HHsearch alignment of GI: 254780128 and MMDB domain: 1hh1_A_
>1hh1_A (A:) Holliday junction resolving enzyme HJC; holliday junction resolvase, homologous recombination, nuclease domain, archaea; 2.15A {Sulfolobus solfataricus}
Probab=97.04 E-value=0.0045 Score=40.14 Aligned_cols=74 Identities=23% Similarity=0.296 Sum_probs=53.7
Q ss_pred CHHHHHHHHHHHHHHCCCEEEEEECC---CCCCCCEEEEECCCCCEEEEEEECCC-----CCCCHHHHHHHHHHHHC-CC
Q ss_conf 99999999999999789899998118---88987439999069829999997689-----88688999999999978-98
Q gi|254780128|r 10 TEKDVEKRLVTGAKKLDCWVRKASFV---GRRGCPDRLIITPNGGLWWIEVKKPT-----GRLSHQQMSEIEELRRR-GQ 80 (103)
Q Consensus 10 ~E~~ie~~l~~~lk~~G~~~~K~~~~---g~~GvPDli~~~~~g~~~fIEvK~~~-----gkls~~Q~~~~~~l~~~-G~ 80 (103)
.-..-|+.+++++.+.|+.++....- .+.|-||++.. .++..+|||||+-. -.+++.|...+.++... +.
T Consensus 7 ~G~~~E~~a~~~L~~~Gy~ilr~~~~n~~~~~gEiDIIa~-~~~~lvfVEVKtr~~~~~~~~v~~~k~~kl~~~a~~~~~ 85 (143)
T 1hh1_A 7 KGSAVERNIVSRLRDKGFAVVRAPASGSKRKDPIPDIIAL-KNGVIILIEMKSRKDIEGKIYVRREQAEGIIEFARKSGG 85 (143)
T ss_dssp --CHHHHHHHHHHHHTTCEEEECCC-------CCCSEEEE-ETTEEEEEEECCEECTTSCEEECHHHHHHHHHHHHHHTC
T ss_pred CCCHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCEECC-CCCEEEEEEEEECCCCCCCEEEEHHHHHHHHHHHHHHCH
T ss_conf 4447899999999875704999506887776999440246-774399999885157655365208888999999986071
Q ss_pred EEEE
Q ss_conf 8999
Q gi|254780128|r 81 RVKV 84 (103)
Q Consensus 81 ~~~V 84 (103)
..++
T Consensus 86 ~~~i 89 (143)
T 1hh1_A 86 SLFL 89 (143)
T ss_dssp EEEE
T ss_pred HEEE
T ss_conf 3178