HHsearch alignment for GI: 254780127 and conserved domain: PRK08517

Probab=99.08  E-value=4.5e-09  Score=78.17  Aligned_cols=87  Identities=22%  Similarity=0.248  Sum_probs=61.8

Q ss_pred             HHHHHHCCCCCEEEEEEHHHHHHHHHHH---CCCCCCCCCEEEHHHHHHHH--CCCCCHHHHHHHHCCCCCCHHHHHCHH
Q ss_conf             9999864889819986307759999986---29987865045458899985--889997899998088986527663765
Q gi|254780127|r   56 DLLQYLRDETVMCVAHNSLFERILFKKT---LGIDIPSKRWICTSVLARTN--GLPSSLKNACLALNFSEHLTKMEEGKA  130 (675)
Q Consensus        56 ~l~~~L~~~~~~kv~HNa~FD~~vL~~~---lGi~i~~~~~~DTmi~A~~l--~~p~sL~~la~~lgl~~~~~kd~~gk~  130 (675)
T Consensus       142 ~f~~Fi~--d~ilVaHNa~FD~~FL~~~l~r~g~~~l~n~~lDTl~LAR~~~p~~~ykL~~La~~~~I~~~~--------  211 (259)
T PRK08517        142 DFRLFLG--DSVFVAHNVNFDYNFISRSLEEIGLGPLLNRKLCTIDLAKRTIESPRYGLSFLKELLGIETEV--------  211 (259)
T ss_pred             HHHHHHC--CCEEEEECCHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHCCCCCCCHHHHHHHCCCCCCC--------
T ss_conf             9999968--895999372760999999999839997689856608999987587787889999975989999--------


Q ss_pred             HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
Q ss_conf             766410023320134531125876899989887753999999998720021
Q gi|254780127|r  131 LIARFCKGSIDSPPYDCTRANHVQAWQLFGEYCKRDVEATRELFKRLIPLS  181 (675)
Q Consensus       131 li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ya~~Dv~~~~~L~~~L~~~~  181 (675)
T Consensus       212 -----------------------------~HRAl~DA~aTaevF~~~L~~l  233 (259)
T PRK08517        212 -----------------------------HHRAYADALAAYEIFEICLLNL  233 (259)
T ss_pred             -----------------------------CCCCHHHHHHHHHHHHHHHHHC
T ss_conf             -----------------------------9784588999999999999856