PSIBLAST alignment of GI: 254780127 and protein with PDB id: 2ktq
>gi|6730021|pdb|2KTQ|A Chain A, Open Ternary Complex Of The Large Fragment Of Dna Polymerase I From Thermus Aquaticus Length = 538
Score = 267 bits (683), Expect = 4e-69, Method: Composition-based stats.
Identities = 84/606 (13%), Positives = 156/606 (25%), Gaps = 141/606 (23%)
Query: 76 ERILFKKTLGIDIPSKRWICTSVLARTNGLPSSL-KNACLALNFSEHLTKMEEGKALIAR 134
+ + G+ +P +LA ++ +
Sbjct: 61 DLSVLALREGLGLPPG--DDPMLLAYLLDPSNTTPEGVARRYG----------------- 101
Query: 135 FCKGSIDSPPYDCTRANHVQAWQLFGEYCKRDVEATRELFKRLIPLSDGERDLWLLDQTI 194
+ T +A + E + L + ER L + +
Sbjct: 102 ----------GEWTEEAGERAALSERLFANLWGRLEGE-ERLLWLYREVERPLSAVLAHM 150
Query: 195 NDRGYRIDLDLVLKLQELIAQERKKLDEDIVKLTDGIIRSSRQTYALRMYLFLITGID-- 252
G R+D+ + L +A+E +L+ ++ +L + L LF G+
Sbjct: 151 EATGVRLDVAYLRALSLEVAEEIARLEAEVFRLAGHPF-NLNSRDQLERVLFDELGLPAI 209
Query: 253 --LVDMSE-GTLKSILSHSNITQLAKDLILNRLASSGSAILKLNTLSEAVSS-DGRLRGT 308
+ T ++L + IL + ++ L + + GRL
Sbjct: 210 GKTEKTGKRSTSAAVLEALREAHPIVEKILQYRELTKLKSTYIDPLPDLIHPRTGRLHTR 269
Query: 309 LQFYGASRTGRWSGCVFQPQNLPRQERSEEILTQTIQALNRGETIADPLGLASDCVRSCI 368
A+ TGR S QN+P +R
Sbjct: 270 FNQT-ATATGRLSSSDPNLQNIP------------------------VRTPLGQRIRRAF 304
Query: 369 IASNGKKLVVADLAGIEARVLAWIAGEDWKIKAFANGEDIYVTTYAKAFNTPIDKVSKEQ 428
IA G LV D + IE RVLA ++G++ I+ F G DI+ T + F P + V
Sbjct: 305 IAEEGWLLVALDYSQIELRVLAHLSGDENLIRVFQEGRDIHTETASWMFGVPREAVDPLM 364
Query: 429 RAIGKVMELALGYQGGAKVFKTMASHCGLDLQQFSQNVKSTSTFEDWEQAESHHLWMQDQ 488
R K + + Y A L + F+ + + + ++
Sbjct: 365 RRAAKTINFGVLYGMSAHRLSQE-----LAIPYEEAQAFIERYFQSFPKVRAWIEKTLEE 419
Query: 489 YPEFAVKDKLIGTACELVKKAWRAKHQGVLQLWKDLTEGFACVVQEGGSISARRVANVPR 548
+ L G R + K + E +
Sbjct: 420 GRRRGYVETLFGR---------RRYVPDLEARVKSVREAAERMAFNMPVQGTAADL---- 466
Query: 549 LVMRRHKRDVHIVLPSSRRLVYSDVKGDCSYLNTATSQLMRERTYGGKLTENIVQAISRD 608
+L + +
Sbjct: 467 -----------------MKLAMVKLFPRLEEMG--------------------------- 482
Query: 609 ILCEGMKNATKNGYDIVLTVHDEIVSETPDTPYFSVGTL-CSLMTKNPSWAKGLPLKAEG 667
+ +V E P +V L +M A +PL+ E
Sbjct: 483 --ARMLLQVHDE-----------LVLEAPKERAEAVARLAKEVMEGVYPLA--VPLEVEV 527
Query: 668 YEAKRY 673
+ +
Sbjct: 528 GIGEDW 533