BLAST/PSIBLAST alignment of GI: 254780125 and GI: 28198899 at iteration 1
>gi|28198899|ref|NP_779213.1| hypothetical protein PD1001 [Xylella fastidiosa Temecula1] Length = 262
>gi|182681602|ref|YP_001829762.1| prophage antirepressor [Xylella fastidiosa M23] Length = 262
>gi|28056997|gb|AAO28862.1| phage-related protein [Xylella fastidiosa Temecula1] Length = 262
>gi|182631712|gb|ACB92488.1| prophage antirepressor [Xylella fastidiosa M23] Length = 262
>gi|307580036|gb|ADN64005.1| prophage antirepressor [Xylella fastidiosa subsp. fastidiosa GB514] Length = 262
 Score =  179 bits (453), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 105/257 (40%), Positives = 148/257 (57%), Gaps = 16/257 (6%)

Query: 1   MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
           M+ +TPF+FES+ +RT+VD    +WFV  DVAT LGY N ++A++AHCKG AKR PL+T 
Sbjct: 12  MNAMTPFQFESHAVRTVVDDHGEVWFVGTDVATVLGYANPHKALDAHCKGCAKRTPLQTP 71

Query: 61  GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEA--PKLRATS 118
           GGIQ++RIISEPD+ RL+V S LP+A++FERWVFEEVLPTLRKTG+YS     P L   +
Sbjct: 72  GGIQEIRIISEPDMLRLIVSSKLPAAERFERWVFEEVLPTLRKTGTYSTPGALPTLPGPT 131

Query: 119 ASTVLRVHKHLEELAKQAGLKDN---QLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDE 175
              V  +    + ++K  G+K        L   +  T +T  +   A+     P      
Sbjct: 132 QDRVAALLLIGQFVSKVTGVKPGIAAAATLACIKSNTNLTTEEIRRALPALQEPLC---- 187

Query: 176 YLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCD-VPMQHV 234
            L  TQ+G+RL+    A+ +N+LL  RG Q       +  T    E G   C+ +P    
Sbjct: 188 LLNATQLGKRLH--CSAKAVNQLLASRGFQFRNERDEWELT----EAGRVWCEAIPYSRN 241

Query: 235 EGSTQQLKWNSNLLVSF 251
             S+ QL WN +++   
Sbjct: 242 GHSSYQLLWNPDVIACL 258