HHsearch results for GI: 254780128 and protein with PDBid: 2wcw_A
>2wcw_A HJC; type II restriction endonuclease, hydrolase, DNA binding protein, holliday junction resolvase; 1.58A {Archaeoglobus fulgidus} PDB: 2wcz_A 2wiw_A 2wiz_A 2wj0_A
Probab=97.13 E-value=0.005 Score=38.92 Aligned_cols=77 Identities=21% Similarity=0.195 Sum_probs=54.8
Q ss_pred CHHHHHHHHHHHHHHCCCEEEEEECCCC--CCCCEEEEECCCCCEEEEEEECCCC-C--CCHHHHHHHHHH-HHCCCEEE
Q ss_conf 9999999999999978989999811888--9874399990698299999976898-8--688999999999-97898899
Q gi|254780128|r 10 TEKDVEKRLVTGAKKLDCWVRKASFVGR--RGCPDRLIITPNGGLWWIEVKKPTG-R--LSHQQMSEIEEL-RRRGQRVK 83 (103)
Q Consensus 10 ~E~~ie~~l~~~lk~~G~~~~K~~~~g~--~GvPDli~~~~~g~~~fIEvK~~~g-k--ls~~Q~~~~~~l-~~~G~~~~ 83 (103)
+=+..|+.+++.+..+|+.+.+.-..|. .+.||+++. +++..+.||||+-++ + ++++|...+-.. +..|...+
T Consensus 7 KG~~~ERel~~~l~~~G~~v~R~~~sg~~~~~~pDlia~-~~~~~~~IEvK~~~~~~iy~~~e~~eql~~~a~~~g~~p~ 85 (139)
T 2wcw_A 7 KGTRFERDLLVELWKAGFAAIRVAGAGVSPFPCPDIVAG-NGRTYLAIEVKMRKELPLYLSADEVEQLVTFARGFGAEAY 85 (139)
T ss_dssp CHHHHHHHHHHHHHHTTCEEEEBTTSSSCSSCCCSEEEE-CSSCEEEEEEEECSSSCEEEEHHHHHHHHHHHHHHTCEEE
T ss_pred HCHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCEEEE-CCCCEEEEEEEEECCCEEEECHHHHHHHHHHHHHCCCCEE
T ss_conf 034999999999986897699845566888899989953-7992899999872287053399999999999985799479
Q ss_pred EECC
Q ss_conf 9859
Q gi|254780128|r 84 VLVS 87 (103)
Q Consensus 84 Vv~s 87 (103)
++.-
T Consensus 86 la~K 89 (139)
T 2wcw_A 86 VALK 89 (139)
T ss_dssp EEEE
T ss_pred EEEE
T ss_conf 9999