HHsearch alignment for GI: 254780124 and conserved domain: PHA00619
>PHA00619 CRISPR-associated Cas4-like protein.
Probab=98.42 E-value=1.9e-05 Score=55.25 Aligned_cols=162 Identities=17% Similarity=0.075 Sum_probs=83.0
Q ss_pred HHHCCCHHHHHHC-CCCCCCC-HHH---HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 7871832388621-3899989-889---9989999999999724576534322010456453775788999999999998
Q gi|254780124|r 14 RWLKCPIAPTLES-KIPQTTS-IYA---SEGTFAHNLLAHCLEQGVDAETVSHQKLTFENDTRIVDTEMASSVSMVLAYV 88 (388)
Q Consensus 14 rwl~CP~s~~Le~-~~pd~~S-~aA---~~GT~~H~llE~~l~~~l~~~~~~~~~~~~~~~~~~~~~e~~~~v~~~~~~~ 88 (388)
T Consensus 36 els~ClRrs~l~~k~g~~k~~~~~~~rm~iG~~lH~~L~~iL~~~-gfE~------------------------------ 84 (210)
T PHA00619 36 ELSRCLRRSWLMRKKGGVKLALEEAMKMHIGSGLHMRLQDILKKH-GFET------------------------------ 84 (210)
T ss_pred HHHHCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC-CCEE------------------------------
T ss_conf 644466799999865884741667766556388999999999857-9625------------------------------
Q ss_pred HCCCCCCEEEEEEEEEEECCCEEEEEEEEEEEEECCEEEEEEEECCCCC---CCC-CCCCHHHHHHHHHHHHHCCCCCCC
Q ss_conf 5037873688775532000440589999999985997999981136887---674-466879999999999843835676
Q gi|254780124|r 89 RTFSGPFLSETEVPLEPFTTEPGATGTADILIFNSTQWIIVDFKYGAGV---PVK-AENNTQLMLYACGALHQYGDIFGR 164 (388)
Q Consensus 89 r~~~~~~~ve~E~~~~~~~~~~~~~GtiD~I~~~dg~l~IiDyKtGk~~---~v~-a~~n~QL~lYALgA~~~~~~~~~~ 164 (388)
T Consensus 85 -------E~~Ver~~~---lGf~I~GRiDay~~--e~~~v~eiK~t~~~~l~~~~~~~hl~QLN~Yl~m~~a~~GyLy-- 150 (210)
T PHA00619 85 -------ECRVERKTA---LGFEIVGRIDVYDK--EENTIYELKYTHMQDLDKGRLNNYLRQLNYYIEMANAMAGYLI-- 150 (210)
T ss_pred -------EEEEEEEEC---CCEEEEEEEEEECC--CCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEE--
T ss_conf -------788998603---56599978874237--7775999985366667778707499999999999874257699--
Q ss_pred CCEEEEEEEEEECCCCCCCCCCCCCHHHHHHHHH-HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 5138999998304887754302589889999999-9999999998577653047766788866667257644562
Q gi|254780124|r 165 PEALTLTIIQPRVRTGSPINEWVISADDLLEKAK-EFKERGTLALSLKSKRAVSLEHYGVNDDSCRFCRAKVRCP 238 (388)
Q Consensus 165 ~~~v~~~I~qpr~~~~~~vs~~~~s~eeL~~~~~-~v~~~a~~~~~~~a~~~~~~~~~~~~g~~CrfC~~k~~Cr 238 (388)
T Consensus 151 -------~V~-~dgr~eeik---------~~~~~t~l~~r~~af~i~~~E~~lpp-~K~~p~~~C~~CP~~~~Cw 207 (210)
T PHA00619 151 -------IVH-ADGRVEEIK---------RDWKETDLENRANAFGISVEENILPP-KKSKPDRECIECPFYNVCW 207 (210)
T ss_pred -------EEE-CCCCHHHHH---------HHHHHHHHHHHHHHHCCCCHHCCCCC-CCCCCCCCEEECCCEEEEE
T ss_conf -------998-489847776---------66443026665444002320202799-9899996102477101664