HHsearch alignment for GI: 254780127 and conserved domain: PRK05711

>PRK05711 DNA polymerase III subunit epsilon; Provisional.
Probab=99.18  E-value=1.6e-09  Score=81.21  Aligned_cols=63  Identities=25%  Similarity=0.405  Sum_probs=46.3

Q ss_pred             HHHHHHCCCCCEEEEEEHHHHHHHHHHH---CCCCCCC----CCEEEHHHHHHHH--CCCCCHHHHHHHHCCCC
Q ss_conf             9999864889819986307759999986---2998786----5045458899985--88999789999808898
Q gi|254780127|r   56 DLLQYLRDETVMCVAHNSLFERILFKKT---LGIDIPS----KRWICTSVLARTN--GLPSSLKNACLALNFSE  120 (675)
Q Consensus        56 ~l~~~L~~~~~~kv~HNa~FD~~vL~~~---lGi~i~~----~~~~DTmi~A~~l--~~p~sL~~la~~lgl~~  120 (675)
T Consensus        79 efl~Fi--~~s~lVaHNa~FD~~FLn~El~r~g~~~~~~~~~~~viDTL~lAR~~~Pg~~~sLdaLc~r~~I~~  150 (240)
T PRK05711         79 EFLDFI--RGAELIIHNAPFDIGFMDYEFALLGRDIPKTTTFCKVTDTLAMARRMFPGKRNSLDALCKRYGIDN  150 (240)
T ss_pred             HHHHHH--CCCEEEEECCHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHCCCCC
T ss_conf             999981--899799966199899999999986899876445212101999999878999889999999809898