HHsearch results for GI: 254780124 and protein with PDBid: 3l0a_A
>3l0a_A Putative exonuclease; RER070207002219, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: PE4; 2.19A {Eubacterium rectale}
Probab=99.71 E-value=7.3e-16 Score=122.30 Aligned_cols=211 Identities=17% Similarity=0.138 Sum_probs=117.5
Q ss_pred CCCCCCHHHHHCCCHHH--------HHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCC--CCCCCCCCCCCCCCCCHHHHH
Q ss_conf 61842367787183238--------86213899989889998999999999972457--653432201045645377578
Q gi|254780124|r 6 FLSASSSHRWLKCPIAP--------TLESKIPQTTSIYASEGTFAHNLLAHCLEQGV--DAETVSHQKLTFENDTRIVDT 75 (388)
Q Consensus 6 ~LSpSs~~rwl~CP~s~--------~Le~~~pd~~S~aA~~GT~~H~llE~~l~~~l--~~~~~~~~~~~~~~~~~~~~~ 75 (388)
.||.|++.+|+.||... ++....+.++++++..||++|.++|..++... ..+.. ........+ ...-.
T Consensus 18 y~S~S~ik~~~~~~~~~~~~a~~~a~~~~~~~~~~t~al~~Gt~vH~~le~~~~~~~~~~~~~~-~~~~~~~~e-~~~~~ 95 (266)
T 3l0a_A 18 YMSVSGYKDFAGTYGKMPCEFYGMEKLNGRWEDEKSTALLVGSYVDSYFEGSLDQFKKDNPEIF-TQKGELKAN-FKQAE 95 (266)
T ss_dssp CEEHHHHHHHHCBTTBCCCHHHHHHHHHTSCCCCCCHHHHHHHHHHHHHHTCHHHHHHHCGGGB-CTTSSBCHH-HHHHH
T ss_pred EECHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHCCCCCC-CCCCHHHHH-HHHHH
T ss_conf 1269899998439311002688999860777889987998718999986574553420184201-333144899-99999
Q ss_pred HHHHHHHHHHHHHHCCCCCCEEEEEEEEEEECCCEEEEEEEEEEEEECCEEEEEEEECCCCCCCCC--------------
Q ss_conf 899999999999850378736887755320004405899999999859979999811368876744--------------
Q gi|254780124|r 76 EMASSVSMVLAYVRTFSGPFLSETEVPLEPFTTEPGATGTADILIFNSTQWIIVDFKYGAGVPVKA-------------- 141 (388)
Q Consensus 76 e~~~~v~~~~~~~r~~~~~~~ve~E~~~~~~~~~~~~~GtiD~I~~~dg~l~IiDyKtGk~~~v~a-------------- 141 (388)
.|.+.+...- ..... ...+.|+.+...+.+..+.|++|++..+ + .|+|+||.+......
T Consensus 96 ~m~~~~~~~~-~~~~~---~~~~~E~~~~~~~~gv~~kg~iD~i~~~-~--~ivDlKtt~~~~~~~~~~~~~~~~~~~~~ 168 (266)
T 3l0a_A 96 EIIARIERDE-YFMKY---MSGQKQVIMTGELFGAKWKIKMDSYIPG-V--AIVDLKVMASITDLKWVKDIGYLDFVRYW 168 (266)
T ss_dssp HHHHHHHTCH-HHHHH---TTSEEEEEEEEEETTEEEEEEEEEEETT-T--EEEEEEEESCSSCCEEETTTEEECHHHHT
T ss_pred HHHHHHHHCC-HHHHH---CCCCCEEEEEEEECCEEEEEEEEEEECC-C--CEEEEEEEECCCCCCCCCCCCHHHHHHHC
T ss_conf 9999999670-03555---1577247899977585874067899568-9--72676774115632244321035577752
Q ss_pred CCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 66879999999999843835676513899999830488775430258988999999999999999985776530477667
Q gi|254780124|r 142 ENNTQLMLYACGALHQYGDIFGRPEALTLTIIQPRVRTGSPINEWVISADDLLEKAKEFKERGTLALSLKSKRAVSLEHY 221 (388)
Q Consensus 142 ~~n~QL~lYALgA~~~~~~~~~~~~~v~~~I~qpr~~~~~~vs~~~~s~eeL~~~~~~v~~~a~~~~~~~a~~~~~~~~~ 221 (388)
....||.+|+.+..+.++... . ..++..-......+..+.++.+.+..-.+.+...+..+.... .++..
T Consensus 169 ~Y~~Q~a~Y~~~l~~~~g~~~---~---~~~v~v~k~~p~~~~~~~~~~~~l~~~~~~v~~~i~~i~~~~-----~~~~~ 237 (266)
T 3l0a_A 169 GYDIQGAVYQEIVRQNTGEKL---P---FFIAGATKQTEPDIRIIHVTDNYLQEALHMVEMNMPRILRVK-----NGEVE 237 (266)
T ss_dssp THHHHHHHHHHHHHHHHSCCC---C---EEEEEEECSSSCCEEEEEECHHHHHHHHHHHHHHHHHHHHHH-----TTSSC
T ss_pred CHHHHHHHHHHHHHHHHCCCC---C---EEEEEEECCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHH-----CCCCC
T ss_conf 889999999999999868986---3---799999788887604897798999999999999999999997-----28968
Q ss_pred CCCCCCCCCCCCCCCCCHHHH
Q ss_conf 888666672576445620134
Q gi|254780124|r 222 GVNDDSCRFCRAKVRCPALSR 242 (388)
Q Consensus 222 ~~~g~~CrfC~~k~~Cra~a~ 242 (388)
+ ++|.+|+| ||..-+
T Consensus 238 p---~~C~~CdY---Cr~~k~ 252 (266)
T 3l0a_A 238 P---DRCELCDC---CRHNRV 252 (266)
T ss_dssp C---CCCSCSHH---HHHHCC
T ss_pred C---CCCCCCCC---CHHHHH
T ss_conf 9---98998987---720300