PSIBLAST alignment of GI: 254780127 and protein with PDB id: 1d8y

>gi|6730276|pdb|1D8Y|A Chain A, Crystal Structure Of The Complex Of Dna Polymerase I Klenow Fragment With Dna Length = 605
 Score =  402 bits (1032), Expect = e-109,   Method: Composition-based stats.
 Identities = 104/701 (14%), Positives = 193/701 (27%), Gaps = 171/701 (24%)

Query: 10  TRSPQPLPKVGVWAYAEQAVITLCAYAWDDEPVKLWDRTEQ----------SAMPSDLLQ 59
           T S   +           A +   ++A +                            L  
Sbjct: 35  TDSLDNI----------SANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKP 84

Query: 60  YLRDETVMCVAHNSLFERILFKKTLGIDIPSKRWICTSVLARTNGL---PSSLKNACLA- 115
            L DE  + V  N  ++R +     GI++    +  T + +           + +     
Sbjct: 85  LLEDEKALKVGQNLKYDRGILANY-GIELRGIAF-DTMLESYILNSVAGRHDMDSLAERW 142

Query: 116 LNFSEHLTKMEEGKALIARFCKGSIDSPPYDCTRANHVQAWQLFGEYCKRDVEATRELFK 175
           L       +   GK                      +  A +  G Y   D + T +L  
Sbjct: 143 LKHKTITFEEIAGKGKNQL---------------TFNQIALEEAGRYAAEDADVTLQLHL 187

Query: 176 RLIPLSDG-----------ERDLWLLDQTINDRGYRIDLDLVLKLQELIAQERKKLDEDI 224
           ++ P               E  L  +   I   G +ID  ++    E +     +L++  
Sbjct: 188 KMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKA 247

Query: 225 VKLTDGIIRSSRQTYALRMYLFLITGIDLVDMSE----GTLKSILSHSNITQLAKDLILN 280
            ++      +   T  L+  LF   GI  +  +      T + +L    +      +IL 
Sbjct: 248 HEIAGEEF-NLSSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILE 306

Query: 281 RLASSGSAILKLNTLSEAVSS-DGRLRGTLQFYGASRTGRWSGCVFQPQNLPRQERSEEI 339
               +       + L   ++   GR+  +      + TGR S      QN+P        
Sbjct: 307 YRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAV-TATGRLSSTDPNLQNIP-------- 357

Query: 340 LTQTIQALNRGETIADPLGLASDCVRSCIIASNGKKLVVADLAGIEARVLAWIAGEDWKI 399
                                   +R   IA     +V AD + IE R++A ++ +   +
Sbjct: 358 ----------------VRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLL 401

Query: 400 KAFANGEDIYVTTYAKAFNTPIDKVSKEQRAIGKVMELALGYQGGAKVFKTMASHCGLDL 459
            AFA G+DI+  T A+ F  P++ V+ EQR   K +                    G+  
Sbjct: 402 TAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINF--------------GLIYGMS- 446

Query: 460 QQFSQNVKSTSTFEDWEQAESHHLWMQDQYPEFAVKDKLIGTACELVKKAWRAKHQGVLQ 519
                                            A +  +     +     +  ++ GVL+
Sbjct: 447 -----------------------------AFGLARQLNIPRKEAQKYMDLYFERYPGVLE 477

Query: 520 LWKDLTEGFACVVQEGGSISARRVANVPRLVMRRHKRDVHIVLPSSRRLVYSDVKGDCSY 579
             +                                     +     RRL   D+K     
Sbjct: 478 YMERTRAQAKEQGY--------------------------VETLDGRRLYLPDIKSSNGA 511

Query: 580 LNTATSQLMRERTYGGKLTENIVQAISRDILCEGMKNATK------NGYDIVLTVHDEIV 633
              A  +               +Q  + DI+   M               +++ VHDE+V
Sbjct: 512 RRAAAERAA---------INAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELV 562

Query: 634 SETPDTPYFSV-GTLCSLMTKNPSWAKGLPLKAEGYEAKRY 673
            E       +V   +  LM         +PL  E    + +
Sbjct: 563 FEVHKDDVDAVAKQIHQLMENCTR--LDVPLLVEVGSGENW 601