HHsearch alignment for GI: 254780127 and conserved domain: pfam10108

>pfam10108 Exon_PolB Predicted 3'-5' exonuclease related to the exonuclease domain of PolB. This domain is found in various prokaryotic 3'-5' exonucleases and hypothetical proteins.
Probab=97.76  E-value=0.0024  Score=40.26  Aligned_cols=131  Identities=18%  Similarity=0.271  Sum_probs=77.7

Q ss_pred             EEEEEEEE--ECCCEEEEEECCCCC----HHHHHHHHHHCCCCCEEEEEEH-HHHHHHHHH---HCCCCCCC--------
Q ss_conf             29999999--838228999788842----2179999986488981998630-775999998---62998786--------
Q gi|254780127|r   29 VITLCAYA--WDDEPVKLWDRTEQS----AMPSDLLQYLRDETVMCVAHNS-LFERILFKK---TLGIDIPS--------   90 (675)
Q Consensus        29 ~I~~i~~a--~~~~~~~~~d~~~~~----~~~~~l~~~L~~~~~~kv~HNa-~FD~~vL~~---~lGi~i~~--------   90 (675)
T Consensus        10 riVaIs~v~~~~~~~~~v~slg~~~~~E~~ll~~F~~~i~~~~P~LVs~NG~gFDlPvL~~RAl~~gi~ap~~~~~~~~~   89 (211)
T pfam10108        10 RIVAISAVIADDDGGFKVWSLGDPESSEKELIQRFFDGIEKYTPQLVSFNGRGFDLPVLHYRALKHGVSAPRYFDTGDRD   89 (211)
T ss_pred             EEEEEEEEEEECCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHCCCCC
T ss_conf             16999999996699279987889998999999999999984398288656865548999999998188850787567876


Q ss_pred             CCE-----------EEHHHHHHHHC--CCCCHHHHHHHHCCCCCCHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCHHHHH
Q ss_conf             504-----------54588999858--89997899998088986527663765766410023320134531125876899
Q gi|254780127|r   91 KRW-----------ICTSVLARTNG--LPSSLKNACLALNFSEHLTKMEEGKALIARFCKGSIDSPPYDCTRANHVQAWQ  157 (675)
Q Consensus        91 ~~~-----------~DTmi~A~~l~--~p~sL~~la~~lgl~~~~~kd~~gk~li~~~~~~~~~~~~~~~~~~~~~~~~~  157 (675)
T Consensus        90 ~kw~nY~~Ry~~~H~DLmd~l~~~g~~~~~~Ld~~a~l~G~PGK~--~~~G~~V~~~--------------~~--~G~l~  151 (211)
T pfam10108        90 FKWNNYFNRYSTRHLDLMDLLSGYGARANAPLDEVAALLGLPGKM--GVDGSQVWEL--------------YQ--AGKIE  151 (211)
T ss_pred             CCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHCCCCCCC--CCCHHHHHHH--------------HH--CCCHH
T ss_conf             654441123565445489998732886778989999981999878--7764589999--------------98--59888


Q ss_pred             HHHHHHHHHHHHHHHHHHHH
Q ss_conf             98988775399999999872
Q gi|254780127|r  158 LFGEYCKRDVEATRELFKRL  177 (675)
Q Consensus       158 ~~~~Ya~~Dv~~~~~L~~~L  177 (675)
T Consensus       152 ~I~~YCe~DvlnTylv~LR~  171 (211)
T pfam10108       152 EIRDYCETDVLNTYLVYLRF  171 (211)
T ss_pred             HHHHHHHHHHHHHHHHHHHH
T ss_conf             99999887689999999999