HHsearch results for GI: 254780124 and protein with PDBid: 1w36_C

>1w36_C RECC, exodeoxyribonuclease V gamma chain; recombination, helicase, hydrolase, DNA repair; HET: DNA; 3.1A {Escherichia coli} SCOP: c.37.1.19 c.37.1.19 c.52.1.25 PDB: 3k70_C*
Probab=97.04  E-value=0.0091  Score=36.22  Aligned_cols=141  Identities=11%  Similarity=0.009  Sum_probs=78.6

Q ss_pred             CCCCCCHHHHHCCCHHHHHHCCC----CCC-----C-----CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC----CCCC
Q ss_conf             61842367787183238862138----999-----8-----9889998999999999972457653432201----0456
Q gi|254780124|r    6 FLSASSSHRWLKCPIAPTLESKI----PQT-----T-----SIYASEGTFAHNLLAHCLEQGVDAETVSHQK----LTFE   67 (388)
Q Consensus         6 ~LSpSs~~rwl~CP~s~~Le~~~----pd~-----~-----S~aA~~GT~~H~llE~~l~~~l~~~~~~~~~----~~~~   67 (388)
                      .+|+|...+|..||..++|+...    ++.     .     -.....+++.|.+++..+...-... .....    ....
T Consensus       831 ~ls~s~L~~f~~~P~~~fl~~~L~~~~~~~~~~~~d~Ep~~ld~L~~~~l~~~ll~~~l~~~~~~~-~~~~~~~~g~LP~  909 (1122)
T 1w36_C          831 TVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAER-LFRRFRAAGDLPY  909 (1122)
T ss_dssp             CEEHHHHHHHSSSHHHHHHHTTTCCCCCCSCCCCCSSCCSSCCHHHHHHHHHHHHHHHHTTCCHHH-HHHHHHHHTCSCS
T ss_pred             CCCHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHH-HHHHHHHCCCCCC
T ss_conf             448999999997968999997448888621224555686667706552499999999871899999-9999997599998


Q ss_pred             CC-CHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEECCCEEEEEEEEEEEEECCEEEEEEEECCCCCCCCCCCCHH
Q ss_conf             45-37757889999999999985037873688775532000440589999999985997999981136887674466879
Q gi|254780124|r   68 ND-TRIVDTEMASSVSMVLAYVRTFSGPFLSETEVPLEPFTTEPGATGTADILIFNSTQWIIVDFKYGAGVPVKAENNTQ  146 (388)
Q Consensus        68 ~~-~~~~~~e~~~~v~~~~~~~r~~~~~~~ve~E~~~~~~~~~~~~~GtiD~I~~~dg~l~IiDyKtGk~~~v~a~~n~Q  146 (388)
                      .. .....+.....++.+.+.+.......   .++.++...++..+.|++|.|.-  ++  ++.+++|+-   .+.+-.+
T Consensus       910 g~~g~~~~~~~~~~~~~l~~~~~~~~~~~---~~~~~~l~~~~~~L~G~l~~v~~--~~--~v~~~~~~~---~~~~~l~  979 (1122)
T 1w36_C          910 GAFGEIFWETQCQEMQQLADRVIACRQPG---QSMEIDLACNGVQITGWLPQVQP--DG--LLRWRPSLL---SVAQGMQ  979 (1122)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTTCCCC---EEEEEEEEETTEEEEEEEEEECS--SE--EEEECSSCC---CHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHCCCC---CCEEEEEEECCEEEEEEECCCCC--CC--EEEEEECCC---CHHHHHH
T ss_conf             25569999999999999999998706888---86348984098899998898626--83--599972789---8788999


Q ss_pred             HHHHHHHHHHH
Q ss_conf             99999999984
Q gi|254780124|r  147 LMLYACGALHQ  157 (388)
Q Consensus       147 L~lYALgA~~~  157 (388)
                      +-+.-|.+...
T Consensus       980 ~wl~hL~~~a~  990 (1122)
T 1w36_C          980 LWLEHLVYCAS  990 (1122)
T ss_dssp             HHHHHHHHHHT
T ss_pred             HHHHHHHHHHC
T ss_conf             99999999826