HHsearch alignment for GI: 254780127 and conserved domain: KOG2249
>KOG2249 consensus.
Probab=94.94 E-value=0.26 Score=26.86 Aligned_cols=83 Identities=24% Similarity=0.241 Sum_probs=49.8
Q ss_pred HHHHHHHHCCCCCEEEEEEHHHHHHHHHHHCCCCCCCCCEEEHH----HHHH-HHCCCCCHHHHHHH-HCCCCCCHHHHH
Q ss_conf 79999986488981998630775999998629987865045458----8999-85889997899998-088986527663
Q gi|254780127|r 54 PSDLLQYLRDETVMCVAHNSLFERILFKKTLGIDIPSKRWICTS----VLAR-TNGLPSSLKNACLA-LNFSEHLTKMEE 127 (675)
Q Consensus 54 ~~~l~~~L~~~~~~kv~HNa~FD~~vL~~~lGi~i~~~~~~DTm----i~A~-~l~~p~sL~~la~~-lgl~~~~~kd~~ 127 (675)
T Consensus 175 Q~ev~klL~--gRIlVGHaLhnDl~~L~l----~hp~s~iRDTs~~~pl~k~~~~~~tpSLK~Lt~~~Lg~~IQ~Ge--- 245 (280)
T KOG2249 175 QKEVLKLLK--GRILVGHALHNDLQALKL----EHPRSMIRDTSKYPPLMKLLSKKATPSLKKLTEALLGKDIQVGE--- 245 (280)
T ss_pred HHHHHHHHH--CCEEECCCCCCHHHHHHH----HCCHHHHCCCCCCCHHHHHHHCCCCCCHHHHHHHHHCHHHHCCC---
T ss_conf 999999970--877751220007999855----37435531431275487775215983199999998452543156---
Q ss_pred CHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 765766410023320134531125876899989887753999999998720
Q gi|254780127|r 128 GKALIARFCKGSIDSPPYDCTRANHVQAWQLFGEYCKRDVEATRELFKRLI 178 (675)
Q Consensus 128 gk~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ya~~Dv~~~~~L~~~L~ 178 (675)
T Consensus 246 ---------------------------------HsSvEDA~AtM~LY~~vk 263 (280)
T KOG2249 246 ---------------------------------HSSVEDARATMELYKRVK 263 (280)
T ss_pred ---------------------------------CCCHHHHHHHHHHHHHHH
T ss_conf ---------------------------------685889999999999999