HHsearch alignment for GI: 254780128 and conserved domain: COG1591
>COG1591 Holliday junction resolvase - archaeal type [DNA replication, recombination, and repair].
Probab=96.97 E-value=0.012 Score=37.98 Aligned_cols=76 Identities=28% Similarity=0.282 Sum_probs=56.9
Q ss_pred CHHHHHHHHHHHHHHCCCEEEEEECCC--CCCCCEEEEECCCCCEEEEEEECCCC-C--CCHHHHHHH-HHHHHCCCEEE
Q ss_conf 999999999999997898999981188--89874399990698299999976898-8--688999999-99997898899
Q gi|254780128|r 10 TEKDVEKRLVTGAKKLDCWVRKASFVG--RRGCPDRLIITPNGGLWWIEVKKPTG-R--LSHQQMSEI-EELRRRGQRVK 83 (103)
Q Consensus 10 ~E~~ie~~l~~~lk~~G~~~~K~~~~g--~~GvPDli~~~~~g~~~fIEvK~~~g-k--ls~~Q~~~~-~~l~~~G~~~~ 83 (103)
T Consensus 5 kG~~~EReLv~~L~e~GfAvvR~paSG~sk~p~pDivA-~~g~~~l~iE~K~~~~~kiYl~~e~ve~L~~FA~~fGg~p~ 83 (137)
T COG1591 5 KGSRFERELVRILWERGFAVVRAPASGGSKRPLPDIVA-GNGGVYLAIEVKSRRETKIYLDKEQVEKLVEFARRFGGEPY 83 (137)
T ss_pred CCCHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCEEE-CCCCEEEEEEEEECCCCCEEECHHHHHHHHHHHHHCCCCEE
T ss_conf 33268899999998648549983467899999987885-28978999999861588478759999999999997199568
Q ss_pred EEC
Q ss_conf 985
Q gi|254780128|r 84 VLV 86 (103)
Q Consensus 84 Vv~ 86 (103)
T Consensus 84 iav 86 (137)
T COG1591 84 IAV 86 (137)
T ss_pred EEE
T ss_conf 999