BLAST/PSIBLAST alignment of GI: 254780125 and GI: 28198899 at iteration 1
>gi|28198899|ref|NP_779213.1| hypothetical protein PD1001 [Xylella fastidiosa Temecula1] Length = 262
>gi|182681602|ref|YP_001829762.1| prophage antirepressor [Xylella fastidiosa M23] Length = 262
>gi|28056997|gb|AAO28862.1| phage-related protein [Xylella fastidiosa Temecula1] Length = 262
>gi|182631712|gb|ACB92488.1| prophage antirepressor [Xylella fastidiosa M23] Length = 262
>gi|307580036|gb|ADN64005.1| prophage antirepressor [Xylella fastidiosa subsp. fastidiosa GB514] Length = 262
Score = 179 bits (453), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 105/257 (40%), Positives = 148/257 (57%), Gaps = 16/257 (6%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
M+ +TPF+FES+ +RT+VD +WFV DVAT LGY N ++A++AHCKG AKR PL+T
Sbjct: 12 MNAMTPFQFESHAVRTVVDDHGEVWFVGTDVATVLGYANPHKALDAHCKGCAKRTPLQTP 71
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEA--PKLRATS 118
GGIQ++RIISEPD+ RL+V S LP+A++FERWVFEEVLPTLRKTG+YS P L +
Sbjct: 72 GGIQEIRIISEPDMLRLIVSSKLPAAERFERWVFEEVLPTLRKTGTYSTPGALPTLPGPT 131
Query: 119 ASTVLRVHKHLEELAKQAGLKDN---QLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDE 175
V + + ++K G+K L + T +T + A+ P
Sbjct: 132 QDRVAALLLIGQFVSKVTGVKPGIAAAATLACIKSNTNLTTEEIRRALPALQEPLC---- 187
Query: 176 YLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCD-VPMQHV 234
L TQ+G+RL+ A+ +N+LL RG Q + T E G C+ +P
Sbjct: 188 LLNATQLGKRLH--CSAKAVNQLLASRGFQFRNERDEWELT----EAGRVWCEAIPYSRN 241
Query: 235 EGSTQQLKWNSNLLVSF 251
S+ QL WN +++
Sbjct: 242 GHSSYQLLWNPDVIACL 258