HHsearch results for GI: 254780128 and protein with PDBid: 1hh1_A

>1hh1_A Holliday junction resolving enzyme HJC; holliday junction resolvase, homologous recombination, nuclease domain, archaea; 2.15A {Sulfolobus solfataricus} SCOP: c.52.1.18
Probab=96.73  E-value=0.0071  Score=38.01  Aligned_cols=75  Identities=24%  Similarity=0.306  Sum_probs=54.5

Q ss_pred             HHHHHHHHHHHHHHCCCEEEEEE-CCCC--CCCCEEEEECCCCCEEEEEEECCCC-----CCCHHHHHHHHHH-HHCCCE
Q ss_conf             99999999999997898999981-1888--9874399990698299999976898-----8688999999999-978988
Q gi|254780128|r   11 EKDVEKRLVTGAKKLDCWVRKAS-FVGR--RGCPDRLIITPNGGLWWIEVKKPTG-----RLSHQQMSEIEEL-RRRGQR   81 (103)
Q Consensus        11 E~~ie~~l~~~lk~~G~~~~K~~-~~g~--~GvPDli~~~~~g~~~fIEvK~~~g-----kls~~Q~~~~~~l-~~~G~~   81 (103)
                      =...|+.+++.+...|+.|.+.. |++.  .-.||++... ++..+-||||+..+     .++++|..-+..+ +..|..
T Consensus         8 G~~~ERelv~~l~~~Gf~v~R~p~SG~~~~~~~pDivA~~-~~~~~~IEvKs~k~~~~~lyv~~eqve~L~~f~~~fg~~   86 (143)
T 1hh1_A            8 GSAVERNIVSRLRDKGFAVVRAPASGSKRKDPIPDIIALK-NGVIILIEMKSRKDIEGKIYVRREQAEGIIEFARKSGGS   86 (143)
T ss_dssp             -CHHHHHHHHHHHHTTCEEEECCC-------CCCSEEEEE-TTEEEEEEECCEECTTSCEEECHHHHHHHHHHHHHHTCE
T ss_pred             CCHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCEEEEC-CCEEEEEEEEECCCCCCEEEECHHHHHHHHHHHHHCCCE
T ss_conf             4499999999998599408980345788878887389854-986999999981488611776799999999999974998


Q ss_pred             EEEEC
Q ss_conf             99985
Q gi|254780128|r   82 VKVLV   86 (103)
Q Consensus        82 ~~Vv~   86 (103)
                      ..++.
T Consensus        87 ~~iav   91 (143)
T 1hh1_A           87 LFLGV   91 (143)
T ss_dssp             EEEEE
T ss_pred             EEEEE
T ss_conf             99999