCCCCEEEEEEEEECCCCEEEEEECCEEEeEEEcCCCccc--cCCCceEEEcCCCCCCCCCccceEE Confidence 1 1 11234567899999999999 899999999999887654433222 223467999986321 24689999 Q ss_pred eEeEEEecCCccccc Q FBpp0308937 216 LEKINVYGNPDAINV 230 (973) Q Consensus 216 LQ~Lri~~dP~~~~~ 230 (973) |.++||+.......+ T Consensus 283 idevri~~~aLs~~e 297 (355) T 4dqa_A 283 MSEVRVWSVARTENQ 297 (355) T ss_dssp EEEEEEESSCCCHHH T ss_pred EEEEEEECCCCCHHH Confidence 999999988765544No 36>2wjs_A Laminin subunit alpha-2; integrin, secreted, coiled coil, glycoprotein, laminin EGF-like domain, extracellular matrix, laminin G-like domain; HET: NAG; 2.80A {Mus musculus} Probab=97.35 E-value=0.0018 Score=78.34 Aligned_cols=124 Identities=13% Similarity=0.160 Sum_probs=78.1 Q ss_pred ceEEEEEeeccCCCCceEEEEEcCCCCeEEEEEEEcccccCceeEEEEEEecccccceeee--eeecccCCCceEEEEEE Q FBpp0308937 87 EFAILITFRQSSLKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLA--SFGVAHVPDKWNSIALQ 164 (973) Q Consensus 87 eFSllaT~R~~~~~~g~LfsI~~~~~~~~qlgl~lsg~~~~~~~i~L~Y~~~~~~~~q~~~--sF~v~l~dg~WHrlaLs 164 (973) ++.|.+.||.. ...+.||.+.+. ...+|.|.|..- + +.|.|....+.. ..++ .....+.||+||+|.|. T Consensus 408 ~~~i~~~FRT~-~~~GlLl~~~~~--~~~~l~l~L~~G---~--l~~~~~~g~~~~-~~~~~~~~~~~l~DG~WH~V~l~ 478 (608) T 2wjs_A 408 GTEINLSFSTR-NESGIILLGSGG--GQAYYAIFLNKG---R--LEVHLSSGTRTM-RKIVIKPEPNRFHDGREHSVHVE 478 (608) T ss_dssp TEEEEEEEEES-CSSEEEEEEC-----CCEEEEEEETT---E--EEEEEEC----C-EEEEECCCSSCSSSSSCEEEEEE T ss_pred CcEEEEEEEeC-CCceEEEEEcCC--CCCEEEEEEECC---E--EEEEEECCCCce-eeEEEecCCcccCCCCEEEEEEE Confidence 67777788765 456788866543 244677777633 2 677775433221 1122 23567889999999999 Q ss_pred EecCeEEEEEccccceeeeeecCCcccccCCCceEEEeecccc-------cCCccccceEeEEEec Q FBpp0308937 165 VLSDKVSFYYDCELRNTTLVTREPIELVFDSASTLYIGQAGSI-------IGGKFEGYLEKINVYG 223 (973) Q Consensus 165 V~g~~VtLyVDC~~~~t~~l~r~~~~l~~~~~~~l~IGq~g~~-------~~~~F~G~LQ~Lri~~ 223 (973) ..+..++|+||.....+..+... ..+ +. ..||||..-.. ....|+|=|++|+|-. T Consensus 479 ~~~~~~~L~VD~~~~~~~~~~~~-~~l--~~-~~lylGG~p~~~~~~~~~~~~~F~GCi~~v~in~ 540 (608) T 2wjs_A 479 RTRGIFTVQIDEDRRHMQNLTEE-QPI--EV-KKLFVGGAPPEFQPSPLRNIPAFQGCVWNLVINS 540 (608) T ss_dssp ECSSEEEEEESSSCCEEEECCCC-SCB--CC-SCEEESCCCC--------CCCCCCEEEEEEEETT T ss_pred EeCCEEEEEECCCcceeeccCCC-ccc--cc-ccEEEeCCCccccccccccCCCCEEEcCeeEECC Confidence 99999999999987654433322 222 22 36999875211 1246999999999953No 37>1dyk_A Laminin alpha 2 chain; metal binding protein; 2.0A {Mus musculus} SCOP: b.29.1.4 b.29.1.4 PDB: 1okq_A 1qu0_A Probab=97.33 E-value=0.0031 Score=71.92 Aligned_cols=126 Identities=15% Similarity=0.231 Sum_probs=82.4 Q ss_pred ceEEEEEeeccCCCCceEEEEEcCCCCeEEEEEEEcccccCceeEEEEEEecccccceeeeeeecccCCCceEEEEEEEe Q FBpp0308937 87 EFAILITFRQSSLKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLASFGVAHVPDKWNSIALQVL 166 (973) Q Consensus 87 eFSllaT~R~~~~~~g~LfsI~~~~~~~~qlgl~lsg~~~~~~~i~L~Y~~~~~~~~q~~~sF~v~l~dg~WHrlaLsV~ 166 (973) +|+|.+.||... ..+.||-..+. +...+|.|.|..- .+.|.|....+. ..+.....+.|++||+|.|... T Consensus 58 ~~~is~~frT~~-~~GlLl~~~~~-~~~d~~~l~l~~G-----~l~~~~~~g~g~---~~~~~~~~~nDg~WH~V~v~~~ 127 (394) T 1dyk_A 58 RLTIELEVRTEA-ESGLLFYMARI-NHADFATVQLRNG-----FPYFSYDLGSGD---TSTMIPTKINDGQWHKIKIVRV 127 (394) T ss_dssp EEEEEEEEEECC-SCEEEEEEECT-TSSSEEEEEEETT-----EEEEEEESSSCE---EEEECCSCCCSSSCEEEEEEEE T ss_pred ceEEEEEEEECC-CCeEEEEeCCC-CCCCeEEEEEECC-----EEEEEEECCCCc---EEEEecceecCCCeEEEEEEEe Confidence 788888899754 44677766553 3456777777643 277777643321 2333456778999999999999 Q ss_pred cCeEEEEEccccceeeeeecCCcccccCCCceEEEeecccc--------cCCccccceEeEEEecCC Q FBpp0308937 167 SDKVSFYYDCELRNTTLVTREPIELVFDSASTLYIGQAGSI--------IGGKFEGYLEKINVYGNP 225 (973) Q Consensus 167 g~~VtLyVDC~~~~t~~l~r~~~~l~~~~~~~l~IGq~g~~--------~~~~F~G~LQ~Lri~~dP 225 (973) +..++|+||-....... +..... ++....||||-.-.. ....|.|-|++|+|...+ T Consensus 128 ~~~~~L~vD~~~~~~~~-~~~~~~--l~~~~~l~lGG~p~~~~~~~~~~~~~~F~GCi~~l~in~~~ 191 (394) T 1dyk_A 128 KQEGILYVDDASSQTIS-PKKADI--LDVVGILYVGGLPINYTTRRIGPVTYSLDGCVRNLHMEQAP 191 (394) T ss_dssp TTEEEEEETTEEEEEEC-STTCCC--CCCCSEEEESSCCTTCCCCSSCSCCSBCSEEEEEEEESSSC T ss_pred CCEEEEEECCcccccCc-CCCCcc--ccCCCceEEcccCCcccccccccCCCCceEEeeEEEECCEE Confidence 99999999976543322 221122 233567999864211 013599999999986443No 38>2jkb_A Sialidase B; intramolecular trans-sialidase, lyase, glycosidase, neuraminidase; HET: SKD; 1.54A {Streptococcus pneumoniae} PDB: 2vw2_A* 2vw1_A* 2vw0_A* 4foq_A 4fov_A* 4fow_A 4foy_A* 4fp2_A* 4fp3_A* 4fpc_A* 4fpe_A* 4fpf_A* 4fpg_A* 4fph_A* 4fpj_A* 4fpk_A* 4fpl_A* 4fpo_B* 4fpy_A* 4fq4_A* Probab=97.26 E-value=0.0025 Score=78.39 Aligned_cols=162 Identities=10% Similarity=0.075 Sum_probs=99.1 Q ss_pred CcceEecCCcccCCcchhcccccc--cceEEEEEeeccC-CCCceEEEEEcCCC--CeEEEEEEEcccccCceeEEEEEE Q FBpp0308937 62 FPAFRFLQTADVKSPYRMLLPEKL--YEFAILITFRQSS-LKGGYLFSVVNPLD--TVVQLGVHLSPVVKNSYNVSLVYT 136 (973) Q Consensus 62 ~pAy~f~~~a~l~~pt~~lfp~~~--~eFSllaT~R~~~-~~~g~LfsI~~~~~--~~~qlgl~lsg~~~~~~~i~L~Y~ 136 (973) ..|+.|.... +.++... -..+ .+|+|.++||+.. .+...||+..+... ...+|.|.+... ++ +.|... T Consensus 34 g~a~~fdG~~-v~l~~~~--~~~l~~~~fTv~~Wvk~~~~~~~~~lfs~~~~~~~~~~~~~~l~~~~~--g~--~~~~~~ 106 (686) T 2jkb_A 34 GGSYQLNNKS-IDISSLL--LDKLSGESQTVVMKFKADKPNSLQALFGLSNSKAGFKNNYFSIFMRDS--GE--IGVEIR 106 (686) T ss_dssp EEEEEEESSC-EECHHHH--GGGCCSSCEEEEEEEECSSCCSEEEEEEEECCSTTCTTCEEEEEEETT--SC--EEEEEE T ss_pred cceEEecCce-EECchhc--cccCCCCCeEEEEEEEeCCCCCCCEEEEecCCCCCCccccEEEEEeCC--Ce--EEEEEE Confidence 3588886543 4444333 2345 5999999999975 45567999986421 235677777542 22 556655 Q ss_pred ecccccceeeeeeecc-----cCCCceEEEEEEEec--CeEEEEEccccceeeeeecCCcccccCCCceEEEeeccc--c Q FBpp0308937 137 QADQNIGRKLASFGVA-----HVPDKWNSIALQVLS--DKVSFYYDCELRNTTLVTREPIELVFDSASTLYIGQAGS--I 207 (973) Q Consensus 137 ~~~~~~~q~~~sF~v~-----l~dg~WHrlaLsV~g--~~VtLyVDC~~~~t~~l~r~~~~l~~~~~~~l~IGq~g~--~ 207 (973) ..+.... ..+..... ..+++||+|++...+ ..++||||-+++.+.........-.+.....|+||+... . T Consensus 107 ~~~~~~~-~~~~~~~~~~~~~~~~g~W~Hva~t~d~~~g~~~lYvnG~~~~~~~~~~~~~~~~~~~~~~~~IG~~~~~g~ 185 (686) T 2jkb_A 107 DAQKGIN-YLFSRPASLWGKHKGQAVENTLVFVSDSKDKTYTMYVNGIEVFSETVDTFLPISNINGIDKATLGAVNREGK 185 (686) T ss_dssp ETTTTEE-EEEEESSCCCCEETTEECCEEEEEEEETTTTEEEEEETTEEEEEEECSSCCCGGGSTTCCEEEESSEEETTE T ss_pred eCCCcee-EEeeccccccccccCCCCeEEEEEEEECCCCeEEEEECCEEEEeeccccceecccCCCCceEEECCeecCCC Confidence 4332211 11111111 125899999999976 489999999998876553321100122235799998421 1 Q ss_pred cCCccccceEeEEEecCCcccccc Q FBpp0308937 208 IGGKFEGYLEKINVYGNPDAINVT 231 (973) Q Consensus 208 ~~~~F~G~LQ~Lri~~dP~~~~~~ 231 (973) ....|.|.|.+|+|+..+....++ T Consensus 186 ~~~~f~G~Idev~i~~~aLs~~eI 209 (686) T 2jkb_A 186 EHYLAKGSIDEISLFNKAISDQEV 209 (686) T ss_dssp EESCCEEEEEEEEEESSCCCHHHH T ss_pred ccccccceEEEEEEecccCCHHHH Confidence 123499999999999877665553No 39>1a8d_A Tetanus neurotoxin; clostridial, ganglioside binding region; 1.57A {Clostridium tetani} SCOP: b.29.1.6 b.42.4.2 PDB: 1af9_A 1fv3_A* 1fv2_A* 3hmy_A* 3hn1_A* 1d0h_A* 1dfq_A* 1dll_A* 1yxw_A* 1yyn_A* 1diw_A* Probab=97.23 E-value=0.011 Score=69.16 Aligned_cols=167 Identities=10% Similarity=0.156 Sum_probs=94.8 Q ss_pred CceEEeccCCCCcceEecCCcc----cCCcchhccccccc-ceEEEEEeeccCCC-C------ceEEEEEcCCC-----C Q FBpp0308937 51 AGIEFGEAEDGFPAFRFLQTAD----VKSPYRMLLPEKLY-EFAILITFRQSSLK-G------GYLFSVVNPLD-----T 113 (973) Q Consensus 51 ~GV~~v~G~d~~pAy~f~~~a~----l~~pt~~lfp~~~~-eFSllaT~R~~~~~-~------g~LfsI~~~~~-----~ 113 (973) .+++++.|.. ..|+.|..... +.++.. ++...+. +|||.+++|+.... . .-+++|.+..+ . T Consensus 47 G~vs~v~G~~-GkAl~fdG~~~S~~~V~lp~~-ll~~~~~~sFTISfWVK~~~~~t~~~~~y~~g~~~Ii~~~~~~w~~~ 124 (452) T 1a8d_A 47 PDAQLVPGIN-GKAIHLVNNESSEVIVHKAMD-IEYNDMFNNFTVSFWLRVPKVSASHLEQYGTNEYSIISSMKKHSLSI 124 (452) T ss_dssp TTCEEEECSS-SEEEEEESSTTCCEEEECCGG-GTTTTTTSCEEEEEEEECCCCCHHHHHHHTTCEEEEEECCEECGGGC T ss_pred CCceecCCcc-cceEEEcCCCCceEEEecCch-hcccCCCCCEEEEEEEeccccCcccccccccCceEEEeccCcccccC Confidence 4567776644 46899986532 444433 3333344 99999999997653 1 22344543321 1 Q ss_pred eEEEEEEEcccccCceeEEEEEEecccccceeeeee-----ecc-cCCCceEEEEEEEe-cCeEEEEEccccceeeeeec Q FBpp0308937 114 VVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLASF-----GVA-HVPDKWNSIALQVL-SDKVSFYYDCELRNTTLVTR 186 (973) Q Consensus 114 ~~qlgl~lsg~~~~~~~i~L~Y~~~~~~~~q~~~sF-----~v~-l~dg~WHrlaLsV~-g~~VtLyVDC~~~~t~~l~r 186 (973) ...+.|.+... .+.|......+.. +...| .++ ..+++||+|++.+. ...++||||-+++.+..+.. T Consensus 125 ~~G~~i~l~~g-----~l~f~~~~~~G~~--~~i~~~~~~~~i~~v~~g~W~HVAvT~D~~~~~~lYVNG~lv~~~~~~~ 197 (452) T 1a8d_A 125 GSGWSVSLKGN-----NLIWTLKDSAGEV--RQITFRDLPDKFNAYLANKWVFITITNDRLSSANLYINGVLMGSAEITG 197 (452) T ss_dssp EEEEEEEEETT-----EEEEEEECTTSCE--EEEEEECCSBTTSCSSSSSCEEEEEEECTTSEEEEEETTEEEEEEECTT T ss_pred CCCcEEEEcCC-----eEEEEEEeCCCCc--ceeEeeccccccCcCCCCceEEEEEEEeCCCCEEEeECCEEeeeecccc Confidence 33455544322 2444444322211 22211 222 23799999999998 45679999999887764432 Q ss_pred CCcccccCCCceEEEeecccccCCccccceEeEEEecCCccccc Q FBpp0308937 187 EPIELVFDSASTLYIGQAGSIIGGKFEGYLEKINVYGNPDAINV 230 (973) Q Consensus 187 ~~~~l~~~~~~~l~IGq~g~~~~~~F~G~LQ~Lri~~dP~~~~~ 230 (973) . ..+ .....+.|+.... ....|.|.|.+|||+-.+..+.+ T Consensus 198 ~-~~i--~~~~~~~lgiG~~-~d~~f~G~IDEvRIynrALS~~E 237 (452) T 1a8d_A 198 L-GAI--REDNNITLKLDRC-NNNNQYVSIDKFRIFCKALNPKE 237 (452) T ss_dssp C-CCC--CCCSEEEEEEESC-CCTTCEEEEEEEEEESSCCCHHH T ss_pred c-ccc--ccCCeEEEEEccC-CCCCCcEEEEEEEEECCcCCHHH Confidence 1 111 2223445544211 23469999999999988765444No 40>1h30_A GAS6, growth-arrest-specific protein; laminin G-domain protein, vitamin K-dependent protein, AXL/SKY/MER ligand, laminin G- like domain; 2.2A {Homo sapiens} SCOP: b.29.1.4 b.29.1.4 PDB: 2c5d_A* 4ra0_A* Probab=97.13 E-value=0.0022 Score=73.94 Aligned_cols=128 Identities=15% Similarity=0.218 Sum_probs=79.6 Q ss_pred ceEEEEEeeccCCCCceEEEEEcCCCCeEEEEEEEcccc-cCcee---EEEEEEecccccceeeeeeecccCCCceEEEE Q FBpp0308937 87 EFAILITFRQSSLKGGYLFSVVNPLDTVVQLGVHLSPVV-KNSYN---VSLVYTQADQNIGRKLASFGVAHVPDKWNSIA 162 (973) Q Consensus 87 eFSllaT~R~~~~~~g~LfsI~~~~~~~~qlgl~lsg~~-~~~~~---i~L~Y~~~~~~~~q~~~sF~v~l~dg~WHrla 162 (973) +|+|.+.||... ..+.||.+.+......+|.|.|.... ..+++ |.|.+. .+ .+......+.||+||+|. T Consensus 250 ~~~is~~frT~~-~~GlLl~~~~~~~~~d~l~l~L~~g~~~g~l~~~~v~~~~~--~~----~~~~~~~~l~DG~WH~V~ 322 (422) T 1h30_A 250 EVEVVAHIRPAA-DTGVLFALWAPDLRAVPLSVALVDYHSTKKLKKQLVVLAVE--HT----ALALMEIKVCDGQEHVVT 322 (422) T ss_dssp CEEEEEEEEESS-SCEEEEEEEEGGGTEEEEEEEEESCC-----CCCEEEEEET--TE----EEEEEECCTTSSCCEEEE T ss_pred eeEEEEEEEeCC-CCEEEEEEeccCCCcCceEEEEeeccccccccccEEEEEEC--Ce----EEEEeeeeecCCCEEEEE Confidence 788889998764 45788888753234567777765321 11112 555552 21 122345778899999999 Q ss_pred EEEecCeEEEEEccccceeeeeecCCc-c-----cccCCCceEEEeecccc------cCCccccceEeEEEe Q FBpp0308937 163 LQVLSDKVSFYYDCELRNTTLVTREPI-E-----LVFDSASTLYIGQAGSI------IGGKFEGYLEKINVY 222 (973) Q Consensus 163 LsV~g~~VtLyVDC~~~~t~~l~r~~~-~-----l~~~~~~~l~IGq~g~~------~~~~F~G~LQ~Lri~ 222 (973) |......++|+||.....+........ . ..++....||||..-.. ....|+|=|+ |+|- T Consensus 323 l~~~~~~~~L~VD~~~~~~~~~~~~~~~~~~~l~~~l~~~~~lylGG~p~~~~~~~~~~~~F~GCi~-v~in 393 (422) T 1h30_A 323 VSLRDGEATLEVDGTRGQSEVSAAQLQERLAVLERHLRSPVLTFAGGLPDVPVTSAPVTAFYRGCMT-LEVN 393 (422) T ss_dssp EEEETTEEEEEETTEECEESSCHHHHHHHHHHHHHHHTSCCEEEESCCCSCCTTSSSCCSBCCEEEE-EEET T ss_pred EEEECCEEEEEeCCccceeeccccchhhhhhhhhHhhccCccEEEcCcCCCcccccccCCCceEEEE-EEEC Confidence 999999999999998765433211100 0 02345678999975211 1246999995 7764No 41>2vu9_A Botulinum neurotoxin A heavy chain; hydrolase, metalloprotease, ganglioside, metal-B toxin, protease, membrane, receptor, secreted; HET: BGC GAL SIA NGA; 1.6A {Clostridium botulinum} SCOP: b.29.1.6 b.42.4.2 PDB: 2vua_A 4jra_A 3fuo_A 4iqp_A Probab=97.04 E-value=0.015 Score=66.16 Aligned_cols=167 Identities=8% Similarity=0.137 Sum_probs=99.3 Q ss_pred CCceEEeccCCCCcceEecCCc----ccCCcchhccccccc-ceEEEEEeeccCCCCce----EEEEEcCCCCeEEEEEE Q FBpp0308937 50 FAGIEFGEAEDGFPAFRFLQTA----DVKSPYRMLLPEKLY-EFAILITFRQSSLKGGY----LFSVVNPLDTVVQLGVH 120 (973) Q Consensus 50 ~~GV~~v~G~d~~pAy~f~~~a----~l~~pt~~lfp~~~~-eFSllaT~R~~~~~~g~----LfsI~~~~~~~~qlgl~ 120 (973) ...|+++.| -..||.+.... .+. -+..++-+.++ +|||.+++|..+.+..+ .++|.+......-..|- T Consensus 48 ~G~v~~~~G--~g~A~~L~~s~~s~~~v~-~~ndii~n~~~nnFSIsFWvr~~k~~~~~~~~~e~tIIn~k~~NsGW~Is 124 (444) T 2vu9_A 48 GSKVNFDPI--DKNQIQLFNLESSKIEVI-LKNAIVYNSMYENFSTSFWIRIPKYFNSISLNNEYTIINCMENNSGWKVS 124 (444) T ss_dssp CTTEEECSS--CTTCEEEESSTTCCEEEE-CCGGGSCEESSCCEEEEEEEECCCCCSGGGTTCCEEEEEEEETTEEEEEE T ss_pred CCceEEEec--CCcEEEeccCCCceEEEe-cCchhhhccccCceEEEEEEECCCCCcccccCCceEeEeeccCCCCeEEE Confidence 356888887 34588886444 233 34444555666 99999999987666522 45554332222223333 Q ss_pred EcccccCceeEEEEEEecccccceeeeeee------cccCCCceEEEEEEEe-cCeEEEEEccccceeeeeecCCccccc Q FBpp0308937 121 LSPVVKNSYNVSLVYTQADQNIGRKLASFG------VAHVPDKWNSIALQVL-SDKVSFYYDCELRNTTLVTREPIELVF 193 (973) Q Consensus 121 lsg~~~~~~~i~L~Y~~~~~~~~q~~~sF~------v~l~dg~WHrlaLsV~-g~~VtLyVDC~~~~t~~l~r~~~~l~~ 193 (973) +... .+.+...+..+ ..+.+.|. ++-..++||.|+++|. -..+++|+|-+++.+..+...- .+.+ T Consensus 125 l~~n-----~liwtl~dsng--n~k~i~f~y~~~~~I~dyinkW~hVtIt~Drlg~a~IYING~lv~~k~I~~lg-~I~~ 196 (444) T 2vu9_A 125 LNYG-----EIIWTLQDTQE--IKQRVVFKYSQMINISDYINRWIFVTITNNRLNNSKIYINGRLIDQKPISNLG-NIHA 196 (444) T ss_dssp EETT-----EEEEEEECTTS--CEEEEEEECCSBSSSCSSTTSCEEEEEEECTTSEEEEEETTEEEEEEECTTCC-CEEC T ss_pred ECCC-----eEEEEEEecCC--ceeeEEEecccccccccccCceEEEEEEECCCCCEEEEECCEEeeecchhhcc-ceee Confidence 4322 13333333222 23445553 2212399999999999 5677999999999988665532 2222 Q ss_pred CCCceEEEeecccccCCccccceEeEEEecCCccccc Q FBpp0308937 194 DSASTLYIGQAGSIIGGKFEGYLEKINVYGNPDAINV 230 (973) Q Consensus 194 ~~~~~l~IGq~g~~~~~~F~G~LQ~Lri~~dP~~~~~ 230 (973) .....|-|+.. ....+++.|.+|+|+..+-...+ T Consensus 197 sn~i~l~v~~~---~d~~~~~~ID~f~Ifnk~Lt~~E 230 (444) T 2vu9_A 197 SNNIMFKLDGC---RDTHRYIWIKYFNLFDKELNEKE 230 (444) T ss_dssp CSEEEEEEESC---CCTTCEEEEEEEEEESSCCCHHH T ss_pred CCeEEEEeccc---CCCccceeeeeeEEecccCCHHH Confidence 22223333332 33568899999999998865554No 42>3vuo_A NTNHA; protection of botulinum neurotoxin, botulinum neurotoxin, to; 3.90A {Clostridium botulinum} Probab=96.83 E-value=0.019 Score=72.02 Aligned_cols=155 Identities=12% Similarity=0.180 Sum_probs=88.9 Q ss_pred ceEEeccCCCCcceEecCCcc-cCCcchhccccccc-ceEEEEEeeccCC-C-CceEEEEEcCCCCeEEEEEEEcccccC Q FBpp0308937 52 GIEFGEAEDGFPAFRFLQTAD-VKSPYRMLLPEKLY-EFAILITFRQSSL-K-GGYLFSVVNPLDTVVQLGVHLSPVVKN 127 (973) Q Consensus 52 GV~~v~G~d~~pAy~f~~~a~-l~~pt~~lfp~~~~-eFSllaT~R~~~~-~-~g~LfsI~~~~~~~~qlgl~lsg~~~~ 127 (973) +++++.|.. ..|+.|..... +.++... +...+. +|||.+++|+... . ...+|+-.+. ...+.+.+.. + T Consensus 865 ~~sfv~Gv~-GkAL~FDGSd~yV~LPn~l-i~nslt~sFTVSFWVKplg~~T~~t~IIsskdn---nsGw~LsL~~---n 936 (1196) T 3vuo_A 865 SVELVYGVN-GESLYLKSPNETVEFSNNF-FTNGLTNNFTICFWLRFTGKDDDKTRLIGNKVN---NCGWEIYFED---N 936 (1196) T ss_dssp TCEEEECSS-SEEEEECSSSCCEEEECGG-GGCCSSCCEEEEEEEEECCCCSSCEEEEEEECS---SCEEEEEEET---T T ss_pred CceecCCCc-CceeEEcCCCceEEeCCcc-cccCCCCcEEEEEEEccCCCCCccceEEEecCC---CCCcEEEEcC---C Confidence 455665433 44888876433 4333222 222233 8999999999421 1 1236643322 1223344432 2 Q ss_pred ceeEEEEEEecccccceeeeeeecccCCCceEEEEEEEe--cCeEEEEEccccceeeeeecCCcccccCCCceEE-Eeec Q FBpp0308937 128 SYNVSLVYTQADQNIGRKLASFGVAHVPDKWNSIALQVL--SDKVSFYYDCELRNTTLVTREPIELVFDSASTLY-IGQA 204 (973) Q Consensus 128 ~~~i~L~Y~~~~~~~~q~~~sF~v~l~dg~WHrlaLsV~--g~~VtLyVDC~~~~t~~l~r~~~~l~~~~~~~l~-IGq~ 204 (973) + +.+...+..+. .+.+.+. .+..++||+|++.+. +..++||||-+++.+..+.... .+ .....+. +|.. T Consensus 937 t--L~Fsi~Ds~Gn--eqsI~~d-dI~~GkW~HVAVTyDr~G~aLKLYVNGeLVaS~sisgL~-dI--~ssg~IsFIG~n 1008 (1196) T 3vuo_A 937 G--LVFEIIDSNGN--QESVYLS-NVINNNWYYISISVDRLKDQLLIFINDKNVANVSIEQIL-NI--YSTNVISLVNKN 1008 (1196) T ss_dssp E--EEEEEECTTCC--EEEEEEC-SCTTSCCEEEEEEEETTTTEEEEEETTEEEEEEECTTCC-CC--CCCSEEEECCCS T ss_pred c--EEEEEEeCCCc--ceeeecC-CCCCCCEEEEEEEEECCCCEEEEeECCEEccccccccCc-cc--ccCCceeEecCC Confidence 2 44555433322 2333443 456899999999998 6777999999998877544322 21 1123333 4431 Q ss_pred ccccCCccccceEeEEEecCCcccc Q FBpp0308937 205 GSIIGGKFEGYLEKINVYGNPDAIN 229 (973) Q Consensus 205 g~~~~~~F~G~LQ~Lri~~dP~~~~ 229 (973) |.|.|.+|||+..+..+. T Consensus 1009 -------FnG~IDEVRIYNRALSae 1026 (1196) T 3vuo_A 1009 -------NSIYVEELSVLDKPVASE 1026 (1196) T ss_dssp -------SCEEEEEEEEESSCCCHH T ss_pred -------CcEEeeEEEEECCCCCHH Confidence 899999999998775443No 43>2wjs_A Laminin subunit alpha-2; integrin, secreted, coiled coil, glycoprotein, laminin EGF-like domain, extracellular matrix, laminin G-like domain; HET: NAG; 2.80A {Mus musculus} Probab=96.77 E-value=0.019 Score=69.45 Aligned_cols=126 Identities=17% Similarity=0.262 Sum_probs=79.9 Q ss_pred ceEEEEEeeccCCCCceEEEEEcCCCCeEEEEEEEcccccCceeEEEEEEecccccceeeeeeecccCCCceEEEEEEEe Q FBpp0308937 87 EFAILITFRQSSLKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLASFGVAHVPDKWNSIALQVL 166 (973) Q Consensus 87 eFSllaT~R~~~~~~g~LfsI~~~~~~~~qlgl~lsg~~~~~~~i~L~Y~~~~~~~~q~~~sF~v~l~dg~WHrlaLsV~ 166 (973) .++|.+.||.. ...+.||...+. +...+|.|.|..- .+.|.|.-..+. ..+.-...+.|++||+|.|... T Consensus 226 ~~~isl~FrT~-~~~GlLl~~~~~-~~~d~l~L~L~~G-----~l~~~~~~g~~~---~~l~~~~~lnDg~WH~V~v~~~ 295 (608) T 2wjs_A 226 ISTVMFKFRTF-SSSALLMYLATR-DLKDFMSVELSDG-----HVKVSYDLGSGM---TSVVSNQNHNDGKWKAFTLSRI 295 (608) T ss_dssp EEEEEEEEEES-CSEEEEEEEECT-TSSSEEEEEEETT-----EEEEEEECSSCE---EEEEEEEECCSSSCEEEEEEEE T ss_pred cceEEEEEEeC-CCCeEEEEecCC-CCCceEEEEEECC-----EEEEEEECCCCc---eEeecCccccCCCeEEEEEEEc Confidence 46777777754 456788877764 3456777777643 277777543221 2223355678999999999999 Q ss_pred cCeEEEEE-ccccceeee----eecCCcccccCCCceEEEeeccc-------ccCCccccceEeEEEe Q FBpp0308937 167 SDKVSFYY-DCELRNTTL----VTREPIELVFDSASTLYIGQAGS-------IIGGKFEGYLEKINVY 222 (973) Q Consensus 167 g~~VtLyV-DC~~~~t~~----l~r~~~~l~~~~~~~l~IGq~g~-------~~~~~F~G~LQ~Lri~ 222 (973) +..++|.| ||....... .+.....+.+.....||||-.-. .....|.|=|++|+|- T Consensus 296 ~~~~~l~vdd~~~~~~~~~~~~~~g~~~~l~l~~~~~lylGG~p~~~~~~~~~~~~~F~GCi~~v~in 363 (608) T 2wjs_A 296 QKQANISIVDIDSNQEENVATSSSGNNFGLDLKADDKIYFGGLPTLRNLRPEVNVKKYSGCLKDIEIS 363 (608) T ss_dssp TTEEEEEEEETTTCCEEEEEEECCSSCCCCCCCTTCEEEESCCCCCSCCCTTCCCCCCEEEEEEEEET T ss_pred ccEEEEEEEeccCCcccccccccCCcccccccCCCceEEEcCcccccccCccccccCcCccccccEEC Confidence 99999998 665432211 11122233343457899995421 1123699999999884No 44>3v0a_B NTNH; botulinum neurotoxin, toxin, neurotoxin associated protein, progenitor toxin complex, VHH bound interlocked complex; HET: MES; 2.70A {Clostridium botulinum} PDB: 3v0b_B Probab=96.73 E-value=0.022 Score=71.47 Aligned_cols=156 Identities=12% Similarity=0.167 Sum_probs=88.8 Q ss_pred ceEEeccCCCCcceEecCCcc-cCCcchhccccccc-ceEEEEEeeccC-CC-CceEEEEEcCCCCeEEEEEEEcccccC Q FBpp0308937 52 GIEFGEAEDGFPAFRFLQTAD-VKSPYRMLLPEKLY-EFAILITFRQSS-LK-GGYLFSVVNPLDTVVQLGVHLSPVVKN 127 (973) Q Consensus 52 GV~~v~G~d~~pAy~f~~~a~-l~~pt~~lfp~~~~-eFSllaT~R~~~-~~-~g~LfsI~~~~~~~~qlgl~lsg~~~~ 127 (973) +++++.|..+ .|+.|..... +.++...++ ..+. +|||.+++|+.. .. ...+|+-.+... . +.+.+.. + T Consensus 868 ~~sfvdGv~G-kAL~FDGSs~yV~LPn~li~-nS~tdsFTVSFWVK~lge~Ta~ttIISs~dnns-G--WeIsL~n---n 939 (1196) T 3v0a_B 868 DIGLVYGINS-DALYLNGSNQSISFSNDFFE-NGLTNSFSIYFWLRNLGKDTIKSKLIGSKEDNC-G--WEIYFQD---T 939 (1196) T ss_dssp TCEEEECSSS-EEEEECSSSCCEEEECGGGG-CCSSCCEEEEEEEEECCCCCSCEEEEEEEETTE-E--EEEEEET---T T ss_pred CceecCCCcC-ceEEEcCCccEEECCCcccc-cCCCCcEEEEEEeccCCccCccceEEecCCCCC-C--ceEEEcC---C Confidence 4666665433 5888886443 333333322 1223 899999999951 11 123664433211 1 2333332 2 Q ss_pred ceeEEEEEEecccccceeeeeeecccCCCceEEEEEEEe--cCeEEEEEccccceeeeeecCCcccccCCCceEE-Eeec Q FBpp0308937 128 SYNVSLVYTQADQNIGRKLASFGVAHVPDKWNSIALQVL--SDKVSFYYDCELRNTTLVTREPIELVFDSASTLY-IGQA 204 (973) Q Consensus 128 ~~~i~L~Y~~~~~~~~q~~~sF~v~l~dg~WHrlaLsV~--g~~VtLyVDC~~~~t~~l~r~~~~l~~~~~~~l~-IGq~ 204 (973) + +.+...+..+. .+.+.|. ++..++||+|++.+. +..+.||||-+++.+..+.... .+ ..+..+. +|. T Consensus 940 ~--L~Ws~~DsnGn--~ksI~~D-dI~~GkW~HVAITyDrsG~aVKLYINGeLVas~sisgll-dI--~ssg~IsFIG~- 1010 (1196) T 3v0a_B 940 G--LVFNMIDSNGN--EKNIYLS-DVSNNSWHYITISVDRLKEQLLIFIDDNLVANESIKEIL-NI--YSSNIISLLSE- 1010 (1196) T ss_dssp E--EEEEEECTTCC--EEEEEEC-SCCSSSCEEEEEEEETTTTEEEEEETTEEEEEEECTTCC-CC--CCCSEEEECCT- T ss_pred c--eEEEEEeCCCc--cceeecc-CCCCCCeEEEEEEEeCCCCEEEEeECCEEccccccccCc-cc--ccCCceeEecc- Confidence 2 44444433322 1334443 456899999999998 5667999999998876444322 11 1223343 332 Q ss_pred ccccCCccccceEeEEEecCCccccc Q FBpp0308937 205 GSIIGGKFEGYLEKINVYGNPDAINV 230 (973) Q Consensus 205 g~~~~~~F~G~LQ~Lri~~dP~~~~~ 230 (973) .|.|.|.+|||+..+..+.+ T Consensus 1011 ------nFnG~IDEVRIYNRALSaeE 1030 (1196) T 3v0a_B 1011 ------NNPSYIEGLTILNKPTTSQE 1030 (1196) T ss_dssp ------TCCEEEEEEEEESSCCCHHH T ss_pred ------cCCcEeeeEEEECCcCCHHH Confidence 18999999999987754443No 45>3pme_A Type C neurotoxin; structural genomics, seattle structural genomics center for infectious disease, ssgcid, botulinum neurotoxin; 1.56A {Clostridium botulinum} SCOP: b.29.1.0 b.42.4.0 PDB: 4f83_A* 3ogg_A 3n7j_A 3obr_A 3obt_A* 3rmx_A 3rmy_A Probab=96.66 E-value=0.034 Score=63.18 Aligned_cols=166 Identities=12% Similarity=0.186 Sum_probs=97.0 Q ss_pred CceEEeccCCCCcceEecCCcc---cCCcchhccccccc-ceEEEEEeeccCCCC--ceEEEEEcCCCCeEEEEEEEccc Q FBpp0308937 51 AGIEFGEAEDGFPAFRFLQTAD---VKSPYRMLLPEKLY-EFAILITFRQSSLKG--GYLFSVVNPLDTVVQLGVHLSPV 124 (973) Q Consensus 51 ~GV~~v~G~d~~pAy~f~~~a~---l~~pt~~lfp~~~~-eFSllaT~R~~~~~~--g~LfsI~~~~~~~~qlgl~lsg~ 124 (973) ..|+++.| -..||.|..... +.+ +..++-..++ +|||.+++|..+... --.++|.+......-..|-+... T Consensus 31 G~v~~~~G--~g~A~~L~gs~~~~~i~~-~ndii~n~~~nsFSIsFWvr~~k~~t~~~~~~tIin~k~~nsGW~Isl~~n 107 (420) T 3pme_A 31 GDVQVNTI--YTNDFKLSSSGDKIIVNL-NNNILYSAIYENSSVSFWIKISKDLTNSHNEYTIINSIKQNSGWKLCIRNG 107 (420) T ss_dssp SCCEESSS--STTEEEECSTTCEEEEEC-CGGGGSSGGGTEEEEEEEEEECHHHHTCCSEEEEEEEEETTEEEEEEEETT T ss_pred CceEEEec--CCcEEEecCCCccEEEec-CcchhhccccCceEEEEEEECCCccccCCCceEeEeeccCCCCeEEEECCC Confidence 45777777 467888876555 333 3444555666 999999999865411 22344433221222233333322 Q ss_pred ccCceeEEEEEEecccccceeeeeee------cccCCCceEEEEEEEe-cCeEEEEEccccceeeeeecCCcccccCCCc Q FBpp0308937 125 VKNSYNVSLVYTQADQNIGRKLASFG------VAHVPDKWNSIALQVL-SDKVSFYYDCELRNTTLVTREPIELVFDSAS 197 (973) Q Consensus 125 ~~~~~~i~L~Y~~~~~~~~q~~~sF~------v~l~dg~WHrlaLsV~-g~~VtLyVDC~~~~t~~l~r~~~~l~~~~~~ 197 (973) .+.+...+..+ ..+...|. ++-..++||.|+++|. -..+++|+|-+++.+..+.... .+ ..+. T Consensus 108 -----~liw~l~dsng--n~~~i~f~y~~~~~I~d~~nkW~~VtIs~Drlg~~~IYING~lv~sk~I~~lg-~I--~~sn 177 (420) T 3pme_A 108 -----NIEWILQDINR--KYKSLIFDYSESLSHTGYTNKWFFVTITNNIMGYMKLYINGELKQSERIEDLD-EV--KLDK 177 (420) T ss_dssp -----EEEEEEECTTS--CEEEEEEECSTTTCTTSCTTSCEEEEEEEETTSEEEEEETTEEEEEEECTTSC-CC--CCCS T ss_pred -----eEEEEEEecCC--ceeeEEEecccccccccccCceEEEEEEECCCCCEEEEECCEEeeecchhhcc-cc--ccCC Confidence 13333333222 23445553 2212399999999999 5677999999999888665431 11 1223 Q ss_pred eEEEeecccccCCccccceEeEEEecCCccccc Q FBpp0308937 198 TLYIGQAGSIIGGKFEGYLEKINVYGNPDAINV 230 (973) Q Consensus 198 ~l~IGq~g~~~~~~F~G~LQ~Lri~~dP~~~~~ 230 (973) .+-++-.+ .....+++.|.+|+|+..+-...+ T Consensus 178 ~i~l~v~~-~~d~~~~~~Id~f~Ifnk~Lt~~E 209 (420) T 3pme_A 178 TIVFGIDE-NIDENQMLWIRDFNIFSKELSNED 209 (420) T ss_dssp EEEESCCS-CCCTTCCEEEEEEEEESSCCCHHH T ss_pred eEEEEEcc-cCCCccceeeeeEEEecccCCHHH Confidence 34444321 233568899999999998865554No 46>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus} Probab=96.60 E-value=0.014 Score=67.10 Aligned_cols=122 Identities=18% Similarity=0.306 Sum_probs=77.5 Q ss_pred ceEEEEEeeccCCCCceEEEEEcCCCCeEEEEEEEcccccCceeEEEEEEecccccceeeee--eecccCCCceEEEEEE Q FBpp0308937 87 EFAILITFRQSSLKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLAS--FGVAHVPDKWNSIALQ 164 (973) Q Consensus 87 eFSllaT~R~~~~~~g~LfsI~~~~~~~~qlgl~lsg~~~~~~~i~L~Y~~~~~~~~q~~~s--F~v~l~dg~WHrlaLs 164 (973) +|+|.+.||.... .+.||-... +...+|.|.|..- .+.|.|....+. ..+. -...+.|++||+|.|. T Consensus 27 ~~~is~~frT~~~-~GlLl~~~~--~~~df~~l~L~~G-----~l~~~~~~G~g~---~~~~~~s~~~vnDg~WH~V~v~ 95 (410) T 3asi_A 27 SMHLFFQFKTTSL-DGLILYNSG--DGNDFIVVELVKG-----YLHYVFDLGNGA---NLIKGSSNKPLNDNQWHNVMIS 95 (410) T ss_dssp CEEEEEEEECSCS-CEEEEEEEB--STTCEEEEEEETT-----EEEEEEESSSCE---EEEECCCSSCSCSSSCEEEEEE T ss_pred eEEEEEEEEECCC-CEEEEEeCC--CCCCeEEEEEECC-----EEEEEEECCCCc---EEEEecCCCccCCCCCEEEEEE Confidence 7888888987664 466664433 3456777777643 277777543221 2222 2467889999999999 Q ss_pred EecCe-EEEEEccccceeeeeecCCcccccCCCceEEEeecccc----------cCCccccceEeEEEec Q FBpp0308937 165 VLSDK-VSFYYDCELRNTTLVTREPIELVFDSASTLYIGQAGSI----------IGGKFEGYLEKINVYG 223 (973) Q Consensus 165 V~g~~-VtLyVDC~~~~t~~l~r~~~~l~~~~~~~l~IGq~g~~----------~~~~F~G~LQ~Lri~~ 223 (973) ..... ++|+||........ .....| +....||||-.... ....|.|=|++|+|-. T Consensus 96 ~~~~~~~~L~vD~~~~~~~~--~~~~~l--~~~~~lyvGG~p~~~~~~~~~~~~~~~~F~GCi~~v~in~ 161 (410) T 3asi_A 96 RDTSNLHTVKIDTKITTQIT--AGARNL--DLKSDLYIGGVAKETYKSLPKLVHAKEGFQGCLASVDLNG 161 (410) T ss_dssp ECTTCEEEEEETTEEEEEEC--TTCCCC--CBCSCEEESCCCGGGGGGSCTTCCCSSBCCEEEEEEESSS T ss_pred EcCCccEEEEECCccceecC--CCceee--ccCCCeEEcccccchhcccccccccccCcceEeeeeEECC Confidence 99876 69999986543221 111222 33467999875221 1246999999998743No 47>3n7l_A Neurotoxin; HCR/D-SA, ganglioside binding loop; 2.00A {Clostridium botulinum} SCOP: b.29.1.0 b.42.4.0 PDB: 3azw_A 3azv_A 4isr_A 4isq_A 3n7m_A 4fvv_A* 3n7k_A 3r4s_A* 3r4u_A Probab=96.57 E-value=0.017 Score=66.70 Aligned_cols=165 Identities=13% Similarity=0.186 Sum_probs=90.0 Q ss_pred CceEEeccCCCCcceEecCCcc------cCCcchhccccccc-ceEEEEEeeccC---C-CCceEEEEEcCCCCeEEEEE Q FBpp0308937 51 AGIEFGEAEDGFPAFRFLQTAD------VKSPYRMLLPEKLY-EFAILITFRQSS---L-KGGYLFSVVNPLDTVVQLGV 119 (973) Q Consensus 51 ~GV~~v~G~d~~pAy~f~~~a~------l~~pt~~lfp~~~~-eFSllaT~R~~~---~-~~g~LfsI~~~~~~~~qlgl 119 (973) ..|+++.| ...|+.|..... |.+|... +-..+. +|||.+++|+.. . ....||+..+. . .-+.+ T Consensus 32 g~v~~~~G--~g~Al~l~g~~~~~s~v~V~lPn~l-i~n~~~~~FTVSfWVK~~~~~t~~~~~~If~~~~~--~-sGW~I 105 (424) T 3n7l_A 32 GNVQLNPI--FPFDFKLGSSGDDRGKVIVTQNENI-VYNAMYESFSISFWIRINKWVSNLPGYTIIDSVKN--N-SGWSI 105 (424) T ss_dssp SBCEECSS--TTCCEEEESCSTTBCEEEEECCHHH-HHTTTTTEEEEEEEEEEETCCTTCCCEEEEEEESS--S-CEEEE T ss_pred CceEEecC--CCcEEEEccCCCccceEEEECChHH-hcccCCCcEEEEEEeccccccCCCCccEEEeccCC--C-CCeEE Confidence 45788887 456888875432 3333332 223334 899999999876 2 23567776642 2 22333 Q ss_pred EEcccccCceeEEEEEEecccccceeeeee------ecccCCCceEEEEEEEe-cCeEEEEEccccceeeeeecC----- Q FBpp0308937 120 HLSPVVKNSYNVSLVYTQADQNIGRKLASF------GVAHVPDKWNSIALQVL-SDKVSFYYDCELRNTTLVTRE----- 187 (973) Q Consensus 120 ~lsg~~~~~~~i~L~Y~~~~~~~~q~~~sF------~v~l~dg~WHrlaLsV~-g~~VtLyVDC~~~~t~~l~r~----- 187 (973) .+.. ++ +.+...+..+. .+.+.| .+++. ++||+|++.+. ...+.+|||-+++.+..+... T Consensus 106 ~l~~---n~--l~ws~~d~~G~--~~~iwfdy~~~~~~~l~-n~W~HVAvTyD~~g~~kiYINGelv~s~~i~~~~~i~~ 177 (424) T 3n7l_A 106 GIIS---NF--LVFTLKQNENS--EQDINFSYDISKNAAGY-NKWFFVTITTNMMGNMMIYINGKLIDTIKVKELTGINF 177 (424) T ss_dssp EEET---TE--EEEEEEEETTE--EEEEEEECCGGGCTTCC-CSCEEEEEEEETTSEEEEEETTEEEEEEECCCCTTCCC T ss_pred EeCC---Cc--eEEEEecCCCc--cceeeecccccccCCCC-CceEEEEEEECCCCCEEEEECCEEeeeeeecccccccc Confidence 3322 22 33333322211 122222 24455 99999999999 678899999998876543211 Q ss_pred CcccccCCCceEEEeecccccCCccccceEeEEEecCCccccc Q FBpp0308937 188 PIELVFDSASTLYIGQAGSIIGGKFEGYLEKINVYGNPDAINV 230 (973) Q Consensus 188 ~~~l~~~~~~~l~IGq~g~~~~~~F~G~LQ~Lri~~dP~~~~~ 230 (973) ...+.+.....+.||+.. .....|.|.|.+|||+..+..+.+ T Consensus 178 ~~~i~~~~g~~~~iG~~~-~~d~~f~G~IDE~RIynrALTaeE 219 (424) T 3n7l_A 178 SKTITFQMNKIPNTGLIT-SDSDNINMWIRDFYIFAKELDDKD 219 (424) T ss_dssp CSEEEEEEEECTTSCCCC-----CCEEEEEEEEEESSCCCHHH T ss_pred CceeeeccCcceeecccc-cCCCCCcEEEeEEEEECCcCCHHH Confidence 001111111111223321 113468899999999988765554No 48>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A* Probab=96.56 E-value=0.023 Score=74.63 Aligned_cols=122 Identities=15% Similarity=0.139 Sum_probs=79.9 Q ss_pred EEEEEeeccCCCCceEEEEEcCCCCeEEEEEEEcccccCceeEEEEEEecccccceeeeee-ecccCCCceEEEEEEEec Q FBpp0308937 89 AILITFRQSSLKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLASF-GVAHVPDKWNSIALQVLS 167 (973) Q Consensus 89 SllaT~R~~~~~~g~LfsI~~~~~~~~qlgl~lsg~~~~~~~i~L~Y~~~~~~~~q~~~sF-~v~l~dg~WHrlaLsV~g 167 (973) .|.+.||. +...+.||.+.+......++.|.|... .|.|.|..... ...+.+ ...+.||+||+|.|.-.+ T Consensus 1084 ~i~l~frT-~~~~g~Ll~~~s~~~~~~~l~l~l~~G-----~l~~~~~~g~~---~~~~~~~~~~v~DG~wH~v~~~r~~ 1154 (1245) T 3qcw_A 1084 RLAIGFST-VQKEAVLVRVDSSSGLGDYLELHIHQG-----KIGVKFNVGTD---DIAIEESNAIINDGKYHVVRFTRSG 1154 (1245) T ss_dssp EEEEEEEB-CCSSEEEEEEEECTTCCCEEEEEEETT-----EEEEEEESSSC---CEEEECCSCCCBSSSCEEEEEEEET T ss_pred eEEEEEEE-ecCCeEEEEEeccCCCCceEEEEEECC-----EEEEEEECCCC---ceEeecCceEcCCCcEEEEEEEEcC Confidence 34555553 456789998876532346777777532 27777764322 123333 467889999999999999 Q ss_pred CeEEEEEccccceeeeeecCCcccccCCCceEEEeecccccCCccccceEeEEEe Q FBpp0308937 168 DKVSFYYDCELRNTTLVTREPIELVFDSASTLYIGQAGSIIGGKFEGYLEKINVY 222 (973) Q Consensus 168 ~~VtLyVDC~~~~t~~l~r~~~~l~~~~~~~l~IGq~g~~~~~~F~G~LQ~Lri~ 222 (973) ..++|+||-..+... ++.......+.....||||.. .....|+|-|+.+++- T Consensus 1155 ~~~~l~VD~~~~~~~-~~~g~~~~~~~~~~~l~lGg~--~~~~~F~Gcl~~v~~n 1206 (1245) T 3qcw_A 1155 GNATLQVDSWPVIER-YPAGRQLTIFNSQATIIIGGK--EQGQPFQGQLSGLYYN 1206 (1245) T ss_dssp TEEEEEETTSCCEEE-CCCSCCCCCBCSEEEEEESST--TTTCCCCEEEEEEEET T ss_pred CEEEEEECCccceee-cCCCcceEEeecCCeEEECCc--cCCCCceEEEeEEEEC Confidence 999999999765442 221111111344578999965 2346799999999974No 49>3rsj_A BONT/F; clostridium botulinum type F, ganglioside binding site, GD1A; HET: NGA GAL SIA; 2.00A {Clostridium botulinum} SCOP: b.29.1.0 b.42.4.0 PDB: 3fuq_A Probab=96.39 E-value=0.15 Score=57.59 Aligned_cols=163 Identities=8% Similarity=0.117 Sum_probs=99.5 Q ss_pred CceEEeccCCCCcceEecCCcc----cCCcchhccccccc-ceEEEEEeeccCCC-------CceEEEEEcCCCCeEEEE Q FBpp0308937 51 AGIEFGEAEDGFPAFRFLQTAD----VKSPYRMLLPEKLY-EFAILITFRQSSLK-------GGYLFSVVNPLDTVVQLG 118 (973) Q Consensus 51 ~GV~~v~G~d~~pAy~f~~~a~----l~~pt~~lfp~~~~-eFSllaT~R~~~~~-------~g~LfsI~~~~~~~~qlg 118 (973) ..|.+|.| -.-|+.|..... +.+ ...++-..+. +|||.+++|..... .-+||.-.+. ++.-+ . T Consensus 30 g~v~lv~g--~~~a~~L~~s~~s~i~I~~-~ndii~n~~~~nFSIsFWvri~k~~t~~n~~~e~tII~~~~~-nNsGW-~ 104 (413) T 3rsj_A 30 GDVYIYST--NRNQFGIYSSKPSEVNIAQ-NNDIIYNGRYQNFSISFWVRIPKYFNKVNLNNEYTIIDCIRN-NNSGW-K 104 (413) T ss_dssp ECCEECSS--CTTEEEEESSSSEEEEEEC-CTTTCCCCSSCCEEEEEEEECCCCCSGGGTTCCEEEEEEEET-TTEEE-E T ss_pred CceEEEec--CCcEEEEccCCCcceEEec-CcceeeccccCcEEEEEEEEcCCcccccccCCcceEEEeeec-CCCCc-E Confidence 45777777 345666665443 333 3444445565 99999999986552 3568877743 23322 2 Q ss_pred EEEcccccCceeEEEEEEecccccceeeeeeec----ccC--CCceEEEEEEEe-cCeEEEEEccccceeeeeecCCccc Q FBpp0308937 119 VHLSPVVKNSYNVSLVYTQADQNIGRKLASFGV----AHV--PDKWNSIALQVL-SDKVSFYYDCELRNTTLVTREPIEL 191 (973) Q Consensus 119 l~lsg~~~~~~~i~L~Y~~~~~~~~q~~~sF~v----~l~--dg~WHrlaLsV~-g~~VtLyVDC~~~~t~~l~r~~~~l 191 (973) |.+... .+.+-..+..+ ..+.+.|.. .+. -++||.|+++|. -....+|||-+++....+.... ++ T Consensus 105 Isl~~n-----~liWtl~Ds~g--~~k~i~f~y~~~~~i~dyiNkW~~VtIt~dRlg~a~IYINGkLi~~~~I~~l~-~I 176 (413) T 3rsj_A 105 ISLNYN-----KIIWTLQDTAG--NNQKLVFNYTQMISISDYINKWIFVTITNNRLGNSRIYINGNLIDEKSISNLG-DI 176 (413) T ss_dssp EEEETT-----EEEEEEECTTS--CEEEEEEECCSBSSSCSSTTSEEEEEEEECTTSEEEEEETTEEEEEEECTTCC-CC T ss_pred EEECCC-----eEEEEEEcCCC--cceeEEEecccccchhhccCceEEEEEEEcCCCceEEEECCEEeeccChhhhc-ce Confidence 223322 14444443333 235555642 222 389999999999 5788999999999887555432 22 Q ss_pred ccCCCceEEEeecccccCCccccceEeEEEecCCccccc Q FBpp0308937 192 VFDSASTLYIGQAGSIIGGKFEGYLEKINVYGNPDAINV 230 (973) Q Consensus 192 ~~~~~~~l~IGq~g~~~~~~F~G~LQ~Lri~~dP~~~~~ 230 (973) ..+..+.++--+. ...+| +.|.+|+|+..+....+ T Consensus 177 --~ss~~I~~~vd~~-~d~~~-~~Id~l~If~k~Lt~~E 211 (413) T 3rsj_A 177 --HVSDNILFKIVGC-NDTRY-VGIRYFKVFDTELGKTE 211 (413) T ss_dssp --CCCSEEEEEEESC-CSSCE-EEEEEEEEESSCCCHHH T ss_pred --eecCeEEEEeccc-CCCce-EEEeeEEEecccCCHHH Confidence 2345566663222 22367 99999999988865544No 50>1epw_A Bontoxilysin B, botulinum neurotoxin type B; zinc, metalloprotease, transmembrane, hydrolase; 1.90A {Clostridium botulinum} SCOP: b.29.1.6 b.42.4.2 d.92.1.7 h.4.2.1 PDB: 1f31_A* 1g9a_A* 1g9b_A* 1g9c_A* 1g9d_A* 1i1e_A* 1s0b_A 1s0c_A 1s0d_A 1s0e_A 1s0f_A 1s0g_A 2np0_A 3zuq_A 2etf_A 2xhl_A 1z0h_A 4kbb_A* 2nm1_A 1f82_A ... Probab=96.20 E-value=0.13 Score=65.51 Aligned_cols=155 Identities=10% Similarity=0.198 Sum_probs=90.3 Q ss_pred CCcceEecCCcc----cCCcchhccccccc-ceEEEEEeeccCC-CC---------ceEEEEEcCCCCeEEEEEEEcccc Q FBpp0308937 61 GFPAFRFLQTAD----VKSPYRMLLPEKLY-EFAILITFRQSSL-KG---------GYLFSVVNPLDTVVQLGVHLSPVV 125 (973) Q Consensus 61 ~~pAy~f~~~a~----l~~pt~~lfp~~~~-eFSllaT~R~~~~-~~---------g~LfsI~~~~~~~~qlgl~lsg~~ 125 (973) ...|+.|..... +.++...++ .... +|||.+++|+... .. ..+|+-.+. ...-++.+ . T Consensus 894 ~GkAl~FdGssgS~I~V~LPnnli~-ns~~d~FTISFWVK~~s~~t~~i~~f~~ne~tfIs~~~n-nsGW~ISL--e--- 966 (1290) T 1epw_A 894 DKNQFKLTSSANSKIRVTQNQNIIF-NSVFLDFSVSFWIRIPKYKNDGIQNYIHNEYTIINCMKN-NSGWKISI--R--- 966 (1290) T ss_dssp TTSEEEECSSTTCCEEEECCTTSSC-CCSSCCEEEEEEEECCCCCGGGHHHHHHCEEEEEEEEET-TEEEEEEE--E--- T ss_pred cCceEEecCCCCcceEEEcCccccc-CCCCCCEEEEEEeccccccCccccccccccceEEecccC-CCCceEEe--c--- Confidence 346788875443 333332222 1223 8999999999775 22 345644432 12223332 2 Q ss_pred cCceeEEEEEEecccccceeeeeee----cccC--CCceEEEEEEEecCeEEEEEccccceeeeeecCCcccccCCCceE Q FBpp0308937 126 KNSYNVSLVYTQADQNIGRKLASFG----VAHV--PDKWNSIALQVLSDKVSFYYDCELRNTTLVTREPIELVFDSASTL 199 (973) Q Consensus 126 ~~~~~i~L~Y~~~~~~~~q~~~sF~----v~l~--dg~WHrlaLsV~g~~VtLyVDC~~~~t~~l~r~~~~l~~~~~~~l 199 (973) .++ +.+...+..+. ...+.|. ..+. .++||+|++.+....+++|||-+++.+..+.... .+ .....+ T Consensus 967 dnt--L~wsl~DsnGn--~~~Iwfd~~t~~~Ipdy~NkW~HVAITyD~g~vKIYINGeLVas~sitgL~-dI--~ss~~I 1039 (1290) T 1epw_A 967 GNR--IIWTLIDINGK--TKSVFFEYNIREDISEYINRWFFVTITNNLNNAKIYINGKLESNTDIKDIR-EV--IANGEI 1039 (1290) T ss_dssp TTE--EEEEEECTTCC--EEEEEEECCSSCSSCSSTTSCEEEEEEECSSEEEEEETTEEEEEEECSSCC-CC--CCCSEE T ss_pred CCe--EEEEEecCCCC--cceeEEecccccCCCCCCCceEEEEEEEcCCeEEEEECCEEeeccccccCc-cc--cccCee Confidence 222 44444332211 1122232 1222 5999999999999999999999998876544322 22 224568 Q ss_pred EEeecccccCCccccceEeEEEecCCccccc Q FBpp0308937 200 YIGQAGSIIGGKFEGYLEKINVYGNPDAINV 230 (973) Q Consensus 200 ~IGq~g~~~~~~F~G~LQ~Lri~~dP~~~~~ 230 (973) .+|.... ....|.|.|.+|||+..+..+.+ T Consensus 1040 ~LGv~n~-~D~~F~G~IDEfRIYNRALSaeE 1069 (1290) T 1epw_A 1040 IFKLDGD-IDRTQFIWMKYFSIFNTELSQSN 1069 (1290) T ss_dssp EEEEEES-CCTTCCEEEEEEEEESSCCCHHH T ss_pred EEEecCC-CCcCcceEeeeEEEECCcCCHHH Confidence 8887532 33569999999999987765443No 51>2nyy_A Botulinum neurotoxin type A; botulinum, neurotoxin, FAB, protein antibody complex, toxin- system complex; 2.61A {Clostridium botulinum} SCOP: b.29.1.6 b.42.4.2 d.92.1.7 h.4.2.1 PDB: 2nz9_A 3bta_A 3v0a_A* 3v0b_A 3v0c_A 3zus_A 3zur_A Probab=96.13 E-value=0.12 Score=64.76 Aligned_cols=166 Identities=8% Similarity=0.159 Sum_probs=96.8 Q ss_pred CceEEeccCCCCcceEecCCcc----cCCcchhccccccc-ceEEEEEeeccCCCC----ceEEEEEcCCCCeEEEEEEE Q FBpp0308937 51 AGIEFGEAEDGFPAFRFLQTAD----VKSPYRMLLPEKLY-EFAILITFRQSSLKG----GYLFSVVNPLDTVVQLGVHL 121 (973) Q Consensus 51 ~GV~~v~G~d~~pAy~f~~~a~----l~~pt~~lfp~~~~-eFSllaT~R~~~~~~----g~LfsI~~~~~~~~qlgl~l 121 (973) ..|+++.| -.-||.|..... +. -...++-+.++ +|||.+++|..+... --.++|.+......-+.+-+ T Consensus 901 G~V~~v~G--ngnA~~L~gs~~S~~~I~-~~ndii~n~~~~nFSISFWvRipk~~~~~n~~~eyTIIn~k~nNsGW~I~L 977 (1295) T 2nyy_A 901 SKVNFDPI--DKNQIQLFNLESSKIEVI-LKNAIVYNSMYENFSTSFWIRIPKYFNSISLNNEYTIINCMENNSGWKVSL 977 (1295) T ss_dssp TTEEECTT--CTTCEEEESSTTSCEEEE-ECGGGCCTTTTSEEEEEEEEECCCCCSGGGGGCCEEEEEEEETTEEEEEEE T ss_pred CceEEEec--CCcEEEecCCCCcceEEe-cCcchhcccccCceEEEEEEEcCCCCcccccCCceeeEeeccCCCCeEEEe Confidence 45667766 456788775333 33 34444556666 999999999876653 22344443221222233333 Q ss_pred cccccCceeEEEEEEecccccceeeeeee------cccCCCceEEEEEEEe-cCeEEEEEccccceeeeeecCCcccccC Q FBpp0308937 122 SPVVKNSYNVSLVYTQADQNIGRKLASFG------VAHVPDKWNSIALQVL-SDKVSFYYDCELRNTTLVTREPIELVFD 194 (973) Q Consensus 122 sg~~~~~~~i~L~Y~~~~~~~~q~~~sF~------v~l~dg~WHrlaLsV~-g~~VtLyVDC~~~~t~~l~r~~~~l~~~ 194 (973) ... .+.+...+..+ ..+...|. ++...++||+|+++|. -...++|+|-+++.+..+... -.+. T Consensus 978 ~~n-----~liWtl~DsNg--n~k~i~f~y~~~~~I~dyiNkW~hVTIt~DRlg~a~IYINGkLv~sk~I~~L-g~I~-- 1047 (1295) T 2nyy_A 978 NYG-----EIIWTLQDTQE--IKQRVVFKYSQMINISDYINRWIFVTITNNRLNNSKIYINGRLIDQKPISNL-GNIH-- 1047 (1295) T ss_dssp ETT-----EEEEEEECSSS--CEEEEEEECCSBSSSCSSTTSCEEEEEEEETTSEEEEEETTEEEEEEECTTC-CCCC-- T ss_pred CCC-----cEEEEEEecCC--cceeeEEecccccCcccccCceEEEEEEECCCCCeEEEECCEEeeccccccC-Ccee-- Confidence 322 12222222222 22444443 2222389999999999 467799999999998866554 2221 Q ss_pred CCceEEEeecccccCCccccceEeEEEecCCccccc Q FBpp0308937 195 SASTLYIGQAGSIIGGKFEGYLEKINVYGNPDAINV 230 (973) Q Consensus 195 ~~~~l~IGq~g~~~~~~F~G~LQ~Lri~~dP~~~~~ 230 (973) .+..+.++=-+ .....|.+.|.+|+|+.-+-...+ T Consensus 1048 ssn~Is~gv~g-~~d~n~~g~ID~F~IfnK~Lt~~E 1082 (1295) T 2nyy_A 1048 ASNNIMFKLDG-CRDTHRYIWIKYFNLFDKELNEKE 1082 (1295) T ss_dssp CCSEEEEEEES-CCCTTCEEEEEEEEEESSCCCHHH T ss_pred ecCeEEEEEec-cCCCCceeeEeeEEEecCcCCHHH Confidence 23333443221 234679999999999988865444No 52>2sli_A Intramolecular trans-sialidase; hydrolase, neuraminidase; HET: SKD; 1.80A {Macrobdella decora} SCOP: b.29.1.9 b.68.1.1 PDB: 1sll_A 1sli_A* 3sli_A* 4sli_A* Probab=95.82 E-value=0.12 Score=63.50 Aligned_cols=136 Identities=16% Similarity=0.185 Sum_probs=86.6 Q ss_pred ccceEEEEEeeccC-CCCceEEEEEcCCC--CeEEEEEEEcccccCceeEEEEEEecccccceeeeeeecc------cCC Q FBpp0308937 85 LYEFAILITFRQSS-LKGGYLFSVVNPLD--TVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLASFGVA------HVP 155 (973) Q Consensus 85 ~~eFSllaT~R~~~-~~~g~LfsI~~~~~--~~~qlgl~lsg~~~~~~~i~L~Y~~~~~~~~q~~~sF~v~------l~d 155 (973) |.+|+|.+.||... ++...||++.+... ...+|-|.+... + .+.|.....+... ...+..+ ..+ T Consensus 34 l~~~Tv~~~~~~~~~~~~~~Lfs~~~~t~~~~n~~~~l~~~~~--g--~~~~~v~~~~~~~---~~~~~~~~~~~~~~~~ 106 (679) T 2sli_A 34 MTQGTIILSYKSTSENGIQSLFSVGNSTAGNQDRHFHIYITNS--G--GIGIELRNTDGVF---NYTLDRPASVRALYKG 106 (679) T ss_dssp CSSEEEEEEEEECCCCSEEEEEEEECCSTTCTTEEEEEEEETT--S--CEEEEEEECTTTC---EEEEEESSCCCSEETT T ss_pred ccccEEEEEEEECCCCCceEEEEecCCCCCCccccEEEEEeCC--C--EEEEEEecCCCce---eEEEecCcccceeccC Confidence 45999999999976 66667999996422 246777777642 2 2555555443211 1222222 124 Q ss_pred -CceEEEEEEEec--CeEEEEEccccceeeeeecCCcccc-cCCCceEEEeecc-c-ccCCccccceEeEEEecCCccc Q FBpp0308937 156 -DKWNSIALQVLS--DKVSFYYDCELRNTTLVTREPIELV-FDSASTLYIGQAG-S-IIGGKFEGYLEKINVYGNPDAI 228 (973) Q Consensus 156 -g~WHrlaLsV~g--~~VtLyVDC~~~~t~~l~r~~~~l~-~~~~~~l~IGq~g-~-~~~~~F~G~LQ~Lri~~dP~~~ 228 (973) ..||+|++.... ..++||||-..+.+..+... ..+. +..-..++||+.- . .....|.|.|.++.|+...... T Consensus 107 ~~~w~hv~~t~ds~~g~~~lyvnG~~~~~~~~~~~-~~~~~~~g~~~~~iG~~~~~g~~~~~f~G~I~dv~v~~~~ls~ 184 (679) T 2sli_A 107 ERVFNTVALKADAANKQCRLFANGELLATLDKDAF-KFISDITGVDNVTLGGTKRQGKIAYPFGGTIGDIKVYSNALSD 184 (679) T ss_dssp EECCEEEEEEEETTTTEEEEEETTEEEEEEECSSC-CCGGGSTTCCEEEESSEEETTEEESCCCEEEEEEEEESSCCCH T ss_pred CCceEEEEEEEecCCCeEEEEECCEEEEeccCCcc-eeeccCCCcceEEECCeeCCCcccceEeeEEEEEEEcCCCCCH Confidence 369999999865 58999999999876655432 1111 2233579999842 1 1123599999999999866543No 53>2vxr_A Botulinum neurotoxin type G; hydrolase, ganglioside, protease, recepto secreted, binding domain, metalloprotease; 1.90A {Clostridium botulinum} SCOP: b.29.1.0 b.42.4.0 PDB: 3mpp_G Probab=95.54 E-value=0.25 Score=56.33 Aligned_cols=163 Identities=12% Similarity=0.209 Sum_probs=96.3 Q ss_pred CceEEeccCCCCcceEecCCcc----cCCcchhccccccc-ceEEEEEeeccCC-CC---------ceEEEEEcCCCCeE Q FBpp0308937 51 AGIEFGEAEDGFPAFRFLQTAD----VKSPYRMLLPEKLY-EFAILITFRQSSL-KG---------GYLFSVVNPLDTVV 115 (973) Q Consensus 51 ~GV~~v~G~d~~pAy~f~~~a~----l~~pt~~lfp~~~~-eFSllaT~R~~~~-~~---------g~LfsI~~~~~~~~ 115 (973) ..|.+|. -..-||.|..... +.+ ...++-+.+. +|||.+++|.... .. -+||.-.+. ..-- T Consensus 77 g~V~lv~--in~na~~L~~s~~s~i~I~~-~ndiiyN~~~~nFSIsFWvRipk~~t~~tn~y~~nEyTII~~~~n-NsGW 152 (482) T 2vxr_A 77 SDVIFND--IGNGQFKLNNSENSNITAHQ-SKFVVYDSMFDNFSINFWVRTPKYNNNDIQTYLQNEYTIISCIKN-DSGW 152 (482) T ss_dssp TTCEEEC--STTCEEEEESSTTCCEEEEC-CTTTSCEESSCCEEEEEEEECCCCCGGGHHHHHHCEEEEEEEEET-TEEE T ss_pred CceEEEE--ccCcEEEecCCCCcceEEEc-ccceeeccccCceEEEEEEEcCCcccccccccccCCceEEEeecC-CCCc Confidence 4455555 1234666664433 333 4444555565 9999999998654 21 367765543 2223 Q ss_pred EEEEEEcccccCceeEEEEEEecccccceeeeeeec----ccC--CCceEEEEEEEe-cCeEEEEEccccceeeeeecCC Q FBpp0308937 116 QLGVHLSPVVKNSYNVSLVYTQADQNIGRKLASFGV----AHV--PDKWNSIALQVL-SDKVSFYYDCELRNTTLVTREP 188 (973) Q Consensus 116 qlgl~lsg~~~~~~~i~L~Y~~~~~~~~q~~~sF~v----~l~--dg~WHrlaLsV~-g~~VtLyVDC~~~~t~~l~r~~ 188 (973) .+. +... .+.+-..+..+ ..+.+.|.. .+. -++||.|+++|. -..+.+|||-+++....+.... T Consensus 153 ~Is--l~~n-----~LIWtl~Ds~g--~~k~I~f~y~~~~nisdyiNkW~fITITndRlGna~IYINGkLi~~~~I~~L~ 223 (482) T 2vxr_A 153 KVS--IKGN-----RIIWTLIDVNA--KSKSIFFEYSIKDNISDYINKWFSITITNDRLGNANIYINGSLKKSEKILNLD 223 (482) T ss_dssp EEE--EETT-----EEEEEEECTTS--CEEEEEEECCSCCSSCSSTTSCEEEEEEECTTSEEEEEETTEEEEEEECTTCC T ss_pred EEE--ECCC-----eEEEEEEcCCC--cceeEEEecccccchhhccCceEEEEEEEcCCCceEEEECCEEeeccChhhhc Confidence 333 3322 13344443333 235555642 222 389999999999 5788999999999887554321 Q ss_pred cccccCCCceEEEeecccccCCccccceEeEEEecCCccccc Q FBpp0308937 189 IELVFDSASTLYIGQAGSIIGGKFEGYLEKINVYGNPDAINV 230 (973) Q Consensus 189 ~~l~~~~~~~l~IGq~g~~~~~~F~G~LQ~Lri~~dP~~~~~ 230 (973) .+..+..|.++--+ .....|.+.|.+|+|+..+....+ T Consensus 224 ---~I~~s~~I~fgvdn-~~D~n~~i~Id~l~If~keLt~~E 261 (482) T 2vxr_A 224 ---RINSSNDIDFKLIN-CTDTTKFVWIKDFNIFGRELNATE 261 (482) T ss_dssp ---CEECCSEEEEEEES-CCCTTCEEEEEEEEEESSCCCHHH T ss_pred ---ccccCCeEEEEecc-CCCCCceeEEeeEEEecccCCHHH Confidence 12234555665322 233569999999999998865554No 54>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A* Probab=95.43 E-value=0.11 Score=68.26 Aligned_cols=121 Identities=16% Similarity=0.269 Sum_probs=77.2 Q ss_pred ceEEEEEeeccCCCCceEEEEEcCCCCeEEEEEEEcccccCceeEEEEEEecccccceeeee--eecccCCCceEEEEEE Q FBpp0308937 87 EFAILITFRQSSLKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLAS--FGVAHVPDKWNSIALQ 164 (973) Q Consensus 87 eFSllaT~R~~~~~~g~LfsI~~~~~~~~qlgl~lsg~~~~~~~i~L~Y~~~~~~~~q~~~s--F~v~l~dg~WHrlaLs 164 (973) ++.|.+.||... ..+.||.... +...++.|.|..- .|.|.|....+. ..++ ....+.||+||+|.|. T Consensus 859 ~~~is~~frT~~-~~GlLl~~~~--~~~dfl~l~L~~G-----~l~~~~~~g~g~---~~~~~~s~~~vnDG~WH~V~~~ 927 (1245) T 3qcw_A 859 SMHLFFQFKTTS-LDGLILYNSG--DGNDFIVVELVKG-----YLHYVFDLGNGA---NLIKGSSNKPLNDNQWHNVMIS 927 (1245) T ss_dssp CEEEEEEEECSC-SCEEEEEEEE--STTCEEEEEEETT-----EEEEEEESSSCC---EEEECCCSSCSCSSSCEEEEEE T ss_pred eEEEEEEEEECC-CCEEEEEeCC--CCCceEEEEEECC-----EEEEEEECCCCc---EEEEecCccccCCCCeEEEEEE Confidence 677778888765 4467665443 2356777877643 277777643322 2222 2567889999999999 Q ss_pred EecCe-EEEEEccccceeeeeecCCcccccCCCceEEEeecccc----------cCCccccceEeEEEe Q FBpp0308937 165 VLSDK-VSFYYDCELRNTTLVTREPIELVFDSASTLYIGQAGSI----------IGGKFEGYLEKINVY 222 (973) Q Consensus 165 V~g~~-VtLyVDC~~~~t~~l~r~~~~l~~~~~~~l~IGq~g~~----------~~~~F~G~LQ~Lri~ 222 (973) ....+ .+|.||.......... ... ++....||||-.... ....|+|=|++|+|- T Consensus 928 ~~~~~~~~L~VD~~~~~~~~~~--~~~--l~~~~~lyvGG~~~~~~~~~~~~~~~~~~F~GCi~~l~in 992 (1245) T 3qcw_A 928 RDTSNLHTVKIDTKITTQITAG--ARN--LDLKSDLYIGGVAKETYKSLPKLVHAKEGFQGCLASVDLN 992 (1245) T ss_dssp ECTTCEEEEEETTEEEEEECCC--CCC--CCEEEEEEESCCCGGGGGGCCTTCCCSSBCCEEEEEEEET T ss_pred EcCCceEEEEECCEeeeeecCC--cce--eccCCCeEEccccccccccchhhcccccCccceecceeEC Confidence 98866 5899998654322111 112 233467999864211 124699999999984No 55>3ffz_A Botulinum neurotoxin type E; botulinum neurotoxin serotype E, botulism, domain organization, endopeptidase, translocation, hydrolase; 2.65A {Clostridium botulinum} Probab=93.56 E-value=1.7 Score=54.93 Aligned_cols=162 Identities=8% Similarity=0.084 Sum_probs=92.1 Q ss_pred ceEEeccCCCCcceEecCCcc----cCCcchhccccccc-ceEEEEEeeccCCC--------CceEEEEEcCCCCeEEEE Q FBpp0308937 52 GIEFGEAEDGFPAFRFLQTAD----VKSPYRMLLPEKLY-EFAILITFRQSSLK--------GGYLFSVVNPLDTVVQLG 118 (973) Q Consensus 52 GV~~v~G~d~~pAy~f~~~a~----l~~pt~~lfp~~~~-eFSllaT~R~~~~~--------~g~LfsI~~~~~~~~qlg 118 (973) .|.+|.| -.-|+.|..... +. -...++-..+. +|||.+++|....+ .-+||.-.+. ++. -.. T Consensus 877 ~V~lv~G--n~na~~L~ss~~s~~~I~-~~ndii~n~~~~nFSIsFWvRipk~~~~~~n~~neyTII~~~~~-nNs-GW~ 951 (1252) T 3ffz_A 877 DVYKYPT--NKNQFGIYNDKLSEVNIS-QNDYIIYDNKYKNFSISFWVRIPNYDNKIVNVNNEYTIINCMRD-NNS-GWK 951 (1252) T ss_dssp CCEECTT--CTTCEEEESSSCEEEEEE-CCTTTSCCSSCCCCEEEEEEECCCCCSTTTCCCCCEEEEEEEET-TTE-EEE T ss_pred ceEEEec--CCceEEeccCCCCceEEe-cCcceeeccccCceEEEEEEEcCCcCCcccccCCcceEEEeecC-CCC-CcE Confidence 4555665 244666664322 33 33444445565 99999999985441 1357766633 222 122 Q ss_pred EEEcccccCceeEEEEEEecccccceeeeeeecccC------CCceEEEEEEEe-cCeEEEEEccccceeeeeecCCccc Q FBpp0308937 119 VHLSPVVKNSYNVSLVYTQADQNIGRKLASFGVAHV------PDKWNSIALQVL-SDKVSFYYDCELRNTTLVTREPIEL 191 (973) Q Consensus 119 l~lsg~~~~~~~i~L~Y~~~~~~~~q~~~sF~v~l~------dg~WHrlaLsV~-g~~VtLyVDC~~~~t~~l~r~~~~l 191 (973) +-+... . +.+-..+..+ ..+.+.|.+.++ -++||.|+++|. -....+|+|-+++....+.... ++ T Consensus 952 I~l~~n---~--LiWtl~Dsng--n~k~i~f~y~~~~~i~dyiNkW~fITIt~dRlg~a~IYINGkLi~~~~I~~l~-~I 1023 (1252) T 3ffz_A 952 VSLNHN---E--IIWTLQDNAG--INQKLAFNYGNANGISDYINKWIFVTITNDRLGDSKLYINGNLIDQKSILNLG-NI 1023 (1252) T ss_dssp EEEETT---E--EEEEEECSSS--CEEEEEEECCCCSBCCSSTTSCEEEEEEECTTSEEEEEETTEEEEEEECTTCC-CC T ss_pred EEeCCC---e--EEEEEEcCCC--cceeEEEecccccccccccCceEEEEEEEcCCCceeEEECCEEeeccchhhcc-cc Confidence 222221 1 3333333322 234555542222 389999999999 5778999999999887555432 22 Q ss_pred ccCCCceEEEeecccccCCccccceEeEEEecCCccccc Q FBpp0308937 192 VFDSASTLYIGQAGSIIGGKFEGYLEKINVYGNPDAINV 230 (973) Q Consensus 192 ~~~~~~~l~IGq~g~~~~~~F~G~LQ~Lri~~dP~~~~~ 230 (973) ..+..+.++=-+... ...+.|.+|+|+..+....+ T Consensus 1024 --~ss~~I~~kl~g~nd--~~~v~Id~l~If~k~Lt~~E 1058 (1252) T 3ffz_A 1024 --HVSDNILFKIVNCSY--TRYIGIRYFNIFDKELDETE 1058 (1252) T ss_dssp --CCCSEEEEEEESCSS--CCEEEEEEEEEESSCCCHHH T ss_pred --eecCeEEEEecCCCC--CcceeEeeeEeecCcCCHHH Confidence 234455452222112 24688999999988865554No 56>4b1m_A Levanase; hydrolase, CBM66; HET: FRU; 1.10A {Bacillus subtilis} PDB: 4b1l_A* 4azz_A Probab=91.57 E-value=0.93 Score=46.09 Aligned_cols=90 Identities=12% Similarity=0.130 Sum_probs=57.6 Q ss_pred cceEEEEEeeccC----CCCceEEEEEcCCCCeEEEEEEEcccccCceeEEEEEEecccccceeeeeeecccCCCceEEE Q FBpp0308937 86 YEFAILITFRQSS----LKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLASFGVAHVPDKWNSI 161 (973) Q Consensus 86 ~eFSllaT~R~~~----~~~g~LfsI~~~~~~~~qlgl~lsg~~~~~~~i~L~Y~~~~~~~~q~~~sF~v~l~dg~WHrl 161 (973) .+|.|-+.+|... .+.+.+|.+.. +......+.+... .+. +.|+ ...++. ...++.....+..++|+++ T Consensus 64 ~df~l~~e~k~~~~~~~~nsGi~~r~~~--d~~~~Y~~~i~~~-~~~--~~l~-~~~~g~-~~~l~~~~~~~~~g~W~~~ 136 (185) T 4b1m_A 64 SDFTYESDITIKDGNGRGAGALMFRSDK--DAKNGYLANVDAK-HDL--VKFF-KFENGA-ASVIAEYKTPIDVNKKYHL 136 (185) T ss_dssp SSEEEEEEEEEEEEEEEEEEEEEEEECT--TSSSEEEEEEETT-TTE--EEEE-EEETTE-EEEEEEEECCCCSSCCEEE T ss_pred CCEEEEEEEEEccCCCCccEEEEEEecC--CCCCeEEEEEECC-CCE--EEEE-EecCCc-eeEeeeccccCCCCCeEEE Confidence 4999999999865 46677776632 2344555666543 122 3333 222221 1123332344557999999 Q ss_pred EEEEecCeEEEEEccccceee Q FBpp0308937 162 ALQVLSDKVSFYYDCELRNTT 182 (973) Q Consensus 162 aLsV~g~~VtLyVDC~~~~t~ 182 (973) .|.|.+++|++|||-+++.+. T Consensus 137 ~I~~~G~~i~v~vNG~~v~~~ 157 (185) T 4b1m_A 137 KTEAEGDRFKIYLDDRLVIDA 157 (185) T ss_dssp EEEEETTEEEEEETTEEEEEE T ss_pred EEEEECCEEEEEECCEEEEEE Confidence 999999999999999887554No 57>1ei8_A Collagen-like peptide (Pro-HYP-Gly)4-PG-(Pro-HYP- Gly)5; triple helix, contractIle protein; 2.00A {Synthetic} SCOP: k.3.1.1 Probab=89.30 E-value=0.58 Score=33.55 Aligned_cols=8 Identities=100% Similarity=2.403 Sum_probs=2.9 Q ss_pred CCCCCCCC Q FBpp0308937 291 GPPGPPGP 298 (973) Q Consensus 291 GppGppGp 298 (973) |++|++|+ T Consensus 17 G~~G~pG~ 24 (29) T 1ei8_A 17 GPPGPPGP 24 (29) T ss_dssp CCCCCCCC T ss_pred CCCCCCCC Confidence 33333333No 58>1ms9_A Trans-sialidase; trans-glycosylation, protein-acrbohydrate interac beta-propeller, hydrolase; HET: LAT; 1.58A {Trypanosoma cruzi} SCOP: b.29.1.15 b.68.1.1 PDB: 1ms0_A* 1mr5_A* 1ms1_A 1ms4_A 1ms8_A* 1ms3_A* 2ah2_A* 3b69_A* 3opz_A 3pjq_A* 1s0i_A* 1s0j_A* 1ms5_A 1wcs_A 2ags_A* 2a75_A* 2fhr_A* 1n1t_A* 1n1s_A* 1n1v_A* ... Probab=88.29 E-value=6.1 Score=48.34 Aligned_cols=128 Identities=13% Similarity=0.107 Sum_probs=72.3 Q ss_pred ceEEEEEeecc--CCCCceEEEEE-cCCCCeEEEEEEEcccccCceeEEEEEEecccccceeeeeeecccCCCceEEEEE Q FBpp0308937 87 EFAILITFRQS--SLKGGYLFSVV-NPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLASFGVAHVPDKWNSIAL 163 (973) Q Consensus 87 eFSllaT~R~~--~~~~g~LfsI~-~~~~~~~qlgl~lsg~~~~~~~i~L~Y~~~~~~~~q~~~sF~v~l~dg~WHrlaL 163 (973) +|+|+||+-.. ++...-|+.+. +...+.+.|+|..+..+ + -.+.|... .. .+ ...-..++=|+++| T Consensus 495 ~ftlvatv~i~~~p~~~~pl~g~~~~~~~~~~~~glsy~~~~--~--w~~~~~~~--~~-~~----~~~w~~~~~~qv~l 563 (648) T 1ms9_A 495 AFTLVASVTIHEVPKGASPLLGASLDSSGGKKLLGLSYDKRH--Q--WQPIYGST--PV-TP----TGSWEMGKRYHVVL 563 (648) T ss_dssp EEEEEEEEEECSCCSSCEEEEEEESSSSSSSEEEEEEECTTS--C--EEEEETTS--CC-CC----BSCCCTTCEEEEEE T ss_pred cEEEEEEEEEecCCCCCCceeEEEeccCCCcEEEEEEEeCCC--c--EEEEeCCC--Cc-cc----cccccCCceEEEEE Confidence 99999999863 33333455443 22233455555555321 2 22333211 10 00 11123467799999 Q ss_pred EEecCeEEEEEccccce-ee--eeecCCcccccCCCceEEEeeccccc-CCccccceEeEEEecCCcccc Q FBpp0308937 164 QVLSDKVSFYYDCELRN-TT--LVTREPIELVFDSASTLYIGQAGSII-GGKFEGYLEKINVYGNPDAIN 229 (973) Q Consensus 164 sV~g~~VtLyVDC~~~~-t~--~l~r~~~~l~~~~~~~l~IGq~g~~~-~~~F~G~LQ~Lri~~dP~~~~ 229 (973) .+++.+.++|||-+.+. .. .+.. ... ..-+.+|||-.+... .......+.++.||-.|.... T Consensus 564 ~l~~~~~s~yvdg~~~~~~~~~~~~~-~~~---~~ishfy~gg~~~~~~~~~~~vtv~nv~lynr~l~~~ 629 (648) T 1ms9_A 564 TMANKIGSVYIDGEPLEGSGQTVVPD-ERT---PDISHFYVGGYKRSGMPTDSRVTVNNVLLYNRQLNAE 629 (648) T ss_dssp EEETTEEEEEETTEECTTCCEECSCS-SCC---CCCCEEEESSCSCTTSCCCCCEEEEEEEEESSCCCHH T ss_pred EEeCCEEEEEECCEeccccccccccC-Ccc---cccceEEEcCCCCccCCCCCCEEEEEeEEecCCCCHH Confidence 99999999999998873 22 2221 111 134789998764211 123456789999998775433No 59>1pwb_A SP-D, PSP-D, pulmonary surfactant-associated protein D; collectin, C-type lectin, alpha-helical coiled coil, carbohydrate recognition domain; HET: GLC; 1.40A {Homo sapiens} SCOP: d.169.1.1 h.1.1.1 PDB: 1pw9_A* 3ikn_A* 3ikp_A* 3ikq_A* 3ikr_A* 4e52_A* 2rie_A* 2ggx_A* 2ggu_A* 2ork_A* 2orj_A* 2ria_A* 2rib_A* 2ric_A* 2rid_A* 2os9_A* 3dbz_A 3g81_A* 3g83_A* 1b08_A ... Probab=86.35 E-value=0.17 Score=50.48 Aligned_cols=11 Identities=27% Similarity=1.047 Sum_probs=5.8 Q ss_pred cccCCCceEEE Q FBpp0308937 919 QSCDSKLIILC 929 (973) Q Consensus 919 ~~C~~~~~~lC 929 (973) .+|+..+..+| T Consensus 165 ~~C~~~~~~iC 175 (177) T 1pwb_A 165 RACGEKRLVVC 175 (177) T ss_dssp ECTTSEEEEEE T ss_pred ccCCCCeeEEE Confidence 34555555555No 60>4ccd_A Galactocerebrosidase; hydrolase, krabbe disease, glycosyl hydrolase, galactosidase D-galactal, lysosomal storage disease, enzyme-intermediate; HET: 2DG NAG; 1.97A {Mus musculus} PDB: 4ccc_A* 4cce_A* 4ufh_A* 4ufi_A* 4ufj_A* 4ufk_A* 4ufl_A* 4ufm_A* 3zr5_A* 3zr6_A* Probab=85.94 E-value=5.8 Score=48.61 Aligned_cols=89 Identities=7% Similarity=-0.069 Sum_probs=56.3 Q ss_pred ceEEEEEeeccCC-CC--ceEEEEEcCC---CCeEEEEEEEcccccCceeEEEEEEecccccceeeeeeecccCCCceEE Q FBpp0308937 87 EFAILITFRQSSL-KG--GYLFSVVNPL---DTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLASFGVAHVPDKWNS 160 (973) Q Consensus 87 eFSllaT~R~~~~-~~--g~LfsI~~~~---~~~~qlgl~lsg~~~~~~~i~L~Y~~~~~~~~q~~~sF~v~l~dg~WHr 160 (973) +|.|.+.+|.... .. +.+|.+.+.. +......+.|... + .+.|.. ..++ ...+++-.+.+..++||+ T Consensus 528 Dy~v~~dv~~~~~~~g~agl~fR~~~~G~~~~~~~gY~~~i~~~--G--~~~l~k-~~~g--~~~La~~~~~~~~~~w~~ 600 (654) T 4ccd_A 528 NMTVQCDVYIETPRSGGVFIAGRVNKGGILIRSATGVFFWIFAN--G--SYRVTA-DLGG--WITYASGHADVTAKRWYT 600 (654) T ss_dssp EEEEEEEEEECSTTTCEEEEEEEECCCGGGGGGCEEEEEEEETT--T--EEEEEE-ETTC--CSEEEEEECSCCTTCEEE T ss_pred cEEEEEEEEeccCCCCeEEEEEEEcCCCCCccccceEEEEEeCC--C--eEEEEE-ecCC--eEEEEeeeccCCCCceEE Confidence 9999999998763 22 2445544421 1234455555532 1 244443 3333 223444455777899999 Q ss_pred EEEEEecCeEEEEEccccceee Q FBpp0308937 161 IALQVLSDKVSFYYDCELRNTT 182 (973) Q Consensus 161 laLsV~g~~VtLyVDC~~~~t~ 182 (973) |.|.|++++|++|||-+++.+. T Consensus 601 l~v~v~G~~I~v~vdG~~v~~~ 622 (654) T 4ccd_A 601 LTLGIKGYFAFGMLNGTILWKN 622 (654) T ss_dssp EEEEEETTEEEEEETTEEEEEE T ss_pred EEEEEECCEEEEEECCEEEEEE Confidence 9999999999999998776554No 61>1pwb_A SP-D, PSP-D, pulmonary surfactant-associated protein D; collectin, C-type lectin, alpha-helical coiled coil, carbohydrate recognition domain; HET: GLC; 1.40A {Homo sapiens} SCOP: d.169.1.1 h.1.1.1 PDB: 1pw9_A* 3ikn_A* 3ikp_A* 3ikq_A* 3ikr_A* 4e52_A* 2rie_A* 2ggx_A* 2ggu_A* 2ork_A* 2orj_A* 2ria_A* 2rib_A* 2ric_A* 2rid_A* 2os9_A* 3dbz_A 3g81_A* 3g83_A* 1b08_A ... Probab=74.46 E-value=0.76 Score=45.61 Aligned_cols=7 Identities=0% Similarity=-0.054 Sum_probs=4.8 Q ss_pred eEEeeCC Q FBpp0308937 874 MVWHGSL 880 (973) Q Consensus 874 ~vw~Gs~ 880 (973) .+|.|++ T Consensus 112 ~~WiGl~ 118 (177) T 1pwb_A 112 AAFLSMT 118 (177) T ss_dssp CEECSCB T ss_pred eEEEeeE Confidence 5777765No 62>2zzj_A Glucuronan lyase A; beta-jelly roll; HET: CIT; 1.80A {Trichoderma reesei} Probab=71.35 E-value=74 Score=33.79 Aligned_cols=127 Identities=13% Similarity=0.100 Sum_probs=66.2 Q ss_pred CceEEecc--CCCCcceEecCCcccCC---c-chhccccccc---ceEEEEEeecc-----CCCCceEEEEEcCC-C--- Q FBpp0308937 51 AGIEFGEA--EDGFPAFRFLQTADVKS---P-YRMLLPEKLY---EFAILITFRQS-----SLKGGYLFSVVNPL-D--- 112 (973) Q Consensus 51 ~GV~~v~G--~d~~pAy~f~~~a~l~~---p-t~~lfp~~~~---eFSllaT~R~~-----~~~~g~LfsI~~~~-~--- 112 (973) ..|+.|.. .++..|++|.-..+... . +...+...+. ++.+-+.|+.. ......|+++.... + T Consensus 22 ~~i~~v~~~~~~G~~alr~~~~~d~~~~~~~RsE~~~~~~~~~g~~~wy~fs~~lp~d~~~~~~~~~iaQw~~~~~~~~~ 101 (238) T 2zzj_A 22 GTVSEVSNVVFKGTSALKMTQTYTPGYTGRYHSEVDHNRGYQRGEEQFYGFAFRLSEDWQFQPQSYNIAQFIANRPGAGC 101 (238) T ss_dssp CEEEEESSSCSSTTCEEEEEEECCTTCCSCCEEEEEEEEEEETTEEEEEEEEEEECTTCCCCSSEEEEEEEEEECTTCCC T ss_pred CceEEeCccccCCCCEEEEEEeCCCCCCCccceEEeecCCCCCCCcEEEEEEEECCCCCcCCCCceEEEEEEecCCCCCC Confidence 44666665 45577777763332111 1 1111111121 44444445542 22333466664321 1 Q ss_pred C----eEEEEEEEcccccCceeEEEEEEecc--cc-cceeeeee--ecccCCCceEEEEEEEe-----cCeEEEEEcccc Q FBpp0308937 113 T----VVQLGVHLSPVVKNSYNVSLVYTQAD--QN-IGRKLASF--GVAHVPDKWNSIALQVL-----SDKVSFYYDCEL 178 (973) Q Consensus 113 ~----~~qlgl~lsg~~~~~~~i~L~Y~~~~--~~-~~q~~~sF--~v~l~dg~WHrlaLsV~-----g~~VtLyVDC~~ 178 (973) + ..-+.|.+.+. + +.+++.... ++ -.+....+ ..++.-|+||+|.|.|. ...+.||+|-++ T Consensus 102 ~~~~~~P~~~l~v~g~---~--l~~r~~~g~~~~~~~~~~~~~~~~~~~~~~G~W~~~vi~v~ws~d~~G~~~vw~nG~~ 176 (238) T 2zzj_A 102 GGDDWMPSTMIWIQNN---Q--LYSRYVNGHYRQPNCGRNIVTRPNLATVSAGAWHRVVLQIKWASDNTGYFKIWFDGAK 176 (238) T ss_dssp SSSSEEEEEEEEEETT---E--EEEEEEEECCBTTBCCEEEEEEEEEEECCTTSCEEEEEEEEECSSTTEEEEEEETTEE T ss_pred CccCCCCceeEEEECC---E--EEEEEecCCccCccccCceeeecccCccCCCCeEEEEEEEEecCCCCEEEEEEECCEE Confidence 1 67788877654 2 334443211 11 11233333 23556899999999998 468999999988 Q ss_pred ceee Q FBpp0308937 179 RNTT 182 (973) Q Consensus 179 ~~t~ 182 (973) +... T Consensus 177 v~~~ 180 (238) T 2zzj_A 177 VHEE 180 (238) T ss_dssp EEEE T ss_pred EEEE Confidence 6553No 63>4le3_A Beta-glucanase; GH131, hydrolase; 1.80A {Podospora anserina} PDB: 4le4_A* Probab=68.56 E-value=29 Score=37.35 Aligned_cols=66 Identities=11% Similarity=0.172 Sum_probs=44.0 Q ss_pred CCCceEEEEEcCCCCeEEEEEEEc----ccccCceeEEEEEEecccccceeeeeeecccCCCceEEEEEEEe--cCeEEE Q FBpp0308937 99 LKGGYLFSVVNPLDTVVQLGVHLS----PVVKNSYNVSLVYTQADQNIGRKLASFGVAHVPDKWNSIALQVL--SDKVSF 172 (973) Q Consensus 99 ~~~g~LfsI~~~~~~~~qlgl~ls----g~~~~~~~i~L~Y~~~~~~~~q~~~sF~v~l~dg~WHrlaLsV~--g~~VtL 172 (973) .+..|++...+. .+++|++. ....+. -.|++.... ...|.+++.++.||+|++.|. .++|++ T Consensus 111 ~shEyqi~F~ES----h~~elk~G~~~g~~~~~~--~~l~~~~~~------~~~wstp~~~~~W~NFA~~iDf~~nt~~v 178 (252) T 4le3_A 111 TTREHQIAFFES----HFTELKSGWLSGAPGISD--TLLRWCVGG------QTQWSVEWAADVWHNVAYEIDFAAGTVGF 178 (252) T ss_dssp TTSCEEEEEETT----CSEEEEESCCSSSCCGGG--GEEEEEETT------EEEEEEECCTTCCEEEEEEEETTTTEEEE T ss_pred CCcceeEEeecc----cEEEEEeccccCCCCCCC--CeEEEecCC------ceEEEeeeccCcEEEEEEEeeecCCEEEE Confidence 356787777773 36778775 111111 235555431 346789999999999999988 788998 Q ss_pred EEcc Q FBpp0308937 173 YYDC 176 (973) Q Consensus 173 yVDC 176 (973) |.-- T Consensus 179 ~~S~ 182 (252) T 4le3_A 179 WHST 182 (252) T ss_dssp EEEE T ss_pred EEec Confidence 8744No 64>3w9a_A CCGH131A, putative uncharacterized protein; beta-jelly roll, hydrolase; 1.99A {Coprinopsis cinerea} Probab=62.01 E-value=33 Score=36.84 Aligned_cols=77 Identities=8% Similarity=0.106 Sum_probs=49.6 Q ss_pred ceEEEEEeecc-----CCCCceEEEEEcCCCCeEEEEEEEcccccCceeEEEEEEecccccceeeeeeecccCCCceEEE Q FBpp0308937 87 EFAILITFRQS-----SLKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVYTQADQNIGRKLASFGVAHVPDKWNSI 161 (973) Q Consensus 87 eFSllaT~R~~-----~~~~g~LfsI~~~~~~~~qlgl~lsg~~~~~~~i~L~Y~~~~~~~~q~~~sF~v~l~dg~WHrl 161 (973) .-++.+.||.. ..+..|++...+. .+++|++... .+. -.|+|.... ...|..++.++.||+| T Consensus 93 ~~~~HfSv~~d~~~pln~sheyq~~f~ES----h~felk~G~~-~~~--~~l~~~~~~------~~~wstpf~~~~W~NF 159 (245) T 3w9a_A 93 NLFYHFSIKRTNTNAPDPTLEHQVMFFES----HFTELKYGVG-SNP--SNLGWYAGG------TERWSTPFTADTWFNF 159 (245) T ss_dssp EEEEEEEEECCSTTCCCTTSCEEEEEETT----CSEEEEESCS-SCT--TEEEEEETT------EEEEEEECCTTCCEEE T ss_pred eEEEEEEEEeccccCCcCccceeeecccc----ceEEEEeCCC-CCC--CcEEEecCC------ceEEEeeecCCcEEEE Confidence 34445555543 3455677776663 2688887733 222 236666532 2567899999999999 Q ss_pred EEEEec--CeEEEEEcc Q FBpp0308937 162 ALQVLS--DKVSFYYDC 176 (973) Q Consensus 162 aLsV~g--~~VtLyVDC 176 (973) ++.|.= ..|++|.-- T Consensus 160 Ai~iDf~~nt~~vy~S~ 176 (245) T 3w9a_A 160 AYDIDFTAKTVGLWAST 176 (245) T ss_dssp EEEEETTTTEEEEEEEE T ss_pred EEEeecCCCEEEEEEec Confidence 998855 688888643No 65>2dpr_A Conantokin-T, CON-T; conantoxin, nmdar antagonist, GLA-containing, metal B protein; HET: CGU; 1.70A {Conus tulipa} PDB: 1ont_A* Probab=59.40 E-value=4.9 Score=25.67 Aligned_cols=12 Identities=50% Similarity=0.717 Sum_probs=10.7 Q ss_pred hHHHHHHHHhhh Q FBpp0308937 961 ADEYAAHLENLL 972 (973) Q Consensus 961 ~~~~~~~~~~~~ 972 (973) |+||++.||+|. T Consensus 2 eeeyqemlenlr 13 (21) T 2dpr_A 2 EEEYQEMLENLR 13 (26) T ss_dssp CHHHHHHHHHHH T ss_pred cHHHHHHHHHHH Confidence 689999999985No 66>3zyp_A CIP1; metal binding protein, calcium-binding, CBM-containing, beta sandwich jelly roll, carbohydrate-binding; HET: NAG; 1.50A {Hypocrea jecorina} Probab=54.49 E-value=57 Score=34.37 Aligned_cols=116 Identities=7% Similarity=0.084 Sum_probs=66.4 Q ss_pred CCCCcceEecCCcccCCcchhcc-ccccc--ceEEEEEeeccCC---CCceEEEEEcCCCCeEEEEEEEcccccCceeEE Q FBpp0308937 59 EDGFPAFRFLQTADVKSPYRMLL-PEKLY--EFAILITFRQSSL---KGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVS 132 (973) Q Consensus 59 ~d~~pAy~f~~~a~l~~pt~~lf-p~~~~--eFSllaT~R~~~~---~~g~LfsI~~~~~~~~qlgl~lsg~~~~~~~i~ 132 (973) +.+..+.||...+. ......+| ...++ +|++=+.||..+. +..+||++.+..+... .|++.+... + T Consensus 36 hsG~~Slrv~~ga~-g~~~~~~~~~~a~psg~~y~R~~v~~~~~~~~~h~t~~~~~~~~~~~~--~lRiGgq~~----~- 107 (218) T 3zyp_A 36 HSGSNSMKVVGGPN-GYCGHIFFGTTQVPTGDVYVRAWIRLQTALGSNHVTFIIMPDTAQGGK--HLRIGGQSQ----V- 107 (218) T ss_dssp SSSSCEEEEECCSS-GGGGCEEEEECCCCSSSEEEEEEEEESSCCCSSCEEEEEEEBGGGTTC--EEEEEEETT----E- T ss_pred cCCceeEEEecCCC-CCccceeeeeccCCCCceEEEEEEEeccCCCCCcEEEEEeecCCCCCc--cEEEccccc----e- Confidence 55677888753221 01111111 12233 6777788887543 3447888876644322 456666522 3 Q ss_pred EEEEec-ccc----cceeeeeeecccCCCceEEEEEEEec-CeEEEEEccccceee Q FBpp0308937 133 LVYTQA-DQN----IGRKLASFGVAHVPDKWNSIALQVLS-DKVSFYYDCELRNTT 182 (973) Q Consensus 133 L~Y~~~-~~~----~~q~~~sF~v~l~dg~WHrlaLsV~g-~~VtLyVDC~~~~t~ 182 (973) |.|... +.. .+..-+.-.+.+..++||-|.+.|.. .+++++||-+++... T Consensus 108 l~~n~~sddat~p~~sp~G~a~s~~l~~~~W~C~E~~v~~~g~~~~WldG~~v~~l 163 (218) T 3zyp_A 108 LDYNRESDDATLPDLSPNGIASTVTLPTGAFQCFEYHLGTDGTIETWLNGSLIPGM 163 (218) T ss_dssp EEEEETTTCCEESCSSHHHHHHSCCCCCSSCEEEEEEECSSSCEEEEETTEECGGG T ss_pred eeeeeccCcccccccCCCcccccccccCCcEEEEEEEECCCCeEEEEECCEEeeeE Confidence 344333 211 11011111467789999999999975 579999999998764No 67>3wvj_A Beta-glucanase; thermostability, industrial enzyme, pastoris, A classic beta-jellyroll fold, hydrolase; HET: B3P; 1.95A {Clostridium thermocellum} Probab=49.68 E-value=2.7e+02 Score=28.77 Aligned_cols=65 Identities=15% Similarity=0.264 Sum_probs=42.3 Q ss_pred CCceEEEEEEEecCeEEEEEccccceeee--eecCCcccccCCCceEEEee-----ccc-ccCCccccceEeEEEec Q FBpp0308937 155 PDKWNSIALQVLSDKVSFYYDCELRNTTL--VTREPIELVFDSASTLYIGQ-----AGS-IIGGKFEGYLEKINVYG 223 (973) Q Consensus 155 dg~WHrlaLsV~g~~VtLyVDC~~~~t~~--l~r~~~~l~~~~~~~l~IGq-----~g~-~~~~~F~G~LQ~Lri~~ 223 (973) ...||..+|....+.|++|||-+++.+.. ++..++.|.+ .|++|. .+. .....+.-.|.-+||+. T Consensus 143 ~~~fH~Y~~~W~~~~i~~yvDg~~~~~~~~~~p~~p~~lil----nl~~g~g~~~W~G~~~~~~p~~~~vDyVrvy~ 215 (220) T 3wvj_A 143 SQDFHTYGFEWRPDYIDFYVDGKKVYRGTRNIPVTPGKIMM----NLWPGIGVDEWLGRYDGRTPLQAEYEYVKYYP 215 (220) T ss_dssp TTSCEEEEEEEETTEEEEEETTEEEEEECSSCCCSCEEEEE----EEEEBSSCHHHHCCCCCCCCEEEEEEEEEEES T ss_pred CCCcEEEEEEEECCEEEEEECCEEEEEECCCCCCCCcEEEE----EEECCCCCcCCCCCCCCCCCeEEEEEEEEEEe Confidence 57999999999999999999999887652 3333333332 345552 010 11234566788888875No 68>1buu_A Protein (mannose-binding protein A); lectin, HOST defense, metalloprotein, sugar binding protein; 1.90A {Rattus norvegicus} SCOP: d.169.1.1 h.1.1.1 Probab=47.39 E-value=4.8 Score=39.91 Aligned_cols=12 Identities=25% Similarity=0.656 Sum_probs=10.0 Q ss_pred ccccCCCceEEE Q FBpp0308937 918 RQSCDSKLIILC 929 (973) Q Consensus 918 ~~~C~~~~~~lC 929 (973) ..+|+.++..+| T Consensus 153 d~~C~~~~~~IC 164 (168) T 1buu_A 153 DISCQASHTAVC 164 (168) T ss_dssp EECTTSCEEEEE T ss_pred CcCCCCCeeEEE Confidence 368999998888No 69>1umz_A Xyloglucan endotransglycosylase; glycoside hydrolase, XET, XTH, XEH, transglycosylation, transferase, glycosyltransferase; HET: NAG BMA BGC GAL; 1.8A {Populus tremula} SCOP: b.29.1.2 PDB: 1un1_A* Probab=45.81 E-value=3.6e+02 Score=29.21 Aligned_cols=67 Identities=12% Similarity=0.109 Sum_probs=43.2 Q ss_pred CCceEEEEEEEecCeEEEEEccccceeeee--------ec-CCcccccCCCceEEEeec-----ccc----cCCccccce Q FBpp0308937 155 PDKWNSIALQVLSDKVSFYYDCELRNTTLV--------TR-EPIELVFDSASTLYIGQA-----GSI----IGGKFEGYL 216 (973) Q Consensus 155 dg~WHrlaLsV~g~~VtLyVDC~~~~t~~l--------~r-~~~~l~~~~~~~l~IGq~-----g~~----~~~~F~G~L 216 (973) ...||..+|.-..+.|++|||-+++.+..- +. .++.|. ..|++|.. +.. ....|...+ T Consensus 130 ~~~fHtY~ieWtp~~I~~yVDG~~v~~~~~~~~~g~~~P~~~Pm~li----lnlw~gG~Wat~GG~~~~d~~~~P~~m~v 205 (278) T 1umz_A 130 TKEFHYYSVLWNMYMIVFLVDDVPIRVFKNCKDLGVKFPFNQPMKIY----SSLWNADDWATRGGLEKTDWSKAPFIASY 205 (278) T ss_dssp TTSCEEEEEEECSSEEEEEETTEEEEEEECCGGGTCCCSCSSCBEEE----EEEEECTTTSSGGGTSCCCGGGCCEEEEE T ss_pred CCCCEEEEEEEeCCeEEEEECCEEEEEEecccCCCccCCcCCceEEE----EEEEcCCCccccCCcccccccCCCEEEEE Confidence 579999999999999999999988766421 11 222222 23445431 111 124577789 Q ss_pred EeEEEecCC Q FBpp0308937 217 EKINVYGNP 225 (973) Q Consensus 217 Q~Lri~~dP 225 (973) ..+||+.-. T Consensus 206 d~vrv~~~~ 214 (278) T 1umz_A 206 RSFHIDGCE 214 (278) T ss_dssp EEEEEEEEE T ss_pred EEEEEEecc Confidence 999998543No 70>1cpn_A Circularly permuted; hydrolase(glucanase); 1.80A {Paenibacillus macerans} SCOP: b.29.1.2 PDB: 1cpm_A Probab=43.68 E-value=3.1e+02 Score=28.14 Aligned_cols=69 Identities=16% Similarity=0.270 Sum_probs=46.3 Q ss_pred CCceEEEEEEEecCeEEEEEccccceeee--eecCCcccccCCCceEEEee-----ccc-ccCCccccceEeEEEecCCc Q FBpp0308937 155 PDKWNSIALQVLSDKVSFYYDCELRNTTL--VTREPIELVFDSASTLYIGQ-----AGS-IIGGKFEGYLEKINVYGNPD 226 (973) Q Consensus 155 dg~WHrlaLsV~g~~VtLyVDC~~~~t~~--l~r~~~~l~~~~~~~l~IGq-----~g~-~~~~~F~G~LQ~Lri~~dP~ 226 (973) ...||..+|....+.|++|||-+++.+.. ++..++.|.+ .|+++. .+. .....++..|.-+||+...+ T Consensus 83 ~~~fH~Y~~eW~~~~I~~yvDg~~~~~~~~~~p~~p~~iil----nl~~ggg~~~W~G~~~~~~p~~m~VDyVrvyq~~~ 158 (208) T 1cpn_A 83 SKGFHTYAFDWQPGYIKWYVDGVLKHTATANIPSTPGKIMM----NLWNGTGVDDWLGSYNGANPLYAEYDWVKYTSNGS 158 (208) T ss_dssp GGSCEEEEEEEETTEEEEEETTEEEEEECSSCCCSCBEEEE----EEEEBSSCHHHHCCCCCCCCEEEEEEEEEEEETTE T ss_pred CCCcEEEEEEEECCEEEEEECCEEEEEEcCCCCCCCcEEEE----EEEcCCCcccCCCCCCCCCCeEEEEEEEEEEECCC Confidence 47899999999999999999999887652 3434444432 245543 110 11234667889999997655 Q ss_pred c Q FBpp0308937 227 A 227 (973) Q Consensus 227 ~ 227 (973) . T Consensus 159 ~ 159 (208) T 1cpn_A 159 V 159 (208) T ss_dssp E T ss_pred c Confidence 4No 71>2uwa_A Cellulase; glycoside hydrolase, xyloglucan-endo-transferase, hydrolase, glycosidase, family GH16, tropaeolum majus xyloglucanase; 1.8A {Tropaeolum majus} SCOP: b.29.1.0 PDB: 2uwc_A 2uwb_A 2vh9_A* Probab=42.57 E-value=4e+02 Score=28.74 Aligned_cols=75 Identities=12% Similarity=0.173 Sum_probs=48.0 Q ss_pred CCceEEEEEEEecCeEEEEEccccceeee------eecCCcccccCCCceEEEeec-----c--cc--cCCccccceEeE Q FBpp0308937 155 PDKWNSIALQVLSDKVSFYYDCELRNTTL------VTREPIELVFDSASTLYIGQA-----G--SI--IGGKFEGYLEKI 219 (973) Q Consensus 155 dg~WHrlaLsV~g~~VtLyVDC~~~~t~~------l~r~~~~l~~~~~~~l~IGq~-----g--~~--~~~~F~G~LQ~L 219 (973) ...||..+|....+.|++|||-+++.+.. ++..++.|. ..|++|.. + .+ ....|...+..| T Consensus 141 ~~~fHtY~ieWtp~~I~~yVDg~~v~~~~~~~~~~~P~~Pm~ii----lnlw~gg~Wa~~gG~~~~d~~~~P~~m~vd~V 216 (274) T 2uwa_A 141 TQDYHNYAIYWTPSEIIFFVDDVPIRRYPRKSDATFPLRPLWVY----GSVWDASSWATENGKYKADYRYQPFVGKYEDF 216 (274) T ss_dssp TSSCEEEEEEECSSEEEEEETTEEEEEEECCCGGGSCCSCEEEE----EEEEECTTTTBGGGTBCCCGGGCCEEEEEEEE T ss_pred CCCcEEEEEEEccCeEEEEECCEEEEEEccccccCCCCCccEEE----EeeEecCCccccCCccccCCccCCEEEEEEEE Confidence 57999999999999999999999876642 222222332 23455432 1 01 124577889999 Q ss_pred EEecCCcccccccC Q FBpp0308937 220 NVYGNPDAINVTCM 233 (973) Q Consensus 220 ri~~dP~~~~~~C~ 233 (973) ||+.-.......|. T Consensus 217 rV~~~~~~~~~~C~ 230 (274) T 2uwa_A 217 KLGSCTVEAASSCN 230 (274) T ss_dssp EEEEEETTSCTTCC T ss_pred EEEecCCCCCCCcC Confidence 99865443344564No 72>3i4i_A 1,3-1,4-beta-glucanase; beta-sandwich, hydrolase; 1.89A {Uncultured murine large bowel bacteriuorganism_taxid} SCOP: b.29.1.2 Probab=41.68 E-value=3.7e+02 Score=28.11 Aligned_cols=66 Identities=9% Similarity=0.155 Sum_probs=42.5 Q ss_pred CCCceEEEEEEEecCeEEEEEccccceeee--eecCCcccccCCCceEEEee-----ccc-ccCCccccceEeEEEec Q FBpp0308937 154 VPDKWNSIALQVLSDKVSFYYDCELRNTTL--VTREPIELVFDSASTLYIGQ-----AGS-IIGGKFEGYLEKINVYG 223 (973) Q Consensus 154 ~dg~WHrlaLsV~g~~VtLyVDC~~~~t~~--l~r~~~~l~~~~~~~l~IGq-----~g~-~~~~~F~G~LQ~Lri~~ 223 (973) ....||..+|....+.|++|||-+++.+.. ++..++.|.+ .|+++. .+. .....++-.|..|||+. T Consensus 160 ~~~~fH~Y~ieW~~~~I~~yvDg~~~~~~~~~~P~~p~~lil----nl~~g~g~~~W~g~~~~~~p~~m~VDyVrvy~ 233 (234) T 3i4i_A 160 ASEDFHIYAFNWQPNYIAWLVDGEEVYRAYDDIPVHPGKIML----NIWPGIGVDEWLGAYDGKTNLTASYDWVAYDP 233 (234) T ss_dssp TTTSCEEEEEEEETTEEEEEETTEEEEEECSSCCCSCBEEEE----EEEEBSSCHHHHCCCCCCSCEEEEEEEEEEEC T ss_pred CCCCcEEEEEEEECCEEEEEECCEEEEEEcCCCCCCCcEEEE----EEEcCCCCCCCCCCCCCCCCeEEEEEEEEEEe Confidence 367999999999999999999999887652 3333333332 355552 010 01224556777888764No 73>2ayh_A 1,3-1,4-beta-D-glucan 4-glucanohydrolase; hydrolase (glucanase); 1.60A {Hybrid} SCOP: b.29.1.2 PDB: 1byh_A 1glh_A 1u0a_A* 1mac_A 1gbg_A Probab=38.34 E-value=3.8e+02 Score=27.37 Aligned_cols=65 Identities=15% Similarity=0.281 Sum_probs=41.4 Q ss_pred CCceEEEEEEEecCeEEEEEccccceeee--eecCCcccccCCCceEEEeec-----cc-ccCCccccceEeEEEec Q FBpp0308937 155 PDKWNSIALQVLSDKVSFYYDCELRNTTL--VTREPIELVFDSASTLYIGQA-----GS-IIGGKFEGYLEKINVYG 223 (973) Q Consensus 155 dg~WHrlaLsV~g~~VtLyVDC~~~~t~~--l~r~~~~l~~~~~~~l~IGq~-----g~-~~~~~F~G~LQ~Lri~~ 223 (973) ...||..+|....+.|++|||-+++.+.. ++..++.|.+ .|+++.. +. .....++..|.-+|++. T Consensus 141 ~~~fH~Y~~~W~~~~i~~yvDg~~~~~~~~~~p~~p~~l~l----nl~~ggg~~~w~g~~~~~~p~~m~VDyVrvy~ 213 (214) T 2ayh_A 141 SKGFHTYAFDWQPGYIKWYVDGVLKHTATANIPSTPGKIMM----NLWNGTGVDDWLGSYNGANPLYAEYDWVKYTS 213 (214) T ss_dssp GGSCEEEEEEEETTEEEEEETTEEEEEECSSCCCSCBEEEE----EEEEBSSCHHHHCCCCCCCCEEEEEEEEEEEE T ss_pred cCCcEEEEEEEECCEEEEEECCEEEEEEcCCCCCCCcEEEE----EEEcCCCCccCCCCCCCCCCEEEEEEEEEEEc Confidence 47899999999999999999999887653 3333333332 2455520 10 01123555677777763No 74>3o5s_A Beta-glucanase; glycosyl hydrolase, beta-jelly roll, hydrolase; HET: B3P; 2.20A {Bacillus subtilis} SCOP: b.29.1.2 PDB: 3d6e_A Probab=36.93 E-value=4.2e+02 Score=27.71 Aligned_cols=28 Identities=18% Similarity=0.488 Sum_probs=25.5 Q ss_pred CCceEEEEEEEecCeEEEEEccccceee Q FBpp0308937 155 PDKWNSIALQVLSDKVSFYYDCELRNTT 182 (973) Q Consensus 155 dg~WHrlaLsV~g~~VtLyVDC~~~~t~ 182 (973) ...||..+|....+.|++|||-+++.+. T Consensus 165 ~~~fH~Y~~eW~~~~I~~yvDg~~~~~~ 192 (238) T 3o5s_A 165 ANAYHTYAFDWQPNSIKWYVDGQLKHTA 192 (238) T ss_dssp GGSCEEEEEEECSSCEEEEETTEEEEEE T ss_pred CCCCEEEEEEEECCEEEEEECCEEEEEE Confidence 5789999999999999999999988765No 75>1axk_A Gluxyn-1; bifunctional, fusion protein, 1,4-beta-xylanase, 1,3-1,4-beta-glucanase, hybrid enzyme; 2.10A {Bacillus subtilis} SCOP: b.29.1.2 b.29.1.11 Probab=35.76 E-value=4e+02 Score=30.54 Aligned_cols=68 Identities=13% Similarity=0.240 Sum_probs=45.4 Q ss_pred CCceEEEEEEEecCeEEEEEccccceeee--eecCCcccccCCCceEEEeec------ccccCCccccceEeEEEecCCc Q FBpp0308937 155 PDKWNSIALQVLSDKVSFYYDCELRNTTL--VTREPIELVFDSASTLYIGQA------GSIIGGKFEGYLEKINVYGNPD 226 (973) Q Consensus 155 dg~WHrlaLsV~g~~VtLyVDC~~~~t~~--l~r~~~~l~~~~~~~l~IGq~------g~~~~~~F~G~LQ~Lri~~dP~ 226 (973) ...||..+|....+.|++|||-+++.+.. ++..++.|.| .|+++.. .......+...|..|||+.... T Consensus 83 ~~~FHtY~veWtp~~I~wyVDG~~v~t~~~~~P~~P~~liL----NlwvGgg~g~W~G~p~~~~P~~m~VDyVRVYq~~~ 158 (394) T 1axk_A 83 SKGFHTYAFDWQPGYIKWYVDGVLKHTATANIPSTPGKIMM----NLWNGTGVDDWLGSYNGANPLYAEYDWVKYTSNAS 158 (394) T ss_dssp GGSCEEEEEEEETTEEEEEETTEEEEEECSSCCCSCBEEEE----EEEEBSSCHHHHCCCCCCCCEEEEEEEEEEEECCC T ss_pred CCCeEEEEEEEECCEEEEEECCEEEEEECCCCCCCCeEEEE----EEEccCCccccCCCCCCCCCeEEEEEEEEeeccCC Confidence 46899999999999999999999877652 3334444433 2555520 0112235667889999987543No 76>3s5q_A Putative glycosylhydrolase; concanavalin A-like lectins/glucanases, structural genomics, center for structural genomics, JCSG; 1.85A {Parabacteroides distasonis} Probab=32.09 E-value=50 Score=34.48 Aligned_cols=28 Identities=11% Similarity=0.369 Sum_probs=25.6 Q ss_pred CCceEEEEEEEecCeEEEEEccccceee Q FBpp0308937 155 PDKWNSIALQVLSDKVSFYYDCELRNTT 182 (973) Q Consensus 155 dg~WHrlaLsV~g~~VtLyVDC~~~~t~ 182 (973) .++|+++.|.|.+++|+.||+-.++... T Consensus 132 ~geWn~~~I~~~g~~i~v~lNG~~v~~~ 159 (214) T 3s5q_A 132 PGEWNRMIITAKGQQIDIELNGKHIVSA 159 (214) T ss_dssp TTSEEEEEEEEETTEEEEEETTEEEEEE T ss_pred CCceEEEEEEEECCEEEEEECCEEEEEE Confidence 6899999999999999999999888654No 77>3i8t_A Galectin-4; S-type lectin, carbohydrate binding, molecular recognition, sugar binding protein; HET: LBT; 2.10A {Mus musculus} SCOP: b.29.1.0 PDB: 2dyc_A Probab=31.89 E-value=4.4e+02 Score=26.18 Aligned_cols=119 Identities=13% Similarity=0.087 Sum_probs=59.1 Q ss_pred CCcceEecCCcc----cCCcchhccccccc-ceEEEEEeeccCCCCceEEEEEcCCCCeEEEEEEEcccccCceeEEEEE Q FBpp0308937 61 GFPAFRFLQTAD----VKSPYRMLLPEKLY-EFAILITFRQSSLKGGYLFSVVNPLDTVVQLGVHLSPVVKNSYNVSLVY 135 (973) Q Consensus 61 ~~pAy~f~~~a~----l~~pt~~lfp~~~~-eFSllaT~R~~~~~~g~LfsI~~~~~~~~qlgl~lsg~~~~~~~i~L~Y 135 (973) ..|||....... ...|....+|.+|. .-+|+++=+.......+-+.+.........+.|.++.+-+....|..-. T Consensus 11 ~~~~~~~~~~~~~~~~p~vPf~~~ip~gL~~G~~I~I~G~v~~~a~rF~Inl~~g~~~~~dIalHfnpRf~~~~~IV~NS 90 (164) T 3i8t_A 11 TDPAYVPAPGYQPTYNPTLPYKRPIPGGLSVGMSVYIQGMAKENMRRFHVNFAVGQDDGADVAFHFNPRFDGWDKVVFNT 90 (164) T ss_dssp --------------CCCCSSEEEECTTCCCTTCEEEEEEEECTTCCBEEEEEESSSSTTCCEEEEEEEECSSSCEEEEEE T ss_pred CCcccccCCCCCcccCCCCCEEeecCCCCcCCCEEEEEEEECCCCCEEEEEeccCCCCCCCEEEEEeeeeCCCCEEEEEc Confidence 467887775543 35678888888884 5555555555444445555565432112234444444322101232222 Q ss_pred Eecccccceeeeee-ecccCCCceEEEEEEEecCeEEEEEcccccee Q FBpp0308937 136 TQADQNIGRKLASF-GVAHVPDKWNSIALQVLSDKVSFYYDCELRNT 181 (973) Q Consensus 136 ~~~~~~~~q~~~sF-~v~l~dg~WHrlaLsV~g~~VtLyVDC~~~~t 181 (973) .. .+. +..-... ..+...|+=-.|.|.+..+...++||-....+ T Consensus 91 ~~-~g~-WG~EEr~~~~PF~~G~~F~l~I~~~~~~f~V~VNg~~~~~ 135 (164) T 3i8t_A 91 MQ-SGQ-WGKEEKKKSMPFQKGKHFELVFMVMPEHYKVVVNGNSFYE 135 (164) T ss_dssp EE-TTE-ECCCEEESCCCCCTTCEEEEEEEECSSEEEEEETTEEEEE T ss_pred cc-CCE-eCCCcccCCCCCccCCEEEEEEEEccCEEEEEECCEEEEE Confidence 22 211 2111111 35667888889999999999999999876544No 78>1o91_A Collagen alpha 1(VIII) chain; C1Q_LIKE_domain, extracellular matrix, adhesion, connective tissue, repeat, structural protein; HET: CPS; 1.9A {Mus musculus} SCOP: b.22.1.1 Probab=31.47 E-value=12 Score=38.05 Aligned_cols=6 Identities=33% Similarity=1.010 Sum_probs=2.3 Q ss_pred ceeEEE Q FBpp0308937 802 TFKAFL 807 (973) Q Consensus 802 t~rA~L 807 (973) ||-.|| T Consensus 169 tFSGfL 174 (178) T 1o91_A 169 SFSGYL 174 (178) T ss_dssp EEEEEE T ss_pred EEEEEE Confidence 333333No 79>1dyp_A Kappa-carrageenase; hydrolase, kappa-carrageenan double helix degradation; HET: MSE; 1.54A {Pseudoalteromonas carrageenovora} SCOP: b.29.1.2 Probab=30.52 E-value=97 Score=33.16 Aligned_cols=29 Identities=21% Similarity=0.448 Sum_probs=26.0 Q ss_pred CCceEEEEEEEecCeEEEEEccccceeee Q FBpp0308937 155 PDKWNSIALQVLSDKVSFYYDCELRNTTL 183 (973) Q Consensus 155 dg~WHrlaLsV~g~~VtLyVDC~~~~t~~ 183 (973) ...||..+|....++|++|||-+++.+.. T Consensus 189 ~~~fH~Y~veW~~~~I~~yvDG~~~~~~~ 217 (271) T 1dyp_A 189 RNDFHTYGVNVTKDKITWYVDGEIVGEKD 217 (271) T ss_dssp TSSCEEEEEEECSSEEEEEETTEEEEEEE T ss_pred CCCeEEEEEEEECCEEEEEECCEEEeeec Confidence 57999999999999999999999887653No 80>1o91_A Collagen alpha 1(VIII) chain; C1Q_LIKE_domain, extracellular matrix, adhesion, connective tissue, repeat, structural protein; HET: CPS; 1.9A {Mus musculus} SCOP: b.22.1.1 Probab=29.05 E-value=14 Score=37.56 Aligned_cols=55 Identities=25% Similarity=0.349 Sum_probs=26.4 Q ss_pred CcEEecCccccccCCCCcccCCCc-eeecCCCccCCCCCCCcceEEeeCCCCcccccccccc Q FBpp0308937 832 GDVLFNSWKGIFNGQGGFFSQAPR-IYSFSGKNVMTDSTWPMKMVWHGSLPNGERSMDTYCD 892 (973) Q Consensus 832 g~vl~~~~~~l~~~~~~~~~~~~~-i~~f~~~~~~~~~~~~~k~vw~Gs~~~g~~~~~~~C~ 892 (973) +.|+.|.-...-. ..++|+...+ +|.|+=+-.. ..+.+|..+..++......+|+ T Consensus 70 d~v~~N~G~~yn~-~TG~FTapv~G~Y~Fs~~~~~-----~~~~~~v~L~~Ng~~~~~~~~~ 125 (178) T 1o91_A 70 DKLLYNGRQNYNP-QTGIFTCEVPGVYYFAYHVHC-----KGGNVWVALFKNNEPMMYTYDE 125 (178) T ss_dssp CEEEEEETTCEET-TTTEEECCSCEEEEEEEEEEE-----EEEEEEEEEEETTEEEEEEEEC T ss_pred CEEEEcCCCCccC-CCCeEEeeCCeEEEEEEEEEe-----CCceEEEEEEECCEEEEEEEec Confidence 4555554333332 3345665555 7755332211 1245666666666655444443No 81>1ajk_A CPA16M-84, circularly permuted (1-3,1-4)-beta-D-glucan 4- glucanohydrolase; glucanase, circular permutation; HET: EPE; 1.80A {Paenibacillus macerans} SCOP: b.29.1.2 Probab=28.75 E-value=1.4e+02 Score=31.07 Aligned_cols=68 Identities=16% Similarity=0.278 Sum_probs=45.1 Q ss_pred CCceEEEEEEEecCeEEEEEccccceeee--eecCCcccccCCCceEEEee-----ccc-ccCCccccceEeEEEecCCc Q FBpp0308937 155 PDKWNSIALQVLSDKVSFYYDCELRNTTL--VTREPIELVFDSASTLYIGQ-----AGS-IIGGKFEGYLEKINVYGNPD 226 (973) Q Consensus 155 dg~WHrlaLsV~g~~VtLyVDC~~~~t~~--l~r~~~~l~~~~~~~l~IGq-----~g~-~~~~~F~G~LQ~Lri~~dP~ 226 (973) ...||..+|.-..+.|++|||-+++.+.. ++..++.|.+ .|+++. .+. .....+.-.|..|||+.... T Consensus 58 ~~~fHtY~ieW~~~~I~~yvDg~~~~~~~~~~P~~p~~lil----nl~~ggg~~~W~G~~~~~~p~~m~VDyVrvy~~~~ 133 (214) T 1ajk_A 58 SKGFHTYAFDWQPGYIKWYVDGVLKHTATANIPSTPGKIMM----NLWNGTGVDDWLGSYNGANPLYAEYDWVKYTSNQT 133 (214) T ss_dssp GGSCEEEEEEEETTEEEEEETTEEEEEECSSCCCSCBEEEE----EEEECC--CGGGGTCCTTSCEEEEEEEEEEEESST T ss_pred CCCcEEEEEEEECCEEEEEECCEEEEEEcCCCCCCCcEEEE----EEEcCCCccccCCCCCCCCCeEEEEEEEEEEECcc Confidence 47899999999999999999999887652 3333434332 245542 110 11234566889999987554No 82>1ajo_A CPA16M-127, circularly permuted (1-3,1-4)-beta-D-glucan 4- glucanohydrolase CPA16M-127; glucanase, circular permutation; 2.07A {Paenibacillus macerans} SCOP: b.29.1.2 Probab=27.99 E-value=1.2e+02 Score=31.46 Aligned_cols=67 Identities=15% Similarity=0.270 Sum_probs=43.7 Q ss_pred CCceEEEEEEEecCeEEEEEccccceeee--eecCCcccccCCCceEEEeec-----c-cccCCccccceEeEEEecCC Q FBpp0308937 155 PDKWNSIALQVLSDKVSFYYDCELRNTTL--VTREPIELVFDSASTLYIGQA-----G-SIIGGKFEGYLEKINVYGNP 225 (973) Q Consensus 155 dg~WHrlaLsV~g~~VtLyVDC~~~~t~~--l~r~~~~l~~~~~~~l~IGq~-----g-~~~~~~F~G~LQ~Lri~~dP 225 (973) ...||..+|.-..+.|++|||-+++.+.. ++..++.|.+ .|+++.. + ......+.-.|.-++++... T Consensus 15 ~~~fH~Y~~eW~~~~i~~~vDg~~~~~~~~~~P~~p~~lil----nl~~g~g~~~W~g~~~~~~p~~m~vDyVrvy~~~ 89 (214) T 1ajo_A 15 SKGFHTYAFDWQPGYIKWYVDGVLKHTATANIPSTPGKIMM----NLWNGTGVDDWLGSYNGANPLYAEYDWVKYTSNQ 89 (214) T ss_dssp GGSCEEEEEEEETTEEEEEETTEEEEEECSSCCCSCBEEEE----EEEEBSSCHHHHCCCCCCCCEEEEEEEEEEEESS T ss_pred cCCcEEEEEEEeCCeEEEEECCEEEEEEcCCCCCCCcEEEE----EEEecCCccccCCCCCcCCCceEEEEEEEEeecc Confidence 56899999999999999999999887753 3434444432 3555520 0 01123445567778887655No 83>3h0o_A Beta-glucanase; 1,3-1,4-beta-D-glucanase, CH-PI stacking interactions, TRIS inhibition, hydrolase, glycosidase; 1.40A {Fibrobacter succinogenes} SCOP: b.29.1.2 PDB: 1mve_A 1zm1_A* 3hr9_A 2r49_A 3axd_A 3axe_A* Probab=24.63 E-value=7e+02 Score=26.15 Aligned_cols=70 Identities=14% Similarity=0.173 Sum_probs=43.5 Q ss_pred CCCceEEEEEEEecCeEEEEEccccceeeeee-----cCCcccccCCCceEEEeec----ccccC--CccccceEeEEEe Q FBpp0308937 154 VPDKWNSIALQVLSDKVSFYYDCELRNTTLVT-----REPIELVFDSASTLYIGQA----GSIIG--GKFEGYLEKINVY 222 (973) Q Consensus 154 ~dg~WHrlaLsV~g~~VtLyVDC~~~~t~~l~-----r~~~~l~~~~~~~l~IGq~----g~~~~--~~F~G~LQ~Lri~ 222 (973) ....||..+|.-..+.|++|||-+++.+..-. ..++.|.+ .|+++-. +.... ..+.-.|..+||+ T Consensus 91 ~~~~fH~Y~ieW~~~~I~wyVDg~~~~t~~~~~~~~~~~p~~lil----nlw~~~~~~w~G~~d~~~~P~~m~VDyVrvy 166 (240) T 3h0o_A 91 ADQAFHTYGLEWTPNYVRWTVDGQEVRKTEGGQVSNLTGTQGLRF----NLWSSESAAWVGQFDESKLPLFQFINWVKVY 166 (240) T ss_dssp TTTSCEEEEEEECSSCEEEEETTEEEEEECSHHHHTCCSCBEEEE----EEEEBSCHHHHCSCCGGGCCEEEEEEEEEEE T ss_pred CCCCcEEEEEEEECCEEEEEECCEEEEEEeccccCCCCCCceEEE----EEeecCCCccCCcCCCcCCCeEEEEEEEEEE Confidence 45899999999999999999999988765321 11222222 2333211 11111 2456678999999 Q ss_pred cCCcc Q FBpp0308937 223 GNPDA 227 (973) Q Consensus 223 ~dP~~ 227 (973) .-... T Consensus 167 ~~~~~ 171 (240) T 3h0o_A 167 KYTPG 171 (240) T ss_dssp EECTT T ss_pred EcCCC Confidence 65444No 84>3iln_A Laminarinase; jelly ROW, hydrolase, family 16 glycosyl hydrolase; 1.95A {Rhodothermus marinus} Probab=22.60 E-value=6.6e+02 Score=26.23 Aligned_cols=34 Identities=12% Similarity=0.238 Sum_probs=28.5 Q ss_pred eecccCCCceEEEEEEEecCeEEEEEccccceee Q FBpp0308937 149 FGVAHVPDKWNSIALQVLSDKVSFYYDCELRNTT 182 (973) Q Consensus 149 F~v~l~dg~WHrlaLsV~g~~VtLyVDC~~~~t~ 182 (973) +........||..+|....+.|++|||-+++.+. T Consensus 158 ~~~~~~~~~fH~Y~~eW~~~~I~~~vDg~~~~~~ 191 (251) T 3iln_A 158 IRVPTARTDFHVYAIEWTPEEIRWFVDDSLYYRF 191 (251) T ss_dssp EECTTTTTSCEEEEEEECSSEEEEEETTEEEEEE T ss_pred EeCCCCCCCCEEEEEEEECCEEEEEECCEEEEEE Confidence 3444557899999999999999999999887665No 85>1buu_A Protein (mannose-binding protein A); lectin, HOST defense, metalloprotein, sugar binding protein; 1.90A {Rattus norvegicus} SCOP: d.169.1.1 h.1.1.1 Probab=21.55 E-value=24 Score=34.81 Aligned_cols=6 Identities=17% Similarity=0.373 Sum_probs=2.7 Q ss_pred chhhhH Q FBpp0308937 786 ADFACY 791 (973) Q Consensus 786 aD~~C~ 791 (973) |..+|+ T Consensus 71 A~~~C~ 76 (168) T 1buu_A 71 VKALCS 76 (168) T ss_dssp HHHHHH T ss_pred HHHHHH Confidence 444444