HHsearch alignment of GI: 254780125 and MMDB domain: 2qq9_A_1-146

>2qq9_A (A:1-146) Diphtheria toxin repressor; regulator, DTXR, helix-turn-helix, metal ION, activation, DNA-binding, ferrous iron, cytoplasm; 1.71A {Corynebacterium diphtheriae} PDB: 2tdx_A 1ddn_A 1g3t_A 1g3s_A 1g3w_A 2qqa_A 2qqb_A 2dtr_A 1bi0_A 1bi2_A 1bi3_A 1dpr_A 1bi1_A 1fwz_A 1g3y_A 1c0w_A* 3glx_A 1p92_A 1xcv_A 1f5t_A ...
Probab=94.29  E-value=0.13  Score=30.21  Aligned_cols=56  Identities=18%  Similarity=0.187  Sum_probs=45.6

Q ss_pred             HCCCCCCCHHHHHHHHCCCC-CHHHHHHHHHHCCCEEECCCCCEEECHHHHHHHHHH
Q ss_conf             15587323999999738998-889999999978976853799443657897543553
Q gi|254780125|r  171 SDNDEYLTITQIGERLNPPQ-RARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKM  226 (262)
Q Consensus       171 ~~~~~~l~~t~iak~l~~~~-sa~~~N~lL~~~g~q~Rk~~~~W~lt~kg~~~g~~~  226 (262)
                      ....+.++.++||+.+|++. +....-+.|.+.|+..|...+.+.+|++|.......
T Consensus        19 ~~~~~~v~~~elA~~l~vs~~svt~~i~rLe~~GlI~~~~~~~i~lT~~G~~~~~~~   75 (146)
T 2qq9_A           19 EEEGVTPLRARIAERLEQSGPTVSQTVARMERDGLVVVASDRSLQMTPTGRTLATAV   75 (146)
T ss_dssp             HHHTCCCBHHHHHHHHTCCHHHHHHHHHHHHHTTSEEECTTSBEEECHHHHHHHHHH
T ss_pred             HHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCEEEECHHHHHHHHHH
T ss_conf             865997619999999789927999999999977995205874477417689999999