HHsearch alignment for GI: 254780127 and conserved domain: PRK05711
>PRK05711 DNA polymerase III subunit epsilon; Provisional.
Probab=99.18 E-value=1.6e-09 Score=81.21 Aligned_cols=63 Identities=25% Similarity=0.405 Sum_probs=46.3
Q ss_pred HHHHHHCCCCCEEEEEEHHHHHHHHHHH---CCCCCCC----CCEEEHHHHHHHH--CCCCCHHHHHHHHCCCC
Q ss_conf 9999864889819986307759999986---2998786----5045458899985--88999789999808898
Q gi|254780127|r 56 DLLQYLRDETVMCVAHNSLFERILFKKT---LGIDIPS----KRWICTSVLARTN--GLPSSLKNACLALNFSE 120 (675)
Q Consensus 56 ~l~~~L~~~~~~kv~HNa~FD~~vL~~~---lGi~i~~----~~~~DTmi~A~~l--~~p~sL~~la~~lgl~~ 120 (675)
T Consensus 79 efl~Fi--~~s~lVaHNa~FD~~FLn~El~r~g~~~~~~~~~~~viDTL~lAR~~~Pg~~~sLdaLc~r~~I~~ 150 (240)
T PRK05711 79 EFLDFI--RGAELIIHNAPFDIGFMDYEFALLGRDIPKTTTFCKVTDTLAMARRMFPGKRNSLDALCKRYGIDN 150 (240)
T ss_pred HHHHHH--CCCEEEEECCHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHCCCCC
T ss_conf 999981--899799966199899999999986899876445212101999999878999889999999809898