BLASTP 2.2.22 [Sep-27-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.


Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= gi|254780122|ref|YP_003064535.1| hypothetical protein
CLIBASIA_00005 [Candidatus Liberibacter asiaticus str. psy62]
         (123 letters)

Database: nr 
           13,841,106 sequences; 4,750,259,772 total letters

Searching..................................................done


Results from round 1


>gi|254780122|ref|YP_003064535.1| hypothetical protein CLIBASIA_00005 [Candidatus Liberibacter
           asiaticus str. psy62]
 gi|254039799|gb|ACT56595.1| hypothetical protein CLIBASIA_00005 [Candidatus Liberibacter
           asiaticus str. psy62]
 gi|317120736|gb|ADV02558.1| hypothetical protein SC2_gp185 [Liberibacter phage SC2]
 gi|317120797|gb|ADV02618.1| hypothetical protein SC2_gp185 [Liberibacter phage SC2]
          Length = 123

 Score =  253 bits (645), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 123/123 (100%), Positives = 123/123 (100%)

Query: 1   MGALKNHFHDEINENFYFHSHPNADPDISIEMQISENQRYLDEEISQCNAVVDVFKRSDS 60
           MGALKNHFHDEINENFYFHSHPNADPDISIEMQISENQRYLDEEISQCNAVVDVFKRSDS
Sbjct: 1   MGALKNHFHDEINENFYFHSHPNADPDISIEMQISENQRYLDEEISQCNAVVDVFKRSDS 60

Query: 61  TILDKLDAMDDLKTYISLLQATAKNLKSLLKEYWEESLDGEDDEEIYEHPDQEHREDYYA 120
           TILDKLDAMDDLKTYISLLQATAKNLKSLLKEYWEESLDGEDDEEIYEHPDQEHREDYYA
Sbjct: 61  TILDKLDAMDDLKTYISLLQATAKNLKSLLKEYWEESLDGEDDEEIYEHPDQEHREDYYA 120

Query: 121 NQI 123
           NQI
Sbjct: 121 NQI 123


>gi|317120693|gb|ADV02516.1| hypothetical protein SC1_gp185 [Liberibacter phage SC1]
 gi|317120837|gb|ADV02658.1| hypothetical protein SC1_gp185 [Liberibacter phage SC1]
          Length = 123

 Score =  251 bits (640), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 122/123 (99%), Positives = 123/123 (100%)

Query: 1   MGALKNHFHDEINENFYFHSHPNADPDISIEMQISENQRYLDEEISQCNAVVDVFKRSDS 60
           MGALKNHFHDEINENFYFHSHPNADPDISIEMQISENQRYLDEEISQCNAVVDVFKRSDS
Sbjct: 1   MGALKNHFHDEINENFYFHSHPNADPDISIEMQISENQRYLDEEISQCNAVVDVFKRSDS 60

Query: 61  TILDKLDAMDDLKTYISLLQATAKNLKSLLKEYWEESLDGEDDEEIYEHPDQEHREDYYA 120
           TILDKLDA+DDLKTYISLLQATAKNLKSLLKEYWEESLDGEDDEEIYEHPDQEHREDYYA
Sbjct: 61  TILDKLDAVDDLKTYISLLQATAKNLKSLLKEYWEESLDGEDDEEIYEHPDQEHREDYYA 120

Query: 121 NQI 123
           NQI
Sbjct: 121 NQI 123


>gi|315121961|ref|YP_004062450.1| hypothetical protein CKC_01055 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
 gi|315122929|ref|YP_004063418.1| hypothetical protein CKC_05925 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
 gi|313495363|gb|ADR51962.1| hypothetical protein CKC_01055 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
 gi|313496331|gb|ADR52930.1| hypothetical protein CKC_05925 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
          Length = 128

 Score = 77.8 bits (190), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 57/129 (44%), Positives = 81/129 (62%), Gaps = 7/129 (5%)

Query: 1   MGALKNHFHDEINENFYFHSHPNA------DPDISIEMQISENQRYLDEEISQCNAVVDV 54
           MG LK H+ +EI  N+ F+   N       +P+ SI+ ++ E  R LD+    C  +V  
Sbjct: 1   MGKLKQHYMEEIEANYEFNCLNNPRFNLDPEPEPSIKEEVEELIRSLDQRFLWCCDLVRD 60

Query: 55  FKRSDSTILDKLDAMDDLKTYISLLQATAKNLKSLLKEYWEESLDGEDDEEIYEHPDQEH 114
            +RSD TILDKLDAM++++ Y+S+L+ TA  L+ LLKE   E  + E +EE  EHPDQEH
Sbjct: 61  LQRSDYTILDKLDAMEEMRMYLSVLRPTANRLEDLLKES-WEEPEKEPEEEPREHPDQEH 119

Query: 115 REDYYANQI 123
            + YYA+QI
Sbjct: 120 ADAYYADQI 128


>gi|254781220|ref|YP_003065633.1| hypothetical protein CLIBASIA_05635 [Candidatus Liberibacter
           asiaticus str. psy62]
 gi|254040897|gb|ACT57693.1| hypothetical protein CLIBASIA_05635 [Candidatus Liberibacter
           asiaticus str. psy62]
 gi|317120684|gb|ADV02507.1| hypothetical protein SC1_gp135 [Liberibacter phage SC1]
 gi|317120726|gb|ADV02548.1| hypothetical protein SC2_gp135 [Liberibacter phage SC2]
 gi|317120787|gb|ADV02608.1| hypothetical protein SC2_gp135 [Liberibacter phage SC2]
 gi|317120828|gb|ADV02649.1| hypothetical protein SC1_gp135 [Liberibacter phage SC1]
          Length = 130

 Score = 50.8 bits (120), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 43/135 (31%), Positives = 69/135 (51%), Gaps = 17/135 (12%)

Query: 1   MGALKNHFHDEINENFYFHSHPNA----DPDISIEMQISENQRYLDEEISQCNAVVDVFK 56
           MG LK ++ +EI  N+ F S  N     +P+ + E+++ E    L+  +     ++    
Sbjct: 1   MGQLKQYYLEEIEANYEFLSAVNPRMGIEPESNYEVEVIEK---LERALKTSKKLIHFRD 57

Query: 57  RSDST-ILDKLDAMDDLKTYISLLQATAKNLKSLL---KEYW----EESLDGEDDEEIYE 108
           R+  T IL+  D ++++   I L +A  + L+  +    E W    E   D E  E   E
Sbjct: 58  RTIRTHILE--DLIEEVNRIIVLAKAHKRRLELKIFEDNEVWRLLDEAREDCEGCENCSE 115

Query: 109 HPDQEHREDYYANQI 123
           HPDQEH+EDYYA+QI
Sbjct: 116 HPDQEHKEDYYASQI 130


>gi|58262484|ref|XP_568652.1| heat shock protein [Cryptococcus neoformans var. neoformans JEC21]
 gi|134118960|ref|XP_771983.1| hypothetical protein CNBN1630 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50254587|gb|EAL17336.1| hypothetical protein CNBN1630 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|57230826|gb|AAW47135.1| heat shock protein, putative [Cryptococcus neoformans var.
           neoformans JEC21]
          Length = 798

 Score = 34.3 bits (77), Expect = 6.6,   Method: Composition-based stats.
 Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 8/97 (8%)

Query: 29  SIEMQISENQRYLD-EEISQCNAVVDVFKRSDSTILDKLDAMDDLKTYISLLQATAKNLK 87
           S  + I+ +QR L  EEI +     + F   D+ +  K++AM++L+ +I  L++   + +
Sbjct: 610 SESITITNDQRRLSPEEIERMVQEAEEFADEDAAVKRKIEAMNNLQNFIFSLKSQIGDAE 669

Query: 88  SLLKEYWEESLD------GEDDEEIYEHPDQEHREDY 118
            L  +  E+  D       E  E + EHP Q   EDY
Sbjct: 670 GLGGKLSEDDKDTILSAIKEKTEWLDEHP-QSDAEDY 705


>gi|300868806|ref|ZP_07113413.1| two-component signalling protein HstK (Ser/thr & His kinase domains)
            [Oscillatoria sp. PCC 6506]
 gi|300333157|emb|CBN58605.1| two-component signalling protein HstK (Ser/thr & His kinase domains)
            [Oscillatoria sp. PCC 6506]
          Length = 1893

 Score = 33.9 bits (76), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 41/88 (46%), Gaps = 14/88 (15%)

Query: 7    HFHDEINE-NFYFHSHPNADPDIS-------IEMQISENQRYLD------EEISQCNAVV 52
            +FHD +   N Y    PNA P+I+       +E  IS+  R LD      E I Q    +
Sbjct: 1646 YFHDLLGVLNLYQQQLPNATPEINNLAENVDLEFLISDFPRLLDSMQVGAERIRQIVLSL 1705

Query: 53   DVFKRSDSTILDKLDAMDDLKTYISLLQ 80
              F R D  ++ ++D  + L + + LLQ
Sbjct: 1706 RNFSRLDEAVMKEVDIHEGLDSTLLLLQ 1733


>gi|7635897|emb|CAA89834.2| luminal binding protein [Pseudotsuga menziesii]
          Length = 675

 Score = 33.9 bits (76), Expect = 7.7,   Method: Composition-based stats.
 Identities = 20/72 (27%), Positives = 37/72 (51%), Gaps = 5/72 (6%)

Query: 35  SENQRYLDEEISQCNAVVDVFKRSDSTILDKLDAMDDLKTYISLLQATAKNLKSLLKEYW 94
           ++  R   EEI +     + F   D  + DK+DA ++L+TY+  +++T        K+  
Sbjct: 547 NDKGRLSQEEIERMVKEAEEFAEEDKKVKDKIDARNNLETYVYNMKSTINE-----KDKL 601

Query: 95  EESLDGEDDEEI 106
            + +D ED E+I
Sbjct: 602 ADKIDSEDKEKI 613


>gi|321265704|ref|XP_003197568.1| kar2 karyogamy protein [Cryptococcus gattii WM276]
 gi|317464048|gb|ADV25781.1| Kar2 karyogamy protein, putative [Cryptococcus gattii WM276]
          Length = 744

 Score = 33.5 bits (75), Expect = 9.6,   Method: Composition-based stats.
 Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 8/97 (8%)

Query: 29  SIEMQISENQRYLD-EEISQCNAVVDVFKRSDSTILDKLDAMDDLKTYISLLQATAKNLK 87
           S  + I+ +QR L  EEI +     + F   D+ I  K++AM+ L+ +I  L++   + +
Sbjct: 545 SESITITNDQRRLSPEEIERMVQEAEEFADEDAAIKRKIEAMNGLQNFIFSLKSQINDAE 604

Query: 88  SLLKEYWEESLD------GEDDEEIYEHPDQEHREDY 118
            L  +  E+  D       E  E + EHP Q   EDY
Sbjct: 605 GLGGKLSEDDKDTILSAIKEKTEWLDEHP-QADAEDY 640


Searching..................................................done


Results from round 2





CONVERGED!
>gi|254780122|ref|YP_003064535.1| hypothetical protein CLIBASIA_00005 [Candidatus Liberibacter
           asiaticus str. psy62]
 gi|254039799|gb|ACT56595.1| hypothetical protein CLIBASIA_00005 [Candidatus Liberibacter
           asiaticus str. psy62]
 gi|317120736|gb|ADV02558.1| hypothetical protein SC2_gp185 [Liberibacter phage SC2]
 gi|317120797|gb|ADV02618.1| hypothetical protein SC2_gp185 [Liberibacter phage SC2]
          Length = 123

 Score =  160 bits (404), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 123/123 (100%), Positives = 123/123 (100%)

Query: 1   MGALKNHFHDEINENFYFHSHPNADPDISIEMQISENQRYLDEEISQCNAVVDVFKRSDS 60
           MGALKNHFHDEINENFYFHSHPNADPDISIEMQISENQRYLDEEISQCNAVVDVFKRSDS
Sbjct: 1   MGALKNHFHDEINENFYFHSHPNADPDISIEMQISENQRYLDEEISQCNAVVDVFKRSDS 60

Query: 61  TILDKLDAMDDLKTYISLLQATAKNLKSLLKEYWEESLDGEDDEEIYEHPDQEHREDYYA 120
           TILDKLDAMDDLKTYISLLQATAKNLKSLLKEYWEESLDGEDDEEIYEHPDQEHREDYYA
Sbjct: 61  TILDKLDAMDDLKTYISLLQATAKNLKSLLKEYWEESLDGEDDEEIYEHPDQEHREDYYA 120

Query: 121 NQI 123
           NQI
Sbjct: 121 NQI 123


>gi|317120693|gb|ADV02516.1| hypothetical protein SC1_gp185 [Liberibacter phage SC1]
 gi|317120837|gb|ADV02658.1| hypothetical protein SC1_gp185 [Liberibacter phage SC1]
          Length = 123

 Score =  159 bits (403), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 122/123 (99%), Positives = 123/123 (100%)

Query: 1   MGALKNHFHDEINENFYFHSHPNADPDISIEMQISENQRYLDEEISQCNAVVDVFKRSDS 60
           MGALKNHFHDEINENFYFHSHPNADPDISIEMQISENQRYLDEEISQCNAVVDVFKRSDS
Sbjct: 1   MGALKNHFHDEINENFYFHSHPNADPDISIEMQISENQRYLDEEISQCNAVVDVFKRSDS 60

Query: 61  TILDKLDAMDDLKTYISLLQATAKNLKSLLKEYWEESLDGEDDEEIYEHPDQEHREDYYA 120
           TILDKLDA+DDLKTYISLLQATAKNLKSLLKEYWEESLDGEDDEEIYEHPDQEHREDYYA
Sbjct: 61  TILDKLDAVDDLKTYISLLQATAKNLKSLLKEYWEESLDGEDDEEIYEHPDQEHREDYYA 120

Query: 121 NQI 123
           NQI
Sbjct: 121 NQI 123


>gi|315121961|ref|YP_004062450.1| hypothetical protein CKC_01055 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
 gi|315122929|ref|YP_004063418.1| hypothetical protein CKC_05925 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
 gi|313495363|gb|ADR51962.1| hypothetical protein CKC_01055 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
 gi|313496331|gb|ADR52930.1| hypothetical protein CKC_05925 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
          Length = 128

 Score =  122 bits (305), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 54/129 (41%), Positives = 78/129 (60%), Gaps = 7/129 (5%)

Query: 1   MGALKNHFHDEINENFYFHSHPNA------DPDISIEMQISENQRYLDEEISQCNAVVDV 54
           MG LK H+ +EI  N+ F+   N       +P+ SI+ ++ E  R LD+    C  +V  
Sbjct: 1   MGKLKQHYMEEIEANYEFNCLNNPRFNLDPEPEPSIKEEVEELIRSLDQRFLWCCDLVRD 60

Query: 55  FKRSDSTILDKLDAMDDLKTYISLLQATAKNLKSLLKEYWEESLDGEDDEEIYEHPDQEH 114
            +RSD TILDKLDAM++++ Y+S+L+ TA  L+ LLKE WEE     ++E      DQEH
Sbjct: 61  LQRSDYTILDKLDAMEEMRMYLSVLRPTANRLEDLLKESWEEPEKEPEEEPREHP-DQEH 119

Query: 115 REDYYANQI 123
            + YYA+QI
Sbjct: 120 ADAYYADQI 128


>gi|254781220|ref|YP_003065633.1| hypothetical protein CLIBASIA_05635 [Candidatus Liberibacter
           asiaticus str. psy62]
 gi|254040897|gb|ACT57693.1| hypothetical protein CLIBASIA_05635 [Candidatus Liberibacter
           asiaticus str. psy62]
 gi|317120684|gb|ADV02507.1| hypothetical protein SC1_gp135 [Liberibacter phage SC1]
 gi|317120726|gb|ADV02548.1| hypothetical protein SC2_gp135 [Liberibacter phage SC2]
 gi|317120787|gb|ADV02608.1| hypothetical protein SC2_gp135 [Liberibacter phage SC2]
 gi|317120828|gb|ADV02649.1| hypothetical protein SC1_gp135 [Liberibacter phage SC1]
          Length = 130

 Score =  110 bits (276), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 41/134 (30%), Positives = 68/134 (50%), Gaps = 15/134 (11%)

Query: 1   MGALKNHFHDEINENFYFHSHPNA----DPDISIEMQISENQRYLDEEISQCNAVVDVFK 56
           MG LK ++ +EI  N+ F S  N     +P+ + E+++ E    L+  +     ++    
Sbjct: 1   MGQLKQYYLEEIEANYEFLSAVNPRMGIEPESNYEVEVIEK---LERALKTSKKLIHFRD 57

Query: 57  RSDSTILDKLDAMDDLKTYISLLQATAKNLKSLL---KEYW----EESLDGEDDEEIYEH 109
           R+  T + + D ++++   I L +A  + L+  +    E W    E   D E  E   EH
Sbjct: 58  RTIRTHILE-DLIEEVNRIIVLAKAHKRRLELKIFEDNEVWRLLDEAREDCEGCENCSEH 116

Query: 110 PDQEHREDYYANQI 123
           PDQEH+EDYYA+QI
Sbjct: 117 PDQEHKEDYYASQI 130


>gi|149923595|ref|ZP_01911994.1| hypothetical protein PPSIR1_00390 [Plesiocystis pacifica SIR-1]
 gi|149815564|gb|EDM75098.1| hypothetical protein PPSIR1_00390 [Plesiocystis pacifica SIR-1]
          Length = 450

 Score = 37.8 bits (86), Expect = 0.54,   Method: Composition-based stats.
 Identities = 14/52 (26%), Positives = 26/52 (50%), Gaps = 2/52 (3%)

Query: 51  VVDVFKRSDSTILDKLDAMDDLKTYISLLQATAKNLKSLLKEYWEESLDGED 102
           ++ V +RSD  +L  +      +  I  L A A+  ++ ++E WE   + ED
Sbjct: 72  LITVRERSD--LLRPVGDRTRYRRIIDALMALARRSEAFIRETWEWRPECED 121


>gi|9630051|ref|NP_046269.1| hypothetical protein OpmnVgp113 [Orgyia pseudotsugata MNPV]
 gi|1911359|gb|AAC59112.1| unknown [Orgyia pseudotsugata MNPV]
          Length = 361

 Score = 37.4 bits (85), Expect = 0.71,   Method: Composition-based stats.
 Identities = 25/91 (27%), Positives = 36/91 (39%), Gaps = 12/91 (13%)

Query: 37  NQRYLDEEISQCNAVVDVFKRSDSTILDKLDAMDD------------LKTYISLLQATAK 84
               L+E +     +V  F   DS ++  LDAM D            +K    +L  T  
Sbjct: 187 LISRLEEALHGECFIVWTFDELDSYVVQSLDAMRDKTITQFAEYTGFIKNTNRVLAFTMN 246

Query: 85  NLKSLLKEYWEESLDGEDDEEIYEHPDQEHR 115
           N + LL +YW +    E +   YEH D   R
Sbjct: 247 NAEMLLHDYWGDRERIEANFTHYEHVDDLRR 277


>gi|196008771|ref|XP_002114251.1| hypothetical protein TRIADDRAFT_57859 [Trichoplax adhaerens]
 gi|190583270|gb|EDV23341.1| hypothetical protein TRIADDRAFT_57859 [Trichoplax adhaerens]
          Length = 1173

 Score = 34.7 bits (78), Expect = 4.0,   Method: Composition-based stats.
 Identities = 23/115 (20%), Positives = 47/115 (40%), Gaps = 1/115 (0%)

Query: 7   HFHDEINENFYFHSHPNADPDISIEMQISENQRYLDEEISQCNAVVDVFKRSDSTILDKL 66
            + + + E F   S+ +       E  + E+ + L   + Q +    +   +DST + + 
Sbjct: 587 FYGESVEELFEQVSNGDEIEWPEEEDAVPEDAKDLITRLLQQDPATRLGTTTDSTEVKEH 646

Query: 67  DAMDDLKTYISLLQATAKNLKSLLKEYWEESLDGEDDEEIYEHPDQEHREDYYAN 121
           +   D+  + SLL+   + +  L  E      D   D     H D+E  E+Y ++
Sbjct: 647 ELFQDID-WASLLRQKVEFVPELDNEEDTSYFDPRTDRYCRTHSDEESDENYDSD 700


>gi|219130227|ref|XP_002185271.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217403186|gb|EEC43140.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 373

 Score = 34.7 bits (78), Expect = 4.3,   Method: Composition-based stats.
 Identities = 13/44 (29%), Positives = 26/44 (59%)

Query: 51  VVDVFKRSDSTILDKLDAMDDLKTYISLLQATAKNLKSLLKEYW 94
           V+ VF + D+  +++LD +D +  Y+ +      NL+ L++E W
Sbjct: 248 VLYVFNKIDAITIEELDILDQMPNYVPISSQHEWNLEELMEEIW 291


>gi|320170807|gb|EFW47706.1| hypoxia up-regulated protein [Capsaspora owczarzaki ATCC 30864]
          Length = 1035

 Score = 33.9 bits (76), Expect = 6.5,   Method: Composition-based stats.
 Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 3/63 (4%)

Query: 58  SDSTILDKLDAMDDLKTYISLLQATAKNLKSLLKEYWEESLDGEDDEEIYEHPDQEHRED 117
           S +TI  +LDA+ + +     L+A   +L+SL+   +  S   E+DEE+  H  QE R++
Sbjct: 750 SLTTITARLDAVRESERKRRQLEAAKNDLESLV---YSISARLEEDEELRAHTSQEQRDE 806

Query: 118 YYA 120
             A
Sbjct: 807 LLA 809


>gi|309775269|ref|ZP_07670278.1| sensor histidine kinase [Erysipelotrichaceae bacterium 3_1_53]
 gi|308916932|gb|EFP62663.1| sensor histidine kinase [Erysipelotrichaceae bacterium 3_1_53]
          Length = 570

 Score = 33.9 bits (76), Expect = 7.0,   Method: Composition-based stats.
 Identities = 16/98 (16%), Positives = 42/98 (42%), Gaps = 10/98 (10%)

Query: 8   FHDEINEN---FYFHSHPNADPDISIEMQISENQRYLDEEISQCNAVVDVFKRSDSTILD 64
           F  +I E+   +        + + S +  +++  R  +        V    K   ++++ 
Sbjct: 302 FQTDIEESLGMYEPLKSNLQNIEASFQDAVAQEVRSQNMRTELITNVSHDLKTPLTSMIS 361

Query: 65  KLDAM-------DDLKTYISLLQATAKNLKSLLKEYWE 95
            +D +       ++   YI++L+A +  LK L+++ +E
Sbjct: 362 YIDLLKNEELPQEERSRYIAILEAGSNRLKHLIEDLFE 399


>gi|168704774|ref|ZP_02737051.1| hypothetical protein GobsU_34877 [Gemmata obscuriglobus UQM 2246]
          Length = 737

 Score = 33.9 bits (76), Expect = 7.6,   Method: Composition-based stats.
 Identities = 24/108 (22%), Positives = 42/108 (38%), Gaps = 10/108 (9%)

Query: 14  ENFYFHSHPNADPDISIEMQISENQRYLDEEISQCNAVVDVFKRSDSTILDKLDAMDDLK 73
           E+F  H H + +P   +   ++   R L E    C  V    KR     +   D ++   
Sbjct: 207 ESFARHIHSSLNP-TEVAYHVANEGRKLIECDRLCVGVRHDRKRVTVEAVSGADVVEKAS 265

Query: 74  TYISLLQATAKNLKSLLKEY--WEESLDGEDDEEIYEHPDQEHREDYY 119
           T         + L+ L++    W E+L  + +++    PD  H  D Y
Sbjct: 266 T-------HVRRLRLLMQAVLQWGETLTFKGEKDPGLPPDVSHALDDY 306


  Database: nr
    Posted date:  May 5, 2011 12:50 PM
  Number of letters in database: 999,999,510
  Number of sequences in database:  2,987,262
  
  Database: /data/usr2/db/fasta/nr.01
    Posted date:  May 5, 2011 12:58 PM
  Number of letters in database: 999,999,740
  Number of sequences in database:  2,896,872
  
  Database: /data/usr2/db/fasta/nr.02
    Posted date:  May 5, 2011  1:04 PM
  Number of letters in database: 999,999,277
  Number of sequences in database:  2,907,728
  
  Database: /data/usr2/db/fasta/nr.03
    Posted date:  May 5, 2011  1:11 PM
  Number of letters in database: 999,999,899
  Number of sequences in database:  2,932,281
  
  Database: /data/usr2/db/fasta/nr.04
    Posted date:  May 5, 2011  1:15 PM
  Number of letters in database: 750,261,346
  Number of sequences in database:  2,116,963
  
Lambda     K      H
   0.311    0.129    0.335 

Lambda     K      H
   0.267   0.0394    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,995,655,753
Number of Sequences: 13841106
Number of extensions: 62390304
Number of successful extensions: 242846
Number of sequences better than 10.0: 135
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 236
Number of HSP's that attempted gapping in prelim test: 242602
Number of HSP's gapped (non-prelim): 429
length of query: 123
length of database: 4,750,259,772
effective HSP length: 89
effective length of query: 34
effective length of database: 3,518,401,338
effective search space: 119625645492
effective search space used: 119625645492
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 75 (33.6 bits)