HHsearch alignment for GI: 254780128 and conserved domain: COG2810
>COG2810 Predicted type IV restriction endonuclease [Defense mechanisms].
Probab=93.48 E-value=0.77 Score=27.03 Aligned_cols=78 Identities=17% Similarity=0.181 Sum_probs=58.1
Q ss_pred CCCHHHHHHHHHHHH-HHCCCEEEEE--ECC---CCCCCCEEEEECCCCCE-EEEEEECCCCCCCHHHHHHHHHHHHCCC
Q ss_conf 889999999999999-9789899998--118---88987439999069829-9999976898868899999999997898
Q gi|254780128|r 8 YQTEKDVEKRLVTGA-KKLDCWVRKA--SFV---GRRGCPDRLIITPNGGL-WWIEVKKPTGRLSHQQMSEIEELRRRGQ 80 (103)
Q Consensus 8 ~~~E~~ie~~l~~~l-k~~G~~~~K~--~~~---g~~GvPDli~~~~~g~~-~fIEvK~~~gkls~~Q~~~~~~l~~~G~ 80 (103)
T Consensus 20 ~~nEa~vrq~lIlp~L~slGwdi~nPkEV~PEe~t~~GraDyalik-d~kvfafieak~ls~~~akd~qq~~~Yav~~Gv 98 (284)
T COG2810 20 SRNEAAVRQHLILPFLSSLGWDIDNPKEVRPEEKTEEGRADYALIK-DGKVFAFIEAKNLSVNPAKDVQQLAKYAVDKGV 98 (284)
T ss_pred CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEE-CCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCC
T ss_conf 9618888899889999970777899020586424555765448885-693899872113475726899999999885283
Q ss_pred EEEEEC
Q ss_conf 899985
Q gi|254780128|r 81 RVKVLV 86 (103)
Q Consensus 81 ~~~Vv~ 86 (103)
T Consensus 99 ~~~iVt 104 (284)
T COG2810 99 EVGIVT 104 (284)
T ss_pred EEEEEE
T ss_conf 799996