BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|254780128|ref|YP_003064541.1| VRR-NUC domain-containing
protein [Candidatus Liberibacter asiaticus str. psy62]
(103 letters)
Database: nr
13,984,884 sequences; 4,792,584,752 total letters
Searching..................................................done
Results from round 1
>gi|254780128|ref|YP_003064541.1| VRR-NUC domain-containing protein [Candidatus Liberibacter
asiaticus str. psy62]
gi|254039805|gb|ACT56601.1| VRR-NUC domain-containing protein [Candidatus Liberibacter
asiaticus str. psy62]
gi|317120699|gb|ADV02522.1| endonuclease [Liberibacter phage SC1]
gi|317120843|gb|ADV02664.1| endonuclease [Liberibacter phage SC1]
Length = 103
Score = 215 bits (548), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 103/103 (100%), Positives = 103/103 (100%)
Query: 1 MSFYSFHYQTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKP 60
MSFYSFHYQTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKP
Sbjct: 1 MSFYSFHYQTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKP 60
Query: 61 TGRLSHQQMSEIEELRRRGQRVKVLVSMEEVDNFLEELACTLY 103
TGRLSHQQMSEIEELRRRGQRVKVLVSMEEVDNFLEELACTLY
Sbjct: 61 TGRLSHQQMSEIEELRRRGQRVKVLVSMEEVDNFLEELACTLY 103
>gi|255957557|dbj|BAH96619.1| VRR-NUC domain protein [Candidatus Liberibacter asiaticus]
gi|317120742|gb|ADV02564.1| endonuclease [Liberibacter phage SC2]
gi|317120803|gb|ADV02624.1| endonuclease [Liberibacter phage SC2]
Length = 103
Score = 215 bits (547), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 102/103 (99%), Positives = 103/103 (100%)
Query: 1 MSFYSFHYQTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKP 60
MSFYSFHYQTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKP
Sbjct: 1 MSFYSFHYQTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKP 60
Query: 61 TGRLSHQQMSEIEELRRRGQRVKVLVSMEEVDNFLEELACTLY 103
TGRLSHQQMSEIEELRRRGQRVKVL+SMEEVDNFLEELACTLY
Sbjct: 61 TGRLSHQQMSEIEELRRRGQRVKVLISMEEVDNFLEELACTLY 103
>gi|255957617|dbj|BAH96667.1| VRR-NUC domain protein [Candidatus Liberibacter asiaticus]
gi|255957627|dbj|BAH96675.1| VRR-NUC domain protein [Candidatus Liberibacter asiaticus]
Length = 103
Score = 213 bits (542), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 102/103 (99%), Positives = 102/103 (99%)
Query: 1 MSFYSFHYQTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKP 60
MSFYSFHYQTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKP
Sbjct: 1 MSFYSFHYQTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKP 60
Query: 61 TGRLSHQQMSEIEELRRRGQRVKVLVSMEEVDNFLEELACTLY 103
TGRLSHQQMSEIEELRRRGQRVKVLVSMEEVDNFLEELACT Y
Sbjct: 61 TGRLSHQQMSEIEELRRRGQRVKVLVSMEEVDNFLEELACTSY 103
>gi|255957612|dbj|BAH96663.1| VRR-NUC domain protein [Candidatus Liberibacter asiaticus]
Length = 103
Score = 213 bits (541), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 101/103 (98%), Positives = 102/103 (99%)
Query: 1 MSFYSFHYQTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKP 60
MSFYSFHYQTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKP
Sbjct: 1 MSFYSFHYQTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKP 60
Query: 61 TGRLSHQQMSEIEELRRRGQRVKVLVSMEEVDNFLEELACTLY 103
TGRLSHQQMSEIEELRRRGQRVKVL+SMEEVDNFLEELACT Y
Sbjct: 61 TGRLSHQQMSEIEELRRRGQRVKVLISMEEVDNFLEELACTSY 103
>gi|255957622|dbj|BAH96671.1| VRR-NUC domain protein [Candidatus Liberibacter asiaticus]
gi|255957652|dbj|BAH96695.1| VRR-NUC domain protein [Candidatus Liberibacter asiaticus]
gi|255957657|dbj|BAH96699.1| VRR-NUC domain protein [Candidatus Liberibacter asiaticus]
gi|255957672|dbj|BAH96711.1| VRR-NUC domain protein [Candidatus Liberibacter asiaticus]
Length = 103
Score = 211 bits (538), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 101/103 (98%), Positives = 102/103 (99%)
Query: 1 MSFYSFHYQTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKP 60
MSFYSFHYQTEKDVEKRLVTGA+KLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKP
Sbjct: 1 MSFYSFHYQTEKDVEKRLVTGAEKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKP 60
Query: 61 TGRLSHQQMSEIEELRRRGQRVKVLVSMEEVDNFLEELACTLY 103
TGRLSHQQMSEIEELRRRGQRVKVLVSMEEVDNFLEELACT Y
Sbjct: 61 TGRLSHQQMSEIEELRRRGQRVKVLVSMEEVDNFLEELACTSY 103
>gi|255957602|dbj|BAH96655.1| VRR-NUC domain protein [Candidatus Liberibacter asiaticus]
gi|255957632|dbj|BAH96679.1| VRR-NUC domain protein [Candidatus Liberibacter asiaticus]
gi|255957637|dbj|BAH96683.1| VRR-NUC domain protein [Candidatus Liberibacter asiaticus]
gi|255957642|dbj|BAH96687.1| VRR-NUC domain protein [Candidatus Liberibacter asiaticus]
gi|255957647|dbj|BAH96691.1| VRR-NUC domain protein [Candidatus Liberibacter asiaticus]
gi|255957677|dbj|BAH96715.1| VRR-NUC domain protein [Candidatus Liberibacter asiaticus]
gi|255957682|dbj|BAH96719.1| VRR-NUC domain protein [Candidatus Liberibacter asiaticus]
gi|255957687|dbj|BAH96723.1| VRR-NUC domain protein [Candidatus Liberibacter asiaticus]
Length = 103
Score = 211 bits (537), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 100/103 (97%), Positives = 102/103 (99%)
Query: 1 MSFYSFHYQTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKP 60
MSFYSFHYQTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKP
Sbjct: 1 MSFYSFHYQTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKP 60
Query: 61 TGRLSHQQMSEIEELRRRGQRVKVLVSMEEVDNFLEELACTLY 103
TGRLSHQQMSEIEELRRRGQRVKVL+S+EEVDNFLEELACT Y
Sbjct: 61 TGRLSHQQMSEIEELRRRGQRVKVLISIEEVDNFLEELACTSY 103
>gi|255957592|dbj|BAH96647.1| VRR-NUC domain protein [Candidatus Liberibacter asiaticus]
Length = 103
Score = 210 bits (534), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 101/103 (98%), Positives = 101/103 (98%)
Query: 1 MSFYSFHYQTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKP 60
MSFYSFHYQTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNG LWWIEVKKP
Sbjct: 1 MSFYSFHYQTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGRLWWIEVKKP 60
Query: 61 TGRLSHQQMSEIEELRRRGQRVKVLVSMEEVDNFLEELACTLY 103
TGRLSHQQMSEIEELRRRGQRVKVLVSMEEVDNFLEELACT Y
Sbjct: 61 TGRLSHQQMSEIEELRRRGQRVKVLVSMEEVDNFLEELACTSY 103
>gi|255957662|dbj|BAH96703.1| VRR-NUC domain protein [Candidatus Liberibacter asiaticus]
gi|255957667|dbj|BAH96707.1| VRR-NUC domain protein [Candidatus Liberibacter asiaticus]
Length = 103
Score = 209 bits (533), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 100/103 (97%), Positives = 102/103 (99%)
Query: 1 MSFYSFHYQTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKP 60
MSFYSFHYQTEKDVEKRLVTGA+KLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKP
Sbjct: 1 MSFYSFHYQTEKDVEKRLVTGAEKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKP 60
Query: 61 TGRLSHQQMSEIEELRRRGQRVKVLVSMEEVDNFLEELACTLY 103
TGRLSHQQMSEIEELRRRGQRVKVLVS+EEVDNFLEELACT Y
Sbjct: 61 TGRLSHQQMSEIEELRRRGQRVKVLVSIEEVDNFLEELACTSY 103
>gi|255957562|dbj|BAH96623.1| VRR-NUC domain protein [Candidatus Liberibacter asiaticus]
gi|255957567|dbj|BAH96627.1| VRR-NUC domain protein [Candidatus Liberibacter asiaticus]
gi|255957572|dbj|BAH96631.1| VRR-NUC domain protein [Candidatus Liberibacter asiaticus]
gi|255957577|dbj|BAH96635.1| VRR-NUC domain protein [Candidatus Liberibacter asiaticus]
gi|255957582|dbj|BAH96639.1| VRR-NUC domain protein [Candidatus Liberibacter asiaticus]
gi|255957587|dbj|BAH96643.1| VRR-NUC domain protein [Candidatus Liberibacter asiaticus]
gi|255957597|dbj|BAH96651.1| VRR-NUC domain protein [Candidatus Liberibacter asiaticus]
gi|255957607|dbj|BAH96659.1| VRR-NUC domain protein [Candidatus Liberibacter asiaticus]
Length = 103
Score = 209 bits (531), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 100/103 (97%), Positives = 101/103 (98%)
Query: 1 MSFYSFHYQTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKP 60
MSFYSFHYQTEKDVEKRLVTGA+KLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKP
Sbjct: 1 MSFYSFHYQTEKDVEKRLVTGAEKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKP 60
Query: 61 TGRLSHQQMSEIEELRRRGQRVKVLVSMEEVDNFLEELACTLY 103
TGRLSHQQMSEIEEL RRGQRVKVLVSMEEVDNFLEELACT Y
Sbjct: 61 TGRLSHQQMSEIEELLRRGQRVKVLVSMEEVDNFLEELACTSY 103
>gi|315121968|ref|YP_004062457.1| VRR-NUC domain-containing protein [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|315122936|ref|YP_004063425.1| VRR-NUC domain-containing protein [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495370|gb|ADR51969.1| VRR-NUC domain-containing protein [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313496338|gb|ADR52937.1| VRR-NUC domain-containing protein [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 101
Score = 151 bits (382), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 72/95 (75%), Positives = 81/95 (85%)
Query: 7 HYQTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSH 66
H Q+E ++EKRLV G ++LDCWVRKASFV RGCPDRLIITP G LWWIEVK+P+GRLS
Sbjct: 6 HQQSEHEIEKRLVKGVQQLDCWVRKASFVSHRGCPDRLIITPQGRLWWIEVKQPSGRLSP 65
Query: 67 QQMSEIEELRRRGQRVKVLVSMEEVDNFLEELACT 101
QQ EIEEL RRGQRVKVL S EEVDNFL+ELAC+
Sbjct: 66 QQKIEIEELLRRGQRVKVLFSAEEVDNFLKELACS 100
>gi|254781194|ref|YP_003065607.1| hypothetical protein CLIBASIA_05505 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040871|gb|ACT57667.1| hypothetical protein CLIBASIA_05505 [Candidatus Liberibacter
asiaticus str. psy62]
gi|317120756|gb|ADV02577.1| endonuclease [Candidatus Liberibacter asiaticus]
Length = 98
Score = 105 bits (263), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/93 (55%), Positives = 63/93 (67%)
Query: 8 YQTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQ 67
Y +E +EKRLV G+KKLDC V K F+ +RGCPDRLIITPNG +W+E+K GRLS+
Sbjct: 5 YLSEAKLEKRLVKGSKKLDCLVFKTQFINQRGCPDRLIITPNGAHFWVEMKTSRGRLSNA 64
Query: 68 QMSEIEELRRRGQRVKVLVSMEEVDNFLEELAC 100
Q I L Q+V+VL S EEVD FL L C
Sbjct: 65 QKRVIATLLLYHQKVQVLSSTEEVDGFLRMLEC 97
>gi|318064434|gb|ADV36448.1| gp36 [Edwardsiella phage eiAU]
gi|318064542|gb|ADV36500.1| gp36 [Edwardsiella phage eiDWF]
gi|318064646|gb|ADV36552.1| gp36 [Edwardsiella phage eiMSLS]
Length = 92
Score = 68.2 bits (165), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 48/86 (55%)
Query: 10 TEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQM 69
E V+ L K + VRK S+ GRRGCPD I+ P G + +EVKKP G Q+
Sbjct: 3 PEGKVQAHLQRRFKAIGGLVRKISYEGRRGCPDLFIVLPGGVVVMVEVKKPGGTPEPHQV 62
Query: 70 SEIEELRRRGQRVKVLVSMEEVDNFL 95
EIE LR+RG V V+ S+E D +
Sbjct: 63 REIERLRQRGVPVYVIDSIEGADKLV 88
>gi|41179403|ref|NP_958712.1| Bbp43 [Bordetella phage BPP-1]
gi|45569536|ref|NP_996605.1| hypothetical protein BMP-1p42 [Bordetella phage BMP-1]
gi|45580787|ref|NP_996653.1| hypothetical protein BIP-1p42 [Bordetella phage BIP-1]
gi|40950142|gb|AAR97708.1| Bbp43 [Bordetella phage BPP-1]
Length = 87
Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 52/85 (61%), Gaps = 1/85 (1%)
Query: 11 EKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMS 70
E D+EK LV +KL VRK ++GR G PDRL++ P+ + W+E+K P + Q+
Sbjct: 3 ESDIEKYLVERVRKLGGEVRKVRWIGRNGAPDRLVMLPDRTV-WVELKAPGEKCRPHQIR 61
Query: 71 EIEELRRRGQRVKVLVSMEEVDNFL 95
E E +RR GQRV V+ S E VD L
Sbjct: 62 EHERMRRMGQRVAVVDSHEGVDEVL 86
>gi|238018845|ref|ZP_04599271.1| hypothetical protein VEIDISOL_00705 [Veillonella dispar ATCC
17748]
gi|237864611|gb|EEP65901.1| hypothetical protein VEIDISOL_00705 [Veillonella dispar ATCC
17748]
Length = 110
Score = 63.9 bits (154), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 50/88 (56%)
Query: 11 EKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMS 70
EKD+E+ L KK+ C K G G PDR+I+ P GG+ ++E+K G+L Q
Sbjct: 2 EKDIERWLGNQLKKMGCIYMKFVSPGNDGVPDRIIVLPGGGVIFVELKDTNGKLMANQRV 61
Query: 71 EIEELRRRGQRVKVLVSMEEVDNFLEEL 98
+I LR++G V V+ M + F+E++
Sbjct: 62 QISRLRKQGALVFVVTGMPDAKLFVEDM 89
>gi|312897718|ref|ZP_07757134.1| VRR-NUC domain protein [Megasphaera micronuciformis F0359]
gi|310621102|gb|EFQ04646.1| VRR-NUC domain protein [Megasphaera micronuciformis F0359]
Length = 111
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 50/86 (58%)
Query: 11 EKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMS 70
E+D+EK+LV G KKL K G G PDR++I P+G + +IE+K G+LS Q +
Sbjct: 18 ERDIEKKLVAGVKKLGGRAYKFVSPGNIGVPDRIVIWPDGSIEFIELKTAKGQLSKTQAT 77
Query: 71 EIEELRRRGQRVKVLVSMEEVDNFLE 96
+I L+ V +L M+ V+ +L
Sbjct: 78 QIARLQAMECNVHILYGMDAVNAYLN 103
>gi|71276268|ref|ZP_00652546.1| phage-related protein [Xylella fastidiosa Dixon]
gi|71902065|ref|ZP_00684105.1| phage-related protein [Xylella fastidiosa Ann-1]
gi|71162876|gb|EAO12600.1| phage-related protein [Xylella fastidiosa Dixon]
gi|71728176|gb|EAO30367.1| phage-related protein [Xylella fastidiosa Ann-1]
Length = 92
Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 49/85 (57%)
Query: 11 EKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMS 70
E+ +E+ LV + +RK + GR G PDR+ + P G W+E+K P + + Q+
Sbjct: 7 ERTIERYLVAQVRAKGGEIRKVKWGGRHGAPDRIAMLPEGRTLWVELKAPGQQCTPHQVR 66
Query: 71 EIEELRRRGQRVKVLVSMEEVDNFL 95
E E LRR GQRV V+ S++ VD L
Sbjct: 67 EHERLRRMGQRVVVVDSLKGVDEVL 91
>gi|71274494|ref|ZP_00650782.1| phage-related protein [Xylella fastidiosa Dixon]
gi|71900323|ref|ZP_00682458.1| phage-related protein [Xylella fastidiosa Ann-1]
gi|71164226|gb|EAO13940.1| phage-related protein [Xylella fastidiosa Dixon]
gi|71729898|gb|EAO31994.1| phage-related protein [Xylella fastidiosa Ann-1]
Length = 92
Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 48/85 (56%)
Query: 11 EKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMS 70
E+ +E+ LV + +RK + GR G PDR+ + P G W+E+K P + + Q+
Sbjct: 7 ERTIERYLVAQVRAKGGEIRKVKWGGRHGAPDRIAMLPEGRTLWVELKAPGQQCTPHQVR 66
Query: 71 EIEELRRRGQRVKVLVSMEEVDNFL 95
E E LRR GQRV V+ S + VD L
Sbjct: 67 EHERLRRMGQRVVVVDSFKGVDEVL 91
>gi|71899885|ref|ZP_00682033.1| phage-related protein [Xylella fastidiosa Ann-1]
gi|71730325|gb|EAO32408.1| phage-related protein [Xylella fastidiosa Ann-1]
Length = 92
Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 49/85 (57%)
Query: 11 EKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMS 70
E+ +E+ LV + +RK + GR G PDR+ + P G W+E+K P + + Q+
Sbjct: 7 ERTIERYLVAQVRAKGGEIRKVKWGGRHGAPDRIAMLPEGRTLWVELKAPGQQCTPHQVR 66
Query: 71 EIEELRRRGQRVKVLVSMEEVDNFL 95
E E +RR GQRV V+ S++ VD L
Sbjct: 67 EHERMRRMGQRVVVVDSLKGVDEVL 91
>gi|28199027|ref|NP_779341.1| hypothetical protein PD1135 [Xylella fastidiosa Temecula1]
gi|28199080|ref|NP_779394.1| hypothetical protein PD1192 [Xylella fastidiosa Temecula1]
gi|28199603|ref|NP_779917.1| hypothetical protein PD1728 [Xylella fastidiosa Temecula1]
gi|182681749|ref|YP_001829909.1| VRR-NUC domain-containing protein [Xylella fastidiosa M23]
gi|182681806|ref|YP_001829966.1| VRR-NUC domain-containing protein [Xylella fastidiosa M23]
gi|28057125|gb|AAO28990.1| phage-related protein [Xylella fastidiosa Temecula1]
gi|28057178|gb|AAO29043.1| phage-related protein [Xylella fastidiosa Temecula1]
gi|28057718|gb|AAO29566.1| phage-related protein [Xylella fastidiosa Temecula1]
gi|182631859|gb|ACB92635.1| VRR-NUC domain protein [Xylella fastidiosa M23]
gi|182631916|gb|ACB92692.1| VRR-NUC domain protein [Xylella fastidiosa M23]
gi|307578625|gb|ADN62594.1| VRR-NUC domain-containing protein [Xylella fastidiosa subsp.
fastidiosa GB514]
gi|307580178|gb|ADN64147.1| VRR-NUC domain-containing protein [Xylella fastidiosa subsp.
fastidiosa GB514]
gi|307580242|gb|ADN64211.1| VRR-NUC domain-containing protein [Xylella fastidiosa subsp.
fastidiosa GB514]
Length = 92
Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 49/85 (57%)
Query: 11 EKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMS 70
E+ +E+ LV + +RK + GR G PDR+ + PNG W+E+K P + + Q+
Sbjct: 7 ERTIERYLVAQVRAKGGEIRKVKWGGRHGAPDRIAMLPNGRTLWVELKAPGQQCTPHQVR 66
Query: 71 EIEELRRRGQRVKVLVSMEEVDNFL 95
E E +R GQRV V+ S++ VD L
Sbjct: 67 EHERMRGMGQRVVVVDSLKGVDEVL 91
>gi|182682344|ref|YP_001830504.1| VRR-NUC domain-containing protein [Xylella fastidiosa M23]
gi|273810425|ref|YP_003344896.1| putative nuclease [Xylella phage Xfas53]
gi|182632454|gb|ACB93230.1| VRR-NUC domain protein [Xylella fastidiosa M23]
gi|257097800|gb|ACV41106.1| putative nuclease [Xylella phage Xfas53]
Length = 91
Score = 61.6 bits (148), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 49/85 (57%)
Query: 11 EKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMS 70
E+ +E+ LV + +RK + GR G PDR+ + PNG W+E+K P + + Q+
Sbjct: 6 ERTIERYLVAQVRAKGGEIRKVKWGGRHGAPDRIAMLPNGRTLWVELKAPGQQCTPHQVR 65
Query: 71 EIEELRRRGQRVKVLVSMEEVDNFL 95
E E +R GQRV V+ S++ VD L
Sbjct: 66 EHERMRGMGQRVVVVDSLKGVDEVL 90
>gi|28198297|ref|NP_778611.1| hypothetical protein PD0380 [Xylella fastidiosa Temecula1]
gi|182680934|ref|YP_001829094.1| VRR-NUC domain-containing protein [Xylella fastidiosa M23]
gi|28056367|gb|AAO28260.1| phage-related protein [Xylella fastidiosa Temecula1]
gi|182631044|gb|ACB91820.1| VRR-NUC domain protein [Xylella fastidiosa M23]
gi|307579402|gb|ADN63371.1| VRR-NUC domain-containing protein [Xylella fastidiosa subsp.
fastidiosa GB514]
Length = 92
Score = 61.6 bits (148), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 49/85 (57%)
Query: 11 EKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMS 70
E+ +E+ LV + +RK + GR G PDR+ + PNG W+E+K P + + Q+
Sbjct: 7 ERTIERYLVAQVRAKGGEIRKVKWEGRHGAPDRIAMLPNGRTLWVELKAPGQQCTPHQVR 66
Query: 71 EIEELRRRGQRVKVLVSMEEVDNFL 95
E E +R GQRV V+ S++ VD L
Sbjct: 67 EHERMRGMGQRVVVVDSLKGVDEVL 91
>gi|170729636|ref|YP_001775069.1| hypothetical protein Xfasm12_0425 [Xylella fastidiosa M12]
gi|170730323|ref|YP_001775756.1| hypothetical protein Xfasm12_1175 [Xylella fastidiosa M12]
gi|170730596|ref|YP_001776029.1| hypothetical protein Xfasm12_1483 [Xylella fastidiosa M12]
gi|167964429|gb|ACA11439.1| conserved hypothetical protein [Xylella fastidiosa M12]
gi|167965116|gb|ACA12126.1| conserved hypothetical protein [Xylella fastidiosa M12]
gi|167965389|gb|ACA12399.1| conserved hypothetical protein [Xylella fastidiosa M12]
Length = 92
Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 49/85 (57%)
Query: 11 EKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMS 70
E+ +E+ LV + +RK + GR G PDR+ + P G W+E+K P + + Q+
Sbjct: 7 ERTIERYLVAQVRAKGGEIRKVKWGGRHGAPDRIAMLPEGRTLWVELKAPGQQCTLHQVR 66
Query: 71 EIEELRRRGQRVKVLVSMEEVDNFL 95
E E +RR GQRV V+ S++ VD L
Sbjct: 67 EHERMRRMGQRVVVVDSLKGVDEVL 91
>gi|225405818|ref|ZP_03761007.1| hypothetical protein CLOSTASPAR_05039 [Clostridium asparagiforme
DSM 15981]
gi|225042658|gb|EEG52904.1| hypothetical protein CLOSTASPAR_05039 [Clostridium asparagiforme
DSM 15981]
Length = 96
Score = 61.2 bits (147), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 50/87 (57%)
Query: 11 EKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMS 70
EKD+E++LV G K+L K + G G PDR++ P +E+K TG+LS Q
Sbjct: 3 EKDIEQKLVQGVKRLGGRAFKWTSPGNDGVPDRIVFLPGRPPVLVELKTDTGKLSALQRI 62
Query: 71 EIEELRRRGQRVKVLVSMEEVDNFLEE 97
+I LR GQ V+VL +++V FL E
Sbjct: 63 QIGRLRDLGQDVRVLYGLDQVLEFLNE 89
>gi|258646423|ref|ZP_05733892.1| putative protein p44 [Dialister invisus DSM 15470]
gi|260403826|gb|EEW97373.1| putative protein p44 [Dialister invisus DSM 15470]
Length = 105
Score = 61.2 bits (147), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 49/87 (56%)
Query: 9 QTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQ 68
+E+D EK LV+ KKL K + G G PDR+II P G + ++E+K TG LS Q
Sbjct: 6 HSERDAEKLLVSKIKKLGGRAYKFTSPGSAGVPDRIIILPGGYVEFVEMKSETGMLSVLQ 65
Query: 69 MSEIEELRRRGQRVKVLVSMEEVDNFL 95
I LR G V+VL ++VD ++
Sbjct: 66 KICISHLRSLGCHVEVLYGAKDVDTYV 92
>gi|71275470|ref|ZP_00651756.1| phage-related protein [Xylella fastidiosa Dixon]
gi|71276172|ref|ZP_00652452.1| phage-related protein [Xylella fastidiosa Dixon]
gi|71898327|ref|ZP_00680500.1| phage-related protein [Xylella fastidiosa Ann-1]
gi|71900966|ref|ZP_00683079.1| phage-related protein [Xylella fastidiosa Ann-1]
gi|71163090|gb|EAO12812.1| phage-related protein [Xylella fastidiosa Dixon]
gi|71163770|gb|EAO13486.1| phage-related protein [Xylella fastidiosa Dixon]
gi|71729271|gb|EAO31389.1| phage-related protein [Xylella fastidiosa Ann-1]
gi|71731850|gb|EAO33908.1| phage-related protein [Xylella fastidiosa Ann-1]
Length = 92
Score = 61.2 bits (147), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 48/85 (56%)
Query: 11 EKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMS 70
E+ +E+ LV + +RK + GR G PDR+ + P G W+E+K P + + Q+
Sbjct: 7 ERTIERYLVAQVRAKGGEIRKVKWGGRHGAPDRIAMLPEGRTLWVELKAPGQQCTPHQVR 66
Query: 71 EIEELRRRGQRVKVLVSMEEVDNFL 95
E E +RR GQRV V+ S + VD L
Sbjct: 67 EHERMRRMGQRVVVVDSFKGVDEVL 91
>gi|15837284|ref|NP_297972.1| hypothetical protein XF0682 [Xylella fastidiosa 9a5c]
gi|15838883|ref|NP_299571.1| hypothetical protein XF2292 [Xylella fastidiosa 9a5c]
gi|15839116|ref|NP_299804.1| hypothetical protein XF2526 [Xylella fastidiosa 9a5c]
gi|9105564|gb|AAF83492.1|AE003912_4 phage-related protein [Xylella fastidiosa 9a5c]
gi|9107456|gb|AAF85091.1|AE004041_3 phage-related protein [Xylella fastidiosa 9a5c]
gi|9107732|gb|AAF85324.1|AE004059_14 phage-related protein [Xylella fastidiosa 9a5c]
Length = 92
Score = 60.5 bits (145), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 48/85 (56%)
Query: 11 EKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMS 70
E+ +E+ LV + +RK + GR G PDR+ + PNG W+E+K P + + Q+
Sbjct: 7 ERTIERYLVAQVRAKGGEIRKVKWGGRHGAPDRIAMLPNGRTLWVELKAPGKQCTPHQVR 66
Query: 71 EIEELRRRGQRVKVLVSMEEVDNFL 95
E +RR GQ V V+ S++ VD L
Sbjct: 67 EHARMRRMGQHVVVVDSLKGVDEVL 91
>gi|71901492|ref|ZP_00683579.1| phage-related protein [Xylella fastidiosa Ann-1]
gi|71728748|gb|EAO30892.1| phage-related protein [Xylella fastidiosa Ann-1]
Length = 92
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 48/85 (56%)
Query: 11 EKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMS 70
E+ +E+ LV K +RK + GR G PDR+ + P G W+E+K P + + Q+
Sbjct: 7 ERTIERYLVAQVKAKGGEIRKVKWGGRHGAPDRIAMLPEGRTLWVELKAPGQQCTPHQVR 66
Query: 71 EIEELRRRGQRVKVLVSMEEVDNFL 95
E E +R GQRV V+ S++ VD L
Sbjct: 67 EHERMRGMGQRVVVVDSLKGVDEVL 91
>gi|134288569|ref|YP_001110808.1| hypothetical protein SPSV3_gp08 [Salmonella phage SETP3]
gi|125631934|gb|ABN47337.1| hypothetical protein [Salmonella phage SETP3]
Length = 95
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 25 LDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTG-RLSHQQMSEIEELRRRGQRVK 83
L VRK S+ GR G PD L+I P G +W++EVKK + Q+ E E R+RG V
Sbjct: 19 LGGLVRKLSYEGRSGAPDLLVILPRGVIWFVEVKKDENTKPDPHQLREHERFRKRGANVF 78
Query: 84 VLVSMEEVDNFLE 96
V+ S ++VD +E
Sbjct: 79 VVGSFKQVDKLIE 91
>gi|71897668|ref|ZP_00679913.1| phage-related protein [Xylella fastidiosa Ann-1]
gi|71898926|ref|ZP_00681093.1| phage-related protein [Xylella fastidiosa Ann-1]
gi|71731338|gb|EAO33402.1| phage-related protein [Xylella fastidiosa Ann-1]
gi|71732571|gb|EAO34624.1| phage-related protein [Xylella fastidiosa Ann-1]
Length = 92
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 48/85 (56%)
Query: 11 EKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMS 70
E+ +E+ LV + +RK + GR G PDR+ + P G W+E+K P + + Q+
Sbjct: 7 ERTIERYLVAQVRAKGGEIRKVKWGGRHGAPDRIAMLPEGRTLWVELKAPGQQCTPHQVR 66
Query: 71 EIEELRRRGQRVKVLVSMEEVDNFL 95
E E +R GQRV V+ S++ VD L
Sbjct: 67 EHERMRGMGQRVVVVDSLKGVDEVL 91
>gi|266623805|ref|ZP_06116740.1| putative protein p44 [Clostridium hathewayi DSM 13479]
gi|288864377|gb|EFC96675.1| putative protein p44 [Clostridium hathewayi DSM 13479]
Length = 111
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 48/87 (55%)
Query: 11 EKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMS 70
EKD+EK LV KKL K G G PDR++I P ++E+K GRLS Q
Sbjct: 3 EKDIEKILVNEVKKLGGRAYKWVSPGNDGVPDRIVILPGLRPVFVELKTEKGRLSAIQRV 62
Query: 71 EIEELRRRGQRVKVLVSMEEVDNFLEE 97
+IE L++ Q V VL +V +FLEE
Sbjct: 63 QIERLKKMKQDVSVLYGEPQVRDFLEE 89
>gi|282533170|gb|ADA82279.1| hypothetical protein [Escherichia phage K1G]
gi|282534221|gb|ADA82329.1| hypothetical protein [Escherichia phage K1H]
Length = 99
Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 25 LDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKP-TGRLSHQQMSEIEELRRRGQRVK 83
L VRK S+ GR G PD L+I P G +W++EVKK + Q+ E E +R+RG V
Sbjct: 23 LGGLVRKLSYEGRSGAPDLLVILPGGIVWFVEVKKDENTKPDPHQLREHERMRKRGANVF 82
Query: 84 VLVSMEEVDNFL 95
V+ S ++VD+ +
Sbjct: 83 VVGSFKQVDDLI 94
>gi|71898990|ref|ZP_00681156.1| phage-related protein [Xylella fastidiosa Ann-1]
gi|71901325|ref|ZP_00683421.1| phage-related protein [Xylella fastidiosa Ann-1]
gi|71728909|gb|EAO31044.1| phage-related protein [Xylella fastidiosa Ann-1]
gi|71731236|gb|EAO33301.1| phage-related protein [Xylella fastidiosa Ann-1]
Length = 92
Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 48/85 (56%)
Query: 11 EKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMS 70
E+ +E+ LV + +RK + GR G PDR+ + P G W+E+K P + + Q+
Sbjct: 7 ERIIERYLVAQVRAKGGEIRKVKWGGRHGAPDRIAMLPEGRTLWVELKAPGQQCTPHQVR 66
Query: 71 EIEELRRRGQRVKVLVSMEEVDNFL 95
E E +R GQRV V+ S++ VD L
Sbjct: 67 EHERMRGMGQRVVVVDSLKGVDEVL 91
>gi|66395482|ref|YP_239851.1| ORF037 [Staphylococcus phage 2638A]
gi|62635909|gb|AAX91020.1| ORF037 [Staphylococcus phage 2638A]
Length = 98
Score = 57.0 bits (136), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 49/90 (54%)
Query: 11 EKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMS 70
E ++EK LV KK K G RG PDR++I P G +++E+K+P GR Q
Sbjct: 3 ESNIEKYLVKEVKKKKGLCLKWVAPGTRGVPDRIVIMPKGKTYYVEMKQPKGRTDPLQKY 62
Query: 71 EIEELRRRGQRVKVLVSMEEVDNFLEELAC 100
++L RG +V L ++VD F++++
Sbjct: 63 MHKQLEDRGHQVFTLWDKKQVDEFIKKVGA 92
>gi|227872573|ref|ZP_03990909.1| VRR-NUC domain protein [Oribacterium sinus F0268]
gi|227841574|gb|EEJ51868.1| VRR-NUC domain protein [Oribacterium sinus F0268]
Length = 103
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 49/90 (54%)
Query: 9 QTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQ 68
+ EK VEK +V L C K RG PDRL IT G +++ E+K GRLS Q
Sbjct: 3 EQEKKVEKAMVRMLWNLGCESYKFVSPNCRGVPDRLFITEEGKVFFAELKTIKGRLSSLQ 62
Query: 69 MSEIEELRRRGQRVKVLVSMEEVDNFLEEL 98
++I++L+ Q V V+ ME V F+E+
Sbjct: 63 ENQIKKLKALKQEVYVIYGMEGVRKFVEDF 92
>gi|302873664|ref|YP_003842297.1| VRR-NUC domain-containing protein [Clostridium cellulovorans
743B]
gi|307686612|ref|ZP_07629058.1| VRR-NUC domain-containing protein [Clostridium cellulovorans
743B]
gi|302576521|gb|ADL50533.1| VRR-NUC domain-containing protein [Clostridium cellulovorans
743B]
Length = 92
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 46/88 (52%)
Query: 11 EKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMS 70
E +EK L KK K G G PDRL++ PNG + ++E+K P + H Q+
Sbjct: 3 ESKIEKALTIELKKRGGMALKFVSPGMAGVPDRLVLIPNGEVIFVELKAPGKTMRHLQLK 62
Query: 71 EIEELRRRGQRVKVLVSMEEVDNFLEEL 98
+L G RV V+ S+ VD+F+ E+
Sbjct: 63 RKSQLENLGFRVYVIDSLGGVDSFVREV 90
>gi|70726781|ref|YP_253695.1| hypothetical protein SH1780 [Staphylococcus haemolyticus
JCSC1435]
gi|68447505|dbj|BAE05089.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435]
Length = 92
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 49/89 (55%)
Query: 11 EKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMS 70
E +E LV KKL K G RG PDR++I P G +++E+K+P GR+ Q
Sbjct: 3 ESKIESYLVREVKKLKGLCLKWVSPGTRGVPDRIVIMPKGKTYYVEMKQPNGRVDPLQQY 62
Query: 71 EIEELRRRGQRVKVLVSMEEVDNFLEELA 99
++L R +V L + E+V+ F++++
Sbjct: 63 MHKQLTNRDHQVFTLWTKEQVNEFIKKVG 91
>gi|62327353|ref|YP_224066.1| hypothetical protein BPKS7gp44 [Salmonella phage SS3e]
gi|57472387|gb|AAW51249.1| hypothetical protein [Salmonella phage SS3e]
Length = 95
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 25 LDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTG-RLSHQQMSEIEELRRRGQRVK 83
L VRK S+ R G PD L+I P G +W++EVKK + Q+ E E +R+RG V
Sbjct: 19 LGGLVRKLSYENRVGAPDLLVILPGGIIWFVEVKKDENTKPDPHQLREHERMRKRGANVF 78
Query: 84 VLVSMEEVDNFLE 96
V+ S ++VD +E
Sbjct: 79 VVGSKKQVDKLIE 91
>gi|302876788|ref|YP_003845421.1| VRR-NUC domain-containing protein [Clostridium cellulovorans
743B]
gi|307687469|ref|ZP_07629915.1| VRR-NUC domain-containing protein [Clostridium cellulovorans
743B]
gi|302579645|gb|ADL53657.1| VRR-NUC domain-containing protein [Clostridium cellulovorans
743B]
Length = 92
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 48/88 (54%)
Query: 11 EKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMS 70
EK +EK+L+T KK K G G PDR+++ P G ++EVK P + Q+S
Sbjct: 3 EKQIEKKLITEVKKRGGICPKWVSPGFDGVPDRIVLLPGGKFAFVEVKAPGEKPRPLQVS 62
Query: 71 EIEELRRRGQRVKVLVSMEEVDNFLEEL 98
+ LRR G RV VL M ++ L+E+
Sbjct: 63 RHKLLRRLGFRVYVLDDMSQIGGILDEI 90
>gi|254975144|ref|ZP_05271616.1| VRR-NUC domain-containing protein [Clostridium difficile
QCD-66c26]
gi|255092534|ref|ZP_05322012.1| VRR-NUC domain-containing protein [Clostridium difficile CIP
107932]
gi|255306561|ref|ZP_05350732.1| VRR-NUC domain-containing protein [Clostridium difficile ATCC
43255]
gi|255314271|ref|ZP_05355854.1| VRR-NUC domain-containing protein [Clostridium difficile
QCD-76w55]
gi|255516951|ref|ZP_05384627.1| VRR-NUC domain-containing protein [Clostridium difficile
QCD-97b34]
gi|255650053|ref|ZP_05396955.1| VRR-NUC domain-containing protein [Clostridium difficile
QCD-37x79]
gi|306519588|ref|ZP_07405935.1| phage-like protein [Clostridium difficile QCD-32g58]
Length = 108
Score = 55.5 bits (132), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 51/88 (57%)
Query: 11 EKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMS 70
E +EKRL + L K G G PDR+++ P G + ++E+K P +L Q
Sbjct: 3 ESKIEKRLKKEIELLGGKAMKFISPGEAGVPDRIVLLPEGHVIFVELKAPGKKLRKLQQY 62
Query: 71 EIEELRRRGQRVKVLVSMEEVDNFLEEL 98
++ ELR G +VK + +++E+D+F++E+
Sbjct: 63 KMRELRELGFKVKCVSTLKEIDDFIKEV 90
>gi|320140664|gb|EFW32518.1| VRR-NUC domain protein [Staphylococcus aureus subsp. aureus
MRSA131]
gi|320142764|gb|EFW34567.1| VRR-NUC domain protein [Staphylococcus aureus subsp. aureus
MRSA177]
Length = 116
Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 48/95 (50%)
Query: 8 YQTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQ 67
Y E +EK LV KL+ K G RG PDR+II P G +++E+K+ G+L
Sbjct: 20 YMKESTLEKYLVKEISKLNGLCLKWVAPGTRGVPDRIIIMPEGKTYFVEMKQEKGKLHPL 79
Query: 68 QMSEIEELRRRGQRVKVLVSMEEVDNFLEELACTL 102
Q + R +V VL + E+V+ F+ + T
Sbjct: 80 QKYVHRQFENRDHKVYVLWNKEQVNTFIRMVGGTF 114
>gi|153940485|ref|YP_001391669.1| VRR-NUC domain-containing protein [Clostridium botulinum F str.
Langeland]
gi|152936381|gb|ABS41879.1| VRR-NUC domain protein [Clostridium botulinum F str. Langeland]
Length = 93
Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 49/86 (56%)
Query: 11 EKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMS 70
E +EKRL +KL K G G PDR+++ P G + ++E+K P + Q
Sbjct: 3 ESRIEKRLKKEIEKLGGKALKFVSPGVSGVPDRIVLLPEGRIIFVELKAPGKKPRPIQKY 62
Query: 71 EIEELRRRGQRVKVLVSMEEVDNFLE 96
I+ELR G RV+++ S+E ++NF+E
Sbjct: 63 RIKELRSLGFRVEIIDSIERINNFVE 88
>gi|225220077|ref|YP_002720044.1| hypothetical protein EpSSL_gp05 [Enterobacteria phage SSL-2009a]
gi|224986018|gb|ACN74582.1| hypothetical protein [Enterobacteria phage SSL-2009a]
Length = 92
Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 52/90 (57%), Gaps = 1/90 (1%)
Query: 11 EKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMS 70
E ++ L+ K + + RK ++ GR G PD LII NG + ++EVK+P G+ Q+
Sbjct: 4 EGRIQIYLMKQVKAVGGFCRKVAWEGRAGAPD-LIIIINGKIVFVEVKRPGGKPKPHQIR 62
Query: 71 EIEELRRRGQRVKVLVSMEEVDNFLEELAC 100
E E + RRG V+V+ ++++ D + EL
Sbjct: 63 EHERMARRGADVRVIDNIDDCDLLVAELVA 92
>gi|273810590|ref|YP_003344971.1| gp36 [Sodalis phage SO-1]
gi|258619875|gb|ACV84128.1| gp36 [Sodalis phage SO-1]
Length = 92
Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 52/90 (57%), Gaps = 1/90 (1%)
Query: 11 EKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMS 70
E ++ L+ K++ + RK ++ GR G PD LII NG + ++EVK+P G+ Q+
Sbjct: 4 EGKIQSHLMRRVKEVGGFCRKLAWEGRAGAPD-LIIIINGKIVFVEVKRPGGKPKPHQVR 62
Query: 71 EIEELRRRGQRVKVLVSMEEVDNFLEELAC 100
E E + RRG V+V+ ++ + D + EL
Sbjct: 63 EHERMARRGADVRVIDNISDCDLLVAELVA 92
>gi|168179445|ref|ZP_02614109.1| phage associated protein [Clostridium botulinum NCTC 2916]
gi|182669696|gb|EDT81672.1| phage associated protein [Clostridium botulinum NCTC 2916]
Length = 91
Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 49/88 (55%)
Query: 11 EKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMS 70
E +EKRL +KL K G G PDR+++ P G + ++E+K P + Q
Sbjct: 3 ESSIEKRLKKEIEKLSGKALKFVSPGVSGVPDRIVLLPQGRIIFVELKAPGKKPRPIQKY 62
Query: 71 EIEELRRRGQRVKVLVSMEEVDNFLEEL 98
I+EL G RV+++ S+E ++NF+ E+
Sbjct: 63 RIKELTALGFRVEIIDSIEGINNFIREI 90
>gi|237738631|ref|ZP_04569112.1| conserved hypothetical protein [Fusobacterium sp. 2_1_31]
gi|229424114|gb|EEO39161.1| conserved hypothetical protein [Fusobacterium sp. 2_1_31]
Length = 102
Score = 53.9 bits (128), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 52/92 (56%), Gaps = 2/92 (2%)
Query: 9 QTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGR--LSH 66
++E+++E LV K + K + G G PDR++I P G ++++E+K R LS
Sbjct: 3 KSEREIEAYLVKSIKNKNGLCMKWTSPGNAGVPDRIVIVPGGDVYFVELKAEGKREDLSP 62
Query: 67 QQMSEIEELRRRGQRVKVLVSMEEVDNFLEEL 98
Q + I +L+ +V+ S +EVD F+EE+
Sbjct: 63 LQRNFINKLKNLNCDARVIASFKEVDEFIEEV 94
>gi|156603989|ref|YP_001429935.1| hypothetical protein SPTP3102_gp40 [Staphylococcus phage tp310-2]
gi|154818075|gb|ABS87502.1| hypothetical protein [Staphylococcus phage tp310-2]
Length = 96
Score = 53.9 bits (128), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 47/92 (51%)
Query: 11 EKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMS 70
E +EK LV KL+ K G RG PDR+II P G +++E+K+ G+L Q
Sbjct: 3 ETTLEKYLVKEITKLNGLCLKWVAPGTRGVPDRIIIMPEGKTYFVEMKQEKGKLHPLQKY 62
Query: 71 EIEELRRRGQRVKVLVSMEEVDNFLEELACTL 102
+ R RV VL + E+V+ F+ + T
Sbjct: 63 VHRQFENRDHRVYVLWNKEQVNTFIRMVGGTF 94
>gi|293400002|ref|ZP_06644148.1| hypothetical protein HMPREF0863_00285 [Erysipelotrichaceae
bacterium 5_2_54FAA]
gi|291306402|gb|EFE47645.1| hypothetical protein HMPREF0863_00285 [Erysipelotrichaceae
bacterium 5_2_54FAA]
Length = 106
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 51/89 (57%), Gaps = 2/89 (2%)
Query: 11 EKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKP-TGRLSHQQM 69
E+ VEK L L K + G G PDR+II NG + ++E+K+P GR+S Q
Sbjct: 12 ERQVEKYLTDKISNLGGLPWKFTSPGTAGVPDRIIIM-NGLICFVELKRPRGGRISDMQQ 70
Query: 70 SEIEELRRRGQRVKVLVSMEEVDNFLEEL 98
IE+LR++G + V+ + EEVD +E +
Sbjct: 71 WRIEQLRKQGMKAYVIKNKEEVDYLVEHM 99
>gi|282911094|ref|ZP_06318896.1| gp33 [Staphylococcus aureus subsp. aureus WBG10049]
gi|282324789|gb|EFB55099.1| gp33 [Staphylococcus aureus subsp. aureus WBG10049]
Length = 96
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 46/92 (50%)
Query: 11 EKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMS 70
E +EK LV KL+ K G RG PDR+II P G +++E+K+ G+L Q
Sbjct: 3 ESTLEKYLVKEITKLNGLCLKWVAPGTRGVPDRIIIMPEGKTYFVEMKQEKGKLHPLQKY 62
Query: 71 EIEELRRRGQRVKVLVSMEEVDNFLEELACTL 102
+ R V VL + E+VD F+ + T
Sbjct: 63 VHRQFENRDHTVYVLWNKEQVDEFIRMVGGTF 94
>gi|87161853|ref|YP_494106.1| hypothetical protein SAUSA300_1409 [Staphylococcus aureus subsp.
aureus USA300_FPR3757]
gi|161509686|ref|YP_001575345.1| hypothetical protein USA300HOU_1457 [Staphylococcus aureus subsp.
aureus USA300_TCH1516]
gi|294848485|ref|ZP_06789231.1| hypothetical protein SKAG_00548 [Staphylococcus aureus A9754]
gi|300911908|ref|ZP_07129351.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
TCH70]
gi|87127827|gb|ABD22341.1| conserved hypothetical phage protein [Staphylococcus aureus subsp.
aureus USA300_FPR3757]
gi|160368495|gb|ABX29466.1| hypothetical bacteriophage protein [Staphylococcus aureus subsp.
aureus USA300_TCH1516]
gi|294824511|gb|EFG40934.1| hypothetical protein SKAG_00548 [Staphylococcus aureus A9754]
gi|300886154|gb|EFK81356.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
TCH70]
gi|315197729|gb|EFU28063.1| hypothetical bacteriophage protein [Staphylococcus aureus subsp.
aureus CGS01]
Length = 96
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 47/92 (51%)
Query: 11 EKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMS 70
E +EK LV KL+ K G RG PDR+II P G +++E+K+ G+L Q
Sbjct: 3 ESTLEKYLVKEISKLNGLCLKWVAPGTRGVPDRIIIMPEGKTYFVEMKQEKGKLHPLQKY 62
Query: 71 EIEELRRRGQRVKVLVSMEEVDNFLEELACTL 102
+ R +V VL + E+V+ F+ + T
Sbjct: 63 VHRQFENRDHKVYVLWNKEQVNTFIRMVGGTF 94
>gi|29028642|ref|NP_803331.1| phi related protein [Staphylococcus phage phi 12]
gi|66395698|ref|YP_240069.1| ORF044 [Staphylococcus phage 47]
gi|88195256|ref|YP_500059.1| phi related protein [Staphylococcus aureus subsp. aureus NCTC 8325]
gi|148267488|ref|YP_001246431.1| VRR-NUC [Staphylococcus aureus subsp. aureus JH9]
gi|150393542|ref|YP_001316217.1| VRR-NUC domain-containing protein [Staphylococcus aureus subsp.
aureus JH1]
gi|253315480|ref|ZP_04838693.1| VRR-NUC domain-containing protein [Staphylococcus aureus subsp.
aureus str. CF-Marseille]
gi|258420305|ref|ZP_05683252.1| VRR-NUC domain-containing protein [Staphylococcus aureus A9719]
gi|258427144|ref|ZP_05688066.1| VRR-NUC domain-containing protein [Staphylococcus aureus A9299]
gi|258448844|ref|ZP_05696954.1| VRR-NUC domain-containing protein [Staphylococcus aureus A6224]
gi|282905865|ref|ZP_06313720.1| phi family protein [Staphylococcus aureus subsp. aureus Btn1260]
gi|282919230|ref|ZP_06326965.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
C427]
gi|282927342|ref|ZP_06334960.1| phi protein [Staphylococcus aureus A10102]
gi|284024516|ref|ZP_06378914.1| VRR-NUC domain-containing protein [Staphylococcus aureus subsp.
aureus 132]
gi|295407566|ref|ZP_06817359.1| phage protein [Staphylococcus aureus A8819]
gi|296276323|ref|ZP_06858830.1| VRR-NUC domain-containing protein [Staphylococcus aureus subsp.
aureus MR1]
gi|297207822|ref|ZP_06924256.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
ATCC 51811]
gi|297246596|ref|ZP_06930429.1| phi like protein [Staphylococcus aureus A8796]
gi|18920566|gb|AAL82306.1| phi related protein [Staphylococcus phage phi 12]
gi|62636122|gb|AAX91233.1| ORF044 [Staphylococcus phage 47]
gi|87202814|gb|ABD30624.1| phi related protein [Staphylococcus aureus subsp. aureus NCTC 8325]
gi|147740557|gb|ABQ48855.1| VRR-NUC [Staphylococcus aureus subsp. aureus JH9]
gi|149945994|gb|ABR51930.1| VRR-NUC domain protein [Staphylococcus aureus subsp. aureus JH1]
gi|257843730|gb|EEV68132.1| VRR-NUC domain-containing protein [Staphylococcus aureus A9719]
gi|257849922|gb|EEV73881.1| VRR-NUC domain-containing protein [Staphylococcus aureus A9299]
gi|257857881|gb|EEV80772.1| VRR-NUC domain-containing protein [Staphylococcus aureus A6224]
gi|282317040|gb|EFB47414.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
C427]
gi|282331157|gb|EFB60671.1| phi family protein [Staphylococcus aureus subsp. aureus Btn1260]
gi|282590666|gb|EFB95742.1| phi protein [Staphylococcus aureus A10102]
gi|283469595|emb|CAQ48806.1| phi related protein [Staphylococcus aureus subsp. aureus ST398]
gi|283470736|emb|CAQ49947.1| phi related protein [Staphylococcus aureus subsp. aureus ST398]
gi|294967585|gb|EFG43621.1| phage protein [Staphylococcus aureus A8819]
gi|296887538|gb|EFH26437.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
ATCC 51811]
gi|297176554|gb|EFH35819.1| phi like protein [Staphylococcus aureus A8796]
gi|298693628|gb|ADI96850.1| hypothetical phage protein [Staphylococcus aureus subsp. aureus
ED133]
gi|302333126|gb|ADL23319.1| VRR-NUC domain [Staphylococcus aureus subsp. aureus JKD6159]
gi|312438076|gb|ADQ77147.1| phi phage protein [Staphylococcus aureus subsp. aureus TCH60]
gi|323438428|gb|EGA96183.1| hypothetical protein SAO11_2724 [Staphylococcus aureus O11]
gi|323441316|gb|EGA98981.1| hypothetical protein SAO46_2726 [Staphylococcus aureus O46]
gi|329729402|gb|EGG65807.1| VRR-NUC domain protein [Staphylococcus aureus subsp. aureus 21189]
gi|329730601|gb|EGG66986.1| VRR-NUC domain protein [Staphylococcus aureus subsp. aureus 21193]
Length = 96
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 47/92 (51%)
Query: 11 EKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMS 70
E +EK LV KL+ K G RG PDR+II P G +++E+K+ G+L Q
Sbjct: 3 ESTLEKYLVKEITKLNGLCLKWVAPGTRGVPDRIIIMPEGKTYFVEMKQEKGKLHPLQKY 62
Query: 71 EIEELRRRGQRVKVLVSMEEVDNFLEELACTL 102
+ R +V VL + E+V+ F+ + T
Sbjct: 63 VHRQFENRDHKVYVLWNKEQVNTFIRMVGGTF 94
>gi|300764699|ref|ZP_07074690.1| conserved hypothetical protein [Listeria monocytogenes FSL
N1-017]
gi|300514585|gb|EFK41641.1| conserved hypothetical protein [Listeria monocytogenes FSL
N1-017]
Length = 94
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 48/89 (53%)
Query: 11 EKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMS 70
EK VE+ LV K++ K + G G PDRL++ PNG L ++EVK P + Q+
Sbjct: 3 EKQVEQALVKAVKRVGGICPKFTSPGLAGVPDRLVLMPNGKLGFVEVKAPGKKPRSLQLF 62
Query: 71 EIEELRRRGQRVKVLVSMEEVDNFLEELA 99
+++L G + VL ++++ LE +
Sbjct: 63 RMKQLTDLGFQCFVLDEIDQIPELLERIG 91
>gi|332160955|ref|YP_004297532.1| VRR-NUC domain protein [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|325665185|gb|ADZ41829.1| VRR-NUC domain protein [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|330862110|emb|CBX72274.1| putative protein p44 [Yersinia enterocolitica W22703]
Length = 90
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 42/80 (52%)
Query: 8 YQTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQ 67
Y E +E LV KK+ K GRR PDRL++ P G + ++E K P + +
Sbjct: 3 YNREDSIEDHLVKEVKKVGGIAYKFISPGRRSVPDRLVLLPGGKVIFVECKAPGEKPTAA 62
Query: 68 QMSEIEELRRRGQRVKVLVS 87
Q+ E E+LR G V+VL S
Sbjct: 63 QLREHEKLRALGFTVRVLDS 82
>gi|57234141|ref|YP_181812.1| hypothetical protein DET1097 [Dehalococcoides ethenogenes 195]
gi|57224589|gb|AAW39646.1| conserved hypothetical protein [Dehalococcoides ethenogenes 195]
Length = 95
Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 46/91 (50%)
Query: 11 EKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMS 70
EK +EK+L+ K + K G G PDRL++ P G + + E+K P + Q++
Sbjct: 5 EKTIEKKLINAVKSMGGIAPKFVSPGFDGMPDRLVLLPGGVMAFAELKAPGKKPRPLQLA 64
Query: 71 EIEELRRRGQRVKVLVSMEEVDNFLEELACT 101
LR G +V V+ + ++ L+EL T
Sbjct: 65 RHRLLRELGFKVYVIDDISQIGGMLDELHAT 95
>gi|211731860|gb|ACJ10158.1| conserved hypothetical protein [Bacteriophage APSE-3]
Length = 93
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%)
Query: 11 EKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMS 70
E +EK LV+ +K+ K GRRG PDRL+ PNG + ++E K P + + Q+
Sbjct: 6 EDSIEKHLVSEVQKIGGIAYKFVSPGRRGVPDRLVALPNGKIIFVECKAPGEKPTPYQLR 65
Query: 71 EIEELRRRGQRVKVLVSME 89
E L G +V VL S +
Sbjct: 66 EHARLFALGHQVIVLDSQD 84
>gi|9633591|ref|NP_051005.1| hypothetical protein APSE-1_44 [Acyrthosiphon pisum bacteriophage
APSE-1]
gi|9910954|sp|Q9T1Q4|VP44_BPAPS RecName: Full=Putative nuclease p44
gi|6118039|gb|AAF03987.1|AF157835_44 P44 [Endosymbiont phage APSE-1]
Length = 93
Score = 51.6 bits (122), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%)
Query: 11 EKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMS 70
E +EK LV+ +K+ K GRRG PDRL+ PNG + ++E K P + + Q+
Sbjct: 6 EDSIEKHLVSEVRKIGGIAYKFVSPGRRGVPDRLVALPNGKIIFVECKAPGEKPTPYQLR 65
Query: 71 EIEELRRRGQRVKVLVSME 89
E L G +V VL S +
Sbjct: 66 EHARLFALGHQVIVLDSQD 84
>gi|49483701|ref|YP_040925.1| hypothetical protein SAR1524 [Staphylococcus aureus subsp. aureus
MRSA252]
gi|49485833|ref|YP_043054.1| hypothetical protein SAS0927 [Staphylococcus aureus subsp. aureus
MSSA476]
gi|66395630|ref|YP_239996.1| ORF045 [Staphylococcus phage 3A]
gi|209363582|ref|YP_002268000.1| hypothetical protein phi2958PVL_gp30 [Staphylococcus phage
phi2958PVL]
gi|258445561|ref|ZP_05693743.1| gp33 [Staphylococcus aureus A6300]
gi|258455569|ref|ZP_05703526.1| conserved hypothetical protein [Staphylococcus aureus A5937]
gi|262052906|ref|ZP_06025089.1| hypothetical protein SA930_0247 [Staphylococcus aureus 930918-3]
gi|282921766|ref|ZP_06329483.1| conserved hypothetical protein [Staphylococcus aureus A9765]
gi|295428025|ref|ZP_06820657.1| predicted protein [Staphylococcus aureus subsp. aureus EMRSA16]
gi|297591004|ref|ZP_06949642.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
MN8]
gi|49241830|emb|CAG40522.1| hypothetical phage protein [Staphylococcus aureus subsp. aureus
MRSA252]
gi|49244276|emb|CAG42703.1| hypothetical phage protein [Staphylococcus aureus subsp. aureus
MSSA476]
gi|62635976|gb|AAX91087.1| ORF045 [Staphylococcus phage 3A]
gi|208973083|dbj|BAG74399.1| hypothetical protein [Staphylococcus phage phi2958PVL]
gi|257855608|gb|EEV78541.1| gp33 [Staphylococcus aureus A6300]
gi|257862257|gb|EEV85028.1| conserved hypothetical protein [Staphylococcus aureus A5937]
gi|259159213|gb|EEW44274.1| hypothetical protein SA930_0247 [Staphylococcus aureus 930918-3]
gi|282594028|gb|EFB99017.1| conserved hypothetical protein [Staphylococcus aureus A9765]
gi|295128383|gb|EFG58017.1| predicted protein [Staphylococcus aureus subsp. aureus EMRSA16]
gi|297575890|gb|EFH94606.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
MN8]
gi|315128427|gb|EFT84435.1| hypothetical protein CGSSa03_13292 [Staphylococcus aureus subsp.
aureus CGS03]
Length = 96
Score = 51.6 bits (122), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 46/92 (50%)
Query: 11 EKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMS 70
E +EK LV KL+ K G RG PDR+II P G +++E+K+ G+L Q
Sbjct: 3 ESTLEKYLVKEITKLNGLCLKWVAPGTRGVPDRIIIMPEGKTYFVEMKQEKGKLHPLQKY 62
Query: 71 EIEELRRRGQRVKVLVSMEEVDNFLEELACTL 102
+ R V VL + E+V+ F+ + T
Sbjct: 63 VHRQFENRDHTVYVLWNKEQVNTFIRMVGGTF 94
>gi|29374968|ref|NP_814121.1| hypothetical protein EF0329 [Enterococcus faecalis V583]
gi|29342426|gb|AAO80192.1| conserved hypothetical protein [Enterococcus faecalis V583]
Length = 106
Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Query: 9 QTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQ 68
Q E D+EK LV K++ K + G RG PDR+I+ G ++++E+K+P G+ Q
Sbjct: 2 QIENDIEKYLVRQIKRIGALCYKFTSPGTRGVPDRIILY-QGNVFFVELKRPGGKPRKDQ 60
Query: 69 MSEIEELRRRGQRVKVLVSMEEVDNFL 95
+ IE+ + + V V+ S + VD +
Sbjct: 61 LKIIEKFKEQLIPVFVIDSKQGVDMLI 87
>gi|219855698|ref|YP_002472820.1| hypothetical protein CKR_2355 [Clostridium kluyveri NBRC 12016]
gi|219569422|dbj|BAH07406.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 106
Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 51/94 (54%)
Query: 8 YQTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQ 67
+ EK +EK+LV KK+ K G G PDRL++ P+G + ++E+K P +
Sbjct: 13 FMLEKYIEKKLVAEVKKMGGIAAKFVSPGLDGMPDRLVLLPHGKMAFVELKAPGKKPRLL 72
Query: 68 QMSEIEELRRRGQRVKVLVSMEEVDNFLEELACT 101
Q+ I++L++ G V+ ++++ L E+ +
Sbjct: 73 QIRRIKQLQKLGFACYVIDDVKQIGGILGEIQSS 106
>gi|284007834|emb|CBA73722.1| conserved hypothetical phage protein [Arsenophonus nasoniae]
Length = 93
Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%)
Query: 11 EKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMS 70
E+ +EK LV +K+ K GRRG PDRL+ PNG + ++E K P + + Q+
Sbjct: 6 EESIEKHLVREVQKIGGIAYKFVSPGRRGVPDRLVALPNGNIIFVECKAPGEKPTPYQLR 65
Query: 71 EIEELRRRGQRVKVLVSME 89
E L G +V VL S +
Sbjct: 66 EHARLFALGHQVIVLDSQD 84
>gi|297583089|ref|YP_003698869.1| VRR-NUC domain-containing protein [Bacillus selenitireducens
MLS10]
gi|297141546|gb|ADH98303.1| VRR-NUC domain protein [Bacillus selenitireducens MLS10]
Length = 96
Score = 51.2 bits (121), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 42/86 (48%)
Query: 10 TEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQM 69
TEKD+EK+LV + K G G PDRLI+ P G + ++EVK P RL Q
Sbjct: 2 TEKDIEKQLVVSTRTAGGMAPKLVSPGFDGIPDRLILMPGGRIGFVEVKAPGKRLRPLQE 61
Query: 70 SEIEELRRRGQRVKVLVSMEEVDNFL 95
+L G VL +E++ L
Sbjct: 62 KRKRQLEALGFSAFVLDGVEQIPEIL 87
>gi|293401138|ref|ZP_06645282.1| hypothetical protein HMPREF0863_01422 [Erysipelotrichaceae
bacterium 5_2_54FAA]
gi|291305264|gb|EFE46509.1| hypothetical protein HMPREF0863_01422 [Erysipelotrichaceae
bacterium 5_2_54FAA]
Length = 95
Score = 51.2 bits (121), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 46/91 (50%)
Query: 11 EKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMS 70
EK++E +L T +K K RG PDRL++ P+G ++E+K P Q +
Sbjct: 5 EKNIENKLTTAVEKAGGIAPKFVSPSLRGMPDRLVLLPDGVFAFVELKAPGESPRPLQRA 64
Query: 71 EIEELRRRGQRVKVLVSMEEVDNFLEELACT 101
+LR G +V V+ S++ + L EL T
Sbjct: 65 RHRKLRSLGFKVYVIDSIDGIGGMLHELLST 95
>gi|257428239|ref|ZP_05604637.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
65-1322]
gi|257432447|ref|ZP_05608810.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
E1410]
gi|257275080|gb|EEV06567.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
65-1322]
gi|257283326|gb|EEV13458.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
E1410]
Length = 96
Score = 50.8 bits (120), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 46/92 (50%)
Query: 11 EKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMS 70
E +EK LV KL+ K G RG PDR+II P G +++E+K+ G+L Q
Sbjct: 3 ESTLEKYLVKEITKLNGLCLKWVAPGTRGVPDRIIIMPEGKTFFVEMKQEKGKLHPLQKY 62
Query: 71 EIEELRRRGQRVKVLVSMEEVDNFLEELACTL 102
+ R V VL + E+V+ F+ + T
Sbjct: 63 VHRQFENRDHTVYVLWNKEQVNTFIRMVGGTF 94
>gi|48697220|ref|YP_024950.1| hypothetical protein BcepC6B_gp30 [Burkholderia phage BcepC6B]
gi|47779026|gb|AAT38389.1| gp30 [Burkholderia phage BcepC6B]
Length = 280
Score = 50.8 bits (120), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 46/87 (52%)
Query: 11 EKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMS 70
EK VE LV + K S R PDR++I P ++++E+K+P + + Q+
Sbjct: 18 EKTVETYLVDRVRAAGGDAYKFSSPARVSVPDRIVIFPPARVYFVELKRPGNKPTKGQLR 77
Query: 71 EIEELRRRGQRVKVLVSMEEVDNFLEE 97
E E LR G V+V+ S E VD F+ E
Sbjct: 78 EHERLRALGCDVRVIDSREAVDAFVLE 104
>gi|291556510|emb|CBL33627.1| VRR-NUC domain [Eubacterium siraeum V10Sc8a]
Length = 93
Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 45/88 (51%)
Query: 11 EKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMS 70
EK VE+ LV K K G G PDRL++ P G + ++EVK P Q++
Sbjct: 3 EKIVEQHLVKAVKSSGGIAPKLVSPGFDGMPDRLVLLPGGKIGFVEVKAPGKEPRPLQVA 62
Query: 71 EIEELRRRGQRVKVLVSMEEVDNFLEEL 98
LRR G +V +L +E++ L+E+
Sbjct: 63 RHGLLRRLGFKVYILDDLEQIGGILDEI 90
>gi|226949729|ref|YP_002804820.1| VRR-NUC domain protein [Clostridium botulinum A2 str. Kyoto]
gi|226843509|gb|ACO86175.1| VRR-NUC domain protein [Clostridium botulinum A2 str. Kyoto]
Length = 62
Score = 50.8 bits (120), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 40/59 (67%)
Query: 40 CPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLVSMEEVDNFLEEL 98
PDR+++ P G + ++E+K P + Q I+ELR G RV+++ S+E+++NF+EE+
Sbjct: 1 MPDRIVLLPQGRIVFVELKAPDKKPRPIQKYRIKELRALGFRVEIIDSIEDINNFVEEI 59
>gi|281416461|ref|YP_003347381.1| hypothetical protein [Enterococcus phage phiFL4A]
gi|270209637|gb|ACZ64176.1| conserved hypothetical protein [Enterococcus phage phiFL4A]
Length = 106
Score = 50.4 bits (119), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Query: 9 QTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQ 68
Q E D+EK L+ K+ K + G RG PDR+I+ G ++++E+K+P G+ Q
Sbjct: 2 QIENDIEKYLIRQIKRTGALCYKFTSPGTRGVPDRIILY-QGNVFFVELKRPGGKPRKDQ 60
Query: 69 MSEIEELRRRGQRVKVLVSMEEVDNFL 95
+ IE+ + + V V+ S + VD +
Sbjct: 61 LKIIEKFKEQLIPVFVIDSKQGVDTLI 87
>gi|212499740|ref|YP_002308548.1| hypothetical protein APSE235 [Bacteriophage APSE-2]
gi|238898731|ref|YP_002924412.1| APSE-2 prophage; hypothetical protein [Candidatus Hamiltonella
defensa 5AT (Acyrthosiphon pisum)]
gi|75906054|gb|ABA29400.1| conserved hypothetical protein [Bacteriophage APSE-2]
gi|211731709|gb|ACJ10197.1| conserved hypothetical protein [Bacteriophage APSE-2]
gi|211731854|gb|ACJ10153.1| conserved hypothetical protein [Bacteriophage APSE-4]
gi|229466490|gb|ACQ68264.1| APSE-2 prophage; conserved hypothetical protein [Candidatus
Hamiltonella defensa 5AT (Acyrthosiphon pisum)]
Length = 94
Score = 50.4 bits (119), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 41/79 (51%)
Query: 11 EKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMS 70
E +EK LV +K+ K GRRG PDRL+ PNG + ++E K P + + Q+
Sbjct: 6 EDSIEKHLVREVQKIGGIAYKFVSPGRRGVPDRLVALPNGKIIFVECKAPGEKPTPYQLR 65
Query: 71 EIEELRRRGQRVKVLVSME 89
E L G +V VL S +
Sbjct: 66 EHARLFALGHQVIVLDSQD 84
>gi|325690427|gb|EGD32430.1| VRR-NUC domain protein [Streptococcus sanguinis SK115]
Length = 103
Score = 50.4 bits (119), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 50/91 (54%)
Query: 11 EKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMS 70
E+++E++L +KK K G G PDR+++ P G L ++E+K P R Q+
Sbjct: 3 EREIEEKLRVESKKRGGLAMKFVSPGLVGVPDRIVVLPQGRLGFVELKAPGERPRRIQVR 62
Query: 71 EIEELRRRGQRVKVLVSMEEVDNFLEELACT 101
+E+LR+ G V VL E++ L+++ T
Sbjct: 63 RMEQLRKLGFLVYVLDDKEKIGEILDDIQGT 93
>gi|211731845|gb|ACJ10148.1| conserved hypothetical protein [Bacteriophage APSE-5]
Length = 93
Score = 50.4 bits (119), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 41/79 (51%)
Query: 11 EKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMS 70
E +EK LV +K+ K GRRG PDRL+ PNG + ++E K P + + Q+
Sbjct: 6 EDSIEKHLVREVQKIGGIAYKFVSPGRRGVPDRLVALPNGKIIFVECKAPGEKPTPYQLR 65
Query: 71 EIEELRRRGQRVKVLVSME 89
E L G +V VL S +
Sbjct: 66 EHARLFALGHQVIVLDSQD 84
>gi|257088836|ref|ZP_05583197.1| predicted protein [Enterococcus faecalis CH188]
gi|256997648|gb|EEU84168.1| predicted protein [Enterococcus faecalis CH188]
Length = 132
Score = 50.4 bits (119), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Query: 9 QTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQ 68
Q E D+EK L+ K+ K + G RG PDR+I+ G ++++E+K+P G+ Q
Sbjct: 28 QIENDIEKYLIRQIKRTGALCYKFTSPGTRGVPDRIILY-QGNVFFVELKRPGGKPRKDQ 86
Query: 69 MSEIEELRRRGQRVKVLVSMEEVDNFL 95
+ IE+ + + V V+ S + VD +
Sbjct: 87 LKIIEKFKEQLIPVFVIDSKQGVDTLI 113
>gi|66395557|ref|YP_239929.1| ORF053 [Staphylococcus phage 42E]
gi|215401141|ref|YP_002332396.1| hypothetical protein SauSIPLA35_gp33 [Staphylococcus phage
phiSauS-IPLA35]
gi|62636050|gb|AAX91161.1| ORF053 [Staphylococcus phage 42E]
gi|215260492|gb|ACJ64622.1| gp33 [Staphylococcus phage phiSauS-IPLA35]
Length = 96
Score = 50.4 bits (119), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 44/85 (51%)
Query: 11 EKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMS 70
E +EK LV KL+ K G RG PDR+II P G +++E+K+ G+L Q
Sbjct: 3 ESTLEKYLVKEITKLNGLCLKWVAPGTRGVPDRIIIMPEGKTYFVEMKQEKGKLHPLQKY 62
Query: 71 EIEELRRRGQRVKVLVSMEEVDNFL 95
+ R V VL + E+V+ F+
Sbjct: 63 VHRQFENRDHTVYVLWNKEQVNTFI 87
>gi|323693307|ref|ZP_08107525.1| VRR-NUC domain-containing protein [Clostridium symbiosum
WAL-14673]
gi|323502790|gb|EGB18634.1| VRR-NUC domain-containing protein [Clostridium symbiosum
WAL-14673]
Length = 93
Score = 50.4 bits (119), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 44/88 (50%)
Query: 11 EKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMS 70
EK +EK+L T KK K G PDR+I+ P+G + E+K P Q +
Sbjct: 3 EKTIEKKLTTAVKKAGGIAPKFVSPSFAGMPDRIILLPDGKFAFAELKAPGESPRPLQKA 62
Query: 71 EIEELRRRGQRVKVLVSMEEVDNFLEEL 98
LR G RV V+ S+E++ ++EL
Sbjct: 63 RHRLLRSLGFRVYVIDSIEQIGGMIDEL 90
>gi|253581728|ref|ZP_04858952.1| conserved hypothetical protein [Fusobacterium varium ATCC 27725]
gi|251836077|gb|EES64614.1| conserved hypothetical protein [Fusobacterium varium ATCC 27725]
Length = 97
Score = 50.4 bits (119), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 50/88 (56%)
Query: 11 EKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMS 70
EK++EK L KKL K + G G PDRL++ P G + ++E+K P G+ + Q
Sbjct: 3 EKEIEKYLREEIKKLGGIAYKFTSPGNSGVPDRLVLLPCGVVAFVELKAPGGKTTAIQDR 62
Query: 71 EIEELRRRGQRVKVLVSMEEVDNFLEEL 98
+I +++ V ++ S +VD F++++
Sbjct: 63 QIARIQKLDFDVYIVDSKFKVDCFIQDM 90
>gi|227520160|ref|ZP_03950209.1| VRR-NUC domain protein [Enterococcus faecalis TX0104]
gi|227072405|gb|EEI10368.1| VRR-NUC domain protein [Enterococcus faecalis TX0104]
gi|315160594|gb|EFU04611.1| VRR-NUC domain protein [Enterococcus faecalis TX0645]
gi|315574063|gb|EFU86254.1| VRR-NUC domain protein [Enterococcus faecalis TX0309B]
gi|315579440|gb|EFU91631.1| VRR-NUC domain protein [Enterococcus faecalis TX0630]
gi|315582008|gb|EFU94199.1| VRR-NUC domain protein [Enterococcus faecalis TX0309A]
Length = 127
Score = 50.1 bits (118), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Query: 9 QTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQ 68
Q E D+EK L+ K+ K + G RG PDR+I+ G ++++E+K+P G+ Q
Sbjct: 23 QIENDIEKYLIRQIKRTGALCYKFTSPGTRGVPDRIILY-QGNVFFVELKRPGGKPRKDQ 81
Query: 69 MSEIEELRRRGQRVKVLVSMEEVDNFL 95
+ IE+ + + V V+ S + VD +
Sbjct: 82 LKIIEKFKEQLIPVFVIDSKQGVDTLI 108
>gi|153955275|ref|YP_001396040.1| hypothetical protein CKL_2657 [Clostridium kluyveri DSM 555]
gi|146348133|gb|EDK34669.1| Phage-related protein [Clostridium kluyveri DSM 555]
Length = 93
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 50/91 (54%)
Query: 11 EKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMS 70
EK +EK+LV KK+ K G G PDRL++ P+G + ++E+K P + Q+
Sbjct: 3 EKYIEKKLVAEVKKMGGIAAKFVSPGLDGMPDRLVLLPHGKMAFVELKAPGKKPRLLQIR 62
Query: 71 EIEELRRRGQRVKVLVSMEEVDNFLEELACT 101
I++L++ G V+ ++++ L E+ +
Sbjct: 63 RIKQLQKLGFACYVIDDVKQIGGILGEIQSS 93
>gi|42779466|ref|NP_976713.1| phage protein, putative [Bacillus cereus ATCC 10987]
gi|42735382|gb|AAS39321.1| phage protein, putative [Bacillus cereus ATCC 10987]
Length = 93
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 50/91 (54%)
Query: 11 EKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMS 70
EK +EK+LV KK++ K G G PDR+++ P+G + +IE+K P + Q+
Sbjct: 3 EKYIEKKLVAEVKKMEGIAAKFVSPGLDGMPDRIVLLPHGKMAFIELKAPGKKPRPLQIR 62
Query: 71 EIEELRRRGQRVKVLVSMEEVDNFLEELACT 101
I +L++ G V+ ++++ L E+ +
Sbjct: 63 RIRQLQKLGFTCYVIDDVKQIGGVLGEIQSS 93
>gi|303239098|ref|ZP_07325628.1| VRR-NUC domain protein [Acetivibrio cellulolyticus CD2]
gi|302593436|gb|EFL63154.1| VRR-NUC domain protein [Acetivibrio cellulolyticus CD2]
Length = 138
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 47/89 (52%)
Query: 11 EKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMS 70
EK++EK+L T K + K G G PDR+++ PNG +++ E+K+ +L Q
Sbjct: 49 EKELEKKLRTAVKAIGGLALKFVSPGMAGVPDRMVLLPNGRIYFSELKRHGEKLRPLQQK 108
Query: 71 EIEELRRRGQRVKVLVSMEEVDNFLEELA 99
++L G +V + S ++ FL E+
Sbjct: 109 RKQQLEMLGFKVYCIDSASSLEGFLREVG 137
>gi|331085753|ref|ZP_08334836.1| hypothetical protein HMPREF0987_01139 [Lachnospiraceae bacterium
9_1_43BFAA]
gi|330406676|gb|EGG86181.1| hypothetical protein HMPREF0987_01139 [Lachnospiraceae bacterium
9_1_43BFAA]
Length = 94
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 45/89 (50%)
Query: 10 TEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQM 69
+EK +E++L T KK+ W K S G G PDRL++ P G L ++E+K P ++ Q
Sbjct: 3 SEKSIEQKLRTETKKMGGWAVKFSSPGLDGMPDRLVLFPGGKLGFVELKAPGKKMRPLQE 62
Query: 70 SEIEELRRRGQRVKVLVSMEEVDNFLEEL 98
L G V + S E + L E+
Sbjct: 63 KRKRTLEELGFLVFCVDSKEMIGGVLHEI 91
>gi|220930214|ref|YP_002507123.1| VRR-NUC domain protein [Clostridium cellulolyticum H10]
gi|220000542|gb|ACL77143.1| VRR-NUC domain protein [Clostridium cellulolyticum H10]
Length = 93
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 50/91 (54%)
Query: 11 EKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMS 70
EK +EK+LV KK+ K G G PDRL++ P+G + ++E+K P + Q+
Sbjct: 3 EKYIEKKLVAEVKKMGGIAAKFVSPGLDGMPDRLVLLPHGKMAFVELKAPGKKPRLLQIR 62
Query: 71 EIEELRRRGQRVKVLVSMEEVDNFLEELACT 101
I++L++ G V+ ++++ L E+ +
Sbjct: 63 RIKQLQKLGFTCYVIDDVKQIGGVLGEIQSS 93
>gi|317501094|ref|ZP_07959300.1| VRR-NUC domain-containing protein [Lachnospiraceae bacterium
8_1_57FAA]
gi|316897481|gb|EFV19546.1| VRR-NUC domain-containing protein [Lachnospiraceae bacterium
8_1_57FAA]
Length = 93
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 43/91 (47%)
Query: 11 EKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMS 70
EK +E +L KK K G PDRLI+ P+G + + E+K P + Q+S
Sbjct: 3 EKQIENKLTMAVKKNGGIALKLVCPSFAGMPDRLILLPDGHIGFAELKAPGKKPRPLQLS 62
Query: 71 EIEELRRRGQRVKVLVSMEEVDNFLEELACT 101
LR G RV V+ E++ + EL T
Sbjct: 63 RHRLLRELGYRVYVIDDPEQIGGMINELQST 93
>gi|295096882|emb|CBK85972.1| VRR-NUC domain [Enterobacter cloacae subsp. cloacae NCTC 9394]
Length = 91
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 39/80 (48%)
Query: 8 YQTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQ 67
Y+ E +EK LV KK K GRR PDR+++ P G L ++E K P
Sbjct: 3 YERESLIEKHLVAEVKKAGGVAYKFVSPGRRSVPDRIVLLPGGRLVFVECKAPGKPPRAD 62
Query: 68 QMSEIEELRRRGQRVKVLVS 87
Q+ E E LR G V VL S
Sbjct: 63 QLREHERLRALGFTVVVLDS 82
>gi|313898077|ref|ZP_07831616.1| VRR-NUC domain protein [Clostridium sp. HGF2]
gi|312957105|gb|EFR38734.1| VRR-NUC domain protein [Clostridium sp. HGF2]
Length = 93
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 43/88 (48%)
Query: 11 EKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMS 70
EK +EK+L T KK K G PDRLI+ P+G + E+K P Q +
Sbjct: 3 EKTIEKKLTTAVKKAGGIAPKFVSPSFAGMPDRLILLPDGKFAFAELKAPGESPRPLQKA 62
Query: 71 EIEELRRRGQRVKVLVSMEEVDNFLEEL 98
L G RV V+ S+E++ ++EL
Sbjct: 63 RHRLLHSLGFRVYVIDSVEQIGGMIDEL 90
>gi|227498326|ref|ZP_03928476.1| diacylglycerol kinase [Acidaminococcus sp. D21]
gi|226903788|gb|EEH89706.1| diacylglycerol kinase [Acidaminococcus sp. D21]
Length = 102
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 47/91 (51%)
Query: 11 EKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMS 70
EK++E LV +K K G PDRL++ +G + ++EVK P + Q+
Sbjct: 3 EKEIEHNLVMETRKAGGMAVKFVSPSFSGMPDRLVLLGDGKIGFVEVKAPGQKPRPLQLK 62
Query: 71 EIEELRRRGQRVKVLVSMEEVDNFLEELACT 101
LRR G +V VL +ME++ L+ +A T
Sbjct: 63 RHAMLRRLGYQVFVLDAMEDIPAVLKAIAHT 93
>gi|191174025|ref|ZP_03035542.1| VRR_NUC domain protein [Escherichia coli F11]
gi|190905716|gb|EDV65338.1| VRR_NUC domain protein [Escherichia coli F11]
gi|324014346|gb|EGB83565.1| VRR-NUC domain protein [Escherichia coli MS 60-1]
Length = 98
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 40/80 (50%)
Query: 8 YQTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQ 67
Y+ E +EK LV KK K GRR PDR+++ P G + ++E K P+
Sbjct: 4 YERESLIEKHLVAEVKKAGGVAFKFVSPGRRSVPDRIVLLPGGRIVFVECKAPSKPPRPD 63
Query: 68 QMSEIEELRRRGQRVKVLVS 87
Q+ E E LR G V VL S
Sbjct: 64 QLREHERLRALGFTVVVLDS 83
>gi|256617083|ref|ZP_05473929.1| conserved hypothetical protein [Enterococcus faecalis ATCC 4200]
gi|257088354|ref|ZP_05582715.1| conserved hypothetical protein [Enterococcus faecalis D6]
gi|256596610|gb|EEU15786.1| conserved hypothetical protein [Enterococcus faecalis ATCC 4200]
gi|256996384|gb|EEU83686.1| conserved hypothetical protein [Enterococcus faecalis D6]
Length = 95
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 45/89 (50%)
Query: 11 EKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMS 70
EK VE+ LV K K G G PDRL++ PNG + ++EVK P + Q+
Sbjct: 3 EKQVEQALVKAVKARGGICPKFVSPGLSGVPDRLVLMPNGKIAFVEVKAPKKKPRALQLY 62
Query: 71 EIEELRRRGQRVKVLVSMEEVDNFLEELA 99
+++L G + VL +E++ + E+
Sbjct: 63 RMKQLTDLGFKCFVLDEVEQIPALIGEIG 91
>gi|304439203|ref|ZP_07399121.1| VRR-NUC domain protein [Peptoniphilus duerdenii ATCC BAA-1640]
gi|304372335|gb|EFM25923.1| VRR-NUC domain protein [Peptoniphilus duerdenii ATCC BAA-1640]
Length = 93
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 44/89 (49%)
Query: 11 EKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMS 70
E ++EK LV K K + + G PDR+I+ P G + ++E K+P G Q
Sbjct: 3 ENEIEKALVDKVKLHGGLCLKFTSLSMTGIPDRIILLPKGKVGFVETKRPGGEPRPIQKK 62
Query: 71 EIEELRRRGQRVKVLVSMEEVDNFLEELA 99
I + + G +V VL S E +D ++ +
Sbjct: 63 RIRQFKNLGFKVYVLDSKENIDEIIKRIG 91
>gi|306826831|ref|ZP_07460131.1| VRR-NUC domain protein [Streptococcus pyogenes ATCC 10782]
gi|304430849|gb|EFM33858.1| VRR-NUC domain protein [Streptococcus pyogenes ATCC 10782]
Length = 91
Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 51/90 (56%), Gaps = 4/90 (4%)
Query: 9 QTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQ 68
+TEKD+E L KK K + G G PDR+++ N G++++EVK P + Q
Sbjct: 2 RTEKDIENYL---KKKTKGLCLKFTSPGTIGVPDRIVVM-NTGIFFVEVKAPDKKPRPSQ 57
Query: 69 MSEIEELRRRGQRVKVLVSMEEVDNFLEEL 98
++ ++++ GQ V V+ S E VD L+E+
Sbjct: 58 VAMHKKIKEAGQHVWVVDSYESVDIALKEM 87
>gi|167757892|ref|ZP_02430019.1| hypothetical protein CLOSCI_00223 [Clostridium scindens ATCC 35704]
gi|167664546|gb|EDS08676.1| hypothetical protein CLOSCI_00223 [Clostridium scindens ATCC 35704]
Length = 120
Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 48/89 (53%)
Query: 11 EKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMS 70
EK +E++LV +K K + G G PDRL++ P+G + + E+K P R Q +
Sbjct: 28 EKQIEQKLVREVRKRGGICPKFTSPGFAGMPDRLLLLPHGRMAFAELKAPGCRPRPLQEA 87
Query: 71 EIEELRRRGQRVKVLVSMEEVDNFLEELA 99
+ L R G RV V+ S E+++ + E+
Sbjct: 88 RHKLLARLGFRVYVIDSPEQIEKIMAEMG 116
>gi|218133419|ref|ZP_03462223.1| hypothetical protein BACPEC_01284 [Bacteroides pectinophilus ATCC
43243]
gi|217990794|gb|EEC56800.1| hypothetical protein BACPEC_01284 [Bacteroides pectinophilus ATCC
43243]
Length = 93
Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 46/91 (50%)
Query: 11 EKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMS 70
E VE+ L AKK K G G PDR+++ P+G + ++E+K P + Q+
Sbjct: 3 ESTVERHLREEAKKRKGMALKFVSPGMNGVPDRIVLMPDGKMAFVELKAPGKKPRPLQLK 62
Query: 71 EIEELRRRGQRVKVLVSMEEVDNFLEELACT 101
L R G V V+ ++E++ L+E+ T
Sbjct: 63 RKRMLERLGFPVYVVDNIEQIGGILDEIQST 93
>gi|325478671|gb|EGC81782.1| VRR-NUC domain protein [Anaerococcus prevotii ACS-065-V-Col13]
Length = 93
Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 42/89 (47%)
Query: 11 EKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMS 70
E ++EK LV K K + G PDR+I+ P G + ++E K+P G Q
Sbjct: 3 ENEIEKALVDKVKPHGGLCLKFTSPSMTGIPDRIILLPKGKIGFVETKRPGGEPRPIQKR 62
Query: 71 EIEELRRRGQRVKVLVSMEEVDNFLEELA 99
I + + G +V VL S E +D + +
Sbjct: 63 RIRQFKNLGFKVYVLDSKENIDEIINRIG 91
>gi|21910977|ref|NP_665245.1| hypothetical protein SpyM3_1441 [Streptococcus pyogenes MGAS315]
gi|28876471|ref|NP_795677.1| hypothetical protein SpyM3_1441 [Streptococcus pyogenes phage
315.6]
gi|28895336|ref|NP_801686.1| hypothetical protein SPs0424 [Streptococcus pyogenes SSI-1]
gi|139473886|ref|YP_001128602.1| hypothetical protein SpyM51053 [Streptococcus pyogenes str.
Manfredo]
gi|21905185|gb|AAM80048.1| conserved hypothetical protein - phage-associated [Streptococcus
pyogenes MGAS315]
gi|28810582|dbj|BAC63519.1| hypothetical protein [Streptococcus pyogenes SSI-1]
gi|134272133|emb|CAM30378.1| hypothetical phage protein [Streptococcus pyogenes str. Manfredo]
Length = 91
Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 51/90 (56%), Gaps = 4/90 (4%)
Query: 9 QTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQ 68
+TEKD+E L KK K + G G PDR+++ N G +++EVK P + Q
Sbjct: 2 RTEKDIENYL---KKKTKGLCLKFASPGTIGVPDRIVVM-NTGTFFVEVKAPGKKPRPSQ 57
Query: 69 MSEIEELRRRGQRVKVLVSMEEVDNFLEEL 98
++ +++++ GQ V V+ S E VD L+E+
Sbjct: 58 VAMHKKIKKAGQHVWVVDSYESVDIALKEM 87
>gi|325662085|ref|ZP_08150704.1| hypothetical protein HMPREF0490_01442 [Lachnospiraceae bacterium
4_1_37FAA]
gi|325471748|gb|EGC74967.1| hypothetical protein HMPREF0490_01442 [Lachnospiraceae bacterium
4_1_37FAA]
Length = 96
Score = 47.8 bits (112), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
Query: 11 EKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMS 70
E++VEK+L+ KK K G G PDR++I P+G + ++EVK+P + Q+
Sbjct: 7 EREVEKQLIDEVKKRGGLCEKW-ISGTVGWPDRIVIIPDGKIGFVEVKRPGEKPRPIQVH 65
Query: 71 EIEELRRRGQRVKVLVSMEEVDNFLEELACT 101
+LR+ G +V VL +++ L +L T
Sbjct: 66 RHNQLRQIGVKVYVLDHQDKIGGILNDLQST 96
>gi|209559300|ref|YP_002285772.1| hypothetical protein Spy49_0764 [Streptococcus phage NZ131.2]
gi|209540501|gb|ACI61077.1| hypothetical protein Spy49_0764 [Streptococcus phage NZ131.2]
Length = 97
Score = 47.8 bits (112), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 51/90 (56%), Gaps = 4/90 (4%)
Query: 9 QTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQ 68
+TEKD+E L KK K + G G PDR+++ N G +++EVK P + Q
Sbjct: 8 RTEKDIENYL---KKKTKGLCLKFASPGTIGVPDRIVVM-NTGTFFVEVKAPGKKPRPSQ 63
Query: 69 MSEIEELRRRGQRVKVLVSMEEVDNFLEEL 98
++ +++++ GQ V V+ S E VD L+E+
Sbjct: 64 VAMHKKIKKAGQHVWVVDSYESVDIALKEM 93
>gi|50913382|ref|YP_059354.1| hypothetical protein M6_Spy0036 [Streptococcus pyogenes
MGAS10394]
gi|50902456|gb|AAT86171.1| Phage-related protein [Streptococcus pyogenes MGAS10394]
Length = 97
Score = 47.4 bits (111), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 51/90 (56%), Gaps = 4/90 (4%)
Query: 9 QTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQ 68
+TEKD+E L KK K + G G PDR+++ N G +++EVK P + Q
Sbjct: 8 RTEKDIENYL---KKKTKGLCLKFASPGTIGVPDRIVVM-NTGTFFVEVKAPGKKPRPSQ 63
Query: 69 MSEIEELRRRGQRVKVLVSMEEVDNFLEEL 98
++ +++++ GQ V V+ S E VD L+E+
Sbjct: 64 VAMHKKIKKAGQHVWVVDSYESVDIALKEM 93
>gi|170023448|ref|YP_001719953.1| VRR-NUC domain-containing protein [Yersinia pseudotuberculosis
YPIII]
gi|169749982|gb|ACA67500.1| VRR-NUC domain protein [Yersinia pseudotuberculosis YPIII]
Length = 89
Score = 47.4 bits (111), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 41/82 (50%)
Query: 8 YQTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQ 67
Y E +E LV KK K GRR PDRL++ P G + ++E K P + +
Sbjct: 3 YIREDSIEAHLVKEVKKAGGIAYKFISPGRRSVPDRLVLLPGGNVIFVECKAPGEKPTAA 62
Query: 68 QMSEIEELRRRGQRVKVLVSME 89
Q+ E E++R G V VL S +
Sbjct: 63 QLREHEKIRALGFAVWVLDSKD 84
>gi|331648303|ref|ZP_08349392.1| putative protein p44 [Escherichia coli M605]
gi|331042852|gb|EGI14993.1| putative protein p44 [Escherichia coli M605]
Length = 98
Score = 47.4 bits (111), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 39/80 (48%)
Query: 8 YQTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQ 67
Y+ E +EK LV KK K GRR PDR+++ P G + ++E K P
Sbjct: 4 YERESLIEKHLVAEVKKAGGVAFKFVSPGRRSVPDRIVLLPGGRIVFVECKAPGKPPRPD 63
Query: 68 QMSEIEELRRRGQRVKVLVS 87
Q+ E E LR G V VL S
Sbjct: 64 QLREHERLRALGFTVVVLDS 83
>gi|167746057|ref|ZP_02418184.1| hypothetical protein ANACAC_00752 [Anaerostipes caccae DSM 14662]
gi|167654572|gb|EDR98701.1| hypothetical protein ANACAC_00752 [Anaerostipes caccae DSM 14662]
Length = 93
Score = 47.4 bits (111), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 45/91 (49%)
Query: 11 EKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMS 70
EK++EKRLV KK K G G PDR+I+ P G + + E+K P + Q +
Sbjct: 3 EKEIEKRLVAEVKKNGGICPKFVSPGYAGMPDRIILLPKGKIAFAELKAPGQKPRPLQAA 62
Query: 71 EIEELRRRGQRVKVLVSMEEVDNFLEELACT 101
+ L G RV V+ E++ + E+ T
Sbjct: 63 RHKILMGLGFRVYVIDGTEQIGGVIREIQST 93
>gi|291283831|ref|YP_003500649.1| Phage associated protein [Escherichia coli O55:H7 str. CB9615]
gi|290763704|gb|ADD57665.1| Phage associated protein [Escherichia coli O55:H7 str. CB9615]
Length = 89
Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 39/80 (48%)
Query: 8 YQTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQ 67
Y+ E +EK LV KK K RR PDR+++ P G L ++E K P
Sbjct: 3 YERENLIEKHLVAEVKKAGGVAFKFISPSRRSVPDRIVLLPGGRLVFVECKSPGKPPRPD 62
Query: 68 QMSEIEELRRRGQRVKVLVS 87
Q+ E E LR+ G V VL S
Sbjct: 63 QLREHERLRKLGFTVVVLDS 82
>gi|94989080|ref|YP_597181.1| hypothetical protein MGAS9429_Spy1450 [Streptococcus pyogenes
MGAS9429]
gi|94542588|gb|ABF32637.1| phage-related protein [Streptococcus pyogenes MGAS9429]
Length = 97
Score = 47.0 bits (110), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 50/91 (54%), Gaps = 4/91 (4%)
Query: 9 QTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQ 68
+TEKD+E L KK K + G G PDR+++ N G +++EVK P + Q
Sbjct: 8 RTEKDIENYL---KKKTKGLCLKFTSPGTIGVPDRIVVM-NTGTFFVEVKAPGKKPRPSQ 63
Query: 69 MSEIEELRRRGQRVKVLVSMEEVDNFLEELA 99
++ ++++ GQ V V+ S E VD L+E+
Sbjct: 64 VAMHKKIKEAGQHVWVVDSYESVDMALKEMG 94
>gi|188494825|ref|ZP_03002095.1| phage associated protein [Escherichia coli 53638]
gi|188490024|gb|EDU65127.1| phage associated protein [Escherichia coli 53638]
gi|323173127|gb|EFZ58758.1| VRR-NUC domain protein [Escherichia coli LT-68]
gi|332088067|gb|EGI93192.1| VRR-NUC domain protein [Shigella boydii 5216-82]
Length = 98
Score = 47.0 bits (110), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 39/80 (48%)
Query: 8 YQTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQ 67
Y+ E +EK LV KK K G R PDR+++ P G + ++E K P
Sbjct: 12 YERESLIEKHLVAEVKKAGGVAFKFVSPGHRSVPDRIVLLPGGRIVFVECKSPGKPPRPD 71
Query: 68 QMSEIEELRRRGQRVKVLVS 87
Q+ E E LR+ G V VL S
Sbjct: 72 QLREHERLRKLGFTVVVLDS 91
>gi|204927408|ref|ZP_03218610.1| VRR-NUC domain protein [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
gi|204324073|gb|EDZ09268.1| VRR-NUC domain protein [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
Length = 89
Score = 47.0 bits (110), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 38/80 (47%)
Query: 8 YQTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQ 67
Y+ E +EK LV KK K GRR PDR+++ P G L ++E K P
Sbjct: 3 YERESIIEKHLVAEVKKAGGVAFKFVSPGRRSVPDRIVLLPGGRLVFVECKAPGKAPRAD 62
Query: 68 QMSEIEELRRRGQRVKVLVS 87
Q E E LR G V VL S
Sbjct: 63 QGREHERLRALGFTVVVLDS 82
>gi|331654017|ref|ZP_08355018.1| putative protein p44 [Escherichia coli M718]
gi|331048866|gb|EGI20942.1| putative protein p44 [Escherichia coli M718]
Length = 98
Score = 47.0 bits (110), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 39/80 (48%)
Query: 8 YQTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQ 67
Y+ E +EK LV KK K G R PDR+++ P G + ++E K P
Sbjct: 12 YERESLIEKHLVAEVKKAGGVAFKFVSPGHRSVPDRIVLLPGGRIVFVECKSPGKPPRPD 71
Query: 68 QMSEIEELRRRGQRVKVLVS 87
Q+ E E LR+ G V VL S
Sbjct: 72 QLREHERLRKLGFTVVVLDS 91
>gi|71911261|ref|YP_282811.1| hypothetical protein M5005_Spy_1448 [Streptococcus pyogenes
MGAS5005]
gi|157311153|ref|YP_001469198.1| hypothetical protein P9_gp18 [Streptococcus phage P9]
gi|71854043|gb|AAZ52066.1| phage-related protein [Streptococcus pyogenes MGAS5005]
gi|119104302|gb|ABL61047.1| hypothetical protein [Streptococcus phage P9]
Length = 91
Score = 47.0 bits (110), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 50/90 (55%), Gaps = 4/90 (4%)
Query: 9 QTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQ 68
+TEKD+E L KK K + G G PDR+++ N G +++EVK P + Q
Sbjct: 2 RTEKDIENYL---KKKTKGLCLKFTSPGTIGVPDRIVVM-NTGTFFVEVKAPGKKPRPSQ 57
Query: 69 MSEIEELRRRGQRVKVLVSMEEVDNFLEEL 98
++ ++++ GQ V V+ S E VD L+E+
Sbjct: 58 VAMHKKIKEAGQHVWVVDSYESVDMALKEM 87
>gi|94992971|ref|YP_601070.1| hypothetical protein MGAS2096_Spy1474 [Streptococcus pyogenes
MGAS2096]
gi|94546479|gb|ABF36526.1| phage-related protein [Streptococcus pyogenes MGAS2096]
Length = 97
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 50/90 (55%), Gaps = 4/90 (4%)
Query: 9 QTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQ 68
+TEKD+E L KK K + G G PDR+++ N G +++EVK P + Q
Sbjct: 8 RTEKDIENYL---KKKTKGLCLKFTSPGTIGVPDRIVVM-NTGTFFVEVKAPGKKPRPSQ 63
Query: 69 MSEIEELRRRGQRVKVLVSMEEVDNFLEEL 98
++ ++++ GQ V V+ S E VD L+E+
Sbjct: 64 VAMHKKIKEAGQHVWVVDSYESVDMALKEM 93
>gi|320530607|ref|ZP_08031659.1| VRR-NUC domain protein [Selenomonas artemidis F0399]
gi|320137134|gb|EFW29064.1| VRR-NUC domain protein [Selenomonas artemidis F0399]
Length = 123
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 42/91 (46%)
Query: 6 FHYQTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLS 65
H E +E+ V KK K GR G PDR+++ P G + E+K P +L
Sbjct: 16 LHIDHESWIEQAFVREVKKRGGLALKFVSPGRVGVPDRIVLIPGGRCVFAEIKAPGKKLR 75
Query: 66 HQQMSEIEELRRRGQRVKVLVSMEEVDNFLE 96
Q++ + G V V+ S+EEV F E
Sbjct: 76 KLQIAAHRVIHGFGLEVSVVSSLEEVKTFCE 106
>gi|295319701|gb|ADG00079.1| VRR-NUC domain protein [Clostridium botulinum F str. 230613]
Length = 62
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 37/57 (64%)
Query: 40 CPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLVSMEEVDNFLE 96
PDR+++ P G + ++E+K P + Q I+ELR G RV+++ S+E ++NF+E
Sbjct: 1 MPDRIVLLPEGRIIFVELKAPGKKPRPIQKYRIKELRSLGFRVEIIDSIERINNFVE 57
>gi|313896465|ref|ZP_07830016.1| VRR-NUC domain protein [Selenomonas sp. oral taxon 137 str.
F0430]
gi|312974889|gb|EFR40353.1| VRR-NUC domain protein [Selenomonas sp. oral taxon 137 str.
F0430]
Length = 93
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 50/88 (56%)
Query: 11 EKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMS 70
E+ +E++L K + K + G G PDRL++ P G + ++E+K P + Q++
Sbjct: 3 ERTIEQKLAARVKAMGGIAPKFTSPGFDGMPDRLVLLPGGRMGFVELKTPGKKPRALQLA 62
Query: 71 EIEELRRRGQRVKVLVSMEEVDNFLEEL 98
LRR G +V V+ +E++D+ LEE+
Sbjct: 63 RHRLLRRLGFKVYVIDGIEQIDSVLEEI 90
>gi|225871339|ref|YP_002747286.1| phage protein [Streptococcus equi subsp. equi 4047]
gi|225700743|emb|CAW95384.1| hypothetical phage protein [Streptococcus equi subsp. equi 4047]
Length = 91
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 50/90 (55%), Gaps = 4/90 (4%)
Query: 9 QTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQ 68
+TEKD+E L KK K + G G PDR+++ N G +++EVK P + Q
Sbjct: 2 RTEKDIENYL---KKKTKGLCLKFASPGTIGVPDRIVVM-NTGTFFVEVKAPGKKPRPSQ 57
Query: 69 MSEIEELRRRGQRVKVLVSMEEVDNFLEEL 98
++ ++++ GQ V V+ S E VD L+E+
Sbjct: 58 VAMHKKIKEAGQHVWVVDSYESVDIALKEM 87
>gi|160935261|ref|ZP_02082644.1| hypothetical protein CLOBOL_00157 [Clostridium bolteae ATCC
BAA-613]
gi|158441992|gb|EDP19689.1| hypothetical protein CLOBOL_00157 [Clostridium bolteae ATCC
BAA-613]
Length = 97
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 49/92 (53%)
Query: 11 EKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMS 70
EKD+E L +K+ K G G PDR+ I P+G +W++E+K+ G+++ Q
Sbjct: 3 EKDIEDWLNKQIEKMGGLAFKFVSPGNPGVPDRIYILPDGRVWFVELKQQLGKVARIQKW 62
Query: 71 EIEELRRRGQRVKVLVSMEEVDNFLEELACTL 102
+ E L R G +++ M++ ++ E+ L
Sbjct: 63 QRERLIRLGCNYRLVKGMDDARAYVGEMRDAL 94
>gi|262043425|ref|ZP_06016550.1| hypothetical protein HMPREF0484_3568 [Klebsiella pneumoniae
subsp. rhinoscleromatis ATCC 13884]
gi|259039251|gb|EEW40397.1| hypothetical protein HMPREF0484_3568 [Klebsiella pneumoniae
subsp. rhinoscleromatis ATCC 13884]
Length = 89
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 38/80 (47%)
Query: 8 YQTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQ 67
Y+ E +EK L K + K GRR PDR+++ P G + ++E K P
Sbjct: 3 YERESIIEKHLTATVKAVGGIAYKFVSPGRRSVPDRIVLLPGGRIVFVECKTPGKAPRAD 62
Query: 68 QMSEIEELRRRGQRVKVLVS 87
Q+ E E LR G V VL S
Sbjct: 63 QLREHERLRALGFNVVVLDS 82
>gi|154504836|ref|ZP_02041574.1| hypothetical protein RUMGNA_02346 [Ruminococcus gnavus ATCC 29149]
gi|153794719|gb|EDN77139.1| hypothetical protein RUMGNA_02346 [Ruminococcus gnavus ATCC 29149]
Length = 93
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 46/91 (50%)
Query: 11 EKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMS 70
E VE+ L A+K K G G PDR+++ P+G + ++E+K P + Q+
Sbjct: 3 ESTVERHLREEARKRKGMALKFVSPGMNGVPDRIVLMPDGKMAFVELKAPGKKPRPLQLK 62
Query: 71 EIEELRRRGQRVKVLVSMEEVDNFLEELACT 101
L R G V V+ ++E++ L+E+ T
Sbjct: 63 RKRMLERLGFPVYVVDNIEQIGGILDEIQST 93
>gi|77412070|ref|ZP_00788396.1| P44 [Streptococcus agalactiae CJB111]
gi|77161875|gb|EAO72860.1| P44 [Streptococcus agalactiae CJB111]
Length = 109
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 46/91 (50%)
Query: 11 EKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMS 70
EK VE++LV+ KK K G PDRL+ P G +EVK P G+ Q++
Sbjct: 19 EKIVEQKLVSEVKKRGGVCPKWVSPSFGGVPDRLVFLPKGKFGMVEVKAPGGKPRLLQVT 78
Query: 71 EIEELRRRGQRVKVLVSMEEVDNFLEELACT 101
+ G +V VL S+E++ L+E+ T
Sbjct: 79 RHKMFDGLGFKVHVLDSVEKIGEVLDEIEFT 109
>gi|304436364|ref|ZP_07396340.1| VRR-NUC domain protein [Selenomonas sp. oral taxon 149 str.
67H29BP]
gi|304370633|gb|EFM24282.1| VRR-NUC domain protein [Selenomonas sp. oral taxon 149 str.
67H29BP]
Length = 93
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 49/89 (55%)
Query: 11 EKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMS 70
EKD+EK L K + K + G G PDRL++ P G + ++E+K P + Q++
Sbjct: 3 EKDIEKELTARTKAMGGIAPKFTSPGFDGMPDRLVLLPRGRMEFVELKAPGRKPRPLQLA 62
Query: 71 EIEELRRRGQRVKVLVSMEEVDNFLEELA 99
LRR G +V V+ + ++D LE+++
Sbjct: 63 RHRLLRRLGFKVYVIDEINQIDGVLEDIS 91
>gi|329767791|ref|ZP_08259307.1| hypothetical protein HMPREF0428_01004 [Gemella haemolysans M341]
gi|328838892|gb|EGF88486.1| hypothetical protein HMPREF0428_01004 [Gemella haemolysans M341]
Length = 97
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 5/93 (5%)
Query: 10 TEKDVEKRLVTGAKKLDCWVRKAS--FVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQ 67
+EK E ++ K+ C+ K + + G +G PD L+I NG IEVK+ TG+ S
Sbjct: 3 SEKAFENKIKKFLKEKGCYFLKYNPEYFGIKGTPD-LLICCNGYFLGIEVKRETGKPSKL 61
Query: 68 QMSEIEELRRRGQRVKVLV--SMEEVDNFLEEL 98
Q+ +IEE++ G VL E+ +EEL
Sbjct: 62 QLKKIEEIKNAGGIAMVLYPSGFEKFKKLIEEL 94
>gi|255994013|ref|ZP_05427148.1| putative protein p44 [Eubacterium saphenum ATCC 49989]
gi|255993681|gb|EEU03770.1| putative protein p44 [Eubacterium saphenum ATCC 49989]
Length = 145
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 51/94 (54%), Gaps = 8/94 (8%)
Query: 10 TEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQM 69
TEKD+E+RL+ K K G PDR+++ G ++++EVK+P G LS +Q+
Sbjct: 6 TEKDIERRLIRKVKSYGDKTYKFISPTAAGVPDRIVLLA-GHVFFVEVKRPDGELSLRQV 64
Query: 70 SEIEELR-------RRGQRVKVLVSMEEVDNFLE 96
+ EL+ + R VL + +EVD ++E
Sbjct: 65 LRLIELKGTVPHKSKLIPRCAVLSTADEVDVWVE 98
>gi|300856811|ref|YP_003781795.1| phage-like protein [Clostridium ljungdahlii DSM 13528]
gi|300436926|gb|ADK16693.1| phage related protein [Clostridium ljungdahlii DSM 13528]
Length = 91
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%)
Query: 11 EKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMS 70
E +EKRL +K+ K G G PDR+++ P+G + ++E+K P + Q
Sbjct: 3 ESVIEKRLKKEIEKIGGKALKFVSPGMSGVPDRIVLLPHGKIIFVELKAPGKKRRKLQEY 62
Query: 71 EIEELRRRGQRVKVLVSMEEVDNFLEEL 98
+EL G RV+ + S+ V F++EL
Sbjct: 63 RAKELNTLGFRVECIDSISGVKQFIKEL 90
>gi|212712314|ref|ZP_03320442.1| hypothetical protein PROVALCAL_03402 [Providencia alcalifaciens
DSM 30120]
gi|212685060|gb|EEB44588.1| hypothetical protein PROVALCAL_03402 [Providencia alcalifaciens
DSM 30120]
Length = 89
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 41/79 (51%)
Query: 11 EKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMS 70
E +E+ LV KK+ K + GRRG PDR+++ P+G + ++E K P + Q+
Sbjct: 6 EDVIERHLVYKVKKVGGIAYKFTSPGRRGVPDRIVLLPHGKIIFVECKAPGEKPRPDQLR 65
Query: 71 EIEELRRRGQRVKVLVSME 89
E L G V VL S +
Sbjct: 66 EHARLFALGFHVVVLDSKD 84
>gi|284048431|ref|YP_003398770.1| VRR-NUC domain protein [Acidaminococcus fermentans DSM 20731]
gi|283952652|gb|ADB47455.1| VRR-NUC domain protein [Acidaminococcus fermentans DSM 20731]
Length = 100
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 45/94 (47%)
Query: 6 FHYQTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLS 65
++ EK +E LVT +K K G PDRL++ P+G + ++EVK P +
Sbjct: 1 MNFLREKQIEHSLVTAVRKQGGLALKFVSPSYAGMPDRLVLLPDGKMAFVEVKAPGKKPR 60
Query: 66 HQQMSEIEELRRRGQRVKVLVSMEEVDNFLEELA 99
Q + LR G +V VL + L+++A
Sbjct: 61 VLQEKQHRMLRALGFQVFVLDDASAIPGLLKKIA 94
>gi|268610657|ref|ZP_06144384.1| VRR_NUC domain-containing protein [Ruminococcus flavefaciens
FD-1]
Length = 93
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 4/90 (4%)
Query: 11 EKDVEKRLVTGAKKLD--CWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQ 68
E ++E +LV K CW K G G PDR+++ +G + ++EVK P + Q
Sbjct: 3 ENEIETKLVKAVKARGGVCW--KFVSPGTAGVPDRIVLMQSGRIAFVEVKAPGEKPRPLQ 60
Query: 69 MSEIEELRRRGQRVKVLVSMEEVDNFLEEL 98
I+ LRR G +V VL E++ ++E+
Sbjct: 61 RVRIKLLRRLGFKVYVLDGAEQIGGIIDEI 90
>gi|167039883|ref|YP_001662868.1| hypothetical protein Teth514_1238 [Thermoanaerobacter sp. X514]
gi|300915370|ref|ZP_07132684.1| VRR-NUC domain protein [Thermoanaerobacter sp. X561]
gi|307724793|ref|YP_003904544.1| VRR-NUC domain-containing protein [Thermoanaerobacter sp. X513]
gi|166854123|gb|ABY92532.1| hypothetical protein Teth514_1238 [Thermoanaerobacter sp. X514]
gi|300888646|gb|EFK83794.1| VRR-NUC domain protein [Thermoanaerobacter sp. X561]
gi|307581854|gb|ADN55253.1| VRR-NUC domain-containing protein [Thermoanaerobacter sp. X513]
Length = 93
Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 44/91 (48%)
Query: 11 EKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMS 70
EK +E++LV K + K + G G PDRLI+ PN L ++EVK P L Q
Sbjct: 3 EKKIEQQLVKEVKDIGGIALKIASPGFDGMPDRLILLPNRKLAFVEVKAPGKTLRPLQEK 62
Query: 71 EIEELRRRGQRVKVLVSMEEVDNFLEELACT 101
+L G V L ++++ L E+ +
Sbjct: 63 RKRQLEALGFLVFCLDHIDQIGGILHEIQAS 93
>gi|317132763|ref|YP_004092077.1| VRR-NUC domain-containing protein [Ethanoligenens harbinense
YUAN-3]
gi|315470742|gb|ADU27346.1| VRR-NUC domain-containing protein [Ethanoligenens harbinense
YUAN-3]
Length = 95
Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 49/94 (52%)
Query: 9 QTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQ 68
++EK +E++L + K+ K G G PDR+I+ P + + E+K P + Q
Sbjct: 2 RSEKQIEQKLASEVKRRGGIAPKFVSPGFDGMPDRIILLPGARIAFAELKAPGKKPRRLQ 61
Query: 69 MSEIEELRRRGQRVKVLVSMEEVDNFLEELACTL 102
+ LR+ G RV V+ + E++ ++E+ +L
Sbjct: 62 YARHRLLRKLGFRVYVIDNPEQIGGVIDEIENSL 95
>gi|194429282|ref|ZP_03061809.1| VRR-NUC domain protein [Escherichia coli B171]
gi|218555137|ref|YP_002388050.1| hypothetical protein ECIAI1_2667 [Escherichia coli IAI1]
gi|194412690|gb|EDX28985.1| VRR-NUC domain protein [Escherichia coli B171]
gi|218361905|emb|CAQ99505.1| conserved hypothetical protein from bacteriophage origin
[Escherichia coli IAI1]
gi|323159214|gb|EFZ45204.1| VRR-NUC domain protein [Escherichia coli E128010]
Length = 95
Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 38/80 (47%)
Query: 8 YQTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQ 67
Y+ E +EK LV KK K GRR PDR+++ P G + ++E K P
Sbjct: 3 YERENLIEKHLVAEVKKAGGVAFKFVSPGRRSVPDRIVLLPGGRIIFVECKSPGKPPRPD 62
Query: 68 QMSEIEELRRRGQRVKVLVS 87
Q+ E LR G V VL S
Sbjct: 63 QLREHGRLRALGFTVVVLDS 82
>gi|150391740|ref|YP_001321789.1| VRR_NUC domain-containing protein [Alkaliphilus metalliredigens
QYMF]
gi|149951602|gb|ABR50130.1| VRR_NUC domain protein [Alkaliphilus metalliredigens QYMF]
Length = 94
Score = 45.1 bits (105), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 46/89 (51%)
Query: 10 TEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQM 69
TEK +E++LV K+ K G G PDR+++ P G + ++E+K P ++ Q+
Sbjct: 2 TEKYIEQKLVKAVKERGGIAPKFVSPGLDGVPDRIVLLPMGRMAFVELKAPGNKMRPLQV 61
Query: 70 SEIEELRRRGQRVKVLVSMEEVDNFLEEL 98
+L G V + +E++ L+E+
Sbjct: 62 KRKTQLEALGFLVYCIDGVEQIGGVLDEI 90
>gi|213692068|ref|YP_002322654.1| hypothetical protein Blon_1186 [Bifidobacterium longum subsp.
infantis ATCC 15697]
gi|213523529|gb|ACJ52276.1| conserved hypothetical protein [Bifidobacterium longum subsp.
infantis ATCC 15697]
gi|320458180|dbj|BAJ68801.1| conserved hypothetical protein [Bifidobacterium longum subsp.
infantis ATCC 15697]
Length = 96
Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 43/86 (50%), Gaps = 3/86 (3%)
Query: 11 EKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMS 70
E VE+R A++ K GR G PDRL+ P G L+ +E+K+P G+ Q +
Sbjct: 6 ENTVERRFNMLARRHGGLSLKWVSPGRLGVPDRLLFMPGGRLYLVELKRPGGKPRASQNA 65
Query: 71 EIEELRRRGQRVKVLVSMEEVDNFLE 96
+L RG V V+ ++ D F +
Sbjct: 66 MFAKLETRGFHVWVV---DDPDAFFD 88
>gi|327461126|gb|EGF07459.1| VRR-NUC domain protein [Streptococcus sanguinis SK1057]
Length = 106
Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 48/91 (52%)
Query: 11 EKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMS 70
E+ +E++L ++K K G G PDR++ P G + ++E+K P + Q+
Sbjct: 3 ERAIEEKLRVESQKRGGLAMKFISPGLVGVPDRIVALPQGKIGFVELKAPGEKPRKIQVR 62
Query: 71 EIEELRRRGQRVKVLVSMEEVDNFLEELACT 101
+E+LR+ G V VL E++ L+++ T
Sbjct: 63 RMEQLRKLGFLVYVLDDKEKIGEILDDIQGT 93
>gi|307317156|ref|ZP_07596597.1| VRR-NUC domain protein [Sinorhizobium meliloti AK83]
gi|306897244|gb|EFN27989.1| VRR-NUC domain protein [Sinorhizobium meliloti AK83]
Length = 95
Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 42/85 (49%), Gaps = 3/85 (3%)
Query: 13 DVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLW-WIEVKKPTGRLSHQQMSE 71
DV++ LV K VRK + GRRG PD + GG W IE KK QQ E
Sbjct: 6 DVQRPLVEYGKSEGWLVRKVVYQGRRGSPDLWFL--KGGTWVLIEAKKFGDEARIQQKRE 63
Query: 72 IEELRRRGQRVKVLVSMEEVDNFLE 96
E LRR+G V V+ ++ E L+
Sbjct: 64 HERLRRKGANVYVVDTLAEGKRILD 88
>gi|260845242|ref|YP_003223020.1| hypothetical protein ECO103_3135 [Escherichia coli O103:H2 str.
12009]
gi|257760389|dbj|BAI31886.1| hypothetical protein ECO103_3135 [Escherichia coli O103:H2 str.
12009]
gi|309702942|emb|CBJ02273.1| putative phage related protein [Escherichia coli ETEC H10407]
Length = 97
Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 38/80 (47%)
Query: 8 YQTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQ 67
Y+ E +EK LV KK K GRR PDR+++ P G + ++E K P
Sbjct: 3 YERESLIEKHLVAEVKKAGGVAFKFISPGRRSVPDRIVLLPGGRIVFVECKAPGKPPRAG 62
Query: 68 QMSEIEELRRRGQRVKVLVS 87
Q+ E LR G V VL S
Sbjct: 63 QLREHGRLRALGFTVVVLDS 82
>gi|297587095|ref|ZP_06945740.1| VRR-NUC domain protein [Finegoldia magna ATCC 53516]
gi|297575076|gb|EFH93795.1| VRR-NUC domain protein [Finegoldia magna ATCC 53516]
Length = 65
Score = 43.9 bits (102), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%)
Query: 39 GCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLVSMEEVDNFLEEL 98
G PDR+I+ P G + ++E K+P G Q I + + G +V VL S E +D ++ +
Sbjct: 3 GIPDRIILLPKGKVGFVETKRPGGEPRPIQKKRIRQFKNLGFKVYVLDSKENIDEIIKRI 62
Query: 99 A 99
Sbjct: 63 G 63
>gi|197303502|ref|ZP_03168541.1| hypothetical protein RUMLAC_02224 [Ruminococcus lactaris ATCC
29176]
gi|197297500|gb|EDY32061.1| hypothetical protein RUMLAC_02224 [Ruminococcus lactaris ATCC
29176]
Length = 92
Score = 43.5 bits (101), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Query: 11 EKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMS 70
EK +E++LV KK K + G G PDR+++ P+G + ++EVK P + Q+
Sbjct: 3 EKYIEQKLVREVKKRGGLCEKWN-SGSSGWPDRIVLLPDGKIGFVEVKAPGEKSRKLQVH 61
Query: 71 EIEELRRRGQRVKVLVSMEEVDNFLEELACT 101
++LR G +V VL M ++ ++ +
Sbjct: 62 RHDQLRALGYKVFVLDDMGQIGGIIDAIQTA 92
>gi|313895645|ref|ZP_07829201.1| conserved hypothetical protein [Selenomonas sp. oral taxon 137 str.
F0430]
gi|312975771|gb|EFR41230.1| conserved hypothetical protein [Selenomonas sp. oral taxon 137 str.
F0430]
Length = 122
Score = 43.5 bits (101), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%)
Query: 39 GCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLVSMEEVDNFLEEL 98
G PDRL++ P G + ++E+K P + Q+ IE+LR G +V V+ EE+ + L
Sbjct: 63 GVPDRLVLMPGGKMCFMELKAPGRKPRPLQVRRIEQLRALGFKVYVVDGKEEIGGIINAL 122
>gi|256847829|ref|ZP_05553274.1| phage associated protein [Lactobacillus coleohominis 101-4-CHN]
gi|256715518|gb|EEU30494.1| phage associated protein [Lactobacillus coleohominis 101-4-CHN]
Length = 93
Score = 43.5 bits (101), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 42/88 (47%)
Query: 11 EKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMS 70
EK +E V + K + G PDRL++ P+G + ++E+K P Q+
Sbjct: 3 EKRIETAFVKATHQRGGLCLKFTSPSMAGVPDRLVLLPDGHMGFVEMKAPGKHPRPLQVQ 62
Query: 71 EIEELRRRGQRVKVLVSMEEVDNFLEEL 98
I +L+R G +V V +++ L+ +
Sbjct: 63 RINQLKRLGYQVFVCDQFDQIGGMLDAI 90
>gi|298346381|ref|YP_003719068.1| VRR-NUC domain-containing protein [Mobiluncus curtisii ATCC
43063]
gi|298236442|gb|ADI67574.1| VRR-NUC domain protein [Mobiluncus curtisii ATCC 43063]
Length = 93
Score = 43.5 bits (101), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 45/83 (54%), Gaps = 4/83 (4%)
Query: 11 EKDVEKRLVTGAKKLD--CWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQ 68
E+ +E+ LV + L CW K G G PDR+++ P+G + ++EVK P G++ Q
Sbjct: 3 EQHLEQALVKTVEALGGVCW--KLVSPGTAGVPDRIVLLPDGHVGFVEVKAPGGKVRAIQ 60
Query: 69 MSEIEELRRRGQRVKVLVSMEEV 91
+ +L+ G VL + +++
Sbjct: 61 KHRLRQLKHLGFTALVLNNPDDI 83
>gi|325687763|gb|EGD29784.1| VRR-NUC domain protein [Streptococcus sanguinis SK72]
Length = 103
Score = 43.5 bits (101), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 48/88 (54%)
Query: 11 EKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMS 70
E+++E++L ++K K G G PDR+++ P G L ++E+K P + Q+
Sbjct: 3 EREIEEKLRVESQKRGGLAMKFVSPGLIGVPDRIVVLPQGRLGFVELKAPGEKPRKIQVR 62
Query: 71 EIEELRRRGQRVKVLVSMEEVDNFLEEL 98
+E+LR+ G V VL ++ L+++
Sbjct: 63 RMEQLRKLGFLVYVLDDKGKIGEILDDI 90
>gi|300853543|ref|YP_003778527.1| phage-like protein [Clostridium ljungdahlii DSM 13528]
gi|300433658|gb|ADK13425.1| phage-related protein [Clostridium ljungdahlii DSM 13528]
Length = 93
Score = 43.1 bits (100), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 44/91 (48%)
Query: 11 EKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMS 70
EK +E +LVT KK+ K G G PDRL+ P+G ++E+K ++ Q++
Sbjct: 3 EKYIENKLVTAVKKMGGICPKFVSPGFDGVPDRLVFLPHGKFAFVELKAKGKKMRPLQVN 62
Query: 71 EIEELRRRGQRVKVLVSMEEVDNFLEELACT 101
+L + G V + ++ L E+ +
Sbjct: 63 RKMQLEQLGFLVYCIDDASKIGGILNEIQSS 93
>gi|269120030|ref|YP_003308207.1| VRR-NUC domain protein [Sebaldella termitidis ATCC 33386]
gi|268613908|gb|ACZ08276.1| VRR-NUC domain protein [Sebaldella termitidis ATCC 33386]
Length = 110
Score = 43.1 bits (100), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 47/92 (51%)
Query: 11 EKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMS 70
EKD+EK L KK+ K G G PDRL++ P +++E+K P + Q
Sbjct: 8 EKDIEKYLRDEIKKVGGIAYKFVSPGNAGVPDRLVLLPGRWSFFVELKAPGKKTRAVQDR 67
Query: 71 EIEELRRRGQRVKVLVSMEEVDNFLEELACTL 102
+I ++R V ++ S ++VD+ ++ + L
Sbjct: 68 QIRKIRNLDFSVLIIDSKKQVDDLVKMIKHHL 99
>gi|297585288|ref|YP_003701068.1| VRR-NUC domain-containing protein [Bacillus selenitireducens
MLS10]
gi|297143745|gb|ADI00503.1| VRR-NUC domain protein [Bacillus selenitireducens MLS10]
Length = 93
Score = 43.1 bits (100), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 36/62 (58%)
Query: 36 GRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLVSMEEVDNFL 95
G G PDRL I P G + ++E+K+P G+ Q+ E+LR+ G V V+ S E + +L
Sbjct: 28 GYAGIPDRLAILPGGRVAFVEMKRPGGKPRPLQVKRHEQLRQLGCDVAVIDSNERLGAWL 87
Query: 96 EE 97
E
Sbjct: 88 AE 89
>gi|315654959|ref|ZP_07907864.1| VRR-NUC domain protein [Mobiluncus curtisii ATCC 51333]
gi|315490920|gb|EFU80540.1| VRR-NUC domain protein [Mobiluncus curtisii ATCC 51333]
Length = 93
Score = 43.1 bits (100), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 45/83 (54%), Gaps = 4/83 (4%)
Query: 11 EKDVEKRLVTGAKKLD--CWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQ 68
E+ +E+ LV + L CW K G G PDR+++ P+G + ++EVK P G++ Q
Sbjct: 3 EQHLEQALVKTIEALGGVCW--KLVSPGTAGVPDRIVLLPDGHVGFVEVKAPGGKVRAIQ 60
Query: 69 MSEIEELRRRGQRVKVLVSMEEV 91
+ +L+ G VL + +++
Sbjct: 61 KHRLRQLKHLGFTALVLNNPDDI 83
>gi|322691246|ref|YP_004220816.1| hypothetical protein BLLJ_1057 [Bifidobacterium longum subsp.
longum JCM 1217]
gi|320456102|dbj|BAJ66724.1| conserved hypothetical protein [Bifidobacterium longum subsp.
longum JCM 1217]
Length = 88
Score = 42.7 bits (99), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 36 GRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLVSMEEVDNFL 95
GR G PDRL+ P G L+ +E+K+P G+ Q + +L RG V V+ ++ D F
Sbjct: 23 GRLGVPDRLLFMPGGRLYLVELKRPGGKPRASQSAMFAKLETRGFHVWVV---DDPDAFF 79
Query: 96 E 96
+
Sbjct: 80 D 80
>gi|323484111|ref|ZP_08089481.1| hypothetical protein HMPREF9474_01232 [Clostridium symbiosum
WAL-14163]
gi|323402553|gb|EGA94881.1| hypothetical protein HMPREF9474_01232 [Clostridium symbiosum
WAL-14163]
Length = 93
Score = 42.4 bits (98), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 44/91 (48%)
Query: 11 EKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMS 70
E +E++L KK+ K G G PDR+++ P+ + ++E+K P +L Q
Sbjct: 3 ENAIERQLAMAVKKMGGMAVKFVSPGLDGVPDRIVLLPDKKMAFVELKAPGKKLRPLQEK 62
Query: 71 EIEELRRRGQRVKVLVSMEEVDNFLEELACT 101
+L G V V+ E++ L+E+ T
Sbjct: 63 RRWQLEALGFPVYVIDGAEQIGGVLDEICST 93
>gi|50914496|ref|YP_060468.1| hypothetical protein M6_Spy1150 [Streptococcus pyogenes MGAS10394]
gi|40218554|gb|AAR83208.1| hypothetical protein [Streptococcus pyogenes]
gi|50261599|gb|AAT72367.1| unknown [Streptococcus pyogenes]
gi|50903570|gb|AAT87285.1| Phage-related protein [Streptococcus pyogenes MGAS10394]
Length = 100
Score = 42.4 bits (98), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 42/97 (43%)
Query: 5 SFHYQTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRL 64
F EK VE+ LV K K G PDRL+ P G +EVK P +
Sbjct: 4 GFRTMREKYVEQALVKSVKARGGICPKWVSPSFSGVPDRLVFLPKGKFGLVEVKAPDQKP 63
Query: 65 SHQQMSEIEELRRRGQRVKVLVSMEEVDNFLEELACT 101
Q+S + R G +V V+ +E + L+E+ T
Sbjct: 64 RKLQVSRHKLFERLGFKVYVIDRIEMIGEVLDEIDIT 100
>gi|153814244|ref|ZP_01966912.1| hypothetical protein RUMTOR_00453 [Ruminococcus torques ATCC 27756]
gi|145848640|gb|EDK25558.1| hypothetical protein RUMTOR_00453 [Ruminococcus torques ATCC 27756]
Length = 74
Score = 42.4 bits (98), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 36/63 (57%)
Query: 39 GCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLVSMEEVDNFLEEL 98
G PDR+++ P+G + ++E+K P + Q+ L R G V V+ ++E++ L+E+
Sbjct: 12 GVPDRIVLMPDGKMAFVELKAPGKKPRPLQLKRKRMLERLGFPVYVVDNIEQIGGILDEI 71
Query: 99 ACT 101
T
Sbjct: 72 QST 74
>gi|288799808|ref|ZP_06405267.1| putative protein p44 [Prevotella sp. oral taxon 299 str. F0039]
gi|288333056|gb|EFC71535.1| putative protein p44 [Prevotella sp. oral taxon 299 str. F0039]
Length = 100
Score = 42.4 bits (98), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Query: 10 TEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQM 69
+EK +E+ L K++ K G PDRLII NG + E+K GRL+ +Q
Sbjct: 8 SEKVLERNLQKRVKEIGGKAYKFISSNCTGVPDRLIIF-NGRFCFAEIKSYNGRLAPRQE 66
Query: 70 SEIEELRRRGQRVKVLVSMEEVDNFLE 96
EI +L+ G +V ++ + E++++ ++
Sbjct: 67 IEIRKLKNLGAKVFIVYTPEDIESIIK 93
>gi|238854133|ref|ZP_04644480.1| phage associated protein [Lactobacillus gasseri 202-4]
gi|238833209|gb|EEQ25499.1| phage associated protein [Lactobacillus gasseri 202-4]
Length = 93
Score = 42.0 bits (97), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 42/88 (47%)
Query: 11 EKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMS 70
EK +E V ++ K + G PDRL++ P G + ++E+K P Q+
Sbjct: 3 EKRIESAFVKATQQRGGLCLKFTSPSMTGVPDRLVLLPEGHMGFVEMKSPGKHPRPLQIQ 62
Query: 71 EIEELRRRGQRVKVLVSMEEVDNFLEEL 98
+ +L++ G +V V E++ L+ +
Sbjct: 63 RLSQLKQLGYQVFVCDQFEQIGGMLDAI 90
>gi|290466809|gb|ADD25739.1| hypothetical protein [Lactococcus phage 1358]
Length = 113
Score = 42.0 bits (97), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 30 RKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLVSME 89
R + G G PDR++I N + ++E+K+P Q+++ ++RR G V V+ E
Sbjct: 37 RAMKWTGGNGVPDRIVIV-NDCVVFVELKRPYATPRADQLAQHAKIRRAGGTVYVVDRFE 95
Query: 90 EVDNFLEELAC 100
+VD L++L
Sbjct: 96 QVDELLDKLTA 106
>gi|21283135|ref|NP_646223.1| hypothetical protein MW1406 [Staphylococcus aureus subsp. aureus
MW2]
gi|21204575|dbj|BAB95271.1| hypothetical protein [Staphylococcus aureus subsp. aureus MW2]
Length = 65
Score = 42.0 bits (97), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 34/63 (53%)
Query: 40 CPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLVSMEEVDNFLEELA 99
PDR+II P G +++E+K+ G+L Q + R +V VL + E+V+ F+ +
Sbjct: 1 MPDRIIIMPEGKTYFVEMKQEKGKLHPLQKYVHRQFENRDHKVYVLWNKEQVNTFIRMVG 60
Query: 100 CTL 102
T
Sbjct: 61 GTF 63
>gi|225573261|ref|ZP_03782016.1| hypothetical protein RUMHYD_01452 [Blautia hydrogenotrophica DSM
10507]
gi|225039393|gb|EEG49639.1| hypothetical protein RUMHYD_01452 [Blautia hydrogenotrophica DSM
10507]
Length = 104
Score = 41.6 bits (96), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 44/94 (46%)
Query: 8 YQTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQ 67
+ EK +E++ + K G G PDRL + P G + ++EVK P +
Sbjct: 11 FVKEKIIEQKFRAAVRTAGGVAVKFVSPGLDGMPDRLALLPGGRMAFVEVKAPGKKPRPL 70
Query: 68 QMSEIEELRRRGQRVKVLVSMEEVDNFLEELACT 101
Q + LRR G +V VL +++ ++E+ T
Sbjct: 71 QEARHRMLRRLGFQVYVLDDEKQIGGIIDEIQST 104
>gi|223044312|ref|ZP_03614347.1| phage protein [Staphylococcus capitis SK14]
gi|222442280|gb|EEE48390.1| phage protein [Staphylococcus capitis SK14]
Length = 102
Score = 41.6 bits (96), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 35/59 (59%)
Query: 38 RGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLVSMEEVDNFLE 96
+G D P+G +++IEVKKP G++ +Q+ IE ++++G V S+E+ +E
Sbjct: 42 QGFCDLFGFRPDGQIFFIEVKKPGGKIRDKQIKFIETVKKKGALAGVAYSVEDAIEIIE 100
>gi|116630099|ref|YP_815271.1| Phage associated protein [Lactobacillus gasseri ATCC 33323]
gi|116095681|gb|ABJ60833.1| Phage associated protein [Lactobacillus gasseri ATCC 33323]
Length = 103
Score = 41.6 bits (96), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 42/88 (47%)
Query: 11 EKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMS 70
EK +E V ++ K + G PDRL++ P G + ++E+K P Q+
Sbjct: 13 EKRIESAFVKATQQRGGLCLKFTSPSMTGVPDRLVLLPEGHMGFVEMKSPGKHPRPLQIQ 72
Query: 71 EIEELRRRGQRVKVLVSMEEVDNFLEEL 98
+ +L++ G +V V E++ L+ +
Sbjct: 73 RLSQLKQLGYQVFVCDQFEQIGGMLDAI 100
>gi|125974152|ref|YP_001038062.1| hypothetical protein Cthe_1646 [Clostridium thermocellum ATCC
27405]
gi|125714377|gb|ABN52869.1| hypothetical protein Cthe_1646 [Clostridium thermocellum ATCC
27405]
Length = 100
Score = 41.6 bits (96), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Query: 27 CWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLV 86
CW G G PD +I NG EVK P+G+ + Q + I+++ G V+
Sbjct: 22 CWKEHGGMYGTAGLPD-IIACVNGRFIAFEVKTPSGKTTKLQEATIKKILNAGGVAAVVH 80
Query: 87 SMEEVDNFLEE 97
S++EV LE+
Sbjct: 81 SVDEVKVILEK 91
>gi|291336802|gb|ADD96337.1| hypothetical protein BACINT_02220 [uncultured organism
MedDCM-OCT-S08-C700]
Length = 79
Score = 41.6 bits (96), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 10 TEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQM 69
TE +K+L+ +K V K + G PD + + P+ + +IEVK P GRLS Q
Sbjct: 2 TEAQYQKKLIDRHEKEGWTVIKLIMCNKAGLPDLICMKPDE-VKFIEVKGPKGRLSEVQK 60
Query: 70 SEIEELRRRGQRVKVL 85
IEEL+ G V+V+
Sbjct: 61 YRIEELKEAGFDVEVM 76
>gi|237737302|ref|ZP_04567783.1| predicted protein [Fusobacterium mortiferum ATCC 9817]
gi|229421164|gb|EEO36211.1| predicted protein [Fusobacterium mortiferum ATCC 9817]
Length = 117
Score = 41.6 bits (96), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Query: 30 RKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLVSME 89
R F ++G PD +I NG +EVK PTG+ S +Q E+ + G V+ S E
Sbjct: 46 RSLPFGAKKGIPDIWVII-NGKTIGLEVKTPTGKQSKEQKEIQEKFIKNGADYYVVRSYE 104
Query: 90 EVDNFLEE 97
EV N L++
Sbjct: 105 EVKNILDK 112
>gi|227544669|ref|ZP_03974718.1| phage associated protein [Lactobacillus reuteri CF48-3A]
gi|300909416|ref|ZP_07126877.1| VRR-NUC domain protein [Lactobacillus reuteri SD2112]
gi|227185351|gb|EEI65422.1| phage associated protein [Lactobacillus reuteri CF48-3A]
gi|300893281|gb|EFK86640.1| VRR-NUC domain protein [Lactobacillus reuteri SD2112]
Length = 148
Score = 41.6 bits (96), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 21/88 (23%), Positives = 42/88 (47%)
Query: 11 EKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMS 70
EK +E V + K + G PDRL++ P+G + ++E+K P Q+
Sbjct: 58 EKQIETTFVKATHQRGGLCLKFTSPSMAGVPDRLVLLPDGHMGFVEMKAPGKHPRPLQVQ 117
Query: 71 EIEELRRRGQRVKVLVSMEEVDNFLEEL 98
+ +L++ G +V V +++ L+ +
Sbjct: 118 RLNQLKQLGYQVFVCDQFDQIGGMLDAI 145
>gi|227530257|ref|ZP_03960306.1| VRR_NUC domain protein [Lactobacillus vaginalis ATCC 49540]
gi|227349830|gb|EEJ40121.1| VRR_NUC domain protein [Lactobacillus vaginalis ATCC 49540]
Length = 93
Score = 41.2 bits (95), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 42/88 (47%)
Query: 11 EKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMS 70
EK +E V + K + G PDRL++ P+G + ++E+K P R Q+
Sbjct: 3 EKRIETAFVKATHQRGGLCLKFTSPSMAGVPDRLVLLPDGHMGFVEMKAPGKRPRPLQVQ 62
Query: 71 EIEELRRRGQRVKVLVSMEEVDNFLEEL 98
+ +L++ G +V V ++ L+ +
Sbjct: 63 RLSQLKQLGYQVFVCDQFGQIGGMLDAI 90
>gi|319757799|gb|ADV69741.1| hypothetical protein SSUJS14_0650 [Streptococcus suis JS14]
Length = 93
Score = 41.2 bits (95), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 41/91 (45%)
Query: 11 EKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMS 70
EK VE+ LV K K G PDRL+ PNG +EVK P + Q+S
Sbjct: 3 EKYVEQALVKSVKARGGICPKWVSPSFSGVPDRLVFLPNGKFGLVEVKAPDQKPRMLQVS 62
Query: 71 EIEELRRRGQRVKVLVSMEEVDNFLEELACT 101
+ + G V V+ +E + L+E+ T
Sbjct: 63 RHKLFEQLGFTVYVIDRIEMIGEVLDEIDIT 93
>gi|331090253|ref|ZP_08339140.1| hypothetical protein HMPREF1025_02723 [Lachnospiraceae bacterium
3_1_46FAA]
gi|330401872|gb|EGG81447.1| hypothetical protein HMPREF1025_02723 [Lachnospiraceae bacterium
3_1_46FAA]
Length = 108
Score = 41.2 bits (95), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 41/91 (45%)
Query: 11 EKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMS 70
E +EK LV AK K G G PDRL++ P G ++E+K P +L +
Sbjct: 18 ESVIEKALVKEAKSRGGMAVKFVSPGFDGVPDRLVLLPGGKCAFVELKAPGKKLRPLKEK 77
Query: 71 EIEELRRRGQRVKVLVSMEEVDNFLEELACT 101
+L G V V+ +E++ L + T
Sbjct: 78 RKHQLEALGFSVYVIDGLEQIGGVLHGIQTT 108
>gi|313618478|gb|EFR90481.1| putative protein p44 [Listeria innocua FSL S4-378]
Length = 93
Score = 41.2 bits (95), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 43/91 (47%)
Query: 11 EKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMS 70
EK +E++LV K + K G G PDR+++ P G + ++E K ++ Q
Sbjct: 3 EKYIEQKLVATVKSMGGMAPKFVSPGIDGMPDRIVLLPMGRIAFVECKATGKKMRPLQNK 62
Query: 71 EIEELRRRGQRVKVLVSMEEVDNFLEELACT 101
++L G V L +E++ L E+ T
Sbjct: 63 RKKQLEALGFLVYCLDDIEQIGGILSEIQAT 93
>gi|76787039|ref|YP_329360.1| hypothetical protein SAK_0732 [Streptococcus agalactiae A909]
gi|76562096|gb|ABA44680.1| conserved hypothetical protein [Streptococcus agalactiae A909]
Length = 93
Score = 41.2 bits (95), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 44/91 (48%)
Query: 11 EKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMS 70
EK VE++LV+ + K G PDRL+ P+G +EVK P + Q+S
Sbjct: 3 EKVVERKLVSEVRNRGGICPKWVSPSFAGVPDRLVFLPSGKFGLVEVKAPGEKPRLLQVS 62
Query: 71 EIEELRRRGQRVKVLVSMEEVDNFLEELACT 101
R G +V VL ++++ L+E+ T
Sbjct: 63 RHRLFERLGFKVHVLDRVDKIGEVLDEIETT 93
>gi|262113724|emb|CAR95391.1| hypothetical protein [Streptococcus phage phi-m46.1]
Length = 93
Score = 40.8 bits (94), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 40/91 (43%)
Query: 11 EKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMS 70
EK VE+ LV K K G PDRL+ PNG EVK P + Q S
Sbjct: 3 EKYVEQALVKSVKARGGICPKWVSPSFSGVPDRLVFLPNGKFGLAEVKAPDQKPRKLQGS 62
Query: 71 EIEELRRRGQRVKVLVSMEEVDNFLEELACT 101
+ R G +V V+ +E + L+E+ T
Sbjct: 63 RHKLFERLGFKVYVIDRIEMIGEVLDEIDIT 93
>gi|256003542|ref|ZP_05428532.1| VRR-NUC domain protein [Clostridium thermocellum DSM 2360]
gi|255992566|gb|EEU02658.1| VRR-NUC domain protein [Clostridium thermocellum DSM 2360]
gi|316941394|gb|ADU75428.1| VRR-NUC domain-containing protein [Clostridium thermocellum DSM
1313]
Length = 95
Score = 40.4 bits (93), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 27 CWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLV 86
CW G G PD +I NG E+K P+G+ + Q + I ++ G V+
Sbjct: 22 CWKEHGGMYGTAGIPD-IIACVNGRFIAFEIKTPSGKTTKLQEATIRKILNAGGVAAVVH 80
Query: 87 SMEEVDNFLEE 97
S++EV LE+
Sbjct: 81 SVDEVKVILEK 91
>gi|328913306|gb|AEB64902.1| hypothetical protein LL3_03372 [Bacillus amyloliquefaciens LL3]
Length = 83
Score = 40.4 bits (93), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 34/60 (56%)
Query: 36 GRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLVSMEEVDNFL 95
G G PDR+++ P G L ++E+K P + Q+ ++L G V+VL S++ + F+
Sbjct: 7 GLSGVPDRIVLLPGGKLVFVEMKAPGEKPRPLQLKRKKDLETMGFEVRVLDSIDSITAFV 66
>gi|227544672|ref|ZP_03974721.1| phage associated protein [Lactobacillus reuteri CF48-3A]
gi|300909461|ref|ZP_07126922.1| VRR-NUC domain protein [Lactobacillus reuteri SD2112]
gi|227185348|gb|EEI65419.1| phage associated protein [Lactobacillus reuteri CF48-3A]
gi|300893326|gb|EFK86685.1| VRR-NUC domain protein [Lactobacillus reuteri SD2112]
Length = 148
Score = 40.4 bits (93), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 41/88 (46%)
Query: 11 EKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMS 70
EK +E V + K G PDRL++ P+G + ++E+K P R Q+
Sbjct: 58 EKQIETAFVKATHQRGGLCLKFISPSMAGVPDRLVLLPDGHMGFVEMKAPGKRPRPLQVQ 117
Query: 71 EIEELRRRGQRVKVLVSMEEVDNFLEEL 98
+ +L++ G +V V ++ L+ +
Sbjct: 118 RLSQLKQLGYQVFVCDQFGQIGGMLDAI 145
>gi|71903675|ref|YP_280478.1| phage protein [Streptococcus pyogenes MGAS6180]
gi|71802770|gb|AAX72123.1| phage protein [Streptococcus pyogenes MGAS6180]
Length = 94
Score = 40.4 bits (93), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 34/62 (54%)
Query: 38 RGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLVSMEEVDNFLEE 97
+G D PNG +++IEVK TGR+ +Q +E + RG V V S+E+ N + +
Sbjct: 32 KGFCDLFGFKPNGQIFFIEVKNETGRIRPEQKKFMEVMASRGALVGVARSVEDALNIVND 91
Query: 98 LA 99
+
Sbjct: 92 TS 93
>gi|259502600|ref|ZP_05745502.1| hypothetical protein HMPREF0494_0896 [Lactobacillus antri DSM
16041]
gi|259169415|gb|EEW53910.1| hypothetical protein HMPREF0494_0896 [Lactobacillus antri DSM
16041]
Length = 93
Score = 40.0 bits (92), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/88 (23%), Positives = 42/88 (47%)
Query: 11 EKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMS 70
EK +E V + K G PDRL++ P+G + ++E+K P Q+
Sbjct: 3 EKQIETAFVKATHQRGGLCLKFISPSMAGVPDRLVLLPDGHMGFVEMKAPGKHPRPLQVQ 62
Query: 71 EIEELRRRGQRVKVLVSMEEVDNFLEEL 98
+ +L++ G +V V ++++ L+ +
Sbjct: 63 RLNQLKQLGFQVFVCDQLDQIGGMLDAI 90
>gi|212638493|ref|YP_002315013.1| RecB family endonuclease [Anoxybacillus flavithermus WK1]
gi|212559973|gb|ACJ33028.1| RecB family endonuclease [Anoxybacillus flavithermus WK1]
Length = 105
Score = 40.0 bits (92), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 3/95 (3%)
Query: 10 TEKDVEKRLVTGAKKLDCWVRK--ASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQ 67
TEK +E ++ +L W K S + G PD +I + IE+K+P G++S
Sbjct: 2 TEKTIENQIKRYLDRLGVWYMKVHGSMYQKAGVPD-IIACIDSVFVGIEIKRPGGKVSVL 60
Query: 68 QMSEIEELRRRGQRVKVLVSMEEVDNFLEELACTL 102
Q I+E+ + G V S+E+V + EL L
Sbjct: 61 QQLNIDEINKNGGCAFVAYSVEDVQRKIAELRHAL 95
>gi|23455863|ref|NP_695093.1| hypothetical protein O1205p15 [Streptococcus phage O1205]
gi|2444095|gb|AAC79531.1| ORF15 [Streptococcus phage O1205]
Length = 86
Score = 39.7 bits (91), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 34/63 (53%)
Query: 38 RGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLVSMEEVDNFLEE 97
+G D P+G +++IEVK GRL Q +E +++RG V V S+++ + + E
Sbjct: 24 KGFCDLFGFRPDGQIFFIEVKNEKGRLRDDQKKFMEAMKKRGALVGVARSVKDAMDIVNE 83
Query: 98 LAC 100
C
Sbjct: 84 KKC 86
>gi|304406780|ref|ZP_07388435.1| VRR-NUC domain protein [Paenibacillus curdlanolyticus YK9]
gi|304344313|gb|EFM10152.1| VRR-NUC domain protein [Paenibacillus curdlanolyticus YK9]
Length = 102
Score = 39.7 bits (91), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 42/91 (46%)
Query: 11 EKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMS 70
E+D+E L + K + G G PDR+++ P G + ++E+K P + + Q++
Sbjct: 3 ERDIETYLREKVRAAGGKAYKWTSPGNAGVPDRIVMLPGGRVAFVELKAPGKKATPLQVN 62
Query: 71 EIEELRRRGQRVKVLVSMEEVDNFLEELACT 101
+ + G V V+ S D F+ +
Sbjct: 63 QQRTISNLGLPVTVIDSKAGADAFISRMQAA 93
>gi|237737480|ref|ZP_04567961.1| predicted protein [Fusobacterium mortiferum ATCC 9817]
gi|229421342|gb|EEO36389.1| predicted protein [Fusobacterium mortiferum ATCC 9817]
Length = 117
Score = 39.3 bits (90), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 30 RKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLVSME 89
RK ++G PD +I NG +EVK PTG+ S +Q E+ + G V+ S E
Sbjct: 46 RKLPTGAKKGIPDIWVII-NGKTIGLEVKTPTGKQSKEQKEIQEKFIKNGADYYVVRSYE 104
Query: 90 EVDNFLEE 97
EV N L +
Sbjct: 105 EVKNILNK 112
>gi|311245149|ref|XP_003121714.1| PREDICTED: fanconi-associated nuclease 1-like [Sus scrofa]
Length = 1020
Score = 38.9 bits (89), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 37 RRGCPDRLI-ITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKV 84
R G PD ++ + N +EVK P RLSH+QM ++ELRR G V+V
Sbjct: 958 RGGLPDLVVWNSQNHRFKLVEVKGPNDRLSHKQMIWLDELRRLGAEVEV 1006
>gi|19746258|ref|NP_607394.1| hypothetical protein spyM18_1287 [Streptococcus pyogenes
MGAS8232]
gi|19748445|gb|AAL97893.1| hypothetical phage protein [Streptococcus pyogenes MGAS8232]
Length = 94
Score = 38.5 bits (88), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 30/54 (55%)
Query: 38 RGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLVSMEEV 91
+G D PNG +++IEVK TGR+ +Q +E + RG V V S+E+
Sbjct: 32 KGFCDLFGFKPNGQIFFIEVKNETGRIRPEQKKFMEVMASRGALVGVARSVEDA 85
>gi|296203919|ref|XP_002749127.1| PREDICTED: coiled-coil domain-containing protein MTMR15-like
[Callithrix jacchus]
Length = 1166
Score = 38.5 bits (88), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Query: 37 RRGCPDRLI-ITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKV 84
R G PD ++ TP+ +EVK P+ RLSH+QM ++EL++ G V+V
Sbjct: 1104 RGGLPDLVVWNTPSHRCKLVEVKGPSDRLSHKQMIWLDELQKLGAEVEV 1152
>gi|152990201|ref|YP_001355923.1| hypothetical protein NIS_0452 [Nitratiruptor sp. SB155-2]
gi|151422062|dbj|BAF69566.1| phage-related protein [Nitratiruptor sp. SB155-2]
Length = 91
Score = 38.1 bits (87), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Query: 14 VEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIE 73
++K+++ KK C+ K G PD ++ NG IEVK + + QM ++E
Sbjct: 6 IQKKILDFLKKRGCYAVKVIAANESGTPD-ILACCNGKFVGIEVKAGRNKPTKLQMHKLE 64
Query: 74 ELRRRGQRVKVLVSMEEVDNFLEE 97
+++ V S+E+V+ LE+
Sbjct: 65 KIKEAAGISMVAYSVEDVEKMLED 88
>gi|149910747|ref|ZP_01899382.1| hypothetical protein PE36_00175 [Moritella sp. PE36]
gi|149806187|gb|EDM66166.1| hypothetical protein PE36_00175 [Moritella sp. PE36]
Length = 113
Score = 38.1 bits (87), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 33/66 (50%)
Query: 38 RGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLVSMEEVDNFLEE 97
RG D + +T NG IEVK PTGR+S Q ++ + G V+ S+++V L
Sbjct: 46 RGTADIIGMTCNGKFLAIEVKTPTGRISDHQRMWLKRVAMHGGLAAVVRSIDDVKASLNA 105
Query: 98 LACTLY 103
+Y
Sbjct: 106 GCGVVY 111
>gi|21910491|ref|NP_664759.1| hypothetical protein SpyM3_0955 [Streptococcus pyogenes MGAS315]
gi|28876239|ref|NP_795452.1| hypothetical protein SpyM3_0955 [Streptococcus pyogenes phage
315.2]
gi|28895812|ref|NP_802162.1| hypothetical protein SPs0900 [Streptococcus pyogenes SSI-1]
gi|21904690|gb|AAM79562.1| conserved hypothetical protein - phage-associated [Streptococcus
pyogenes MGAS315]
gi|28811061|dbj|BAC63995.1| hypothetical protein [Streptococcus pyogenes SSI-1]
Length = 106
Score = 38.1 bits (87), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 30/53 (56%)
Query: 38 RGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLVSMEE 90
+G D PNG +++IEVK TGR+ +Q +E + RG V V S+E+
Sbjct: 44 KGFCDLFGFKPNGQIFFIEVKNETGRIRPEQKKFMEVMASRGALVGVARSVED 96
>gi|306827204|ref|ZP_07460494.1| phage protein [Streptococcus pyogenes ATCC 10782]
gi|304430660|gb|EFM33679.1| phage protein [Streptococcus pyogenes ATCC 10782]
Length = 116
Score = 38.1 bits (87), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 30/54 (55%)
Query: 38 RGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLVSMEEV 91
+G D PNG +++IEVK TGR+ +Q +E + RG V V S+E+
Sbjct: 54 KGFCDLFGFKPNGQIFFIEVKNETGRIRPEQKKFMEVMASRGALVGVARSVEDA 107
>gi|289167299|ref|YP_003445566.1| hypothetical protein smi_0426 [Streptococcus mitis B6]
gi|288906864|emb|CBJ21698.1| conserved hypothetical protein [Streptococcus mitis B6]
Length = 102
Score = 38.1 bits (87), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 31/54 (57%)
Query: 38 RGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLVSMEEV 91
+G D P+G ++++EVKK GR+ +Q + IE +R+RG V S +E
Sbjct: 44 KGHADLYGFRPDGQIFYVEVKKENGRVRPEQENFIETVRKRGAIAGVARSAQEA 97
>gi|126277238|ref|XP_001373737.1| PREDICTED: similar to novel lectin C-type domain containing protein
[Monodelphis domestica]
Length = 1112
Score = 37.7 bits (86), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 37 RRGCPDRLIITPNGGLW-WIEVKKPTGRLSHQQMSEIEELRRRGQRVKV 84
R G PD ++ L+ +EVK P RLSH+QM ++EL++ G +V+V
Sbjct: 1050 RGGLPDLVVWNTQKNLFKLVEVKGPNDRLSHKQMIWLDELQQLGAQVEV 1098
>gi|281418296|ref|ZP_06249316.1| VRR-NUC domain protein [Clostridium thermocellum JW20]
gi|281409698|gb|EFB39956.1| VRR-NUC domain protein [Clostridium thermocellum JW20]
Length = 100
Score = 37.7 bits (86), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 27 CWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLV 86
CW G G PD +I NG EVK +G+ + Q + I+++ G V+
Sbjct: 22 CWKEHGGMYGTAGIPD-IIACVNGRFVAFEVKTASGKATKLQEATIKKILNVGGVAAVVR 80
Query: 87 SMEEVDNFLEE 97
S++EV LE+
Sbjct: 81 SVDEVKVILEK 91
>gi|56750814|ref|YP_171515.1| hypothetical protein syc0805_c [Synechococcus elongatus PCC 6301]
gi|81299537|ref|YP_399745.1| hypothetical protein Synpcc7942_0726 [Synechococcus elongatus PCC
7942]
gi|56685773|dbj|BAD78995.1| hypothetical protein [Synechococcus elongatus PCC 6301]
gi|81168418|gb|ABB56758.1| conserved hypothetical protein [Synechococcus elongatus PCC 7942]
Length = 120
Score = 37.4 bits (85), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 27/42 (64%)
Query: 55 IEVKKPTGRLSHQQMSEIEELRRRGQRVKVLVSMEEVDNFLE 96
IEVK PTGR++ +Q S I+ ++R G R V SM++ + +
Sbjct: 74 IEVKTPTGRVTPEQQSFIDFVQRSGGRAGVARSMQDANKIIS 115
>gi|297242713|ref|ZP_06926651.1| hypothetical protein GVAMD_0725 [Gardnerella vaginalis AMD]
gi|296888924|gb|EFH27658.1| hypothetical protein GVAMD_0725 [Gardnerella vaginalis AMD]
Length = 96
Score = 37.4 bits (85), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 46/94 (48%)
Query: 8 YQTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQ 67
+ EK+ E++LV K K + G PDRL++ G + ++E+K P +
Sbjct: 3 FLREKETERKLVRDVKAAGGMAIKLTSPSVDGLPDRLVLLNGGKIGFVELKAPGKKPRVL 62
Query: 68 QMSEIEELRRRGQRVKVLVSMEEVDNFLEELACT 101
Q+ +++L+ G +V V+ ++ ++ + T
Sbjct: 63 QVKRMKDLQALGFKVFVVDEKSQIGGVIDAIRAT 96
>gi|220924928|ref|YP_002500230.1| VRR-NUC domain-containing protein [Methylobacterium nodulans ORS
2060]
gi|219949535|gb|ACL59927.1| VRR-NUC domain protein [Methylobacterium nodulans ORS 2060]
Length = 129
Score = 37.4 bits (85), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 29/52 (55%)
Query: 39 GCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLVSMEE 90
G PD ++ G + IEVK P G LS Q + + LR RG V V+ S+E+
Sbjct: 51 GHPDLIVYGRGGRCFLIEVKAPGGSLSASQRAFLPGLRERGFPVHVVDSVED 102
>gi|9632454|ref|NP_049426.1| hypothetical protein DT1p37 [Streptococcus phage DT1]
gi|4530174|gb|AAD21914.1| unknown [Streptococcus phage DT1]
Length = 107
Score = 37.4 bits (85), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 38 RGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLVSMEEV 91
+G D P+G +++IEVK GRL Q +E +++RG V V S+E+
Sbjct: 44 KGFCDLFGFRPDGQIFFIEVKNEKGRLRDDQKKFMEAMKKRGALVGVARSVEDA 97
>gi|220922591|ref|YP_002497893.1| VRR-NUC domain-containing protein [Methylobacterium nodulans ORS
2060]
gi|219947198|gb|ACL57590.1| VRR-NUC domain protein [Methylobacterium nodulans ORS 2060]
Length = 129
Score = 37.0 bits (84), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 44/99 (44%), Gaps = 16/99 (16%)
Query: 9 QTEKDVEKRLVTGA-KKLDCWVRKASFVGRRG---------------CPDRLIITPNGGL 52
+ E+ ++ ++V ++ DC GRRG PD ++ G
Sbjct: 5 RPEQVIQTKIVVAMHRRFDCLCVHVPNGGRRGKREGVAFKEMGVEAGHPDLIVYGRGGRC 64
Query: 53 WWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLVSMEEV 91
+ IEVK P G LS Q + + LR RG V V+ S++E
Sbjct: 65 FLIEVKAPGGSLSASQRAFLPGLRERGFPVHVVDSVDEA 103
>gi|76788419|ref|YP_329253.1| hypothetical protein SAK_0621 [Streptococcus agalactiae A909]
gi|76799184|ref|ZP_00781364.1| gp106 [Streptococcus agalactiae 18RS21]
gi|76563476|gb|ABA46060.1| conserved hypothetical protein [Streptococcus agalactiae A909]
gi|76585460|gb|EAO62038.1| gp106 [Streptococcus agalactiae 18RS21]
Length = 93
Score = 37.0 bits (84), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 30/54 (55%)
Query: 38 RGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLVSMEEV 91
+G D PNG +++IEVK TGR+ +Q + +E + +G V S+E+
Sbjct: 32 KGFCDLFGFKPNGQIFFIEVKNETGRIRPEQKNFMEVMASKGALAGVARSVEDA 85
>gi|227496459|ref|ZP_03926743.1| VRR-NUC domain protein [Actinomyces urogenitalis DSM 15434]
gi|226834015|gb|EEH66398.1| VRR-NUC domain protein [Actinomyces urogenitalis DSM 15434]
Length = 93
Score = 37.0 bits (84), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 41/90 (45%), Gaps = 4/90 (4%)
Query: 11 EKDVEKRLV--TGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQ 68
E+ VE LV A+ CW K G G PDRL++ P G + +EVK P R Q
Sbjct: 3 ERAVEAALVREVRARGGLCW--KLVSPGTVGVPDRLVLLPAGHVGLVEVKAPGERPRAVQ 60
Query: 69 MSEIEELRRRGQRVKVLVSMEEVDNFLEEL 98
I+++R G VL +V + +
Sbjct: 61 RVRIDQVRALGTPCLVLDDPAKVGEVCDAI 90
>gi|9632928|ref|NP_049957.1| hypothetical protein Sfi19p37 [Streptococcus phage Sfi19]
gi|9634998|ref|NP_056714.1| gp106 [Streptococcus phage Sfi11]
gi|5524023|gb|AAD44076.1|AF115102_35 orf106 gp [Streptococcus phage Sfi19]
gi|7523558|gb|AAF63061.1|AF158600_15 gp106 [Streptococcus phage Sfi11]
gi|7523588|gb|AAF63090.1|AF158601_18 gp106 [Streptococcus phage SFi18]
Length = 106
Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 32/60 (53%)
Query: 38 RGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLVSMEEVDNFLEE 97
+G D P+G +++IEVK GRL Q + +++RG V V S++E + + E
Sbjct: 44 KGFCDLFGFRPDGQIFFIEVKNEKGRLREDQKKFMNAMKKRGALVGVARSVKEAMDIVNE 103
>gi|54303111|ref|YP_133104.1| hypothetical protein PBPRB1438 [Photobacterium profundum SS9]
gi|46916539|emb|CAG23304.1| hypothetical protein PBPRB1438 [Photobacterium profundum SS9]
Length = 120
Score = 36.6 bits (83), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 32/60 (53%)
Query: 38 RGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLVSMEEVDNFLEE 97
+G D + T NG +EVK G++S +Q+ IE++R+ G + S +E D + E
Sbjct: 44 KGSSDLIGWTTNGIFLAVEVKTLNGKVSPEQIKFIEDVRKHGGIAFIATSRDEFDRLMTE 103
>gi|66391798|ref|YP_238522.1| hypothetical protein SPV2972_gp39 [Streptococcus phage 2972]
gi|56718455|gb|AAW27961.1| hypothetical protein [Streptococcus phage 2972]
Length = 106
Score = 36.6 bits (83), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 32/60 (53%)
Query: 38 RGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLVSMEEVDNFLEE 97
+G D P+G +++IEVK GRL Q + +++RG V V S++E + + E
Sbjct: 44 KGFCDLFGFRPDGQIFFIEVKNEKGRLREDQKKFMNAMKKRGALVGVARSVKEAMDIVNE 103
>gi|168229314|ref|YP_001686835.1| orf41 [Streptococcus phage 858]
gi|155241709|gb|ABT18029.1| orf41 [Streptococcus phage 858]
Length = 106
Score = 36.6 bits (83), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 32/60 (53%)
Query: 38 RGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLVSMEEVDNFLEE 97
+G D P+G +++IEVK GRL Q + +++RG V V S++E + + E
Sbjct: 44 KGFCDLFGFRPDGQIFFIEVKNEKGRLREDQKKFMNAMKKRGALVGVARSVKEAMDIVNE 103
>gi|21910874|ref|NP_665142.1| hypothetical protein SpyM3_1338 [Streptococcus pyogenes MGAS315]
gi|28876420|ref|NP_795621.1| hypothetical protein SpyM3_1338 [Streptococcus pyogenes phage
315.5]
gi|28895436|ref|NP_801786.1| hypothetical protein SPs0524 [Streptococcus pyogenes SSI-1]
gi|21905080|gb|AAM79945.1| conserved hypothetical protein - phage-associated [Streptococcus
pyogenes MGAS315]
gi|28810682|dbj|BAC63619.1| hypothetical protein [Streptococcus pyogenes SSI-1]
Length = 106
Score = 36.6 bits (83), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 31/53 (58%)
Query: 38 RGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLVSMEE 90
+G D P+G +++IEVK TGR+ +Q + +E + RG V V S+E+
Sbjct: 44 KGFCDLFGFKPDGQIFFIEVKNETGRVRPEQKNFMEVMASRGALVGVARSVED 96
>gi|326926515|ref|XP_003209445.1| PREDICTED: fanconi-associated nuclease 1-like [Meleagris gallopavo]
Length = 1041
Score = 36.2 bits (82), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 37 RRGCPDRLI-ITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKV 84
R G PD ++ T + +EVK P RLSH+QM + EL++ G V+V
Sbjct: 979 RGGLPDLVVWSTHSNHFKLVEVKGPNDRLSHKQMIWLSELKKLGAAVEV 1027
>gi|85859013|ref|YP_461215.1| putative cytoplasmic protein [Syntrophus aciditrophicus SB]
gi|85722104|gb|ABC77047.1| hypothetical cytosolic protein [Syntrophus aciditrophicus SB]
Length = 105
Score = 36.2 bits (82), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 30/61 (49%)
Query: 35 VGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLVSMEEVDNF 94
+GR G PD LI NG IEVK G+ + Q + + G V+ S+E+V+
Sbjct: 43 MGRPGSPDLLIFLKNGRCAHIEVKNEKGKQNEAQKEYEQAVTDLGHDYHVVRSVEQVEQL 102
Query: 95 L 95
L
Sbjct: 103 L 103
>gi|262372948|ref|ZP_06066227.1| conserved hypothetical protein [Acinetobacter junii SH205]
gi|262312973|gb|EEY94058.1| conserved hypothetical protein [Acinetobacter junii SH205]
Length = 141
Score = 36.2 bits (82), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Query: 37 RRGCPDRLIITPNG---GLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLVSMEEVDN 93
+ G PD ++ PNG GLW IE+K G+L Q I+ L +G KV +E
Sbjct: 75 KAGVPDLQLLVPNGLIHGLW-IELKSKAGKLQPSQRLMIQRLEEQGYMCKVCFGADEAIQ 133
Query: 94 FLEELAC 100
+++ C
Sbjct: 134 EIKKYLC 140
>gi|118095660|ref|XP_413768.2| PREDICTED: similar to KIAA1018 protein [Gallus gallus]
Length = 1034
Score = 35.8 bits (81), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 37 RRGCPDRLI-ITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKV 84
R G PD ++ T + +EVK P RLSH+QM + EL++ G V+V
Sbjct: 972 RGGLPDLVVWSTHSNHFKLVEVKGPNDRLSHKQMIWLSELKKLGAAVEV 1020
>gi|220930419|ref|YP_002507328.1| VRR-NUC domain protein [Clostridium cellulolyticum H10]
gi|220000747|gb|ACL77348.1| VRR-NUC domain protein [Clostridium cellulolyticum H10]
Length = 86
Score = 35.8 bits (81), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 28/57 (49%)
Query: 36 GRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLVSMEEVD 92
G G PDR+ + P G + ++E K P + Q ELR G V+V+ S E +
Sbjct: 28 GMSGVPDRICLYPGGKIIFVETKAPNKKPRPLQEKRHNELRSLGFEVRVIDSEAEAN 84
>gi|94990321|ref|YP_598421.1| phage protein [Streptococcus phage 10270.2]
gi|94994244|ref|YP_602342.1| phage protein [Streptococcus phage 10750.2]
gi|94543829|gb|ABF33877.1| phage protein [Streptococcus phage 10270.2]
gi|94547752|gb|ABF37798.1| phage protein [Streptococcus phage 10750.2]
Length = 106
Score = 35.8 bits (81), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 30/53 (56%)
Query: 38 RGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLVSMEE 90
+G D P+G +++IEVK TGR+ +Q +E + RG V V S+E+
Sbjct: 44 KGFCDLFGFKPDGQIFFIEVKNETGRVRPEQKKFMEVMASRGALVGVARSVED 96
>gi|262200538|ref|YP_003271746.1| VRR-NUC domain-containing protein [Gordonia bronchialis DSM 43247]
gi|262083885|gb|ACY19853.1| VRR-NUC domain protein [Gordonia bronchialis DSM 43247]
Length = 131
Score = 35.8 bits (81), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 40/91 (43%), Gaps = 4/91 (4%)
Query: 11 EKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGG----LWWIEVKKPTGRLSH 66
E +E+ LV ++ K + G G PDR+++ + ++EVK+P
Sbjct: 10 ESAIERHLVQRCAEIGVLCLKFTSPGHVGVPDRVLMGHDANDDSVTLFVEVKRPDEAPRP 69
Query: 67 QQMSEIEELRRRGQRVKVLVSMEEVDNFLEE 97
Q++ I +R GQ V S VD + +
Sbjct: 70 SQVAMIRRMRDHGQHAVVADSKASVDALISD 100
>gi|284038012|ref|YP_003387942.1| VRR-NUC domain protein [Spirosoma linguale DSM 74]
gi|283817305|gb|ADB39143.1| VRR-NUC domain protein [Spirosoma linguale DSM 74]
Length = 578
Score = 35.8 bits (81), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 26/48 (54%)
Query: 38 RGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVL 85
RG PD LI G ++EVK PT L QQ+ +E + G + KV+
Sbjct: 525 RGFPDLLIWNDQGDYSFVEVKSPTDHLGPQQLHWLEFFQTIGVQGKVV 572
>gi|94988184|ref|YP_596285.1| phage protein [Streptococcus phage 9429.1]
gi|94990064|ref|YP_598164.1| phage protein [Streptococcus phage 10270.1]
gi|94993976|ref|YP_602074.1| phage protein [Streptococcus phage 10750.1]
gi|94541692|gb|ABF31741.1| phage protein [Streptococcus phage 9429.1]
gi|94543572|gb|ABF33620.1| phage protein [Streptococcus phage 10270.1]
gi|94547484|gb|ABF37530.1| phage protein [Streptococcus phage 10750.1]
Length = 106
Score = 35.8 bits (81), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 38 RGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLVSMEEV 91
+G D P+G +++IEVK TGR+ +Q +E + RG V V S+E+
Sbjct: 44 KGFCDLFGFKPDGQVFFIEVKNETGRVRPEQKKFMEVMASRGALVGVARSVEDA 97
>gi|167630963|ref|YP_001681462.1| hypothetical protein HM1_2942 [Heliobacterium modesticaldum Ice1]
gi|167593703|gb|ABZ85451.1| conserved hypothetical protein [Heliobacterium modesticaldum Ice1]
Length = 93
Score = 35.4 bits (80), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 40/91 (43%)
Query: 11 EKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMS 70
EK +E +L K + K G G PDRL++ P+G L +IE+K R Q
Sbjct: 3 EKTIEIKLKNTVKSMGGIALKLISPGFDGVPDRLVLLPHGKLAFIELKASGKRPRPLQEK 62
Query: 71 EIEELRRRGQRVKVLVSMEEVDNFLEELACT 101
+L G V + ++ L+E+ +
Sbjct: 63 RKRQLEALGFLVFCIDGAGQIGGILDEIQSS 93
>gi|213157759|ref|YP_002320557.1| hypothetical protein AB57_3238 [Acinetobacter baumannii AB0057]
gi|301346503|ref|ZP_07227244.1| hypothetical protein AbauAB0_09664 [Acinetobacter baumannii AB056]
gi|301594702|ref|ZP_07239710.1| hypothetical protein AbauAB059_02795 [Acinetobacter baumannii
AB059]
gi|213056919|gb|ACJ41821.1| hypothetical protein AB57_3238 [Acinetobacter baumannii AB0057]
Length = 141
Score = 35.4 bits (80), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Query: 37 RRGCPDRLIITPNGGL--WWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLVSMEEV 91
+ G PD +I PNG + WIE+K G+L Q I+ L +G KV +E
Sbjct: 75 KAGVPDLQLIVPNGEIHGLWIELKSKKGKLQPSQRLMIQRLEEQGYMCKVCFGADEA 131
>gi|220922463|ref|YP_002497765.1| VRR-NUC domain-containing protein [Methylobacterium nodulans ORS
2060]
gi|219947070|gb|ACL57462.1| VRR-NUC domain protein [Methylobacterium nodulans ORS 2060]
Length = 129
Score = 35.4 bits (80), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 28/52 (53%)
Query: 39 GCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLVSMEE 90
G PD ++ G + IEVK P G LS Q + + LR RG V V+ +E+
Sbjct: 51 GHPDLIVYGRGGRCFLIEVKAPGGSLSASQRAFLPGLRERGFPVHVVDCVED 102
>gi|260556797|ref|ZP_05829015.1| PmgM [Acinetobacter baumannii ATCC 19606]
gi|260410056|gb|EEX03356.1| PmgM [Acinetobacter baumannii ATCC 19606]
Length = 141
Score = 35.4 bits (80), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Query: 37 RRGCPDRLIITPNGGL--WWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLVSMEEV 91
+ G PD +I PNG + WIE+K G+L Q I+ L +G KV +E
Sbjct: 75 KAGVPDLQLIVPNGEIHGLWIELKSKKGKLQPSQRLMIQRLEEQGYMCKVCFGADEA 131
>gi|85059136|ref|YP_454838.1| hypothetical protein SG1158 [Sodalis glossinidius str.
'morsitans']
gi|84779656|dbj|BAE74433.1| hypothetical phage protein [Sodalis glossinidius str.
'morsitans']
Length = 95
Score = 35.4 bits (80), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 25/47 (53%)
Query: 39 GCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVL 85
G PDRL++ P G + ++E K P + Q E + LR G V VL
Sbjct: 40 GVPDRLVVLPGGRVLFVECKAPGQKARPSQRREHDRLRALGGEVIVL 86
>gi|327284500|ref|XP_003226975.1| PREDICTED: fanconi-associated nuclease 1-like [Anolis carolinensis]
Length = 1126
Score = 35.0 bits (79), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 37 RRGCPDRLI-ITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKV 84
R G PD ++ T +G +EVK P RLSH+QM + EL+ G V+V
Sbjct: 1064 RGGLPDLVVWRTEDGQYKVVEVKGPNDRLSHKQMLWLAELQELGAAVEV 1112
>gi|149410836|ref|XP_001509834.1| PREDICTED: similar to KIAA1018 protein [Ornithorhynchus anatinus]
Length = 1036
Score = 35.0 bits (79), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 37 RRGCPDRLI-ITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKV 84
R G PD ++ T + +EVK P RLSH+QM ++EL++ G V+V
Sbjct: 974 RGGLPDLVVWNTQDKRFKLVEVKGPNDRLSHKQMIWLDELQKLGAEVEV 1022
>gi|218885244|ref|YP_002434565.1| hypothetical protein DvMF_0136 [Desulfovibrio vulgaris str.
'Miyazaki F']
gi|218756198|gb|ACL07097.1| conserved hypothetical protein [Desulfovibrio vulgaris str.
'Miyazaki F']
Length = 414
Score = 35.0 bits (79), Expect = 3.6, Method: Composition-based stats.
Identities = 14/45 (31%), Positives = 26/45 (57%)
Query: 28 WVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEI 72
W + A+F ++G P+RL+ T +G W I+ K G + ++E+
Sbjct: 325 WSKPATFALKKGSPNRLVDTESGSEWSIDGKAEAGPMKGAVLNEL 369
>gi|85059144|ref|YP_454846.1| hypothetical protein SG1166 [Sodalis glossinidius str.
'morsitans']
gi|84779664|dbj|BAE74441.1| hypothetical phage protein [Sodalis glossinidius str.
'morsitans']
Length = 102
Score = 35.0 bits (79), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 25/47 (53%)
Query: 39 GCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVL 85
G PDRL++ P G + ++E K P + Q E + LR G V VL
Sbjct: 40 GVPDRLVVLPGGRVLFVECKAPGQKARPSQRREHDRLRALGGEVIVL 86
>gi|220923738|ref|YP_002499040.1| VRR-NUC domain-containing protein [Methylobacterium nodulans ORS
2060]
gi|219948345|gb|ACL58737.1| VRR-NUC domain protein [Methylobacterium nodulans ORS 2060]
Length = 129
Score = 34.7 bits (78), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 43/98 (43%), Gaps = 16/98 (16%)
Query: 9 QTEKDVEKRLVTGA-KKLDCWVRKASFVGRRG---------------CPDRLIITPNGGL 52
+ E+ ++ ++V ++ DC GRRG PD ++ G
Sbjct: 5 RPEQVIQTKIVVAMHRRFDCLCVHVPNGGRRGKLEGVAFKEMGVEAGHPDLIVYGRGGRC 64
Query: 53 WWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLVSMEE 90
+ IEVK P G LS Q + + LR RG V V+ +E+
Sbjct: 65 FLIEVKAPGGSLSASQRAFLPVLRERGFPVHVVDCVED 102
>gi|223933201|ref|ZP_03625192.1| VRR-NUC domain protein [Streptococcus suis 89/1591]
gi|223898131|gb|EEF64501.1| VRR-NUC domain protein [Streptococcus suis 89/1591]
Length = 106
Score = 34.7 bits (78), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 31/59 (52%)
Query: 38 RGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLVSMEEVDNFLE 96
+G D +G +++IEVK GR+ +Q IE +R+ G V S+E+ N +E
Sbjct: 44 KGFSDLFGFRSDGQIFFIEVKNEKGRVRPEQEKFIERMRKFGALAGVARSVEDALNIVE 102
>gi|73951017|ref|XP_536169.2| PREDICTED: similar to C01G5.8 isoform 1 [Canis familiaris]
gi|73951019|ref|XP_856650.1| PREDICTED: similar to C01G5.8 isoform 2 [Canis familiaris]
gi|73951021|ref|XP_856688.1| PREDICTED: similar to C01G5.8 isoform 3 [Canis familiaris]
Length = 1029
Score = 34.3 bits (77), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 37 RRGCPDRLIITPNGG-LWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKV 84
R G PD ++ + +EVK P RLSH+QM ++EL++ G V+V
Sbjct: 967 RGGLPDLVVWNSQSHRVKLVEVKGPNDRLSHKQMIWLDELQKLGAEVEV 1015
>gi|134299060|ref|YP_001112556.1| hypothetical protein Dred_1197 [Desulfotomaculum reducens MI-1]
gi|134051760|gb|ABO49731.1| conserved hypothetical protein [Desulfotomaculum reducens MI-1]
Length = 93
Score = 34.3 bits (77), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 31/63 (49%)
Query: 36 GRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLVSMEEVDNFL 95
G G PDR+++ P G ++E+K P Q+ +EL G V + S ++ F+
Sbjct: 28 GMSGVPDRIVLLPGGRSIFVELKAPGEEPRPLQVKRAKELTELGFEVYCIDSFAAINKFV 87
Query: 96 EEL 98
E+
Sbjct: 88 IEV 90
>gi|163795026|ref|ZP_02188995.1| hypothetical protein BAL199_09123 [alpha proteobacterium BAL199]
gi|159179845|gb|EDP64372.1| hypothetical protein BAL199_09123 [alpha proteobacterium BAL199]
Length = 181
Score = 33.9 bits (76), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 45/91 (49%), Gaps = 19/91 (20%)
Query: 11 EKDVEKRLVTGAKKLDCWVR---KASFVGRRGC--PDRLIITPNGG----LWWIEVKKPT 61
E D+ ++ + GA LD WV + V R+ C ++I+ P GG +WW ++KK T
Sbjct: 66 EPDIWQKSLNGA--LDVWVALGLPSEKVMRQSCGKAGKVIVYPYGGRTAEIWWDKIKKNT 123
Query: 62 GRLSHQQM--------SEIEELRRRGQRVKV 84
R + Q+ E+ +L R R+++
Sbjct: 124 TRFENLQVINFSEKDTGELAKLASRAMRLQI 154
>gi|73951023|ref|XP_856727.1| PREDICTED: similar to C01G5.8 isoform 4 [Canis familiaris]
Length = 733
Score = 33.5 bits (75), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 23/62 (37%)
Query: 40 CPDRLIITPNGGLWW-----------------IEVKKPTGRLSHQQMSEIEELRRRGQRV 82
CPD + G WW +EVK P RLSH+QM ++EL++ G V
Sbjct: 664 CPD------SRGRWWDRLALNLHQHLKRLEPLVEVKGPNDRLSHKQMIWLDELQKLGAEV 717
Query: 83 KV 84
+V
Sbjct: 718 EV 719
>gi|134300454|ref|YP_001113950.1| hypothetical protein Dred_2615 [Desulfotomaculum reducens MI-1]
gi|134053154|gb|ABO51125.1| conserved hypothetical protein [Desulfotomaculum reducens MI-1]
Length = 121
Score = 33.5 bits (75), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 29/54 (53%)
Query: 39 GCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLVSMEEVD 92
G D +T NG ++EVK TGRL +Q + ++ +R+ G V S E+ +
Sbjct: 59 GFSDLFGVTENGKAVFVEVKSATGRLRQEQENFLKRMRQMGAYAGVARSPEDAE 112
>gi|301777496|ref|XP_002924164.1| PREDICTED: coiled-coil domain-containing protein MTMR15-like
[Ailuropoda melanoleuca]
gi|306755801|sp|D2HNY3|FAN1_AILME RecName: Full=Fanconi-associated nuclease 1; AltName:
Full=FANCD2/FANCI-associated nuclease 1; AltName:
Full=Myotubularin-related protein 15
Length = 1025
Score = 33.5 bits (75), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 37 RRGCPDRLIITPNGGLW-WIEVKKPTGRLSHQQMSEIEELRRRGQRVKV 84
R G PD ++ + +EVK P RLSH+QM ++EL++ G V+V
Sbjct: 963 RGGLPDLVVWNSQSRHFKLVEVKGPNDRLSHKQMLWLDELQKLGADVEV 1011
>gi|281341974|gb|EFB17558.1| hypothetical protein PANDA_013441 [Ailuropoda melanoleuca]
Length = 1026
Score = 33.5 bits (75), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 37 RRGCPDRLIITPNGGLW-WIEVKKPTGRLSHQQMSEIEELRRRGQRVKV 84
R G PD ++ + +EVK P RLSH+QM ++EL++ G V+V
Sbjct: 964 RGGLPDLVVWNSQSRHFKLVEVKGPNDRLSHKQMLWLDELQKLGADVEV 1012
Searching..................................................done
Results from round 2
>gi|255957557|dbj|BAH96619.1| VRR-NUC domain protein [Candidatus Liberibacter asiaticus]
gi|317120742|gb|ADV02564.1| endonuclease [Liberibacter phage SC2]
gi|317120803|gb|ADV02624.1| endonuclease [Liberibacter phage SC2]
Length = 103
Score = 149 bits (377), Expect = 1e-34, Method: Composition-based stats.
Identities = 102/103 (99%), Positives = 103/103 (100%)
Query: 1 MSFYSFHYQTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKP 60
MSFYSFHYQTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKP
Sbjct: 1 MSFYSFHYQTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKP 60
Query: 61 TGRLSHQQMSEIEELRRRGQRVKVLVSMEEVDNFLEELACTLY 103
TGRLSHQQMSEIEELRRRGQRVKVL+SMEEVDNFLEELACTLY
Sbjct: 61 TGRLSHQQMSEIEELRRRGQRVKVLISMEEVDNFLEELACTLY 103
>gi|254780128|ref|YP_003064541.1| VRR-NUC domain-containing protein [Candidatus Liberibacter
asiaticus str. psy62]
gi|254039805|gb|ACT56601.1| VRR-NUC domain-containing protein [Candidatus Liberibacter
asiaticus str. psy62]
gi|317120699|gb|ADV02522.1| endonuclease [Liberibacter phage SC1]
gi|317120843|gb|ADV02664.1| endonuclease [Liberibacter phage SC1]
Length = 103
Score = 149 bits (377), Expect = 1e-34, Method: Composition-based stats.
Identities = 103/103 (100%), Positives = 103/103 (100%)
Query: 1 MSFYSFHYQTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKP 60
MSFYSFHYQTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKP
Sbjct: 1 MSFYSFHYQTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKP 60
Query: 61 TGRLSHQQMSEIEELRRRGQRVKVLVSMEEVDNFLEELACTLY 103
TGRLSHQQMSEIEELRRRGQRVKVLVSMEEVDNFLEELACTLY
Sbjct: 61 TGRLSHQQMSEIEELRRRGQRVKVLVSMEEVDNFLEELACTLY 103
>gi|255957592|dbj|BAH96647.1| VRR-NUC domain protein [Candidatus Liberibacter asiaticus]
Length = 103
Score = 148 bits (374), Expect = 2e-34, Method: Composition-based stats.
Identities = 101/103 (98%), Positives = 101/103 (98%)
Query: 1 MSFYSFHYQTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKP 60
MSFYSFHYQTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNG LWWIEVKKP
Sbjct: 1 MSFYSFHYQTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGRLWWIEVKKP 60
Query: 61 TGRLSHQQMSEIEELRRRGQRVKVLVSMEEVDNFLEELACTLY 103
TGRLSHQQMSEIEELRRRGQRVKVLVSMEEVDNFLEELACT Y
Sbjct: 61 TGRLSHQQMSEIEELRRRGQRVKVLVSMEEVDNFLEELACTSY 103
>gi|255957612|dbj|BAH96663.1| VRR-NUC domain protein [Candidatus Liberibacter asiaticus]
Length = 103
Score = 147 bits (372), Expect = 4e-34, Method: Composition-based stats.
Identities = 101/103 (98%), Positives = 102/103 (99%)
Query: 1 MSFYSFHYQTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKP 60
MSFYSFHYQTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKP
Sbjct: 1 MSFYSFHYQTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKP 60
Query: 61 TGRLSHQQMSEIEELRRRGQRVKVLVSMEEVDNFLEELACTLY 103
TGRLSHQQMSEIEELRRRGQRVKVL+SMEEVDNFLEELACT Y
Sbjct: 61 TGRLSHQQMSEIEELRRRGQRVKVLISMEEVDNFLEELACTSY 103
>gi|255957617|dbj|BAH96667.1| VRR-NUC domain protein [Candidatus Liberibacter asiaticus]
gi|255957627|dbj|BAH96675.1| VRR-NUC domain protein [Candidatus Liberibacter asiaticus]
Length = 103
Score = 147 bits (372), Expect = 5e-34, Method: Composition-based stats.
Identities = 102/103 (99%), Positives = 102/103 (99%)
Query: 1 MSFYSFHYQTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKP 60
MSFYSFHYQTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKP
Sbjct: 1 MSFYSFHYQTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKP 60
Query: 61 TGRLSHQQMSEIEELRRRGQRVKVLVSMEEVDNFLEELACTLY 103
TGRLSHQQMSEIEELRRRGQRVKVLVSMEEVDNFLEELACT Y
Sbjct: 61 TGRLSHQQMSEIEELRRRGQRVKVLVSMEEVDNFLEELACTSY 103
>gi|255957602|dbj|BAH96655.1| VRR-NUC domain protein [Candidatus Liberibacter asiaticus]
gi|255957632|dbj|BAH96679.1| VRR-NUC domain protein [Candidatus Liberibacter asiaticus]
gi|255957637|dbj|BAH96683.1| VRR-NUC domain protein [Candidatus Liberibacter asiaticus]
gi|255957642|dbj|BAH96687.1| VRR-NUC domain protein [Candidatus Liberibacter asiaticus]
gi|255957647|dbj|BAH96691.1| VRR-NUC domain protein [Candidatus Liberibacter asiaticus]
gi|255957677|dbj|BAH96715.1| VRR-NUC domain protein [Candidatus Liberibacter asiaticus]
gi|255957682|dbj|BAH96719.1| VRR-NUC domain protein [Candidatus Liberibacter asiaticus]
gi|255957687|dbj|BAH96723.1| VRR-NUC domain protein [Candidatus Liberibacter asiaticus]
Length = 103
Score = 147 bits (371), Expect = 7e-34, Method: Composition-based stats.
Identities = 100/103 (97%), Positives = 102/103 (99%)
Query: 1 MSFYSFHYQTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKP 60
MSFYSFHYQTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKP
Sbjct: 1 MSFYSFHYQTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKP 60
Query: 61 TGRLSHQQMSEIEELRRRGQRVKVLVSMEEVDNFLEELACTLY 103
TGRLSHQQMSEIEELRRRGQRVKVL+S+EEVDNFLEELACT Y
Sbjct: 61 TGRLSHQQMSEIEELRRRGQRVKVLISIEEVDNFLEELACTSY 103
>gi|255957622|dbj|BAH96671.1| VRR-NUC domain protein [Candidatus Liberibacter asiaticus]
gi|255957652|dbj|BAH96695.1| VRR-NUC domain protein [Candidatus Liberibacter asiaticus]
gi|255957657|dbj|BAH96699.1| VRR-NUC domain protein [Candidatus Liberibacter asiaticus]
gi|255957672|dbj|BAH96711.1| VRR-NUC domain protein [Candidatus Liberibacter asiaticus]
Length = 103
Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats.
Identities = 101/103 (98%), Positives = 102/103 (99%)
Query: 1 MSFYSFHYQTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKP 60
MSFYSFHYQTEKDVEKRLVTGA+KLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKP
Sbjct: 1 MSFYSFHYQTEKDVEKRLVTGAEKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKP 60
Query: 61 TGRLSHQQMSEIEELRRRGQRVKVLVSMEEVDNFLEELACTLY 103
TGRLSHQQMSEIEELRRRGQRVKVLVSMEEVDNFLEELACT Y
Sbjct: 61 TGRLSHQQMSEIEELRRRGQRVKVLVSMEEVDNFLEELACTSY 103
>gi|255957662|dbj|BAH96703.1| VRR-NUC domain protein [Candidatus Liberibacter asiaticus]
gi|255957667|dbj|BAH96707.1| VRR-NUC domain protein [Candidatus Liberibacter asiaticus]
Length = 103
Score = 145 bits (367), Expect = 2e-33, Method: Composition-based stats.
Identities = 100/103 (97%), Positives = 102/103 (99%)
Query: 1 MSFYSFHYQTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKP 60
MSFYSFHYQTEKDVEKRLVTGA+KLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKP
Sbjct: 1 MSFYSFHYQTEKDVEKRLVTGAEKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKP 60
Query: 61 TGRLSHQQMSEIEELRRRGQRVKVLVSMEEVDNFLEELACTLY 103
TGRLSHQQMSEIEELRRRGQRVKVLVS+EEVDNFLEELACT Y
Sbjct: 61 TGRLSHQQMSEIEELRRRGQRVKVLVSIEEVDNFLEELACTSY 103
>gi|255957562|dbj|BAH96623.1| VRR-NUC domain protein [Candidatus Liberibacter asiaticus]
gi|255957567|dbj|BAH96627.1| VRR-NUC domain protein [Candidatus Liberibacter asiaticus]
gi|255957572|dbj|BAH96631.1| VRR-NUC domain protein [Candidatus Liberibacter asiaticus]
gi|255957577|dbj|BAH96635.1| VRR-NUC domain protein [Candidatus Liberibacter asiaticus]
gi|255957582|dbj|BAH96639.1| VRR-NUC domain protein [Candidatus Liberibacter asiaticus]
gi|255957587|dbj|BAH96643.1| VRR-NUC domain protein [Candidatus Liberibacter asiaticus]
gi|255957597|dbj|BAH96651.1| VRR-NUC domain protein [Candidatus Liberibacter asiaticus]
gi|255957607|dbj|BAH96659.1| VRR-NUC domain protein [Candidatus Liberibacter asiaticus]
Length = 103
Score = 144 bits (364), Expect = 4e-33, Method: Composition-based stats.
Identities = 100/103 (97%), Positives = 101/103 (98%)
Query: 1 MSFYSFHYQTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKP 60
MSFYSFHYQTEKDVEKRLVTGA+KLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKP
Sbjct: 1 MSFYSFHYQTEKDVEKRLVTGAEKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKP 60
Query: 61 TGRLSHQQMSEIEELRRRGQRVKVLVSMEEVDNFLEELACTLY 103
TGRLSHQQMSEIEEL RRGQRVKVLVSMEEVDNFLEELACT Y
Sbjct: 61 TGRLSHQQMSEIEELLRRGQRVKVLVSMEEVDNFLEELACTSY 103
>gi|167746057|ref|ZP_02418184.1| hypothetical protein ANACAC_00752 [Anaerostipes caccae DSM 14662]
gi|167654572|gb|EDR98701.1| hypothetical protein ANACAC_00752 [Anaerostipes caccae DSM 14662]
Length = 93
Score = 137 bits (347), Expect = 3e-31, Method: Composition-based stats.
Identities = 30/93 (32%), Positives = 45/93 (48%)
Query: 9 QTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQ 68
EK++EKRLV KK K G G PDR+I+ P G + + E+K P + Q
Sbjct: 1 MREKEIEKRLVAEVKKNGGICPKFVSPGYAGMPDRIILLPKGKIAFAELKAPGQKPRPLQ 60
Query: 69 MSEIEELRRRGQRVKVLVSMEEVDNFLEELACT 101
+ + L G RV V+ E++ + E+ T
Sbjct: 61 AARHKILMGLGFRVYVIDGTEQIGGVIREIQST 93
>gi|302876788|ref|YP_003845421.1| VRR-NUC domain-containing protein [Clostridium cellulovorans
743B]
gi|307687469|ref|ZP_07629915.1| VRR-NUC domain-containing protein [Clostridium cellulovorans
743B]
gi|302579645|gb|ADL53657.1| VRR-NUC domain-containing protein [Clostridium cellulovorans
743B]
Length = 92
Score = 137 bits (347), Expect = 4e-31, Method: Composition-based stats.
Identities = 33/90 (36%), Positives = 48/90 (53%)
Query: 9 QTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQ 68
EK +EK+L+T KK K G G PDR+++ P G ++EVK P + Q
Sbjct: 1 MREKQIEKKLITEVKKRGGICPKWVSPGFDGVPDRIVLLPGGKFAFVEVKAPGEKPRPLQ 60
Query: 69 MSEIEELRRRGQRVKVLVSMEEVDNFLEEL 98
+S + LRR G RV VL M ++ L+E+
Sbjct: 61 VSRHKLLRRLGFRVYVLDDMSQIGGILDEI 90
>gi|57234141|ref|YP_181812.1| hypothetical protein DET1097 [Dehalococcoides ethenogenes 195]
gi|57224589|gb|AAW39646.1| conserved hypothetical protein [Dehalococcoides ethenogenes 195]
Length = 95
Score = 137 bits (345), Expect = 7e-31, Method: Composition-based stats.
Identities = 28/91 (30%), Positives = 46/91 (50%)
Query: 11 EKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMS 70
EK +EK+L+ K + K G G PDRL++ P G + + E+K P + Q++
Sbjct: 5 EKTIEKKLINAVKSMGGIAPKFVSPGFDGMPDRLVLLPGGVMAFAELKAPGKKPRPLQLA 64
Query: 71 EIEELRRRGQRVKVLVSMEEVDNFLEELACT 101
LR G +V V+ + ++ L+EL T
Sbjct: 65 RHRLLRELGFKVYVIDDISQIGGMLDELHAT 95
>gi|323693307|ref|ZP_08107525.1| VRR-NUC domain-containing protein [Clostridium symbiosum WAL-14673]
gi|323502790|gb|EGB18634.1| VRR-NUC domain-containing protein [Clostridium symbiosum WAL-14673]
Length = 93
Score = 136 bits (344), Expect = 9e-31, Method: Composition-based stats.
Identities = 30/93 (32%), Positives = 45/93 (48%)
Query: 9 QTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQ 68
EK +EK+L T KK K G PDR+I+ P+G + E+K P Q
Sbjct: 1 MLEKTIEKKLTTAVKKAGGIAPKFVSPSFAGMPDRIILLPDGKFAFAELKAPGESPRPLQ 60
Query: 69 MSEIEELRRRGQRVKVLVSMEEVDNFLEELACT 101
+ LR G RV V+ S+E++ ++EL +
Sbjct: 61 KARHRLLRSLGFRVYVIDSIEQIGGMIDELRTS 93
>gi|293401138|ref|ZP_06645282.1| hypothetical protein HMPREF0863_01422 [Erysipelotrichaceae
bacterium 5_2_54FAA]
gi|291305264|gb|EFE46509.1| hypothetical protein HMPREF0863_01422 [Erysipelotrichaceae
bacterium 5_2_54FAA]
Length = 95
Score = 135 bits (340), Expect = 2e-30, Method: Composition-based stats.
Identities = 29/93 (31%), Positives = 46/93 (49%)
Query: 9 QTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQ 68
EK++E +L T +K K RG PDRL++ P+G ++E+K P Q
Sbjct: 3 MLEKNIENKLTTAVEKAGGIAPKFVSPSLRGMPDRLVLLPDGVFAFVELKAPGESPRPLQ 62
Query: 69 MSEIEELRRRGQRVKVLVSMEEVDNFLEELACT 101
+ +LR G +V V+ S++ + L EL T
Sbjct: 63 RARHRKLRSLGFKVYVIDSIDGIGGMLHELLST 95
>gi|320140664|gb|EFW32518.1| VRR-NUC domain protein [Staphylococcus aureus subsp. aureus
MRSA131]
gi|320142764|gb|EFW34567.1| VRR-NUC domain protein [Staphylococcus aureus subsp. aureus
MRSA177]
Length = 116
Score = 135 bits (340), Expect = 2e-30, Method: Composition-based stats.
Identities = 32/95 (33%), Positives = 48/95 (50%)
Query: 8 YQTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQ 67
Y E +EK LV KL+ K G RG PDR+II P G +++E+K+ G+L
Sbjct: 20 YMKESTLEKYLVKEISKLNGLCLKWVAPGTRGVPDRIIIMPEGKTYFVEMKQEKGKLHPL 79
Query: 68 QMSEIEELRRRGQRVKVLVSMEEVDNFLEELACTL 102
Q + R +V VL + E+V+ F+ + T
Sbjct: 80 QKYVHRQFENRDHKVYVLWNKEQVNTFIRMVGGTF 114
>gi|219855698|ref|YP_002472820.1| hypothetical protein CKR_2355 [Clostridium kluyveri NBRC 12016]
gi|219569422|dbj|BAH07406.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 106
Score = 134 bits (339), Expect = 3e-30, Method: Composition-based stats.
Identities = 27/94 (28%), Positives = 51/94 (54%)
Query: 8 YQTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQ 67
+ EK +EK+LV KK+ K G G PDRL++ P+G + ++E+K P +
Sbjct: 13 FMLEKYIEKKLVAEVKKMGGIAAKFVSPGLDGMPDRLVLLPHGKMAFVELKAPGKKPRLL 72
Query: 68 QMSEIEELRRRGQRVKVLVSMEEVDNFLEELACT 101
Q+ I++L++ G V+ ++++ L E+ +
Sbjct: 73 QIRRIKQLQKLGFACYVIDDVKQIGGILGEIQSS 106
>gi|313898077|ref|ZP_07831616.1| VRR-NUC domain protein [Clostridium sp. HGF2]
gi|312957105|gb|EFR38734.1| VRR-NUC domain protein [Clostridium sp. HGF2]
Length = 93
Score = 134 bits (338), Expect = 4e-30, Method: Composition-based stats.
Identities = 30/93 (32%), Positives = 44/93 (47%)
Query: 9 QTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQ 68
EK +EK+L T KK K G PDRLI+ P+G + E+K P Q
Sbjct: 1 MLEKTIEKKLTTAVKKAGGIAPKFVSPSFAGMPDRLILLPDGKFAFAELKAPGESPRPLQ 60
Query: 69 MSEIEELRRRGQRVKVLVSMEEVDNFLEELACT 101
+ L G RV V+ S+E++ ++EL +
Sbjct: 61 KARHRLLHSLGFRVYVIDSVEQIGGMIDELRTS 93
>gi|268610657|ref|ZP_06144384.1| VRR_NUC domain-containing protein [Ruminococcus flavefaciens FD-1]
Length = 93
Score = 133 bits (336), Expect = 7e-30, Method: Composition-based stats.
Identities = 27/93 (29%), Positives = 45/93 (48%)
Query: 9 QTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQ 68
E ++E +LV K K G G PDR+++ +G + ++EVK P + Q
Sbjct: 1 MRENEIETKLVKAVKARGGVCWKFVSPGTAGVPDRIVLMQSGRIAFVEVKAPGEKPRPLQ 60
Query: 69 MSEIEELRRRGQRVKVLVSMEEVDNFLEELACT 101
I+ LRR G +V VL E++ ++E+
Sbjct: 61 RVRIKLLRRLGFKVYVLDGAEQIGGIIDEIQSA 93
>gi|317501094|ref|ZP_07959300.1| VRR-NUC domain-containing protein [Lachnospiraceae bacterium
8_1_57FAA]
gi|316897481|gb|EFV19546.1| VRR-NUC domain-containing protein [Lachnospiraceae bacterium
8_1_57FAA]
Length = 93
Score = 132 bits (334), Expect = 1e-29, Method: Composition-based stats.
Identities = 30/93 (32%), Positives = 43/93 (46%)
Query: 9 QTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQ 68
EK +E +L KK K G PDRLI+ P+G + + E+K P + Q
Sbjct: 1 MIEKQIENKLTMAVKKNGGIALKLVCPSFAGMPDRLILLPDGHIGFAELKAPGKKPRPLQ 60
Query: 69 MSEIEELRRRGQRVKVLVSMEEVDNFLEELACT 101
+S LR G RV V+ E++ + EL T
Sbjct: 61 LSRHRLLRELGYRVYVIDDPEQIGGMINELQST 93
>gi|167757892|ref|ZP_02430019.1| hypothetical protein CLOSCI_00223 [Clostridium scindens ATCC 35704]
gi|167664546|gb|EDS08676.1| hypothetical protein CLOSCI_00223 [Clostridium scindens ATCC 35704]
Length = 120
Score = 132 bits (333), Expect = 1e-29, Method: Composition-based stats.
Identities = 29/92 (31%), Positives = 48/92 (52%)
Query: 9 QTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQ 68
EK +E++LV +K K + G G PDRL++ P+G + + E+K P R Q
Sbjct: 26 MREKQIEQKLVREVRKRGGICPKFTSPGFAGMPDRLLLLPHGRMAFAELKAPGCRPRPLQ 85
Query: 69 MSEIEELRRRGQRVKVLVSMEEVDNFLEELAC 100
+ + L R G RV V+ S E+++ + E+
Sbjct: 86 EARHKLLARLGFRVYVIDSPEQIEKIMAEMGG 117
>gi|48697220|ref|YP_024950.1| hypothetical protein BcepC6B_gp30 [Burkholderia phage BcepC6B]
gi|47779026|gb|AAT38389.1| gp30 [Burkholderia phage BcepC6B]
Length = 280
Score = 132 bits (332), Expect = 2e-29, Method: Composition-based stats.
Identities = 31/90 (34%), Positives = 46/90 (51%)
Query: 8 YQTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQ 67
EK VE LV + K S R PDR++I P ++++E+K+P + +
Sbjct: 15 IMLEKTVETYLVDRVRAAGGDAYKFSSPARVSVPDRIVIFPPARVYFVELKRPGNKPTKG 74
Query: 68 QMSEIEELRRRGQRVKVLVSMEEVDNFLEE 97
Q+ E E LR G V+V+ S E VD F+ E
Sbjct: 75 QLREHERLRALGCDVRVIDSREAVDAFVLE 104
>gi|317132763|ref|YP_004092077.1| VRR-NUC domain-containing protein [Ethanoligenens harbinense
YUAN-3]
gi|315470742|gb|ADU27346.1| VRR-NUC domain-containing protein [Ethanoligenens harbinense
YUAN-3]
Length = 95
Score = 132 bits (332), Expect = 2e-29, Method: Composition-based stats.
Identities = 26/94 (27%), Positives = 49/94 (52%)
Query: 9 QTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQ 68
++EK +E++L + K+ K G G PDR+I+ P + + E+K P + Q
Sbjct: 2 RSEKQIEQKLASEVKRRGGIAPKFVSPGFDGMPDRIILLPGARIAFAELKAPGKKPRRLQ 61
Query: 69 MSEIEELRRRGQRVKVLVSMEEVDNFLEELACTL 102
+ LR+ G RV V+ + E++ ++E+ +L
Sbjct: 62 YARHRLLRKLGFRVYVIDNPEQIGGVIDEIENSL 95
>gi|282911094|ref|ZP_06318896.1| gp33 [Staphylococcus aureus subsp. aureus WBG10049]
gi|282324789|gb|EFB55099.1| gp33 [Staphylococcus aureus subsp. aureus WBG10049]
Length = 96
Score = 131 bits (331), Expect = 2e-29, Method: Composition-based stats.
Identities = 32/94 (34%), Positives = 46/94 (48%)
Query: 9 QTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQ 68
E +EK LV KL+ K G RG PDR+II P G +++E+K+ G+L Q
Sbjct: 1 MKESTLEKYLVKEITKLNGLCLKWVAPGTRGVPDRIIIMPEGKTYFVEMKQEKGKLHPLQ 60
Query: 69 MSEIEELRRRGQRVKVLVSMEEVDNFLEELACTL 102
+ R V VL + E+VD F+ + T
Sbjct: 61 KYVHRQFENRDHTVYVLWNKEQVDEFIRMVGGTF 94
>gi|49483701|ref|YP_040925.1| hypothetical protein SAR1524 [Staphylococcus aureus subsp. aureus
MRSA252]
gi|49485833|ref|YP_043054.1| hypothetical protein SAS0927 [Staphylococcus aureus subsp. aureus
MSSA476]
gi|66395630|ref|YP_239996.1| ORF045 [Staphylococcus phage 3A]
gi|209363582|ref|YP_002268000.1| hypothetical protein phi2958PVL_gp30 [Staphylococcus phage
phi2958PVL]
gi|258445561|ref|ZP_05693743.1| gp33 [Staphylococcus aureus A6300]
gi|258455569|ref|ZP_05703526.1| conserved hypothetical protein [Staphylococcus aureus A5937]
gi|262052906|ref|ZP_06025089.1| hypothetical protein SA930_0247 [Staphylococcus aureus 930918-3]
gi|282921766|ref|ZP_06329483.1| conserved hypothetical protein [Staphylococcus aureus A9765]
gi|295428025|ref|ZP_06820657.1| predicted protein [Staphylococcus aureus subsp. aureus EMRSA16]
gi|297591004|ref|ZP_06949642.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
MN8]
gi|49241830|emb|CAG40522.1| hypothetical phage protein [Staphylococcus aureus subsp. aureus
MRSA252]
gi|49244276|emb|CAG42703.1| hypothetical phage protein [Staphylococcus aureus subsp. aureus
MSSA476]
gi|62635976|gb|AAX91087.1| ORF045 [Staphylococcus phage 3A]
gi|208973083|dbj|BAG74399.1| hypothetical protein [Staphylococcus phage phi2958PVL]
gi|257855608|gb|EEV78541.1| gp33 [Staphylococcus aureus A6300]
gi|257862257|gb|EEV85028.1| conserved hypothetical protein [Staphylococcus aureus A5937]
gi|259159213|gb|EEW44274.1| hypothetical protein SA930_0247 [Staphylococcus aureus 930918-3]
gi|282594028|gb|EFB99017.1| conserved hypothetical protein [Staphylococcus aureus A9765]
gi|295128383|gb|EFG58017.1| predicted protein [Staphylococcus aureus subsp. aureus EMRSA16]
gi|297575890|gb|EFH94606.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
MN8]
gi|315128427|gb|EFT84435.1| hypothetical protein CGSSa03_13292 [Staphylococcus aureus subsp.
aureus CGS03]
Length = 96
Score = 131 bits (331), Expect = 3e-29, Method: Composition-based stats.
Identities = 31/94 (32%), Positives = 46/94 (48%)
Query: 9 QTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQ 68
E +EK LV KL+ K G RG PDR+II P G +++E+K+ G+L Q
Sbjct: 1 MKESTLEKYLVKEITKLNGLCLKWVAPGTRGVPDRIIIMPEGKTYFVEMKQEKGKLHPLQ 60
Query: 69 MSEIEELRRRGQRVKVLVSMEEVDNFLEELACTL 102
+ R V VL + E+V+ F+ + T
Sbjct: 61 KYVHRQFENRDHTVYVLWNKEQVNTFIRMVGGTF 94
>gi|220930214|ref|YP_002507123.1| VRR-NUC domain protein [Clostridium cellulolyticum H10]
gi|220000542|gb|ACL77143.1| VRR-NUC domain protein [Clostridium cellulolyticum H10]
Length = 93
Score = 131 bits (330), Expect = 3e-29, Method: Composition-based stats.
Identities = 27/93 (29%), Positives = 50/93 (53%)
Query: 9 QTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQ 68
EK +EK+LV KK+ K G G PDRL++ P+G + ++E+K P + Q
Sbjct: 1 MLEKYIEKKLVAEVKKMGGIAAKFVSPGLDGMPDRLVLLPHGKMAFVELKAPGKKPRLLQ 60
Query: 69 MSEIEELRRRGQRVKVLVSMEEVDNFLEELACT 101
+ I++L++ G V+ ++++ L E+ +
Sbjct: 61 IRRIKQLQKLGFTCYVIDDVKQIGGVLGEIQSS 93
>gi|257428239|ref|ZP_05604637.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
65-1322]
gi|257432447|ref|ZP_05608810.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
E1410]
gi|257275080|gb|EEV06567.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
65-1322]
gi|257283326|gb|EEV13458.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
E1410]
Length = 96
Score = 131 bits (330), Expect = 3e-29, Method: Composition-based stats.
Identities = 31/94 (32%), Positives = 46/94 (48%)
Query: 9 QTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQ 68
E +EK LV KL+ K G RG PDR+II P G +++E+K+ G+L Q
Sbjct: 1 MKESTLEKYLVKEITKLNGLCLKWVAPGTRGVPDRIIIMPEGKTFFVEMKQEKGKLHPLQ 60
Query: 69 MSEIEELRRRGQRVKVLVSMEEVDNFLEELACTL 102
+ R V VL + E+V+ F+ + T
Sbjct: 61 KYVHRQFENRDHTVYVLWNKEQVNTFIRMVGGTF 94
>gi|29028642|ref|NP_803331.1| phi related protein [Staphylococcus phage phi 12]
gi|66395698|ref|YP_240069.1| ORF044 [Staphylococcus phage 47]
gi|88195256|ref|YP_500059.1| phi related protein [Staphylococcus aureus subsp. aureus NCTC 8325]
gi|148267488|ref|YP_001246431.1| VRR-NUC [Staphylococcus aureus subsp. aureus JH9]
gi|150393542|ref|YP_001316217.1| VRR-NUC domain-containing protein [Staphylococcus aureus subsp.
aureus JH1]
gi|253315480|ref|ZP_04838693.1| VRR-NUC domain-containing protein [Staphylococcus aureus subsp.
aureus str. CF-Marseille]
gi|258420305|ref|ZP_05683252.1| VRR-NUC domain-containing protein [Staphylococcus aureus A9719]
gi|258427144|ref|ZP_05688066.1| VRR-NUC domain-containing protein [Staphylococcus aureus A9299]
gi|258448844|ref|ZP_05696954.1| VRR-NUC domain-containing protein [Staphylococcus aureus A6224]
gi|282905865|ref|ZP_06313720.1| phi family protein [Staphylococcus aureus subsp. aureus Btn1260]
gi|282919230|ref|ZP_06326965.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
C427]
gi|282927342|ref|ZP_06334960.1| phi protein [Staphylococcus aureus A10102]
gi|284024516|ref|ZP_06378914.1| VRR-NUC domain-containing protein [Staphylococcus aureus subsp.
aureus 132]
gi|295407566|ref|ZP_06817359.1| phage protein [Staphylococcus aureus A8819]
gi|296276323|ref|ZP_06858830.1| VRR-NUC domain-containing protein [Staphylococcus aureus subsp.
aureus MR1]
gi|297207822|ref|ZP_06924256.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
ATCC 51811]
gi|297246596|ref|ZP_06930429.1| phi like protein [Staphylococcus aureus A8796]
gi|18920566|gb|AAL82306.1| phi related protein [Staphylococcus phage phi 12]
gi|62636122|gb|AAX91233.1| ORF044 [Staphylococcus phage 47]
gi|87202814|gb|ABD30624.1| phi related protein [Staphylococcus aureus subsp. aureus NCTC 8325]
gi|147740557|gb|ABQ48855.1| VRR-NUC [Staphylococcus aureus subsp. aureus JH9]
gi|149945994|gb|ABR51930.1| VRR-NUC domain protein [Staphylococcus aureus subsp. aureus JH1]
gi|257843730|gb|EEV68132.1| VRR-NUC domain-containing protein [Staphylococcus aureus A9719]
gi|257849922|gb|EEV73881.1| VRR-NUC domain-containing protein [Staphylococcus aureus A9299]
gi|257857881|gb|EEV80772.1| VRR-NUC domain-containing protein [Staphylococcus aureus A6224]
gi|282317040|gb|EFB47414.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
C427]
gi|282331157|gb|EFB60671.1| phi family protein [Staphylococcus aureus subsp. aureus Btn1260]
gi|282590666|gb|EFB95742.1| phi protein [Staphylococcus aureus A10102]
gi|283469595|emb|CAQ48806.1| phi related protein [Staphylococcus aureus subsp. aureus ST398]
gi|283470736|emb|CAQ49947.1| phi related protein [Staphylococcus aureus subsp. aureus ST398]
gi|294967585|gb|EFG43621.1| phage protein [Staphylococcus aureus A8819]
gi|296887538|gb|EFH26437.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
ATCC 51811]
gi|297176554|gb|EFH35819.1| phi like protein [Staphylococcus aureus A8796]
gi|298693628|gb|ADI96850.1| hypothetical phage protein [Staphylococcus aureus subsp. aureus
ED133]
gi|302333126|gb|ADL23319.1| VRR-NUC domain [Staphylococcus aureus subsp. aureus JKD6159]
gi|312438076|gb|ADQ77147.1| phi phage protein [Staphylococcus aureus subsp. aureus TCH60]
gi|323438428|gb|EGA96183.1| hypothetical protein SAO11_2724 [Staphylococcus aureus O11]
gi|323441316|gb|EGA98981.1| hypothetical protein SAO46_2726 [Staphylococcus aureus O46]
gi|329729402|gb|EGG65807.1| VRR-NUC domain protein [Staphylococcus aureus subsp. aureus 21189]
gi|329730601|gb|EGG66986.1| VRR-NUC domain protein [Staphylococcus aureus subsp. aureus 21193]
Length = 96
Score = 131 bits (330), Expect = 3e-29, Method: Composition-based stats.
Identities = 31/94 (32%), Positives = 47/94 (50%)
Query: 9 QTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQ 68
E +EK LV KL+ K G RG PDR+II P G +++E+K+ G+L Q
Sbjct: 1 MKESTLEKYLVKEITKLNGLCLKWVAPGTRGVPDRIIIMPEGKTYFVEMKQEKGKLHPLQ 60
Query: 69 MSEIEELRRRGQRVKVLVSMEEVDNFLEELACTL 102
+ R +V VL + E+V+ F+ + T
Sbjct: 61 KYVHRQFENRDHKVYVLWNKEQVNTFIRMVGGTF 94
>gi|153955275|ref|YP_001396040.1| hypothetical protein CKL_2657 [Clostridium kluyveri DSM 555]
gi|146348133|gb|EDK34669.1| Phage-related protein [Clostridium kluyveri DSM 555]
Length = 93
Score = 131 bits (330), Expect = 3e-29, Method: Composition-based stats.
Identities = 27/93 (29%), Positives = 50/93 (53%)
Query: 9 QTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQ 68
EK +EK+LV KK+ K G G PDRL++ P+G + ++E+K P + Q
Sbjct: 1 MLEKYIEKKLVAEVKKMGGIAAKFVSPGLDGMPDRLVLLPHGKMAFVELKAPGKKPRLLQ 60
Query: 69 MSEIEELRRRGQRVKVLVSMEEVDNFLEELACT 101
+ I++L++ G V+ ++++ L E+ +
Sbjct: 61 IRRIKQLQKLGFACYVIDDVKQIGGILGEIQSS 93
>gi|256617083|ref|ZP_05473929.1| conserved hypothetical protein [Enterococcus faecalis ATCC 4200]
gi|257088354|ref|ZP_05582715.1| conserved hypothetical protein [Enterococcus faecalis D6]
gi|256596610|gb|EEU15786.1| conserved hypothetical protein [Enterococcus faecalis ATCC 4200]
gi|256996384|gb|EEU83686.1| conserved hypothetical protein [Enterococcus faecalis D6]
Length = 95
Score = 131 bits (330), Expect = 3e-29, Method: Composition-based stats.
Identities = 28/92 (30%), Positives = 45/92 (48%)
Query: 9 QTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQ 68
EK VE+ LV K K G G PDRL++ PNG + ++EVK P + Q
Sbjct: 1 MREKQVEQALVKAVKARGGICPKFVSPGLSGVPDRLVLMPNGKIAFVEVKAPKKKPRALQ 60
Query: 69 MSEIEELRRRGQRVKVLVSMEEVDNFLEELAC 100
+ +++L G + VL +E++ + E+
Sbjct: 61 LYRMKQLTDLGFKCFVLDEVEQIPALIGEIGG 92
>gi|87161853|ref|YP_494106.1| hypothetical protein SAUSA300_1409 [Staphylococcus aureus subsp.
aureus USA300_FPR3757]
gi|161509686|ref|YP_001575345.1| hypothetical protein USA300HOU_1457 [Staphylococcus aureus subsp.
aureus USA300_TCH1516]
gi|294848485|ref|ZP_06789231.1| hypothetical protein SKAG_00548 [Staphylococcus aureus A9754]
gi|300911908|ref|ZP_07129351.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
TCH70]
gi|87127827|gb|ABD22341.1| conserved hypothetical phage protein [Staphylococcus aureus subsp.
aureus USA300_FPR3757]
gi|160368495|gb|ABX29466.1| hypothetical bacteriophage protein [Staphylococcus aureus subsp.
aureus USA300_TCH1516]
gi|294824511|gb|EFG40934.1| hypothetical protein SKAG_00548 [Staphylococcus aureus A9754]
gi|300886154|gb|EFK81356.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
TCH70]
gi|315197729|gb|EFU28063.1| hypothetical bacteriophage protein [Staphylococcus aureus subsp.
aureus CGS01]
Length = 96
Score = 131 bits (330), Expect = 3e-29, Method: Composition-based stats.
Identities = 31/94 (32%), Positives = 47/94 (50%)
Query: 9 QTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQ 68
E +EK LV KL+ K G RG PDR+II P G +++E+K+ G+L Q
Sbjct: 1 MKESTLEKYLVKEISKLNGLCLKWVAPGTRGVPDRIIIMPEGKTYFVEMKQEKGKLHPLQ 60
Query: 69 MSEIEELRRRGQRVKVLVSMEEVDNFLEELACTL 102
+ R +V VL + E+V+ F+ + T
Sbjct: 61 KYVHRQFENRDHKVYVLWNKEQVNTFIRMVGGTF 94
>gi|156603989|ref|YP_001429935.1| hypothetical protein SPTP3102_gp40 [Staphylococcus phage tp310-2]
gi|154818075|gb|ABS87502.1| hypothetical protein [Staphylococcus phage tp310-2]
Length = 96
Score = 131 bits (330), Expect = 4e-29, Method: Composition-based stats.
Identities = 32/94 (34%), Positives = 47/94 (50%)
Query: 9 QTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQ 68
E +EK LV KL+ K G RG PDR+II P G +++E+K+ G+L Q
Sbjct: 1 MKETTLEKYLVKEITKLNGLCLKWVAPGTRGVPDRIIIMPEGKTYFVEMKQEKGKLHPLQ 60
Query: 69 MSEIEELRRRGQRVKVLVSMEEVDNFLEELACTL 102
+ R RV VL + E+V+ F+ + T
Sbjct: 61 KYVHRQFENRDHRVYVLWNKEQVNTFIRMVGGTF 94
>gi|218133419|ref|ZP_03462223.1| hypothetical protein BACPEC_01284 [Bacteroides pectinophilus ATCC
43243]
gi|217990794|gb|EEC56800.1| hypothetical protein BACPEC_01284 [Bacteroides pectinophilus ATCC
43243]
Length = 93
Score = 130 bits (329), Expect = 4e-29, Method: Composition-based stats.
Identities = 28/93 (30%), Positives = 46/93 (49%)
Query: 9 QTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQ 68
E VE+ L AKK K G G PDR+++ P+G + ++E+K P + Q
Sbjct: 1 MLESTVERHLREEAKKRKGMALKFVSPGMNGVPDRIVLMPDGKMAFVELKAPGKKPRPLQ 60
Query: 69 MSEIEELRRRGQRVKVLVSMEEVDNFLEELACT 101
+ L R G V V+ ++E++ L+E+ T
Sbjct: 61 LKRKRMLERLGFPVYVVDNIEQIGGILDEIQST 93
>gi|42779466|ref|NP_976713.1| phage protein, putative [Bacillus cereus ATCC 10987]
gi|42735382|gb|AAS39321.1| phage protein, putative [Bacillus cereus ATCC 10987]
Length = 93
Score = 130 bits (329), Expect = 5e-29, Method: Composition-based stats.
Identities = 27/93 (29%), Positives = 50/93 (53%)
Query: 9 QTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQ 68
EK +EK+LV KK++ K G G PDR+++ P+G + +IE+K P + Q
Sbjct: 1 MLEKYIEKKLVAEVKKMEGIAAKFVSPGLDGMPDRIVLLPHGKMAFIELKAPGKKPRPLQ 60
Query: 69 MSEIEELRRRGQRVKVLVSMEEVDNFLEELACT 101
+ I +L++ G V+ ++++ L E+ +
Sbjct: 61 IRRIRQLQKLGFTCYVIDDVKQIGGVLGEIQSS 93
>gi|66395557|ref|YP_239929.1| ORF053 [Staphylococcus phage 42E]
gi|215401141|ref|YP_002332396.1| hypothetical protein SauSIPLA35_gp33 [Staphylococcus phage
phiSauS-IPLA35]
gi|62636050|gb|AAX91161.1| ORF053 [Staphylococcus phage 42E]
gi|215260492|gb|ACJ64622.1| gp33 [Staphylococcus phage phiSauS-IPLA35]
Length = 96
Score = 130 bits (328), Expect = 6e-29, Method: Composition-based stats.
Identities = 30/94 (31%), Positives = 46/94 (48%)
Query: 9 QTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQ 68
E +EK LV KL+ K G RG PDR+II P G +++E+K+ G+L Q
Sbjct: 1 MKESTLEKYLVKEITKLNGLCLKWVAPGTRGVPDRIIIMPEGKTYFVEMKQEKGKLHPLQ 60
Query: 69 MSEIEELRRRGQRVKVLVSMEEVDNFLEELACTL 102
+ R V VL + E+V+ F+ + +
Sbjct: 61 KYVHRQFENRDHTVYVLWNKEQVNTFIRMVGGSF 94
>gi|291556510|emb|CBL33627.1| VRR-NUC domain [Eubacterium siraeum V10Sc8a]
Length = 93
Score = 130 bits (328), Expect = 6e-29, Method: Composition-based stats.
Identities = 30/93 (32%), Positives = 45/93 (48%)
Query: 9 QTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQ 68
EK VE+ LV K K G G PDRL++ P G + ++EVK P Q
Sbjct: 1 MREKIVEQHLVKAVKSSGGIAPKLVSPGFDGMPDRLVLLPGGKIGFVEVKAPGKEPRPLQ 60
Query: 69 MSEIEELRRRGQRVKVLVSMEEVDNFLEELACT 101
++ LRR G +V +L +E++ L+E+
Sbjct: 61 VARHGLLRRLGFKVYILDDLEQIGGILDEIRTA 93
>gi|154504836|ref|ZP_02041574.1| hypothetical protein RUMGNA_02346 [Ruminococcus gnavus ATCC 29149]
gi|153794719|gb|EDN77139.1| hypothetical protein RUMGNA_02346 [Ruminococcus gnavus ATCC 29149]
Length = 93
Score = 130 bits (327), Expect = 7e-29, Method: Composition-based stats.
Identities = 27/93 (29%), Positives = 46/93 (49%)
Query: 9 QTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQ 68
E VE+ L A+K K G G PDR+++ P+G + ++E+K P + Q
Sbjct: 1 MLESTVERHLREEARKRKGMALKFVSPGMNGVPDRIVLMPDGKMAFVELKAPGKKPRPLQ 60
Query: 69 MSEIEELRRRGQRVKVLVSMEEVDNFLEELACT 101
+ L R G V V+ ++E++ L+E+ T
Sbjct: 61 LKRKRMLERLGFPVYVVDNIEQIGGILDEIQST 93
>gi|300764699|ref|ZP_07074690.1| conserved hypothetical protein [Listeria monocytogenes FSL N1-017]
gi|300514585|gb|EFK41641.1| conserved hypothetical protein [Listeria monocytogenes FSL N1-017]
Length = 94
Score = 129 bits (324), Expect = 2e-28, Method: Composition-based stats.
Identities = 29/92 (31%), Positives = 48/92 (52%)
Query: 9 QTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQ 68
EK VE+ LV K++ K + G G PDRL++ PNG L ++EVK P + Q
Sbjct: 1 MREKQVEQALVKAVKRVGGICPKFTSPGLAGVPDRLVLMPNGKLGFVEVKAPGKKPRSLQ 60
Query: 69 MSEIEELRRRGQRVKVLVSMEEVDNFLEELAC 100
+ +++L G + VL ++++ LE +
Sbjct: 61 LFRMKQLTDLGFQCFVLDEIDQIPELLERIGG 92
>gi|313618478|gb|EFR90481.1| putative protein p44 [Listeria innocua FSL S4-378]
Length = 93
Score = 129 bits (324), Expect = 2e-28, Method: Composition-based stats.
Identities = 25/93 (26%), Positives = 43/93 (46%)
Query: 9 QTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQ 68
EK +E++LV K + K G G PDR+++ P G + ++E K ++ Q
Sbjct: 1 MQEKYIEQKLVATVKSMGGMAPKFVSPGIDGMPDRIVLLPMGRIAFVECKATGKKMRPLQ 60
Query: 69 MSEIEELRRRGQRVKVLVSMEEVDNFLEELACT 101
++L G V L +E++ L E+ T
Sbjct: 61 NKRKKQLEALGFLVYCLDDIEQIGGILSEIQAT 93
>gi|331648303|ref|ZP_08349392.1| putative protein p44 [Escherichia coli M605]
gi|331042852|gb|EGI14993.1| putative protein p44 [Escherichia coli M605]
Length = 98
Score = 129 bits (324), Expect = 2e-28, Method: Composition-based stats.
Identities = 31/90 (34%), Positives = 40/90 (44%)
Query: 8 YQTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQ 67
Y+ E +EK LV KK K GRR PDR+++ P G + ++E K P
Sbjct: 4 YERESLIEKHLVAEVKKAGGVAFKFVSPGRRSVPDRIVLLPGGRIVFVECKAPGKPPRPD 63
Query: 68 QMSEIEELRRRGQRVKVLVSMEEVDNFLEE 97
Q+ E E LR G V VL S E
Sbjct: 64 QLREHERLRALGFTVVVLDSKNLEGILCGE 93
>gi|325478671|gb|EGC81782.1| VRR-NUC domain protein [Anaerococcus prevotii ACS-065-V-Col13]
Length = 93
Score = 128 bits (323), Expect = 2e-28, Method: Composition-based stats.
Identities = 27/92 (29%), Positives = 42/92 (45%)
Query: 9 QTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQ 68
E ++EK LV K K + G PDR+I+ P G + ++E K+P G Q
Sbjct: 1 MLENEIEKALVDKVKPHGGLCLKFTSPSMTGIPDRIILLPKGKIGFVETKRPGGEPRPIQ 60
Query: 69 MSEIEELRRRGQRVKVLVSMEEVDNFLEELAC 100
I + + G +V VL S E +D + +
Sbjct: 61 KRRIRQFKNLGFKVYVLDSKENIDEIINRIGG 92
>gi|303239098|ref|ZP_07325628.1| VRR-NUC domain protein [Acetivibrio cellulolyticus CD2]
gi|302593436|gb|EFL63154.1| VRR-NUC domain protein [Acetivibrio cellulolyticus CD2]
Length = 138
Score = 128 bits (323), Expect = 2e-28, Method: Composition-based stats.
Identities = 27/91 (29%), Positives = 47/91 (51%)
Query: 9 QTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQ 68
EK++EK+L T K + K G G PDR+++ PNG +++ E+K+ +L Q
Sbjct: 47 MLEKELEKKLRTAVKAIGGLALKFVSPGMAGVPDRMVLLPNGRIYFSELKRHGEKLRPLQ 106
Query: 69 MSEIEELRRRGQRVKVLVSMEEVDNFLEELA 99
++L G +V + S ++ FL E+
Sbjct: 107 QKRKQQLEMLGFKVYCIDSASSLEGFLREVG 137
>gi|253581728|ref|ZP_04858952.1| conserved hypothetical protein [Fusobacterium varium ATCC 27725]
gi|251836077|gb|EES64614.1| conserved hypothetical protein [Fusobacterium varium ATCC 27725]
Length = 97
Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats.
Identities = 28/91 (30%), Positives = 50/91 (54%)
Query: 9 QTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQ 68
EK++EK L KKL K + G G PDRL++ P G + ++E+K P G+ + Q
Sbjct: 1 MREKEIEKYLREEIKKLGGIAYKFTSPGNSGVPDRLVLLPCGVVAFVELKAPGGKTTAIQ 60
Query: 69 MSEIEELRRRGQRVKVLVSMEEVDNFLEELA 99
+I +++ V ++ S +VD F++++
Sbjct: 61 DRQIARIQKLDFDVYIVDSKFKVDCFIQDMQ 91
>gi|225573261|ref|ZP_03782016.1| hypothetical protein RUMHYD_01452 [Blautia hydrogenotrophica DSM
10507]
gi|225039393|gb|EEG49639.1| hypothetical protein RUMHYD_01452 [Blautia hydrogenotrophica DSM
10507]
Length = 104
Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats.
Identities = 26/94 (27%), Positives = 44/94 (46%)
Query: 8 YQTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQ 67
+ EK +E++ + K G G PDRL + P G + ++EVK P +
Sbjct: 11 FVKEKIIEQKFRAAVRTAGGVAVKFVSPGLDGMPDRLALLPGGRMAFVEVKAPGKKPRPL 70
Query: 68 QMSEIEELRRRGQRVKVLVSMEEVDNFLEELACT 101
Q + LRR G +V VL +++ ++E+ T
Sbjct: 71 QEARHRMLRRLGFQVYVLDDEKQIGGIIDEIQST 104
>gi|227498326|ref|ZP_03928476.1| diacylglycerol kinase [Acidaminococcus sp. D21]
gi|226903788|gb|EEH89706.1| diacylglycerol kinase [Acidaminococcus sp. D21]
Length = 102
Score = 127 bits (321), Expect = 4e-28, Method: Composition-based stats.
Identities = 30/93 (32%), Positives = 47/93 (50%)
Query: 9 QTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQ 68
EK++E LV +K K G PDRL++ +G + ++EVK P + Q
Sbjct: 1 MREKEIEHNLVMETRKAGGMAVKFVSPSFSGMPDRLVLLGDGKIGFVEVKAPGQKPRPLQ 60
Query: 69 MSEIEELRRRGQRVKVLVSMEEVDNFLEELACT 101
+ LRR G +V VL +ME++ L+ +A T
Sbjct: 61 LKRHAMLRRLGYQVFVLDAMEDIPAVLKAIAHT 93
>gi|191174025|ref|ZP_03035542.1| VRR_NUC domain protein [Escherichia coli F11]
gi|190905716|gb|EDV65338.1| VRR_NUC domain protein [Escherichia coli F11]
gi|324014346|gb|EGB83565.1| VRR-NUC domain protein [Escherichia coli MS 60-1]
Length = 98
Score = 127 bits (320), Expect = 5e-28, Method: Composition-based stats.
Identities = 31/90 (34%), Positives = 41/90 (45%)
Query: 8 YQTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQ 67
Y+ E +EK LV KK K GRR PDR+++ P G + ++E K P+
Sbjct: 4 YERESLIEKHLVAEVKKAGGVAFKFVSPGRRSVPDRIVLLPGGRIVFVECKAPSKPPRPD 63
Query: 68 QMSEIEELRRRGQRVKVLVSMEEVDNFLEE 97
Q+ E E LR G V VL S E
Sbjct: 64 QLREHERLRALGFTVVVLDSKNLEGILCGE 93
>gi|150391740|ref|YP_001321789.1| VRR_NUC domain-containing protein [Alkaliphilus metalliredigens
QYMF]
gi|149951602|gb|ABR50130.1| VRR_NUC domain protein [Alkaliphilus metalliredigens QYMF]
Length = 94
Score = 127 bits (319), Expect = 6e-28, Method: Composition-based stats.
Identities = 25/90 (27%), Positives = 46/90 (51%)
Query: 9 QTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQ 68
TEK +E++LV K+ K G G PDR+++ P G + ++E+K P ++ Q
Sbjct: 1 MTEKYIEQKLVKAVKERGGIAPKFVSPGLDGVPDRIVLLPMGRMAFVELKAPGNKMRPLQ 60
Query: 69 MSEIEELRRRGQRVKVLVSMEEVDNFLEEL 98
+ +L G V + +E++ L+E+
Sbjct: 61 VKRKTQLEALGFLVYCIDGVEQIGGVLDEI 90
>gi|70726781|ref|YP_253695.1| hypothetical protein SH1780 [Staphylococcus haemolyticus JCSC1435]
gi|68447505|dbj|BAE05089.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435]
Length = 92
Score = 127 bits (319), Expect = 7e-28, Method: Composition-based stats.
Identities = 30/92 (32%), Positives = 49/92 (53%)
Query: 9 QTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQ 68
E +E LV KKL K G RG PDR++I P G +++E+K+P GR+ Q
Sbjct: 1 MRESKIESYLVREVKKLKGLCLKWVSPGTRGVPDRIVIMPKGKTYYVEMKQPNGRVDPLQ 60
Query: 69 MSEIEELRRRGQRVKVLVSMEEVDNFLEELAC 100
++L R +V L + E+V+ F++++
Sbjct: 61 QYMHKQLTNRDHQVFTLWTKEQVNEFIKKVGD 92
>gi|323484111|ref|ZP_08089481.1| hypothetical protein HMPREF9474_01232 [Clostridium symbiosum
WAL-14163]
gi|323402553|gb|EGA94881.1| hypothetical protein HMPREF9474_01232 [Clostridium symbiosum
WAL-14163]
Length = 93
Score = 126 bits (318), Expect = 7e-28, Method: Composition-based stats.
Identities = 25/93 (26%), Positives = 44/93 (47%)
Query: 9 QTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQ 68
E +E++L KK+ K G G PDR+++ P+ + ++E+K P +L Q
Sbjct: 1 MRENAIERQLAMAVKKMGGMAVKFVSPGLDGVPDRIVLLPDKKMAFVELKAPGKKLRPLQ 60
Query: 69 MSEIEELRRRGQRVKVLVSMEEVDNFLEELACT 101
+L G V V+ E++ L+E+ T
Sbjct: 61 EKRRWQLEALGFPVYVIDGAEQIGGVLDEICST 93
>gi|304406780|ref|ZP_07388435.1| VRR-NUC domain protein [Paenibacillus curdlanolyticus YK9]
gi|304344313|gb|EFM10152.1| VRR-NUC domain protein [Paenibacillus curdlanolyticus YK9]
Length = 102
Score = 126 bits (318), Expect = 8e-28, Method: Composition-based stats.
Identities = 22/93 (23%), Positives = 42/93 (45%)
Query: 9 QTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQ 68
E+D+E L + K + G G PDR+++ P G + ++E+K P + + Q
Sbjct: 1 MRERDIETYLREKVRAAGGKAYKWTSPGNAGVPDRIVMLPGGRVAFVELKAPGKKATPLQ 60
Query: 69 MSEIEELRRRGQRVKVLVSMEEVDNFLEELACT 101
+++ + G V V+ S D F+ +
Sbjct: 61 VNQQRTISNLGLPVTVIDSKAGADAFISRMQAA 93
>gi|170023448|ref|YP_001719953.1| VRR-NUC domain-containing protein [Yersinia pseudotuberculosis
YPIII]
gi|169749982|gb|ACA67500.1| VRR-NUC domain protein [Yersinia pseudotuberculosis YPIII]
Length = 89
Score = 126 bits (318), Expect = 8e-28, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 41/84 (48%)
Query: 6 FHYQTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLS 65
Y E +E LV KK K GRR PDRL++ P G + ++E K P + +
Sbjct: 1 MSYIREDSIEAHLVKEVKKAGGIAYKFISPGRRSVPDRLVLLPGGNVIFVECKAPGEKPT 60
Query: 66 HQQMSEIEELRRRGQRVKVLVSME 89
Q+ E E++R G V VL S +
Sbjct: 61 AAQLREHEKIRALGFAVWVLDSKD 84
>gi|262043425|ref|ZP_06016550.1| hypothetical protein HMPREF0484_3568 [Klebsiella pneumoniae
subsp. rhinoscleromatis ATCC 13884]
gi|259039251|gb|EEW40397.1| hypothetical protein HMPREF0484_3568 [Klebsiella pneumoniae
subsp. rhinoscleromatis ATCC 13884]
Length = 89
Score = 126 bits (318), Expect = 8e-28, Method: Composition-based stats.
Identities = 28/81 (34%), Positives = 38/81 (46%)
Query: 8 YQTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQ 67
Y+ E +EK L K + K GRR PDR+++ P G + ++E K P
Sbjct: 3 YERESIIEKHLTATVKAVGGIAYKFVSPGRRSVPDRIVLLPGGRIVFVECKTPGKAPRAD 62
Query: 68 QMSEIEELRRRGQRVKVLVSM 88
Q+ E E LR G V VL S
Sbjct: 63 QLREHERLRALGFNVVVLDSK 83
>gi|295096882|emb|CBK85972.1| VRR-NUC domain [Enterobacter cloacae subsp. cloacae NCTC 9394]
Length = 91
Score = 126 bits (317), Expect = 9e-28, Method: Composition-based stats.
Identities = 31/81 (38%), Positives = 39/81 (48%)
Query: 8 YQTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQ 67
Y+ E +EK LV KK K GRR PDR+++ P G L ++E K P
Sbjct: 3 YERESLIEKHLVAEVKKAGGVAYKFVSPGRRSVPDRIVLLPGGRLVFVECKAPGKPPRAD 62
Query: 68 QMSEIEELRRRGQRVKVLVSM 88
Q+ E E LR G V VL S
Sbjct: 63 QLREHERLRALGFTVVVLDSK 83
>gi|9633591|ref|NP_051005.1| hypothetical protein APSE-1_44 [Acyrthosiphon pisum bacteriophage
APSE-1]
gi|9910954|sp|Q9T1Q4|VP44_BPAPS RecName: Full=Putative nuclease p44
gi|6118039|gb|AAF03987.1|AF157835_44 P44 [Endosymbiont phage APSE-1]
Length = 93
Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats.
Identities = 29/80 (36%), Positives = 42/80 (52%)
Query: 10 TEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQM 69
E +EK LV+ +K+ K GRRG PDRL+ PNG + ++E K P + + Q+
Sbjct: 5 REDSIEKHLVSEVRKIGGIAYKFVSPGRRGVPDRLVALPNGKIIFVECKAPGEKPTPYQL 64
Query: 70 SEIEELRRRGQRVKVLVSME 89
E L G +V VL S +
Sbjct: 65 REHARLFALGHQVIVLDSQD 84
>gi|302873664|ref|YP_003842297.1| VRR-NUC domain-containing protein [Clostridium cellulovorans
743B]
gi|307686612|ref|ZP_07629058.1| VRR-NUC domain-containing protein [Clostridium cellulovorans
743B]
gi|302576521|gb|ADL50533.1| VRR-NUC domain-containing protein [Clostridium cellulovorans
743B]
Length = 92
Score = 125 bits (316), Expect = 1e-27, Method: Composition-based stats.
Identities = 31/90 (34%), Positives = 46/90 (51%)
Query: 9 QTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQ 68
E +EK L KK K G G PDRL++ PNG + ++E+K P + H Q
Sbjct: 1 MRESKIEKALTIELKKRGGMALKFVSPGMAGVPDRLVLIPNGEVIFVELKAPGKTMRHLQ 60
Query: 69 MSEIEELRRRGQRVKVLVSMEEVDNFLEEL 98
+ +L G RV V+ S+ VD+F+ E+
Sbjct: 61 LKRKSQLENLGFRVYVIDSLGGVDSFVREV 90
>gi|211731860|gb|ACJ10158.1| conserved hypothetical protein [Bacteriophage APSE-3]
Length = 93
Score = 125 bits (316), Expect = 1e-27, Method: Composition-based stats.
Identities = 29/80 (36%), Positives = 42/80 (52%)
Query: 10 TEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQM 69
E +EK LV+ +K+ K GRRG PDRL+ PNG + ++E K P + + Q+
Sbjct: 5 REDSIEKHLVSEVQKIGGIAYKFVSPGRRGVPDRLVALPNGKIIFVECKAPGEKPTPYQL 64
Query: 70 SEIEELRRRGQRVKVLVSME 89
E L G +V VL S +
Sbjct: 65 REHARLFALGHQVIVLDSQD 84
>gi|332160955|ref|YP_004297532.1| VRR-NUC domain protein [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|325665185|gb|ADZ41829.1| VRR-NUC domain protein [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|330862110|emb|CBX72274.1| putative protein p44 [Yersinia enterocolitica W22703]
Length = 90
Score = 125 bits (316), Expect = 1e-27, Method: Composition-based stats.
Identities = 30/81 (37%), Positives = 42/81 (51%)
Query: 8 YQTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQ 67
Y E +E LV KK+ K GRR PDRL++ P G + ++E K P + +
Sbjct: 3 YNREDSIEDHLVKEVKKVGGIAYKFISPGRRSVPDRLVLLPGGKVIFVECKAPGEKPTAA 62
Query: 68 QMSEIEELRRRGQRVKVLVSM 88
Q+ E E+LR G V+VL S
Sbjct: 63 QLREHEKLRALGFTVRVLDSK 83
>gi|325690427|gb|EGD32430.1| VRR-NUC domain protein [Streptococcus sanguinis SK115]
Length = 103
Score = 125 bits (316), Expect = 1e-27, Method: Composition-based stats.
Identities = 29/93 (31%), Positives = 50/93 (53%)
Query: 9 QTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQ 68
E+++E++L +KK K G G PDR+++ P G L ++E+K P R Q
Sbjct: 1 MREREIEEKLRVESKKRGGLAMKFVSPGLVGVPDRIVVLPQGRLGFVELKAPGERPRRIQ 60
Query: 69 MSEIEELRRRGQRVKVLVSMEEVDNFLEELACT 101
+ +E+LR+ G V VL E++ L+++ T
Sbjct: 61 VRRMEQLRKLGFLVYVLDDKEKIGEILDDIQGT 93
>gi|300853543|ref|YP_003778527.1| phage-like protein [Clostridium ljungdahlii DSM 13528]
gi|300433658|gb|ADK13425.1| phage-related protein [Clostridium ljungdahlii DSM 13528]
Length = 93
Score = 125 bits (316), Expect = 1e-27, Method: Composition-based stats.
Identities = 25/93 (26%), Positives = 44/93 (47%)
Query: 9 QTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQ 68
EK +E +LVT KK+ K G G PDRL+ P+G ++E+K ++ Q
Sbjct: 1 MLEKYIENKLVTAVKKMGGICPKFVSPGFDGVPDRLVFLPHGKFAFVELKAKGKKMRPLQ 60
Query: 69 MSEIEELRRRGQRVKVLVSMEEVDNFLEELACT 101
++ +L + G V + ++ L E+ +
Sbjct: 61 VNRKMQLEQLGFLVYCIDDASKIGGILNEIQSS 93
>gi|77412070|ref|ZP_00788396.1| P44 [Streptococcus agalactiae CJB111]
gi|77161875|gb|EAO72860.1| P44 [Streptococcus agalactiae CJB111]
Length = 109
Score = 125 bits (316), Expect = 2e-27, Method: Composition-based stats.
Identities = 31/93 (33%), Positives = 46/93 (49%)
Query: 9 QTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQ 68
EK VE++LV+ KK K G PDRL+ P G +EVK P G+ Q
Sbjct: 17 MREKIVEQKLVSEVKKRGGVCPKWVSPSFGGVPDRLVFLPKGKFGMVEVKAPGGKPRLLQ 76
Query: 69 MSEIEELRRRGQRVKVLVSMEEVDNFLEELACT 101
++ + G +V VL S+E++ L+E+ T
Sbjct: 77 VTRHKMFDGLGFKVHVLDSVEKIGEVLDEIEFT 109
>gi|168179445|ref|ZP_02614109.1| phage associated protein [Clostridium botulinum NCTC 2916]
gi|182669696|gb|EDT81672.1| phage associated protein [Clostridium botulinum NCTC 2916]
Length = 91
Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats.
Identities = 30/90 (33%), Positives = 49/90 (54%)
Query: 9 QTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQ 68
E +EKRL +KL K G G PDR+++ P G + ++E+K P + Q
Sbjct: 1 MLESSIEKRLKKEIEKLSGKALKFVSPGVSGVPDRIVLLPQGRIIFVELKAPGKKPRPIQ 60
Query: 69 MSEIEELRRRGQRVKVLVSMEEVDNFLEEL 98
I+EL G RV+++ S+E ++NF+ E+
Sbjct: 61 KYRIKELTALGFRVEIIDSIEGINNFIREI 90
>gi|188494825|ref|ZP_03002095.1| phage associated protein [Escherichia coli 53638]
gi|188490024|gb|EDU65127.1| phage associated protein [Escherichia coli 53638]
gi|323173127|gb|EFZ58758.1| VRR-NUC domain protein [Escherichia coli LT-68]
gi|332088067|gb|EGI93192.1| VRR-NUC domain protein [Shigella boydii 5216-82]
Length = 98
Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 39/81 (48%)
Query: 8 YQTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQ 67
Y+ E +EK LV KK K G R PDR+++ P G + ++E K P
Sbjct: 12 YERESLIEKHLVAEVKKAGGVAFKFVSPGHRSVPDRIVLLPGGRIVFVECKSPGKPPRPD 71
Query: 68 QMSEIEELRRRGQRVKVLVSM 88
Q+ E E LR+ G V VL S
Sbjct: 72 QLREHERLRKLGFTVVVLDSK 92
>gi|284048431|ref|YP_003398770.1| VRR-NUC domain protein [Acidaminococcus fermentans DSM 20731]
gi|283952652|gb|ADB47455.1| VRR-NUC domain protein [Acidaminococcus fermentans DSM 20731]
Length = 100
Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats.
Identities = 28/94 (29%), Positives = 45/94 (47%)
Query: 6 FHYQTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLS 65
++ EK +E LVT +K K G PDRL++ P+G + ++EVK P +
Sbjct: 1 MNFLREKQIEHSLVTAVRKQGGLALKFVSPSYAGMPDRLVLLPDGKMAFVEVKAPGKKPR 60
Query: 66 HQQMSEIEELRRRGQRVKVLVSMEEVDNFLEELA 99
Q + LR G +V VL + L+++A
Sbjct: 61 VLQEKQHRMLRALGFQVFVLDDASAIPGLLKKIA 94
>gi|194429282|ref|ZP_03061809.1| VRR-NUC domain protein [Escherichia coli B171]
gi|218555137|ref|YP_002388050.1| hypothetical protein ECIAI1_2667 [Escherichia coli IAI1]
gi|194412690|gb|EDX28985.1| VRR-NUC domain protein [Escherichia coli B171]
gi|218361905|emb|CAQ99505.1| conserved hypothetical protein from bacteriophage origin
[Escherichia coli IAI1]
gi|323159214|gb|EFZ45204.1| VRR-NUC domain protein [Escherichia coli E128010]
Length = 95
Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 38/81 (46%)
Query: 8 YQTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQ 67
Y+ E +EK LV KK K GRR PDR+++ P G + ++E K P
Sbjct: 3 YERENLIEKHLVAEVKKAGGVAFKFVSPGRRSVPDRIVLLPGGRIIFVECKSPGKPPRPD 62
Query: 68 QMSEIEELRRRGQRVKVLVSM 88
Q+ E LR G V VL S
Sbjct: 63 QLREHGRLRALGFTVVVLDSK 83
>gi|66395482|ref|YP_239851.1| ORF037 [Staphylococcus phage 2638A]
gi|62635909|gb|AAX91020.1| ORF037 [Staphylococcus phage 2638A]
Length = 98
Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats.
Identities = 31/92 (33%), Positives = 49/92 (53%)
Query: 9 QTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQ 68
E ++EK LV KK K G RG PDR++I P G +++E+K+P GR Q
Sbjct: 1 MRESNIEKYLVKEVKKKKGLCLKWVAPGTRGVPDRIVIMPKGKTYYVEMKQPKGRTDPLQ 60
Query: 69 MSEIEELRRRGQRVKVLVSMEEVDNFLEELAC 100
++L RG +V L ++VD F++++
Sbjct: 61 KYMHKQLEDRGHQVFTLWDKKQVDEFIKKVGA 92
>gi|331654017|ref|ZP_08355018.1| putative protein p44 [Escherichia coli M718]
gi|331048866|gb|EGI20942.1| putative protein p44 [Escherichia coli M718]
Length = 98
Score = 125 bits (314), Expect = 2e-27, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 39/81 (48%)
Query: 8 YQTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQ 67
Y+ E +EK LV KK K G R PDR+++ P G + ++E K P
Sbjct: 12 YERESLIEKHLVAEVKKAGGVAFKFVSPGHRSVPDRIVLLPGGRIVFVECKSPGKPPRPD 71
Query: 68 QMSEIEELRRRGQRVKVLVSM 88
Q+ E E LR+ G V VL S
Sbjct: 72 QLREHERLRKLGFTVVVLDSK 92
>gi|212499740|ref|YP_002308548.1| hypothetical protein APSE235 [Bacteriophage APSE-2]
gi|238898731|ref|YP_002924412.1| APSE-2 prophage; hypothetical protein [Candidatus Hamiltonella
defensa 5AT (Acyrthosiphon pisum)]
gi|75906054|gb|ABA29400.1| conserved hypothetical protein [Bacteriophage APSE-2]
gi|211731709|gb|ACJ10197.1| conserved hypothetical protein [Bacteriophage APSE-2]
gi|211731854|gb|ACJ10153.1| conserved hypothetical protein [Bacteriophage APSE-4]
gi|229466490|gb|ACQ68264.1| APSE-2 prophage; conserved hypothetical protein [Candidatus
Hamiltonella defensa 5AT (Acyrthosiphon pisum)]
Length = 94
Score = 124 bits (313), Expect = 3e-27, Method: Composition-based stats.
Identities = 29/80 (36%), Positives = 41/80 (51%)
Query: 10 TEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQM 69
E +EK LV +K+ K GRRG PDRL+ PNG + ++E K P + + Q+
Sbjct: 5 REDSIEKHLVREVQKIGGIAYKFVSPGRRGVPDRLVALPNGKIIFVECKAPGEKPTPYQL 64
Query: 70 SEIEELRRRGQRVKVLVSME 89
E L G +V VL S +
Sbjct: 65 REHARLFALGHQVIVLDSQD 84
>gi|211731845|gb|ACJ10148.1| conserved hypothetical protein [Bacteriophage APSE-5]
Length = 93
Score = 124 bits (313), Expect = 3e-27, Method: Composition-based stats.
Identities = 29/80 (36%), Positives = 41/80 (51%)
Query: 10 TEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQM 69
E +EK LV +K+ K GRRG PDRL+ PNG + ++E K P + + Q+
Sbjct: 5 REDSIEKHLVREVQKIGGIAYKFVSPGRRGVPDRLVALPNGKIIFVECKAPGEKPTPYQL 64
Query: 70 SEIEELRRRGQRVKVLVSME 89
E L G +V VL S +
Sbjct: 65 REHARLFALGHQVIVLDSQD 84
>gi|327461126|gb|EGF07459.1| VRR-NUC domain protein [Streptococcus sanguinis SK1057]
Length = 106
Score = 124 bits (313), Expect = 3e-27, Method: Composition-based stats.
Identities = 26/93 (27%), Positives = 48/93 (51%)
Query: 9 QTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQ 68
E+ +E++L ++K K G G PDR++ P G + ++E+K P + Q
Sbjct: 1 MQERAIEEKLRVESQKRGGLAMKFISPGLVGVPDRIVALPQGKIGFVELKAPGEKPRKIQ 60
Query: 69 MSEIEELRRRGQRVKVLVSMEEVDNFLEELACT 101
+ +E+LR+ G V VL E++ L+++ T
Sbjct: 61 VRRMEQLRKLGFLVYVLDDKEKIGEILDDIQGT 93
>gi|153940485|ref|YP_001391669.1| VRR-NUC domain-containing protein [Clostridium botulinum F str.
Langeland]
gi|152936381|gb|ABS41879.1| VRR-NUC domain protein [Clostridium botulinum F str. Langeland]
Length = 93
Score = 124 bits (312), Expect = 4e-27, Method: Composition-based stats.
Identities = 31/90 (34%), Positives = 50/90 (55%)
Query: 9 QTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQ 68
E +EKRL +KL K G G PDR+++ P G + ++E+K P + Q
Sbjct: 1 MEESRIEKRLKKEIEKLGGKALKFVSPGVSGVPDRIVLLPEGRIIFVELKAPGKKPRPIQ 60
Query: 69 MSEIEELRRRGQRVKVLVSMEEVDNFLEEL 98
I+ELR G RV+++ S+E ++NF+E +
Sbjct: 61 KYRIKELRSLGFRVEIIDSIERINNFVEGI 90
>gi|284007834|emb|CBA73722.1| conserved hypothetical phage protein [Arsenophonus nasoniae]
Length = 93
Score = 124 bits (312), Expect = 5e-27, Method: Composition-based stats.
Identities = 29/80 (36%), Positives = 42/80 (52%)
Query: 10 TEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQM 69
E+ +EK LV +K+ K GRRG PDRL+ PNG + ++E K P + + Q+
Sbjct: 5 REESIEKHLVREVQKIGGIAYKFVSPGRRGVPDRLVALPNGNIIFVECKAPGEKPTPYQL 64
Query: 70 SEIEELRRRGQRVKVLVSME 89
E L G +V VL S +
Sbjct: 65 REHARLFALGHQVIVLDSQD 84
>gi|331090253|ref|ZP_08339140.1| hypothetical protein HMPREF1025_02723 [Lachnospiraceae bacterium
3_1_46FAA]
gi|330401872|gb|EGG81447.1| hypothetical protein HMPREF1025_02723 [Lachnospiraceae bacterium
3_1_46FAA]
Length = 108
Score = 124 bits (311), Expect = 5e-27, Method: Composition-based stats.
Identities = 27/92 (29%), Positives = 41/92 (44%)
Query: 10 TEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQM 69
E +EK LV AK K G G PDRL++ P G ++E+K P +L +
Sbjct: 17 RESVIEKALVKEAKSRGGMAVKFVSPGFDGVPDRLVLLPGGKCAFVELKAPGKKLRPLKE 76
Query: 70 SEIEELRRRGQRVKVLVSMEEVDNFLEELACT 101
+L G V V+ +E++ L + T
Sbjct: 77 KRKHQLEALGFSVYVIDGLEQIGGVLHGIQTT 108
>gi|260845242|ref|YP_003223020.1| hypothetical protein ECO103_3135 [Escherichia coli O103:H2 str.
12009]
gi|257760389|dbj|BAI31886.1| hypothetical protein ECO103_3135 [Escherichia coli O103:H2 str.
12009]
gi|309702942|emb|CBJ02273.1| putative phage related protein [Escherichia coli ETEC H10407]
Length = 97
Score = 124 bits (311), Expect = 5e-27, Method: Composition-based stats.
Identities = 30/90 (33%), Positives = 39/90 (43%)
Query: 8 YQTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQ 67
Y+ E +EK LV KK K GRR PDR+++ P G + ++E K P
Sbjct: 3 YERESLIEKHLVAEVKKAGGVAFKFISPGRRSVPDRIVLLPGGRIVFVECKAPGKPPRAG 62
Query: 68 QMSEIEELRRRGQRVKVLVSMEEVDNFLEE 97
Q+ E LR G V VL S E
Sbjct: 63 QLREHGRLRALGFTVVVLDSKNLEGILCGE 92
>gi|204927408|ref|ZP_03218610.1| VRR-NUC domain protein [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
gi|204324073|gb|EDZ09268.1| VRR-NUC domain protein [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
Length = 89
Score = 123 bits (310), Expect = 6e-27, Method: Composition-based stats.
Identities = 31/81 (38%), Positives = 38/81 (46%)
Query: 8 YQTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQ 67
Y+ E +EK LV KK K GRR PDR+++ P G L ++E K P
Sbjct: 3 YERESIIEKHLVAEVKKAGGVAFKFVSPGRRSVPDRIVLLPGGRLVFVECKAPGKAPRAD 62
Query: 68 QMSEIEELRRRGQRVKVLVSM 88
Q E E LR G V VL S
Sbjct: 63 QGREHERLRALGFTVVVLDSK 83
>gi|212712314|ref|ZP_03320442.1| hypothetical protein PROVALCAL_03402 [Providencia alcalifaciens
DSM 30120]
gi|212685060|gb|EEB44588.1| hypothetical protein PROVALCAL_03402 [Providencia alcalifaciens
DSM 30120]
Length = 89
Score = 123 bits (310), Expect = 7e-27, Method: Composition-based stats.
Identities = 27/80 (33%), Positives = 41/80 (51%)
Query: 10 TEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQM 69
E +E+ LV KK+ K + GRRG PDR+++ P+G + ++E K P + Q+
Sbjct: 5 REDVIERHLVYKVKKVGGIAYKFTSPGRRGVPDRIVLLPHGKIIFVECKAPGEKPRPDQL 64
Query: 70 SEIEELRRRGQRVKVLVSME 89
E L G V VL S +
Sbjct: 65 REHARLFALGFHVVVLDSKD 84
>gi|325662085|ref|ZP_08150704.1| hypothetical protein HMPREF0490_01442 [Lachnospiraceae bacterium
4_1_37FAA]
gi|325471748|gb|EGC74967.1| hypothetical protein HMPREF0490_01442 [Lachnospiraceae bacterium
4_1_37FAA]
Length = 96
Score = 123 bits (310), Expect = 7e-27, Method: Composition-based stats.
Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Query: 9 QTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQ 68
E++VEK+L+ KK K G G PDR++I P+G + ++EVK+P + Q
Sbjct: 5 MREREVEKQLIDEVKKRGGLCEKWIS-GTVGWPDRIVIIPDGKIGFVEVKRPGEKPRPIQ 63
Query: 69 MSEIEELRRRGQRVKVLVSMEEVDNFLEELACT 101
+ +LR+ G +V VL +++ L +L T
Sbjct: 64 VHRHNQLRQIGVKVYVLDHQDKIGGILNDLQST 96
>gi|167039883|ref|YP_001662868.1| hypothetical protein Teth514_1238 [Thermoanaerobacter sp. X514]
gi|300915370|ref|ZP_07132684.1| VRR-NUC domain protein [Thermoanaerobacter sp. X561]
gi|307724793|ref|YP_003904544.1| VRR-NUC domain-containing protein [Thermoanaerobacter sp. X513]
gi|166854123|gb|ABY92532.1| hypothetical protein Teth514_1238 [Thermoanaerobacter sp. X514]
gi|300888646|gb|EFK83794.1| VRR-NUC domain protein [Thermoanaerobacter sp. X561]
gi|307581854|gb|ADN55253.1| VRR-NUC domain-containing protein [Thermoanaerobacter sp. X513]
Length = 93
Score = 123 bits (310), Expect = 8e-27, Method: Composition-based stats.
Identities = 29/93 (31%), Positives = 44/93 (47%)
Query: 9 QTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQ 68
EK +E++LV K + K + G G PDRLI+ PN L ++EVK P L Q
Sbjct: 1 MREKKIEQQLVKEVKDIGGIALKIASPGFDGMPDRLILLPNRKLAFVEVKAPGKTLRPLQ 60
Query: 69 MSEIEELRRRGQRVKVLVSMEEVDNFLEELACT 101
+L G V L ++++ L E+ +
Sbjct: 61 EKRKRQLEALGFLVFCLDHIDQIGGILHEIQAS 93
>gi|256847829|ref|ZP_05553274.1| phage associated protein [Lactobacillus coleohominis 101-4-CHN]
gi|256715518|gb|EEU30494.1| phage associated protein [Lactobacillus coleohominis 101-4-CHN]
Length = 93
Score = 123 bits (310), Expect = 8e-27, Method: Composition-based stats.
Identities = 23/93 (24%), Positives = 42/93 (45%)
Query: 9 QTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQ 68
EK +E V + K + G PDRL++ P+G + ++E+K P Q
Sbjct: 1 MLEKRIETAFVKATHQRGGLCLKFTSPSMAGVPDRLVLLPDGHMGFVEMKAPGKHPRPLQ 60
Query: 69 MSEIEELRRRGQRVKVLVSMEEVDNFLEELACT 101
+ I +L+R G +V V +++ L+ +
Sbjct: 61 VQRINQLKRLGYQVFVCDQFDQIGGMLDAIQAA 93
>gi|315121968|ref|YP_004062457.1| VRR-NUC domain-containing protein [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|315122936|ref|YP_004063425.1| VRR-NUC domain-containing protein [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495370|gb|ADR51969.1| VRR-NUC domain-containing protein [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313496338|gb|ADR52937.1| VRR-NUC domain-containing protein [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 101
Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats.
Identities = 72/95 (75%), Positives = 81/95 (85%)
Query: 7 HYQTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSH 66
H Q+E ++EKRLV G ++LDCWVRKASFV RGCPDRLIITP G LWWIEVK+P+GRLS
Sbjct: 6 HQQSEHEIEKRLVKGVQQLDCWVRKASFVSHRGCPDRLIITPQGRLWWIEVKQPSGRLSP 65
Query: 67 QQMSEIEELRRRGQRVKVLVSMEEVDNFLEELACT 101
QQ EIEEL RRGQRVKVL S EEVDNFL+ELAC+
Sbjct: 66 QQKIEIEELLRRGQRVKVLFSAEEVDNFLKELACS 100
>gi|269120030|ref|YP_003308207.1| VRR-NUC domain protein [Sebaldella termitidis ATCC 33386]
gi|268613908|gb|ACZ08276.1| VRR-NUC domain protein [Sebaldella termitidis ATCC 33386]
Length = 110
Score = 122 bits (308), Expect = 1e-26, Method: Composition-based stats.
Identities = 27/93 (29%), Positives = 47/93 (50%)
Query: 10 TEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQM 69
EKD+EK L KK+ K G G PDRL++ P +++E+K P + Q
Sbjct: 7 KEKDIEKYLRDEIKKVGGIAYKFVSPGNAGVPDRLVLLPGRWSFFVELKAPGKKTRAVQD 66
Query: 70 SEIEELRRRGQRVKVLVSMEEVDNFLEELACTL 102
+I ++R V ++ S ++VD+ ++ + L
Sbjct: 67 RQIRKIRNLDFSVLIIDSKKQVDDLVKMIKHHL 99
>gi|167630963|ref|YP_001681462.1| hypothetical protein HM1_2942 [Heliobacterium modesticaldum Ice1]
gi|167593703|gb|ABZ85451.1| conserved hypothetical protein [Heliobacterium modesticaldum Ice1]
Length = 93
Score = 122 bits (308), Expect = 1e-26, Method: Composition-based stats.
Identities = 25/93 (26%), Positives = 40/93 (43%)
Query: 9 QTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQ 68
EK +E +L K + K G G PDRL++ P+G L +IE+K R Q
Sbjct: 1 MREKTIEIKLKNTVKSMGGIALKLISPGFDGVPDRLVLLPHGKLAFIELKASGKRPRPLQ 60
Query: 69 MSEIEELRRRGQRVKVLVSMEEVDNFLEELACT 101
+L G V + ++ L+E+ +
Sbjct: 61 EKRKRQLEALGFLVFCIDGAGQIGGILDEIQSS 93
>gi|304439203|ref|ZP_07399121.1| VRR-NUC domain protein [Peptoniphilus duerdenii ATCC BAA-1640]
gi|304372335|gb|EFM25923.1| VRR-NUC domain protein [Peptoniphilus duerdenii ATCC BAA-1640]
Length = 93
Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats.
Identities = 27/92 (29%), Positives = 44/92 (47%)
Query: 9 QTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQ 68
E ++EK LV K K + + G PDR+I+ P G + ++E K+P G Q
Sbjct: 1 MLENEIEKALVDKVKLHGGLCLKFTSLSMTGIPDRIILLPKGKVGFVETKRPGGEPRPIQ 60
Query: 69 MSEIEELRRRGQRVKVLVSMEEVDNFLEELAC 100
I + + G +V VL S E +D ++ +
Sbjct: 61 KKRIRQFKNLGFKVYVLDSKENIDEIIKRIGG 92
>gi|297583089|ref|YP_003698869.1| VRR-NUC domain-containing protein [Bacillus selenitireducens MLS10]
gi|297141546|gb|ADH98303.1| VRR-NUC domain protein [Bacillus selenitireducens MLS10]
Length = 96
Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats.
Identities = 31/92 (33%), Positives = 43/92 (46%)
Query: 9 QTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQ 68
TEKD+EK+LV + K G G PDRLI+ P G + ++EVK P RL Q
Sbjct: 1 MTEKDIEKQLVVSTRTAGGMAPKLVSPGFDGIPDRLILMPGGRIGFVEVKAPGKRLRPLQ 60
Query: 69 MSEIEELRRRGQRVKVLVSMEEVDNFLEELAC 100
+L G VL +E++ L +
Sbjct: 61 EKRKRQLEALGFSAFVLDGVEQIPEILTAIQG 92
>gi|313895645|ref|ZP_07829201.1| conserved hypothetical protein [Selenomonas sp. oral taxon 137 str.
F0430]
gi|312975771|gb|EFR41230.1| conserved hypothetical protein [Selenomonas sp. oral taxon 137 str.
F0430]
Length = 122
Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats.
Identities = 28/90 (31%), Positives = 42/90 (46%)
Query: 9 QTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQ 68
E D+EK K K G G PDRL++ P G + ++E+K P + Q
Sbjct: 33 MRESDLEKFTRLYIKLHGGLALKFISPGCAGVPDRLVLMPGGKMCFMELKAPGRKPRPLQ 92
Query: 69 MSEIEELRRRGQRVKVLVSMEEVDNFLEEL 98
+ IE+LR G +V V+ EE+ + L
Sbjct: 93 VRRIEQLRALGFKVYVVDGKEEIGGIINAL 122
>gi|331085753|ref|ZP_08334836.1| hypothetical protein HMPREF0987_01139 [Lachnospiraceae bacterium
9_1_43BFAA]
gi|330406676|gb|EGG86181.1| hypothetical protein HMPREF0987_01139 [Lachnospiraceae bacterium
9_1_43BFAA]
Length = 94
Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats.
Identities = 30/90 (33%), Positives = 45/90 (50%)
Query: 10 TEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQM 69
+EK +E++L T KK+ W K S G G PDRL++ P G L ++E+K P ++ Q
Sbjct: 3 SEKSIEQKLRTETKKMGGWAVKFSSPGLDGMPDRLVLFPGGKLGFVELKAPGKKMRPLQE 62
Query: 70 SEIEELRRRGQRVKVLVSMEEVDNFLEELA 99
L G V + S E + L E+
Sbjct: 63 KRKRTLEELGFLVFCVDSKEMIGGVLHEIR 92
>gi|291283831|ref|YP_003500649.1| Phage associated protein [Escherichia coli O55:H7 str. CB9615]
gi|290763704|gb|ADD57665.1| Phage associated protein [Escherichia coli O55:H7 str. CB9615]
Length = 89
Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats.
Identities = 30/81 (37%), Positives = 39/81 (48%)
Query: 8 YQTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQ 67
Y+ E +EK LV KK K RR PDR+++ P G L ++E K P
Sbjct: 3 YERENLIEKHLVAEVKKAGGVAFKFISPSRRSVPDRIVLLPGGRLVFVECKSPGKPPRPD 62
Query: 68 QMSEIEELRRRGQRVKVLVSM 88
Q+ E E LR+ G V VL S
Sbjct: 63 QLREHERLRKLGFTVVVLDSK 83
>gi|237738631|ref|ZP_04569112.1| conserved hypothetical protein [Fusobacterium sp. 2_1_31]
gi|229424114|gb|EEO39161.1| conserved hypothetical protein [Fusobacterium sp. 2_1_31]
Length = 102
Score = 121 bits (305), Expect = 2e-26, Method: Composition-based stats.
Identities = 30/92 (32%), Positives = 52/92 (56%), Gaps = 2/92 (2%)
Query: 9 QTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGR--LSH 66
++E+++E LV K + K + G G PDR++I P G ++++E+K R LS
Sbjct: 3 KSEREIEAYLVKSIKNKNGLCMKWTSPGNAGVPDRIVIVPGGDVYFVELKAEGKREDLSP 62
Query: 67 QQMSEIEELRRRGQRVKVLVSMEEVDNFLEEL 98
Q + I +L+ +V+ S +EVD F+EE+
Sbjct: 63 LQRNFINKLKNLNCDARVIASFKEVDEFIEEV 94
>gi|259502600|ref|ZP_05745502.1| hypothetical protein HMPREF0494_0896 [Lactobacillus antri DSM
16041]
gi|259169415|gb|EEW53910.1| hypothetical protein HMPREF0494_0896 [Lactobacillus antri DSM
16041]
Length = 93
Score = 121 bits (305), Expect = 2e-26, Method: Composition-based stats.
Identities = 21/93 (22%), Positives = 42/93 (45%)
Query: 9 QTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQ 68
EK +E V + K G PDRL++ P+G + ++E+K P Q
Sbjct: 1 MLEKQIETAFVKATHQRGGLCLKFISPSMAGVPDRLVLLPDGHMGFVEMKAPGKHPRPLQ 60
Query: 69 MSEIEELRRRGQRVKVLVSMEEVDNFLEELACT 101
+ + +L++ G +V V ++++ L+ +
Sbjct: 61 VQRLNQLKQLGFQVFVCDQLDQIGGMLDAIQTA 93
>gi|227544669|ref|ZP_03974718.1| phage associated protein [Lactobacillus reuteri CF48-3A]
gi|300909416|ref|ZP_07126877.1| VRR-NUC domain protein [Lactobacillus reuteri SD2112]
gi|227185351|gb|EEI65422.1| phage associated protein [Lactobacillus reuteri CF48-3A]
gi|300893281|gb|EFK86640.1| VRR-NUC domain protein [Lactobacillus reuteri SD2112]
Length = 148
Score = 121 bits (305), Expect = 3e-26, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 42/94 (44%)
Query: 8 YQTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQ 67
EK +E V + K + G PDRL++ P+G + ++E+K P
Sbjct: 55 QMLEKQIETTFVKATHQRGGLCLKFTSPSMAGVPDRLVLLPDGHMGFVEMKAPGKHPRPL 114
Query: 68 QMSEIEELRRRGQRVKVLVSMEEVDNFLEELACT 101
Q+ + +L++ G +V V +++ L+ +
Sbjct: 115 QVQRLNQLKQLGYQVFVCDQFDQIGGMLDAIQTA 148
>gi|197303502|ref|ZP_03168541.1| hypothetical protein RUMLAC_02224 [Ruminococcus lactaris ATCC
29176]
gi|197297500|gb|EDY32061.1| hypothetical protein RUMLAC_02224 [Ruminococcus lactaris ATCC
29176]
Length = 92
Score = 121 bits (304), Expect = 4e-26, Method: Composition-based stats.
Identities = 27/93 (29%), Positives = 48/93 (51%), Gaps = 1/93 (1%)
Query: 9 QTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQ 68
EK +E++LV KK K + G G PDR+++ P+G + ++EVK P + Q
Sbjct: 1 MREKYIEQKLVREVKKRGGLCEKWNS-GSSGWPDRIVLLPDGKIGFVEVKAPGEKSRKLQ 59
Query: 69 MSEIEELRRRGQRVKVLVSMEEVDNFLEELACT 101
+ ++LR G +V VL M ++ ++ +
Sbjct: 60 VHRHDQLRALGYKVFVLDDMGQIGGIIDAIQTA 92
>gi|325687763|gb|EGD29784.1| VRR-NUC domain protein [Streptococcus sanguinis SK72]
Length = 103
Score = 121 bits (304), Expect = 4e-26, Method: Composition-based stats.
Identities = 25/92 (27%), Positives = 48/92 (52%)
Query: 9 QTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQ 68
E+++E++L ++K K G G PDR+++ P G L ++E+K P + Q
Sbjct: 1 MREREIEEKLRVESQKRGGLAMKFVSPGLIGVPDRIVVLPQGRLGFVELKAPGEKPRKIQ 60
Query: 69 MSEIEELRRRGQRVKVLVSMEEVDNFLEELAC 100
+ +E+LR+ G V VL ++ L+++
Sbjct: 61 VRRMEQLRKLGFLVYVLDDKGKIGEILDDIQG 92
>gi|227544672|ref|ZP_03974721.1| phage associated protein [Lactobacillus reuteri CF48-3A]
gi|300909461|ref|ZP_07126922.1| VRR-NUC domain protein [Lactobacillus reuteri SD2112]
gi|227185348|gb|EEI65419.1| phage associated protein [Lactobacillus reuteri CF48-3A]
gi|300893326|gb|EFK86685.1| VRR-NUC domain protein [Lactobacillus reuteri SD2112]
Length = 148
Score = 120 bits (303), Expect = 5e-26, Method: Composition-based stats.
Identities = 22/94 (23%), Positives = 41/94 (43%)
Query: 8 YQTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQ 67
EK +E V + K G PDRL++ P+G + ++E+K P R
Sbjct: 55 QMLEKQIETAFVKATHQRGGLCLKFISPSMAGVPDRLVLLPDGHMGFVEMKAPGKRPRPL 114
Query: 68 QMSEIEELRRRGQRVKVLVSMEEVDNFLEELACT 101
Q+ + +L++ G +V V ++ L+ +
Sbjct: 115 QVQRLSQLKQLGYQVFVCDQFGQIGGMLDAIQTA 148
>gi|225405818|ref|ZP_03761007.1| hypothetical protein CLOSTASPAR_05039 [Clostridium asparagiforme
DSM 15981]
gi|225042658|gb|EEG52904.1| hypothetical protein CLOSTASPAR_05039 [Clostridium asparagiforme
DSM 15981]
Length = 96
Score = 120 bits (302), Expect = 5e-26, Method: Composition-based stats.
Identities = 35/92 (38%), Positives = 50/92 (54%)
Query: 9 QTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQ 68
EKD+E++LV G K+L K + G G PDR++ P +E+K TG+LS Q
Sbjct: 1 MREKDIEQKLVQGVKRLGGRAFKWTSPGNDGVPDRIVFLPGRPPVLVELKTDTGKLSALQ 60
Query: 69 MSEIEELRRRGQRVKVLVSMEEVDNFLEELAC 100
+I LR GQ V+VL +++V FL E
Sbjct: 61 RIQIGRLRDLGQDVRVLYGLDQVLEFLNECGG 92
>gi|319757799|gb|ADV69741.1| hypothetical protein SSUJS14_0650 [Streptococcus suis JS14]
Length = 93
Score = 119 bits (300), Expect = 9e-26, Method: Composition-based stats.
Identities = 29/93 (31%), Positives = 41/93 (44%)
Query: 9 QTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQ 68
EK VE+ LV K K G PDRL+ PNG +EVK P + Q
Sbjct: 1 MREKYVEQALVKSVKARGGICPKWVSPSFSGVPDRLVFLPNGKFGLVEVKAPDQKPRMLQ 60
Query: 69 MSEIEELRRRGQRVKVLVSMEEVDNFLEELACT 101
+S + + G V V+ +E + L+E+ T
Sbjct: 61 VSRHKLFEQLGFTVYVIDRIEMIGEVLDEIDIT 93
>gi|50914496|ref|YP_060468.1| hypothetical protein M6_Spy1150 [Streptococcus pyogenes MGAS10394]
gi|40218554|gb|AAR83208.1| hypothetical protein [Streptococcus pyogenes]
gi|50261599|gb|AAT72367.1| unknown [Streptococcus pyogenes]
gi|50903570|gb|AAT87285.1| Phage-related protein [Streptococcus pyogenes MGAS10394]
Length = 100
Score = 119 bits (300), Expect = 9e-26, Method: Composition-based stats.
Identities = 30/96 (31%), Positives = 42/96 (43%)
Query: 6 FHYQTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLS 65
F EK VE+ LV K K G PDRL+ P G +EVK P +
Sbjct: 5 FRTMREKYVEQALVKSVKARGGICPKWVSPSFSGVPDRLVFLPKGKFGLVEVKAPDQKPR 64
Query: 66 HQQMSEIEELRRRGQRVKVLVSMEEVDNFLEELACT 101
Q+S + R G +V V+ +E + L+E+ T
Sbjct: 65 KLQVSRHKLFERLGFKVYVIDRIEMIGEVLDEIDIT 100
>gi|76787039|ref|YP_329360.1| hypothetical protein SAK_0732 [Streptococcus agalactiae A909]
gi|76562096|gb|ABA44680.1| conserved hypothetical protein [Streptococcus agalactiae A909]
Length = 93
Score = 119 bits (300), Expect = 1e-25, Method: Composition-based stats.
Identities = 28/93 (30%), Positives = 44/93 (47%)
Query: 9 QTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQ 68
EK VE++LV+ + K G PDRL+ P+G +EVK P + Q
Sbjct: 1 MREKVVERKLVSEVRNRGGICPKWVSPSFAGVPDRLVFLPSGKFGLVEVKAPGEKPRLLQ 60
Query: 69 MSEIEELRRRGQRVKVLVSMEEVDNFLEELACT 101
+S R G +V VL ++++ L+E+ T
Sbjct: 61 VSRHRLFERLGFKVHVLDRVDKIGEVLDEIETT 93
>gi|320530607|ref|ZP_08031659.1| VRR-NUC domain protein [Selenomonas artemidis F0399]
gi|320137134|gb|EFW29064.1| VRR-NUC domain protein [Selenomonas artemidis F0399]
Length = 123
Score = 119 bits (300), Expect = 1e-25, Method: Composition-based stats.
Identities = 29/92 (31%), Positives = 42/92 (45%)
Query: 6 FHYQTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLS 65
H E +E+ V KK K GR G PDR+++ P G + E+K P +L
Sbjct: 16 LHIDHESWIEQAFVREVKKRGGLALKFVSPGRVGVPDRIVLIPGGRCVFAEIKAPGKKLR 75
Query: 66 HQQMSEIEELRRRGQRVKVLVSMEEVDNFLEE 97
Q++ + G V V+ S+EEV F E
Sbjct: 76 KLQIAAHRVIHGFGLEVSVVSSLEEVKTFCER 107
>gi|227530257|ref|ZP_03960306.1| VRR_NUC domain protein [Lactobacillus vaginalis ATCC 49540]
gi|227349830|gb|EEJ40121.1| VRR_NUC domain protein [Lactobacillus vaginalis ATCC 49540]
Length = 93
Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats.
Identities = 22/93 (23%), Positives = 42/93 (45%)
Query: 9 QTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQ 68
EK +E V + K + G PDRL++ P+G + ++E+K P R Q
Sbjct: 1 MLEKRIETAFVKATHQRGGLCLKFTSPSMAGVPDRLVLLPDGHMGFVEMKAPGKRPRPLQ 60
Query: 69 MSEIEELRRRGQRVKVLVSMEEVDNFLEELACT 101
+ + +L++ G +V V ++ L+ +
Sbjct: 61 VQRLSQLKQLGYQVFVCDQFGQIGGMLDAIQTA 93
>gi|238018845|ref|ZP_04599271.1| hypothetical protein VEIDISOL_00705 [Veillonella dispar ATCC 17748]
gi|237864611|gb|EEP65901.1| hypothetical protein VEIDISOL_00705 [Veillonella dispar ATCC 17748]
Length = 110
Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats.
Identities = 32/93 (34%), Positives = 52/93 (55%)
Query: 11 EKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMS 70
EKD+E+ L KK+ C K G G PDR+I+ P GG+ ++E+K G+L Q
Sbjct: 2 EKDIERWLGNQLKKMGCIYMKFVSPGNDGVPDRIIVLPGGGVIFVELKDTNGKLMANQRV 61
Query: 71 EIEELRRRGQRVKVLVSMEEVDNFLEELACTLY 103
+I LR++G V V+ M + F+E++ ++
Sbjct: 62 QISRLRKQGALVFVVTGMPDAKLFVEDMERAIH 94
>gi|160935261|ref|ZP_02082644.1| hypothetical protein CLOBOL_00157 [Clostridium bolteae ATCC
BAA-613]
gi|158441992|gb|EDP19689.1| hypothetical protein CLOBOL_00157 [Clostridium bolteae ATCC
BAA-613]
Length = 97
Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats.
Identities = 27/94 (28%), Positives = 49/94 (52%)
Query: 9 QTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQ 68
EKD+E L +K+ K G G PDR+ I P+G +W++E+K+ G+++ Q
Sbjct: 1 MLEKDIEDWLNKQIEKMGGLAFKFVSPGNPGVPDRIYILPDGRVWFVELKQQLGKVARIQ 60
Query: 69 MSEIEELRRRGQRVKVLVSMEEVDNFLEELACTL 102
+ E L R G +++ M++ ++ E+ L
Sbjct: 61 KWQRERLIRLGCNYRLVKGMDDARAYVGEMRDAL 94
>gi|254975144|ref|ZP_05271616.1| VRR-NUC domain-containing protein [Clostridium difficile QCD-66c26]
gi|255092534|ref|ZP_05322012.1| VRR-NUC domain-containing protein [Clostridium difficile CIP
107932]
gi|255306561|ref|ZP_05350732.1| VRR-NUC domain-containing protein [Clostridium difficile ATCC
43255]
gi|255314271|ref|ZP_05355854.1| VRR-NUC domain-containing protein [Clostridium difficile QCD-76w55]
gi|255516951|ref|ZP_05384627.1| VRR-NUC domain-containing protein [Clostridium difficile QCD-97b34]
gi|255650053|ref|ZP_05396955.1| VRR-NUC domain-containing protein [Clostridium difficile QCD-37x79]
gi|306519588|ref|ZP_07405935.1| phage-like protein [Clostridium difficile QCD-32g58]
Length = 108
Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats.
Identities = 29/92 (31%), Positives = 51/92 (55%)
Query: 9 QTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQ 68
E +EKRL + L K G G PDR+++ P G + ++E+K P +L Q
Sbjct: 1 MLESKIEKRLKKEIELLGGKAMKFISPGEAGVPDRIVLLPEGHVIFVELKAPGKKLRKLQ 60
Query: 69 MSEIEELRRRGQRVKVLVSMEEVDNFLEELAC 100
++ ELR G +VK + +++E+D+F++E+
Sbjct: 61 QYKMRELRELGFKVKCVSTLKEIDDFIKEVKG 92
>gi|266623805|ref|ZP_06116740.1| putative protein p44 [Clostridium hathewayi DSM 13479]
gi|288864377|gb|EFC96675.1| putative protein p44 [Clostridium hathewayi DSM 13479]
Length = 111
Score = 118 bits (297), Expect = 2e-25, Method: Composition-based stats.
Identities = 38/94 (40%), Positives = 49/94 (52%)
Query: 9 QTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQ 68
EKD+EK LV KKL K G G PDR++I P ++E+K GRLS Q
Sbjct: 1 MLEKDIEKILVNEVKKLGGRAYKWVSPGNDGVPDRIVILPGLRPVFVELKTEKGRLSAIQ 60
Query: 69 MSEIEELRRRGQRVKVLVSMEEVDNFLEELACTL 102
+IE L++ Q V VL +V +FLEE L
Sbjct: 61 RVQIERLKKMKQDVSVLYGEPQVRDFLEECKHRL 94
>gi|238854133|ref|ZP_04644480.1| phage associated protein [Lactobacillus gasseri 202-4]
gi|238833209|gb|EEQ25499.1| phage associated protein [Lactobacillus gasseri 202-4]
Length = 93
Score = 118 bits (297), Expect = 2e-25, Method: Composition-based stats.
Identities = 22/93 (23%), Positives = 42/93 (45%)
Query: 9 QTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQ 68
EK +E V ++ K + G PDRL++ P G + ++E+K P Q
Sbjct: 1 MLEKRIESAFVKATQQRGGLCLKFTSPSMTGVPDRLVLLPEGHMGFVEMKSPGKHPRPLQ 60
Query: 69 MSEIEELRRRGQRVKVLVSMEEVDNFLEELACT 101
+ + +L++ G +V V E++ L+ +
Sbjct: 61 IQRLSQLKQLGYQVFVCDQFEQIGGMLDAIQAA 93
>gi|262113724|emb|CAR95391.1| hypothetical protein [Streptococcus phage phi-m46.1]
Length = 93
Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats.
Identities = 30/93 (32%), Positives = 40/93 (43%)
Query: 9 QTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQ 68
EK VE+ LV K K G PDRL+ PNG EVK P + Q
Sbjct: 1 MREKYVEQALVKSVKARGGICPKWVSPSFSGVPDRLVFLPNGKFGLAEVKAPDQKPRKLQ 60
Query: 69 MSEIEELRRRGQRVKVLVSMEEVDNFLEELACT 101
S + R G +V V+ +E + L+E+ T
Sbjct: 61 GSRHKLFERLGFKVYVIDRIEMIGEVLDEIDIT 93
>gi|312897718|ref|ZP_07757134.1| VRR-NUC domain protein [Megasphaera micronuciformis F0359]
gi|310621102|gb|EFQ04646.1| VRR-NUC domain protein [Megasphaera micronuciformis F0359]
Length = 111
Score = 117 bits (295), Expect = 3e-25, Method: Composition-based stats.
Identities = 33/88 (37%), Positives = 50/88 (56%)
Query: 9 QTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQ 68
E+D+EK+LV G KKL K G G PDR++I P+G + +IE+K G+LS Q
Sbjct: 16 MLERDIEKKLVAGVKKLGGRAYKFVSPGNIGVPDRIVIWPDGSIEFIELKTAKGQLSKTQ 75
Query: 69 MSEIEELRRRGQRVKVLVSMEEVDNFLE 96
++I L+ V +L M+ V+ +L
Sbjct: 76 ATQIARLQAMECNVHILYGMDAVNAYLN 103
>gi|134299060|ref|YP_001112556.1| hypothetical protein Dred_1197 [Desulfotomaculum reducens MI-1]
gi|134051760|gb|ABO49731.1| conserved hypothetical protein [Desulfotomaculum reducens MI-1]
Length = 93
Score = 117 bits (295), Expect = 4e-25, Method: Composition-based stats.
Identities = 21/90 (23%), Positives = 40/90 (44%)
Query: 9 QTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQ 68
E +E++ ++ K + G G PDR+++ P G ++E+K P Q
Sbjct: 1 MNEAQIERKFKREVERRGGKAWKFTSPGMSGVPDRIVLLPGGRSIFVELKAPGEEPRPLQ 60
Query: 69 MSEIEELRRRGQRVKVLVSMEEVDNFLEEL 98
+ +EL G V + S ++ F+ E+
Sbjct: 61 VKRAKELTELGFEVYCIDSFAAINKFVIEV 90
>gi|300856811|ref|YP_003781795.1| phage-like protein [Clostridium ljungdahlii DSM 13528]
gi|300436926|gb|ADK16693.1| phage related protein [Clostridium ljungdahlii DSM 13528]
Length = 91
Score = 117 bits (295), Expect = 4e-25, Method: Composition-based stats.
Identities = 28/91 (30%), Positives = 46/91 (50%)
Query: 9 QTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQ 68
E +EKRL +K+ K G G PDR+++ P+G + ++E+K P + Q
Sbjct: 1 MLESVIEKRLKKEIEKIGGKALKFVSPGMSGVPDRIVLLPHGKIIFVELKAPGKKRRKLQ 60
Query: 69 MSEIEELRRRGQRVKVLVSMEEVDNFLEELA 99
+EL G RV+ + S+ V F++EL
Sbjct: 61 EYRAKELNTLGFRVECIDSISGVKQFIKELR 91
>gi|116630099|ref|YP_815271.1| Phage associated protein [Lactobacillus gasseri ATCC 33323]
gi|116095681|gb|ABJ60833.1| Phage associated protein [Lactobacillus gasseri ATCC 33323]
Length = 103
Score = 117 bits (293), Expect = 6e-25, Method: Composition-based stats.
Identities = 22/93 (23%), Positives = 42/93 (45%)
Query: 9 QTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQ 68
EK +E V ++ K + G PDRL++ P G + ++E+K P Q
Sbjct: 11 MLEKRIESAFVKATQQRGGLCLKFTSPSMTGVPDRLVLLPEGHMGFVEMKSPGKHPRPLQ 70
Query: 69 MSEIEELRRRGQRVKVLVSMEEVDNFLEELACT 101
+ + +L++ G +V V E++ L+ +
Sbjct: 71 IQRLSQLKQLGYQVFVCDQFEQIGGMLDAIQAA 103
>gi|298346381|ref|YP_003719068.1| VRR-NUC domain-containing protein [Mobiluncus curtisii ATCC 43063]
gi|298236442|gb|ADI67574.1| VRR-NUC domain protein [Mobiluncus curtisii ATCC 43063]
Length = 93
Score = 117 bits (293), Expect = 6e-25, Method: Composition-based stats.
Identities = 23/93 (24%), Positives = 44/93 (47%)
Query: 9 QTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQ 68
E+ +E+ LV + L K G G PDR+++ P+G + ++EVK P G++ Q
Sbjct: 1 MKEQHLEQALVKTVEALGGVCWKLVSPGTAGVPDRIVLLPDGHVGFVEVKAPGGKVRAIQ 60
Query: 69 MSEIEELRRRGQRVKVLVSMEEVDNFLEELACT 101
+ +L+ G VL + +++ +
Sbjct: 61 KHRLRQLKHLGFTALVLNNPDDIKKVCHAIQAA 93
>gi|315654959|ref|ZP_07907864.1| VRR-NUC domain protein [Mobiluncus curtisii ATCC 51333]
gi|315490920|gb|EFU80540.1| VRR-NUC domain protein [Mobiluncus curtisii ATCC 51333]
Length = 93
Score = 116 bits (292), Expect = 8e-25, Method: Composition-based stats.
Identities = 23/93 (24%), Positives = 44/93 (47%)
Query: 9 QTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQ 68
E+ +E+ LV + L K G G PDR+++ P+G + ++EVK P G++ Q
Sbjct: 1 MKEQHLEQALVKTIEALGGVCWKLVSPGTAGVPDRIVLLPDGHVGFVEVKAPGGKVRAIQ 60
Query: 69 MSEIEELRRRGQRVKVLVSMEEVDNFLEELACT 101
+ +L+ G VL + +++ +
Sbjct: 61 KHRLRQLKHLGFTALVLNNPDDIKKVCHAIQAA 93
>gi|220930419|ref|YP_002507328.1| VRR-NUC domain protein [Clostridium cellulolyticum H10]
gi|220000747|gb|ACL77348.1| VRR-NUC domain protein [Clostridium cellulolyticum H10]
Length = 86
Score = 116 bits (292), Expect = 9e-25, Method: Composition-based stats.
Identities = 24/86 (27%), Positives = 35/86 (40%)
Query: 9 QTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQ 68
E +EK L + K G G PDR+ + P G + ++E K P + Q
Sbjct: 1 MRESKIEKTLKKSVEAKGGKCLKFVSPGMSGVPDRICLYPGGKIIFVETKAPNKKPRPLQ 60
Query: 69 MSEIEELRRRGQRVKVLVSMEEVDNF 94
ELR G V+V+ S E +
Sbjct: 61 EKRHNELRSLGFEVRVIDSEAEANEI 86
>gi|297585288|ref|YP_003701068.1| VRR-NUC domain-containing protein [Bacillus selenitireducens
MLS10]
gi|297143745|gb|ADI00503.1| VRR-NUC domain protein [Bacillus selenitireducens MLS10]
Length = 93
Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats.
Identities = 27/89 (30%), Positives = 42/89 (47%)
Query: 9 QTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQ 68
E+ +E+ K G G PDRL I P G + ++E+K+P G+ Q
Sbjct: 1 MEEQKLEQTFKRAVLNHGGLALKLITPGYAGIPDRLAILPGGRVAFVEMKRPGGKPRPLQ 60
Query: 69 MSEIEELRRRGQRVKVLVSMEEVDNFLEE 97
+ E+LR+ G V V+ S E + +L E
Sbjct: 61 VKRHEQLRQLGCDVAVIDSNERLGAWLAE 89
>gi|313896465|ref|ZP_07830016.1| VRR-NUC domain protein [Selenomonas sp. oral taxon 137 str.
F0430]
gi|312974889|gb|EFR40353.1| VRR-NUC domain protein [Selenomonas sp. oral taxon 137 str.
F0430]
Length = 93
Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats.
Identities = 28/90 (31%), Positives = 50/90 (55%)
Query: 9 QTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQ 68
E+ +E++L K + K + G G PDRL++ P G + ++E+K P + Q
Sbjct: 1 MYERTIEQKLAARVKAMGGIAPKFTSPGFDGMPDRLVLLPGGRMGFVELKTPGKKPRALQ 60
Query: 69 MSEIEELRRRGQRVKVLVSMEEVDNFLEEL 98
++ LRR G +V V+ +E++D+ LEE+
Sbjct: 61 LARHRLLRRLGFKVYVIDGIEQIDSVLEEI 90
>gi|258646423|ref|ZP_05733892.1| putative protein p44 [Dialister invisus DSM 15470]
gi|260403826|gb|EEW97373.1| putative protein p44 [Dialister invisus DSM 15470]
Length = 105
Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats.
Identities = 35/90 (38%), Positives = 50/90 (55%)
Query: 9 QTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQ 68
+E+D EK LV+ KKL K + G G PDR+II P G + ++E+K TG LS Q
Sbjct: 6 HSERDAEKLLVSKIKKLGGRAYKFTSPGSAGVPDRIIILPGGYVEFVEMKSETGMLSVLQ 65
Query: 69 MSEIEELRRRGQRVKVLVSMEEVDNFLEEL 98
I LR G V+VL ++VD ++ +
Sbjct: 66 KICISHLRSLGCHVEVLYGAKDVDTYVTRV 95
>gi|304436364|ref|ZP_07396340.1| VRR-NUC domain protein [Selenomonas sp. oral taxon 149 str.
67H29BP]
gi|304370633|gb|EFM24282.1| VRR-NUC domain protein [Selenomonas sp. oral taxon 149 str.
67H29BP]
Length = 93
Score = 114 bits (286), Expect = 4e-24, Method: Composition-based stats.
Identities = 29/92 (31%), Positives = 49/92 (53%)
Query: 9 QTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQ 68
EKD+EK L K + K + G G PDRL++ P G + ++E+K P + Q
Sbjct: 1 MREKDIEKELTARTKAMGGIAPKFTSPGFDGMPDRLVLLPRGRMEFVELKAPGRKPRPLQ 60
Query: 69 MSEIEELRRRGQRVKVLVSMEEVDNFLEELAC 100
++ LRR G +V V+ + ++D LE+++
Sbjct: 61 LARHRLLRRLGFKVYVIDEINQIDGVLEDISH 92
>gi|297242713|ref|ZP_06926651.1| hypothetical protein GVAMD_0725 [Gardnerella vaginalis AMD]
gi|296888924|gb|EFH27658.1| hypothetical protein GVAMD_0725 [Gardnerella vaginalis AMD]
Length = 96
Score = 114 bits (286), Expect = 4e-24, Method: Composition-based stats.
Identities = 22/94 (23%), Positives = 46/94 (48%)
Query: 8 YQTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQ 67
+ EK+ E++LV K K + G PDRL++ G + ++E+K P +
Sbjct: 3 FLREKETERKLVRDVKAAGGMAIKLTSPSVDGLPDRLVLLNGGKIGFVELKAPGKKPRVL 62
Query: 68 QMSEIEELRRRGQRVKVLVSMEEVDNFLEELACT 101
Q+ +++L+ G +V V+ ++ ++ + T
Sbjct: 63 QVKRMKDLQALGFKVFVVDEKSQIGGVIDAIRAT 96
>gi|41179403|ref|NP_958712.1| Bbp43 [Bordetella phage BPP-1]
gi|45569536|ref|NP_996605.1| hypothetical protein BMP-1p42 [Bordetella phage BMP-1]
gi|45580787|ref|NP_996653.1| hypothetical protein BIP-1p42 [Bordetella phage BIP-1]
gi|40950142|gb|AAR97708.1| Bbp43 [Bordetella phage BPP-1]
Length = 87
Score = 114 bits (286), Expect = 4e-24, Method: Composition-based stats.
Identities = 38/87 (43%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Query: 9 QTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQ 68
E D+EK LV +KL VRK ++GR G PDRL++ P+ W+E+K P + Q
Sbjct: 1 MRESDIEKYLVERVRKLGGEVRKVRWIGRNGAPDRLVMLPD-RTVWVELKAPGEKCRPHQ 59
Query: 69 MSEIEELRRRGQRVKVLVSMEEVDNFL 95
+ E E +RR GQRV V+ S E VD L
Sbjct: 60 IREHERMRRMGQRVAVVDSHEGVDEVL 86
>gi|28198297|ref|NP_778611.1| hypothetical protein PD0380 [Xylella fastidiosa Temecula1]
gi|182680934|ref|YP_001829094.1| VRR-NUC domain-containing protein [Xylella fastidiosa M23]
gi|28056367|gb|AAO28260.1| phage-related protein [Xylella fastidiosa Temecula1]
gi|182631044|gb|ACB91820.1| VRR-NUC domain protein [Xylella fastidiosa M23]
gi|307579402|gb|ADN63371.1| VRR-NUC domain-containing protein [Xylella fastidiosa subsp.
fastidiosa GB514]
Length = 92
Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats.
Identities = 32/86 (37%), Positives = 49/86 (56%)
Query: 10 TEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQM 69
E+ +E+ LV + +RK + GR G PDR+ + PNG W+E+K P + + Q+
Sbjct: 6 RERTIERYLVAQVRAKGGEIRKVKWEGRHGAPDRIAMLPNGRTLWVELKAPGQQCTPHQV 65
Query: 70 SEIEELRRRGQRVKVLVSMEEVDNFL 95
E E +R GQRV V+ S++ VD L
Sbjct: 66 REHERMRGMGQRVVVVDSLKGVDEVL 91
>gi|15837284|ref|NP_297972.1| hypothetical protein XF0682 [Xylella fastidiosa 9a5c]
gi|15838883|ref|NP_299571.1| hypothetical protein XF2292 [Xylella fastidiosa 9a5c]
gi|15839116|ref|NP_299804.1| hypothetical protein XF2526 [Xylella fastidiosa 9a5c]
gi|9105564|gb|AAF83492.1|AE003912_4 phage-related protein [Xylella fastidiosa 9a5c]
gi|9107456|gb|AAF85091.1|AE004041_3 phage-related protein [Xylella fastidiosa 9a5c]
gi|9107732|gb|AAF85324.1|AE004059_14 phage-related protein [Xylella fastidiosa 9a5c]
Length = 92
Score = 114 bits (285), Expect = 5e-24, Method: Composition-based stats.
Identities = 31/90 (34%), Positives = 49/90 (54%)
Query: 6 FHYQTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLS 65
+ E+ +E+ LV + +RK + GR G PDR+ + PNG W+E+K P + +
Sbjct: 2 MNIPRERTIERYLVAQVRAKGGEIRKVKWGGRHGAPDRIAMLPNGRTLWVELKAPGKQCT 61
Query: 66 HQQMSEIEELRRRGQRVKVLVSMEEVDNFL 95
Q+ E +RR GQ V V+ S++ VD L
Sbjct: 62 PHQVREHARMRRMGQHVVVVDSLKGVDEVL 91
>gi|257088836|ref|ZP_05583197.1| predicted protein [Enterococcus faecalis CH188]
gi|256997648|gb|EEU84168.1| predicted protein [Enterococcus faecalis CH188]
Length = 132
Score = 114 bits (285), Expect = 5e-24, Method: Composition-based stats.
Identities = 28/92 (30%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 9 QTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQ 68
Q E D+EK L+ K+ K + G RG PDR+I+ G ++++E+K+P G+ Q
Sbjct: 28 QIENDIEKYLIRQIKRTGALCYKFTSPGTRGVPDRIILY-QGNVFFVELKRPGGKPRKDQ 86
Query: 69 MSEIEELRRRGQRVKVLVSMEEVDNFLEELAC 100
+ IE+ + + V V+ S + VD + +
Sbjct: 87 LKIIEKFKEQLIPVFVIDSKQGVDTLIYAMQS 118
>gi|227520160|ref|ZP_03950209.1| VRR-NUC domain protein [Enterococcus faecalis TX0104]
gi|227072405|gb|EEI10368.1| VRR-NUC domain protein [Enterococcus faecalis TX0104]
gi|315160594|gb|EFU04611.1| VRR-NUC domain protein [Enterococcus faecalis TX0645]
gi|315574063|gb|EFU86254.1| VRR-NUC domain protein [Enterococcus faecalis TX0309B]
gi|315579440|gb|EFU91631.1| VRR-NUC domain protein [Enterococcus faecalis TX0630]
gi|315582008|gb|EFU94199.1| VRR-NUC domain protein [Enterococcus faecalis TX0309A]
Length = 127
Score = 114 bits (285), Expect = 6e-24, Method: Composition-based stats.
Identities = 28/92 (30%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 9 QTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQ 68
Q E D+EK L+ K+ K + G RG PDR+I+ G ++++E+K+P G+ Q
Sbjct: 23 QIENDIEKYLIRQIKRTGALCYKFTSPGTRGVPDRIILY-QGNVFFVELKRPGGKPRKDQ 81
Query: 69 MSEIEELRRRGQRVKVLVSMEEVDNFLEELAC 100
+ IE+ + + V V+ S + VD + +
Sbjct: 82 LKIIEKFKEQLIPVFVIDSKQGVDTLIYAMQS 113
>gi|28199027|ref|NP_779341.1| hypothetical protein PD1135 [Xylella fastidiosa Temecula1]
gi|28199080|ref|NP_779394.1| hypothetical protein PD1192 [Xylella fastidiosa Temecula1]
gi|28199603|ref|NP_779917.1| hypothetical protein PD1728 [Xylella fastidiosa Temecula1]
gi|182681749|ref|YP_001829909.1| VRR-NUC domain-containing protein [Xylella fastidiosa M23]
gi|182681806|ref|YP_001829966.1| VRR-NUC domain-containing protein [Xylella fastidiosa M23]
gi|28057125|gb|AAO28990.1| phage-related protein [Xylella fastidiosa Temecula1]
gi|28057178|gb|AAO29043.1| phage-related protein [Xylella fastidiosa Temecula1]
gi|28057718|gb|AAO29566.1| phage-related protein [Xylella fastidiosa Temecula1]
gi|182631859|gb|ACB92635.1| VRR-NUC domain protein [Xylella fastidiosa M23]
gi|182631916|gb|ACB92692.1| VRR-NUC domain protein [Xylella fastidiosa M23]
gi|307578625|gb|ADN62594.1| VRR-NUC domain-containing protein [Xylella fastidiosa subsp.
fastidiosa GB514]
gi|307580178|gb|ADN64147.1| VRR-NUC domain-containing protein [Xylella fastidiosa subsp.
fastidiosa GB514]
gi|307580242|gb|ADN64211.1| VRR-NUC domain-containing protein [Xylella fastidiosa subsp.
fastidiosa GB514]
Length = 92
Score = 113 bits (284), Expect = 8e-24, Method: Composition-based stats.
Identities = 32/86 (37%), Positives = 49/86 (56%)
Query: 10 TEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQM 69
E+ +E+ LV + +RK + GR G PDR+ + PNG W+E+K P + + Q+
Sbjct: 6 RERTIERYLVAQVRAKGGEIRKVKWGGRHGAPDRIAMLPNGRTLWVELKAPGQQCTPHQV 65
Query: 70 SEIEELRRRGQRVKVLVSMEEVDNFL 95
E E +R GQRV V+ S++ VD L
Sbjct: 66 REHERMRGMGQRVVVVDSLKGVDEVL 91
>gi|182682344|ref|YP_001830504.1| VRR-NUC domain-containing protein [Xylella fastidiosa M23]
gi|273810425|ref|YP_003344896.1| putative nuclease [Xylella phage Xfas53]
gi|182632454|gb|ACB93230.1| VRR-NUC domain protein [Xylella fastidiosa M23]
gi|257097800|gb|ACV41106.1| putative nuclease [Xylella phage Xfas53]
Length = 91
Score = 113 bits (284), Expect = 8e-24, Method: Composition-based stats.
Identities = 32/86 (37%), Positives = 49/86 (56%)
Query: 10 TEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQM 69
E+ +E+ LV + +RK + GR G PDR+ + PNG W+E+K P + + Q+
Sbjct: 5 RERTIERYLVAQVRAKGGEIRKVKWGGRHGAPDRIAMLPNGRTLWVELKAPGQQCTPHQV 64
Query: 70 SEIEELRRRGQRVKVLVSMEEVDNFL 95
E E +R GQRV V+ S++ VD L
Sbjct: 65 REHERMRGMGQRVVVVDSLKGVDEVL 90
>gi|71274494|ref|ZP_00650782.1| phage-related protein [Xylella fastidiosa Dixon]
gi|71900323|ref|ZP_00682458.1| phage-related protein [Xylella fastidiosa Ann-1]
gi|71164226|gb|EAO13940.1| phage-related protein [Xylella fastidiosa Dixon]
gi|71729898|gb|EAO31994.1| phage-related protein [Xylella fastidiosa Ann-1]
Length = 92
Score = 113 bits (283), Expect = 9e-24, Method: Composition-based stats.
Identities = 33/90 (36%), Positives = 49/90 (54%)
Query: 6 FHYQTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLS 65
+ E+ +E+ LV + +RK + GR G PDR+ + P G W+E+K P + +
Sbjct: 2 MNIPRERTIERYLVAQVRAKGGEIRKVKWGGRHGAPDRIAMLPEGRTLWVELKAPGQQCT 61
Query: 66 HQQMSEIEELRRRGQRVKVLVSMEEVDNFL 95
Q+ E E LRR GQRV V+ S + VD L
Sbjct: 62 PHQVREHERLRRMGQRVVVVDSFKGVDEVL 91
>gi|71276268|ref|ZP_00652546.1| phage-related protein [Xylella fastidiosa Dixon]
gi|71902065|ref|ZP_00684105.1| phage-related protein [Xylella fastidiosa Ann-1]
gi|71162876|gb|EAO12600.1| phage-related protein [Xylella fastidiosa Dixon]
gi|71728176|gb|EAO30367.1| phage-related protein [Xylella fastidiosa Ann-1]
Length = 92
Score = 113 bits (283), Expect = 9e-24, Method: Composition-based stats.
Identities = 33/90 (36%), Positives = 50/90 (55%)
Query: 6 FHYQTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLS 65
+ E+ +E+ LV + +RK + GR G PDR+ + P G W+E+K P + +
Sbjct: 2 MNIPRERTIERYLVAQVRAKGGEIRKVKWGGRHGAPDRIAMLPEGRTLWVELKAPGQQCT 61
Query: 66 HQQMSEIEELRRRGQRVKVLVSMEEVDNFL 95
Q+ E E LRR GQRV V+ S++ VD L
Sbjct: 62 PHQVREHERLRRMGQRVVVVDSLKGVDEVL 91
>gi|29374968|ref|NP_814121.1| hypothetical protein EF0329 [Enterococcus faecalis V583]
gi|29342426|gb|AAO80192.1| conserved hypothetical protein [Enterococcus faecalis V583]
Length = 106
Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats.
Identities = 29/92 (31%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 9 QTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQ 68
Q E D+EK LV K++ K + G RG PDR+I+ G ++++E+K+P G+ Q
Sbjct: 2 QIENDIEKYLVRQIKRIGALCYKFTSPGTRGVPDRIILY-QGNVFFVELKRPGGKPRKDQ 60
Query: 69 MSEIEELRRRGQRVKVLVSMEEVDNFLEELAC 100
+ IE+ + + V V+ S + VD + +
Sbjct: 61 LKIIEKFKEQLIPVFVIDSKQGVDMLIYAMQS 92
>gi|293400002|ref|ZP_06644148.1| hypothetical protein HMPREF0863_00285 [Erysipelotrichaceae
bacterium 5_2_54FAA]
gi|291306402|gb|EFE47645.1| hypothetical protein HMPREF0863_00285 [Erysipelotrichaceae
bacterium 5_2_54FAA]
Length = 106
Score = 112 bits (282), Expect = 1e-23, Method: Composition-based stats.
Identities = 34/91 (37%), Positives = 51/91 (56%), Gaps = 2/91 (2%)
Query: 9 QTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKP-TGRLSHQ 67
E+ VEK L L K + G G PDR+II NG + ++E+K+P GR+S
Sbjct: 10 DPERQVEKYLTDKISNLGGLPWKFTSPGTAGVPDRIIIM-NGLICFVELKRPRGGRISDM 68
Query: 68 QMSEIEELRRRGQRVKVLVSMEEVDNFLEEL 98
Q IE+LR++G + V+ + EEVD +E +
Sbjct: 69 QQWRIEQLRKQGMKAYVIKNKEEVDYLVEHM 99
>gi|94989080|ref|YP_597181.1| hypothetical protein MGAS9429_Spy1450 [Streptococcus pyogenes
MGAS9429]
gi|94542588|gb|ABF32637.1| phage-related protein [Streptococcus pyogenes MGAS9429]
Length = 97
Score = 112 bits (282), Expect = 1e-23, Method: Composition-based stats.
Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 4/91 (4%)
Query: 9 QTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQ 68
+TEKD+E L K K + G G PDR+++ G +++EVK P + Q
Sbjct: 8 RTEKDIENYLKKKTK---GLCLKFTSPGTIGVPDRIVVMNTG-TFFVEVKAPGKKPRPSQ 63
Query: 69 MSEIEELRRRGQRVKVLVSMEEVDNFLEELA 99
++ ++++ GQ V V+ S E VD L+E+
Sbjct: 64 VAMHKKIKEAGQHVWVVDSYESVDMALKEMG 94
>gi|227496459|ref|ZP_03926743.1| VRR-NUC domain protein [Actinomyces urogenitalis DSM 15434]
gi|226834015|gb|EEH66398.1| VRR-NUC domain protein [Actinomyces urogenitalis DSM 15434]
Length = 93
Score = 112 bits (282), Expect = 1e-23, Method: Composition-based stats.
Identities = 26/93 (27%), Positives = 38/93 (40%)
Query: 9 QTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQ 68
E+ VE LV + K G G PDRL++ P G + +EVK P R Q
Sbjct: 1 MRERAVEAALVREVRARGGLCWKLVSPGTVGVPDRLVLLPAGHVGLVEVKAPGERPRAVQ 60
Query: 69 MSEIEELRRRGQRVKVLVSMEEVDNFLEELACT 101
I+++R G VL +V + +
Sbjct: 61 RVRIDQVRALGTPCLVLDDPAKVGEVCDAICSA 93
>gi|225220077|ref|YP_002720044.1| hypothetical protein EpSSL_gp05 [Enterobacteria phage SSL-2009a]
gi|224986018|gb|ACN74582.1| hypothetical protein [Enterobacteria phage SSL-2009a]
Length = 92
Score = 112 bits (282), Expect = 1e-23, Method: Composition-based stats.
Identities = 30/91 (32%), Positives = 52/91 (57%), Gaps = 1/91 (1%)
Query: 10 TEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQM 69
E ++ L+ K + + RK ++ GR G PD +II NG + ++EVK+P G+ Q+
Sbjct: 3 PEGRIQIYLMKQVKAVGGFCRKVAWEGRAGAPDLIIII-NGKIVFVEVKRPGGKPKPHQI 61
Query: 70 SEIEELRRRGQRVKVLVSMEEVDNFLEELAC 100
E E + RRG V+V+ ++++ D + EL
Sbjct: 62 REHERMARRGADVRVIDNIDDCDLLVAELVA 92
>gi|71901492|ref|ZP_00683579.1| phage-related protein [Xylella fastidiosa Ann-1]
gi|71728748|gb|EAO30892.1| phage-related protein [Xylella fastidiosa Ann-1]
Length = 92
Score = 112 bits (282), Expect = 1e-23, Method: Composition-based stats.
Identities = 32/86 (37%), Positives = 48/86 (55%)
Query: 10 TEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQM 69
E+ +E+ LV K +RK + GR G PDR+ + P G W+E+K P + + Q+
Sbjct: 6 RERTIERYLVAQVKAKGGEIRKVKWGGRHGAPDRIAMLPEGRTLWVELKAPGQQCTPHQV 65
Query: 70 SEIEELRRRGQRVKVLVSMEEVDNFL 95
E E +R GQRV V+ S++ VD L
Sbjct: 66 REHERMRGMGQRVVVVDSLKGVDEVL 91
>gi|273810590|ref|YP_003344971.1| gp36 [Sodalis phage SO-1]
gi|258619875|gb|ACV84128.1| gp36 [Sodalis phage SO-1]
Length = 92
Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats.
Identities = 30/91 (32%), Positives = 52/91 (57%), Gaps = 1/91 (1%)
Query: 10 TEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQM 69
E ++ L+ K++ + RK ++ GR G PD +II NG + ++EVK+P G+ Q+
Sbjct: 3 PEGKIQSHLMRRVKEVGGFCRKLAWEGRAGAPDLIIII-NGKIVFVEVKRPGGKPKPHQV 61
Query: 70 SEIEELRRRGQRVKVLVSMEEVDNFLEELAC 100
E E + RRG V+V+ ++ + D + EL
Sbjct: 62 REHERMARRGADVRVIDNISDCDLLVAELVA 92
>gi|71899885|ref|ZP_00682033.1| phage-related protein [Xylella fastidiosa Ann-1]
gi|71730325|gb|EAO32408.1| phage-related protein [Xylella fastidiosa Ann-1]
Length = 92
Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats.
Identities = 32/86 (37%), Positives = 49/86 (56%)
Query: 10 TEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQM 69
E+ +E+ LV + +RK + GR G PDR+ + P G W+E+K P + + Q+
Sbjct: 6 RERTIERYLVAQVRAKGGEIRKVKWGGRHGAPDRIAMLPEGRTLWVELKAPGQQCTPHQV 65
Query: 70 SEIEELRRRGQRVKVLVSMEEVDNFL 95
E E +RR GQRV V+ S++ VD L
Sbjct: 66 REHERMRRMGQRVVVVDSLKGVDEVL 91
>gi|71275470|ref|ZP_00651756.1| phage-related protein [Xylella fastidiosa Dixon]
gi|71276172|ref|ZP_00652452.1| phage-related protein [Xylella fastidiosa Dixon]
gi|71898327|ref|ZP_00680500.1| phage-related protein [Xylella fastidiosa Ann-1]
gi|71900966|ref|ZP_00683079.1| phage-related protein [Xylella fastidiosa Ann-1]
gi|71163090|gb|EAO12812.1| phage-related protein [Xylella fastidiosa Dixon]
gi|71163770|gb|EAO13486.1| phage-related protein [Xylella fastidiosa Dixon]
gi|71729271|gb|EAO31389.1| phage-related protein [Xylella fastidiosa Ann-1]
gi|71731850|gb|EAO33908.1| phage-related protein [Xylella fastidiosa Ann-1]
Length = 92
Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats.
Identities = 32/86 (37%), Positives = 48/86 (55%)
Query: 10 TEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQM 69
E+ +E+ LV + +RK + GR G PDR+ + P G W+E+K P + + Q+
Sbjct: 6 RERTIERYLVAQVRAKGGEIRKVKWGGRHGAPDRIAMLPEGRTLWVELKAPGQQCTPHQV 65
Query: 70 SEIEELRRRGQRVKVLVSMEEVDNFL 95
E E +RR GQRV V+ S + VD L
Sbjct: 66 REHERMRRMGQRVVVVDSFKGVDEVL 91
>gi|71911261|ref|YP_282811.1| hypothetical protein M5005_Spy_1448 [Streptococcus pyogenes
MGAS5005]
gi|157311153|ref|YP_001469198.1| hypothetical protein P9_gp18 [Streptococcus phage P9]
gi|71854043|gb|AAZ52066.1| phage-related protein [Streptococcus pyogenes MGAS5005]
gi|119104302|gb|ABL61047.1| hypothetical protein [Streptococcus phage P9]
Length = 91
Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats.
Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 4/91 (4%)
Query: 9 QTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQ 68
+TEKD+E L K K + G G PDR+++ G +++EVK P + Q
Sbjct: 2 RTEKDIENYLKKKTK---GLCLKFTSPGTIGVPDRIVVMNTG-TFFVEVKAPGKKPRPSQ 57
Query: 69 MSEIEELRRRGQRVKVLVSMEEVDNFLEELA 99
++ ++++ GQ V V+ S E VD L+E+
Sbjct: 58 VAMHKKIKEAGQHVWVVDSYESVDMALKEME 88
>gi|281416461|ref|YP_003347381.1| hypothetical protein [Enterococcus phage phiFL4A]
gi|270209637|gb|ACZ64176.1| conserved hypothetical protein [Enterococcus phage phiFL4A]
Length = 106
Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats.
Identities = 28/92 (30%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 9 QTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQ 68
Q E D+EK L+ K+ K + G RG PDR+I+ G ++++E+K+P G+ Q
Sbjct: 2 QIENDIEKYLIRQIKRTGALCYKFTSPGTRGVPDRIILY-QGNVFFVELKRPGGKPRKDQ 60
Query: 69 MSEIEELRRRGQRVKVLVSMEEVDNFLEELAC 100
+ IE+ + + V V+ S + VD + +
Sbjct: 61 LKIIEKFKEQLIPVFVIDSKQGVDTLIYAMQS 92
>gi|94992971|ref|YP_601070.1| hypothetical protein MGAS2096_Spy1474 [Streptococcus pyogenes
MGAS2096]
gi|94546479|gb|ABF36526.1| phage-related protein [Streptococcus pyogenes MGAS2096]
Length = 97
Score = 111 bits (279), Expect = 2e-23, Method: Composition-based stats.
Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 4/91 (4%)
Query: 9 QTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQ 68
+TEKD+E L K K + G G PDR+++ G +++EVK P + Q
Sbjct: 8 RTEKDIENYLKKKTK---GLCLKFTSPGTIGVPDRIVVMNTG-TFFVEVKAPGKKPRPSQ 63
Query: 69 MSEIEELRRRGQRVKVLVSMEEVDNFLEELA 99
++ ++++ GQ V V+ S E VD L+E+
Sbjct: 64 VAMHKKIKEAGQHVWVVDSYESVDMALKEME 94
>gi|71897668|ref|ZP_00679913.1| phage-related protein [Xylella fastidiosa Ann-1]
gi|71898926|ref|ZP_00681093.1| phage-related protein [Xylella fastidiosa Ann-1]
gi|71731338|gb|EAO33402.1| phage-related protein [Xylella fastidiosa Ann-1]
gi|71732571|gb|EAO34624.1| phage-related protein [Xylella fastidiosa Ann-1]
Length = 92
Score = 111 bits (279), Expect = 3e-23, Method: Composition-based stats.
Identities = 31/86 (36%), Positives = 48/86 (55%)
Query: 10 TEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQM 69
E+ +E+ LV + +RK + GR G PDR+ + P G W+E+K P + + Q+
Sbjct: 6 RERTIERYLVAQVRAKGGEIRKVKWGGRHGAPDRIAMLPEGRTLWVELKAPGQQCTPHQV 65
Query: 70 SEIEELRRRGQRVKVLVSMEEVDNFL 95
E E +R GQRV V+ S++ VD L
Sbjct: 66 REHERMRGMGQRVVVVDSLKGVDEVL 91
>gi|315656931|ref|ZP_07909818.1| VRR-NUC domain protein [Mobiluncus curtisii subsp. holmesii ATCC
35242]
gi|315492886|gb|EFU82490.1| VRR-NUC domain protein [Mobiluncus curtisii subsp. holmesii ATCC
35242]
Length = 92
Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats.
Identities = 20/93 (21%), Positives = 41/93 (44%), Gaps = 1/93 (1%)
Query: 9 QTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQ 68
E+ +E++L + K G G PDR+ + N + ++E+K + Q
Sbjct: 1 MNERTIERQLKKAVEACGGLCWKLVCPGTSGVPDRICLM-NSRVVFVELKAAGKQPRPIQ 59
Query: 69 MSEIEELRRRGQRVKVLVSMEEVDNFLEELACT 101
+ +LR +G + V+ S++ + L+ L
Sbjct: 60 QRRMSQLRDQGFQTFVVDSVDGIREVLDALHAA 92
>gi|227875062|ref|ZP_03993207.1| phage associated protein [Mobiluncus mulieris ATCC 35243]
gi|304390305|ref|ZP_07372258.1| VRR-NUC domain protein [Mobiluncus curtisii subsp. curtisii ATCC
35241]
gi|306817349|ref|ZP_07451094.1| VRR-NUC domain protein [Mobiluncus mulieris ATCC 35239]
gi|227844340|gb|EEJ54504.1| phage associated protein [Mobiluncus mulieris ATCC 35243]
gi|304326061|gb|EFL93306.1| VRR-NUC domain protein [Mobiluncus curtisii subsp. curtisii ATCC
35241]
gi|304649790|gb|EFM47070.1| VRR-NUC domain protein [Mobiluncus mulieris ATCC 35239]
Length = 92
Score = 110 bits (277), Expect = 5e-23, Method: Composition-based stats.
Identities = 21/93 (22%), Positives = 43/93 (46%), Gaps = 1/93 (1%)
Query: 9 QTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQ 68
E+ +E +L + K G G PDR+ + N + ++E+K P + Q
Sbjct: 1 MNERTIEHQLKKAIEASGGLCWKLVCPGTTGVPDRICLMRN-RVVFVELKAPGKQPRPIQ 59
Query: 69 MSEIEELRRRGQRVKVLVSMEEVDNFLEELACT 101
+ + +LR++G V+ S++ + L+ L+
Sbjct: 60 VRRMNQLRQQGFTALVVDSIDGIQEVLDALSAA 92
>gi|21910977|ref|NP_665245.1| hypothetical protein SpyM3_1441 [Streptococcus pyogenes MGAS315]
gi|28876471|ref|NP_795677.1| hypothetical protein SpyM3_1441 [Streptococcus pyogenes phage
315.6]
gi|28895336|ref|NP_801686.1| hypothetical protein SPs0424 [Streptococcus pyogenes SSI-1]
gi|139473886|ref|YP_001128602.1| hypothetical protein SpyM51053 [Streptococcus pyogenes str.
Manfredo]
gi|21905185|gb|AAM80048.1| conserved hypothetical protein - phage-associated [Streptococcus
pyogenes MGAS315]
gi|28810582|dbj|BAC63519.1| hypothetical protein [Streptococcus pyogenes SSI-1]
gi|134272133|emb|CAM30378.1| hypothetical phage protein [Streptococcus pyogenes str. Manfredo]
Length = 91
Score = 110 bits (277), Expect = 5e-23, Method: Composition-based stats.
Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 4/91 (4%)
Query: 9 QTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQ 68
+TEKD+E L K K + G G PDR+++ G +++EVK P + Q
Sbjct: 2 RTEKDIENYLKKKTK---GLCLKFASPGTIGVPDRIVVMNTG-TFFVEVKAPGKKPRPSQ 57
Query: 69 MSEIEELRRRGQRVKVLVSMEEVDNFLEELA 99
++ +++++ GQ V V+ S E VD L+E+
Sbjct: 58 VAMHKKIKKAGQHVWVVDSYESVDIALKEME 88
>gi|306826831|ref|ZP_07460131.1| VRR-NUC domain protein [Streptococcus pyogenes ATCC 10782]
gi|304430849|gb|EFM33858.1| VRR-NUC domain protein [Streptococcus pyogenes ATCC 10782]
Length = 91
Score = 110 bits (277), Expect = 5e-23, Method: Composition-based stats.
Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 4/91 (4%)
Query: 9 QTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQ 68
+TEKD+E L K K + G G PDR+++ G ++++EVK P + Q
Sbjct: 2 RTEKDIENYLKKKTK---GLCLKFTSPGTIGVPDRIVVMNTG-IFFVEVKAPDKKPRPSQ 57
Query: 69 MSEIEELRRRGQRVKVLVSMEEVDNFLEELA 99
++ ++++ GQ V V+ S E VD L+E+
Sbjct: 58 VAMHKKIKEAGQHVWVVDSYESVDIALKEME 88
>gi|209559300|ref|YP_002285772.1| hypothetical protein Spy49_0764 [Streptococcus phage NZ131.2]
gi|209540501|gb|ACI61077.1| hypothetical protein Spy49_0764 [Streptococcus phage NZ131.2]
Length = 97
Score = 110 bits (277), Expect = 5e-23, Method: Composition-based stats.
Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 4/91 (4%)
Query: 9 QTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQ 68
+TEKD+E L K K + G G PDR+++ G +++EVK P + Q
Sbjct: 8 RTEKDIENYLKKKTK---GLCLKFASPGTIGVPDRIVVMNTG-TFFVEVKAPGKKPRPSQ 63
Query: 69 MSEIEELRRRGQRVKVLVSMEEVDNFLEELA 99
++ +++++ GQ V V+ S E VD L+E+
Sbjct: 64 VAMHKKIKKAGQHVWVVDSYESVDIALKEME 94
>gi|225871339|ref|YP_002747286.1| phage protein [Streptococcus equi subsp. equi 4047]
gi|225700743|emb|CAW95384.1| hypothetical phage protein [Streptococcus equi subsp. equi 4047]
Length = 91
Score = 110 bits (276), Expect = 6e-23, Method: Composition-based stats.
Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 4/91 (4%)
Query: 9 QTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQ 68
+TEKD+E L K K + G G PDR+++ G +++EVK P + Q
Sbjct: 2 RTEKDIENYLKKKTK---GLCLKFASPGTIGVPDRIVVMNTG-TFFVEVKAPGKKPRPSQ 57
Query: 69 MSEIEELRRRGQRVKVLVSMEEVDNFLEELA 99
++ ++++ GQ V V+ S E VD L+E+
Sbjct: 58 VAMHKKIKEAGQHVWVVDSYESVDIALKEME 88
>gi|260579062|ref|ZP_05846961.1| conserved hypothetical protein [Corynebacterium jeikeium ATCC
43734]
gi|258602813|gb|EEW16091.1| conserved hypothetical protein [Corynebacterium jeikeium ATCC
43734]
Length = 92
Score = 110 bits (276), Expect = 6e-23, Method: Composition-based stats.
Identities = 24/93 (25%), Positives = 38/93 (40%), Gaps = 1/93 (1%)
Query: 9 QTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQ 68
E +E+ L K + K + G G PDR+ I G + ++E+K P Q
Sbjct: 1 MNEHAIEQHLKQAVKAIGGLCWKFTSPGTAGVPDRICIH-RGRVIFVELKAPGRLPRPIQ 59
Query: 69 MSEIEELRRRGQRVKVLVSMEEVDNFLEELACT 101
I++L G V V+ S+E + L
Sbjct: 60 RRRIQQLTDHGMDVVVVDSVEGTKEVADALRAA 92
>gi|50913382|ref|YP_059354.1| hypothetical protein M6_Spy0036 [Streptococcus pyogenes
MGAS10394]
gi|50902456|gb|AAT86171.1| Phage-related protein [Streptococcus pyogenes MGAS10394]
Length = 97
Score = 110 bits (275), Expect = 7e-23, Method: Composition-based stats.
Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 4/91 (4%)
Query: 9 QTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQ 68
+TEKD+E L K K + G G PDR+++ G +++EVK P + Q
Sbjct: 8 RTEKDIENYLKKKTK---GLCLKFASPGTIGVPDRIVVMNTG-TFFVEVKAPGKKPRPSQ 63
Query: 69 MSEIEELRRRGQRVKVLVSMEEVDNFLEELA 99
++ +++++ GQ V V+ S E VD L+E+
Sbjct: 64 VAMHKKIKKAGQHVWVVDSYESVDIALKEME 94
>gi|71898990|ref|ZP_00681156.1| phage-related protein [Xylella fastidiosa Ann-1]
gi|71901325|ref|ZP_00683421.1| phage-related protein [Xylella fastidiosa Ann-1]
gi|71728909|gb|EAO31044.1| phage-related protein [Xylella fastidiosa Ann-1]
gi|71731236|gb|EAO33301.1| phage-related protein [Xylella fastidiosa Ann-1]
Length = 92
Score = 110 bits (275), Expect = 8e-23, Method: Composition-based stats.
Identities = 31/86 (36%), Positives = 48/86 (55%)
Query: 10 TEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQM 69
E+ +E+ LV + +RK + GR G PDR+ + P G W+E+K P + + Q+
Sbjct: 6 RERIIERYLVAQVRAKGGEIRKVKWGGRHGAPDRIAMLPEGRTLWVELKAPGQQCTPHQV 65
Query: 70 SEIEELRRRGQRVKVLVSMEEVDNFL 95
E E +R GQRV V+ S++ VD L
Sbjct: 66 REHERMRGMGQRVVVVDSLKGVDEVL 91
>gi|170729636|ref|YP_001775069.1| hypothetical protein Xfasm12_0425 [Xylella fastidiosa M12]
gi|170730323|ref|YP_001775756.1| hypothetical protein Xfasm12_1175 [Xylella fastidiosa M12]
gi|170730596|ref|YP_001776029.1| hypothetical protein Xfasm12_1483 [Xylella fastidiosa M12]
gi|167964429|gb|ACA11439.1| conserved hypothetical protein [Xylella fastidiosa M12]
gi|167965116|gb|ACA12126.1| conserved hypothetical protein [Xylella fastidiosa M12]
gi|167965389|gb|ACA12399.1| conserved hypothetical protein [Xylella fastidiosa M12]
Length = 92
Score = 109 bits (274), Expect = 1e-22, Method: Composition-based stats.
Identities = 32/90 (35%), Positives = 50/90 (55%)
Query: 6 FHYQTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLS 65
+ E+ +E+ LV + +RK + GR G PDR+ + P G W+E+K P + +
Sbjct: 2 MNIPRERTIERYLVAQVRAKGGEIRKVKWGGRHGAPDRIAMLPEGRTLWVELKAPGQQCT 61
Query: 66 HQQMSEIEELRRRGQRVKVLVSMEEVDNFL 95
Q+ E E +RR GQRV V+ S++ VD L
Sbjct: 62 LHQVREHERMRRMGQRVVVVDSLKGVDEVL 91
>gi|300933479|ref|ZP_07148735.1| hypothetical protein CresD4_05372 [Corynebacterium resistens DSM
45100]
Length = 92
Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 23/93 (24%), Positives = 38/93 (40%), Gaps = 1/93 (1%)
Query: 9 QTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQ 68
E +E+ L + + K + G G PDR+ I G + ++E+K P Q
Sbjct: 1 MNEHAIEQHLKQAVEAIGGICWKFTSPGTAGVPDRICIH-RGRVIFVELKAPGRLPRPIQ 59
Query: 69 MSEIEELRRRGQRVKVLVSMEEVDNFLEELACT 101
I++L G V V+ S+E + L
Sbjct: 60 RRRIQQLTDHGMDVVVVDSVEGTKEVADALRAA 92
>gi|153814244|ref|ZP_01966912.1| hypothetical protein RUMTOR_00453 [Ruminococcus torques ATCC 27756]
gi|145848640|gb|EDK25558.1| hypothetical protein RUMTOR_00453 [Ruminococcus torques ATCC 27756]
Length = 74
Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 20/74 (27%), Positives = 37/74 (50%)
Query: 28 WVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLVS 87
K G PDR+++ P+G + ++E+K P + Q+ L R G V V+ +
Sbjct: 1 MALKFVSHSMNGVPDRIVLMPDGKMAFVELKAPGKKPRPLQLKRKRMLERLGFPVYVVDN 60
Query: 88 MEEVDNFLEELACT 101
+E++ L+E+ T
Sbjct: 61 IEQIGGILDEIQST 74
>gi|313813467|gb|EFS51181.1| VRR-NUC domain protein [Propionibacterium acnes HL025PA1]
gi|315106938|gb|EFT78914.1| VRR-NUC domain protein [Propionibacterium acnes HL030PA1]
Length = 92
Score = 107 bits (269), Expect = 4e-22, Method: Composition-based stats.
Identities = 22/93 (23%), Positives = 37/93 (39%), Gaps = 1/93 (1%)
Query: 9 QTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQ 68
E +E +L + K G G PDRL + G + ++EVK P + Q
Sbjct: 1 MNEHHIEAQLKKAVEASGGLCWKLVCPGTTGVPDRLCLM-GGQVVFVEVKAPGKKPRPIQ 59
Query: 69 MSEIEELRRRGQRVKVLVSMEEVDNFLEELACT 101
+ +L G V+ S++ + L+ L
Sbjct: 60 RRRMSQLAAHGFTALVVDSVDGIKEVLDALPAA 92
>gi|254781194|ref|YP_003065607.1| hypothetical protein CLIBASIA_05505 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040871|gb|ACT57667.1| hypothetical protein CLIBASIA_05505 [Candidatus Liberibacter
asiaticus str. psy62]
gi|317120756|gb|ADV02577.1| endonuclease [Candidatus Liberibacter asiaticus]
Length = 98
Score = 107 bits (268), Expect = 5e-22, Method: Composition-based stats.
Identities = 52/93 (55%), Positives = 63/93 (67%)
Query: 8 YQTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQ 67
Y +E +EKRLV G+KKLDC V K F+ +RGCPDRLIITPNG +W+E+K GRLS+
Sbjct: 5 YLSEAKLEKRLVKGSKKLDCLVFKTQFINQRGCPDRLIITPNGAHFWVEMKTSRGRLSNA 64
Query: 68 QMSEIEELRRRGQRVKVLVSMEEVDNFLEELAC 100
Q I L Q+V+VL S EEVD FL L C
Sbjct: 65 QKRVIATLLLYHQKVQVLSSTEEVDGFLRMLEC 97
>gi|50843065|ref|YP_056292.1| hypothetical protein PPA1595 [Propionibacterium acnes KPA171202]
gi|50840667|gb|AAT83334.1| phage-related protein [Propionibacterium acnes KPA171202]
Length = 92
Score = 107 bits (268), Expect = 5e-22, Method: Composition-based stats.
Identities = 22/93 (23%), Positives = 37/93 (39%), Gaps = 1/93 (1%)
Query: 9 QTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQ 68
E +E +L + K G G PDRL + G + ++EVK P + Q
Sbjct: 1 MNEHHIEAQLKKAVEASGGLCWKLVCPGTTGVPDRLCLM-GGQVVFVEVKAPGKKPRPIQ 59
Query: 69 MSEIEELRRRGQRVKVLVSMEEVDNFLEELACT 101
+ +L G V+ S++ + L+ L
Sbjct: 60 RRRMSQLAAHGFTALVVDSVDGIKKVLDALPAA 92
>gi|227872573|ref|ZP_03990909.1| VRR-NUC domain protein [Oribacterium sinus F0268]
gi|227841574|gb|EEJ51868.1| VRR-NUC domain protein [Oribacterium sinus F0268]
Length = 103
Score = 106 bits (266), Expect = 8e-22, Method: Composition-based stats.
Identities = 35/91 (38%), Positives = 49/91 (53%)
Query: 9 QTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQ 68
+ EK VEK +V L C K RG PDRL IT G +++ E+K GRLS Q
Sbjct: 3 EQEKKVEKAMVRMLWNLGCESYKFVSPNCRGVPDRLFITEEGKVFFAELKTIKGRLSSLQ 62
Query: 69 MSEIEELRRRGQRVKVLVSMEEVDNFLEELA 99
++I++L+ Q V V+ ME V F+E+
Sbjct: 63 ENQIKKLKALKQEVYVIYGMEGVRKFVEDFQ 93
>gi|300933381|ref|ZP_07148637.1| hypothetical protein CresD4_04880 [Corynebacterium resistens DSM
45100]
Length = 92
Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats.
Identities = 21/93 (22%), Positives = 36/93 (38%), Gaps = 1/93 (1%)
Query: 9 QTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQ 68
E+ +E+ L + + K + G G PDR+ I G + ++E+K P Q
Sbjct: 1 MNEQAIEQHLKKAVEAIGGLCWKFTSPGTAGVPDRICIH-RGRVIFVELKAPGRLPRPIQ 59
Query: 69 MSEIEELRRRGQRVKVLVSMEEVDNFLEELACT 101
I +L G V+ S+ + L
Sbjct: 60 RRRIHQLTDHGVDAVVVDSLTGAQGVADALRAA 92
>gi|318064434|gb|ADV36448.1| gp36 [Edwardsiella phage eiAU]
gi|318064542|gb|ADV36500.1| gp36 [Edwardsiella phage eiDWF]
gi|318064646|gb|ADV36552.1| gp36 [Edwardsiella phage eiMSLS]
Length = 92
Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats.
Identities = 37/86 (43%), Positives = 48/86 (55%)
Query: 10 TEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQM 69
E V+ L K + VRK S+ GRRGCPD I+ P G + +EVKKP G Q+
Sbjct: 3 PEGKVQAHLQRRFKAIGGLVRKISYEGRRGCPDLFIVLPGGVVVMVEVKKPGGTPEPHQV 62
Query: 70 SEIEELRRRGQRVKVLVSMEEVDNFL 95
EIE LR+RG V V+ S+E D +
Sbjct: 63 REIERLRQRGVPVYVIDSIEGADKLV 88
>gi|304389861|ref|ZP_07371820.1| VRR-NUC domain protein [Mobiluncus curtisii subsp. curtisii ATCC
35241]
gi|304327037|gb|EFL94276.1| VRR-NUC domain protein [Mobiluncus curtisii subsp. curtisii ATCC
35241]
Length = 92
Score = 104 bits (261), Expect = 3e-21, Method: Composition-based stats.
Identities = 21/93 (22%), Positives = 42/93 (45%), Gaps = 1/93 (1%)
Query: 9 QTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQ 68
E+ +E +L + + K G G PDR+ + N ++E+K P Q
Sbjct: 1 MNERTIEAKLKKAVEDIGGLCWKLVCPGTIGVPDRICLMRN-RAVFVELKVPGQNPRPIQ 59
Query: 69 MSEIEELRRRGQRVKVLVSMEEVDNFLEELACT 101
+ + +LR +G V+ S++++ L+ L+
Sbjct: 60 LRRMNQLRYQGFTALVVDSVDDIQEVLDALSAA 92
>gi|217965846|ref|YP_002351524.1| VRR_NUC domain protein [Listeria monocytogenes HCC23]
gi|217335116|gb|ACK40910.1| VRR_NUC domain protein [Listeria monocytogenes HCC23]
gi|307569606|emb|CAR82785.1| phage protein, putative [Listeria monocytogenes L99]
Length = 92
Score = 102 bits (256), Expect = 1e-20, Method: Composition-based stats.
Identities = 23/92 (25%), Positives = 38/92 (41%), Gaps = 1/92 (1%)
Query: 9 QTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQ 68
E VEK L K K + G RG PDR+++ + + ++E K P L Q
Sbjct: 1 MLESKVEKYLREQVNKRGGLCWKFTSPGTRGVPDRIVML-DRRIVFVETKAPKKELRKLQ 59
Query: 69 MSEIEELRRRGQRVKVLVSMEEVDNFLEELAC 100
++ +G + + E+VDN +
Sbjct: 60 EKRKAQIEAQGLLHYAVDTKEQVDNLMSHFGA 91
>gi|282533170|gb|ADA82279.1| hypothetical protein [Escherichia phage K1G]
gi|282534221|gb|ADA82329.1| hypothetical protein [Escherichia phage K1H]
Length = 99
Score = 102 bits (256), Expect = 1e-20, Method: Composition-based stats.
Identities = 33/87 (37%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Query: 10 TEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKK-PTGRLSHQQ 68
E V+K + L VRK S+ GR G PD L+I P G +W++EVKK + Q
Sbjct: 8 KEGRVQKYAKDRFEALGGLVRKLSYEGRSGAPDLLVILPGGIVWFVEVKKDENTKPDPHQ 67
Query: 69 MSEIEELRRRGQRVKVLVSMEEVDNFL 95
+ E E +R+RG V V+ S ++VD+ +
Sbjct: 68 LREHERMRKRGANVFVVGSFKQVDDLI 94
>gi|328913306|gb|AEB64902.1| hypothetical protein LL3_03372 [Bacillus amyloliquefaciens LL3]
Length = 83
Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 30 RKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLVSME 89
K G G PDR+++ P G L ++E+K P + Q+ ++L G V+VL S++
Sbjct: 1 MKFISPGLSGVPDRIVLLPGGKLVFVEMKAPGEKPRPLQLKRKKDLETMGFEVRVLDSID 60
Query: 90 EVDNFL----EELACT 101
+ F+ E+ T
Sbjct: 61 SITAFVRGAFREIQTT 76
>gi|213692068|ref|YP_002322654.1| hypothetical protein Blon_1186 [Bifidobacterium longum subsp.
infantis ATCC 15697]
gi|213523529|gb|ACJ52276.1| conserved hypothetical protein [Bifidobacterium longum subsp.
infantis ATCC 15697]
gi|320458180|dbj|BAJ68801.1| conserved hypothetical protein [Bifidobacterium longum subsp.
infantis ATCC 15697]
Length = 96
Score = 100 bits (251), Expect = 5e-20, Method: Composition-based stats.
Identities = 26/86 (30%), Positives = 41/86 (47%)
Query: 10 TEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQM 69
E VE+R A++ K GR G PDRL+ P G L+ +E+K+P G+ Q
Sbjct: 5 RENTVERRFNMLARRHGGLSLKWVSPGRLGVPDRLLFMPGGRLYLVELKRPGGKPRASQN 64
Query: 70 SEIEELRRRGQRVKVLVSMEEVDNFL 95
+ +L RG V V+ + + +
Sbjct: 65 AMFAKLETRGFHVWVVDDPDAFFDMI 90
>gi|62327353|ref|YP_224066.1| hypothetical protein BPKS7gp44 [Salmonella phage SS3e]
gi|57472387|gb|AAW51249.1| hypothetical protein [Salmonella phage SS3e]
Length = 95
Score = 99.8 bits (248), Expect = 1e-19, Method: Composition-based stats.
Identities = 33/89 (37%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
Query: 10 TEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKK-PTGRLSHQQ 68
E V+K + L VRK S+ R G PD L+I P G +W++EVKK + Q
Sbjct: 4 PEGRVQKYAKERFEALGGLVRKLSYENRVGAPDLLVILPGGIIWFVEVKKDENTKPDPHQ 63
Query: 69 MSEIEELRRRGQRVKVLVSMEEVDNFLEE 97
+ E E +R+RG V V+ S ++VD +E
Sbjct: 64 LREHERMRKRGANVFVVGSKKQVDKLIEH 92
>gi|134288569|ref|YP_001110808.1| hypothetical protein SPSV3_gp08 [Salmonella phage SETP3]
gi|125631934|gb|ABN47337.1| hypothetical protein [Salmonella phage SETP3]
Length = 95
Score = 99.4 bits (247), Expect = 1e-19, Method: Composition-based stats.
Identities = 34/89 (38%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
Query: 10 TEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKK-PTGRLSHQQ 68
E V+K + L VRK S+ GR G PD L+I P G +W++EVKK + Q
Sbjct: 4 KEGRVQKYAKERFEALGGLVRKLSYEGRSGAPDLLVILPRGVIWFVEVKKDENTKPDPHQ 63
Query: 69 MSEIEELRRRGQRVKVLVSMEEVDNFLEE 97
+ E E R+RG V V+ S ++VD +E
Sbjct: 64 LREHERFRKRGANVFVVGSFKQVDKLIEH 92
>gi|262200538|ref|YP_003271746.1| VRR-NUC domain-containing protein [Gordonia bronchialis DSM 43247]
gi|262083885|gb|ACY19853.1| VRR-NUC domain protein [Gordonia bronchialis DSM 43247]
Length = 131
Score = 94.4 bits (234), Expect = 4e-18, Method: Composition-based stats.
Identities = 23/93 (24%), Positives = 39/93 (41%), Gaps = 6/93 (6%)
Query: 10 TEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITP-----NGGLWWIEVKKPTGRL 64
E +E+ LV ++ K + G G PDR ++ + ++EVK+P
Sbjct: 9 RESAIERHLVQRCAEIGVLCLKFTSPGHVGVPDR-VLMGHDANDDSVTLFVEVKRPDEAP 67
Query: 65 SHQQMSEIEELRRRGQRVKVLVSMEEVDNFLEE 97
Q++ I +R GQ V S VD + +
Sbjct: 68 RPSQVAMIRRMRDHGQHAVVADSKASVDALISD 100
>gi|322691246|ref|YP_004220816.1| hypothetical protein BLLJ_1057 [Bifidobacterium longum subsp.
longum JCM 1217]
gi|320456102|dbj|BAJ66724.1| conserved hypothetical protein [Bifidobacterium longum subsp.
longum JCM 1217]
Length = 88
Score = 94.4 bits (234), Expect = 4e-18, Method: Composition-based stats.
Identities = 24/81 (29%), Positives = 39/81 (48%)
Query: 15 EKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEE 74
E+R A++ K GR G PDRL+ P G L+ +E+K+P G+ Q + +
Sbjct: 2 ERRFNMLARRHGGLSLKWVSPGRLGVPDRLLFMPGGRLYLVELKRPGGKPRASQSAMFAK 61
Query: 75 LRRRGQRVKVLVSMEEVDNFL 95
L RG V V+ + + +
Sbjct: 62 LETRGFHVWVVDDPDAFFDMI 82
>gi|288799808|ref|ZP_06405267.1| putative protein p44 [Prevotella sp. oral taxon 299 str. F0039]
gi|288333056|gb|EFC71535.1| putative protein p44 [Prevotella sp. oral taxon 299 str. F0039]
Length = 100
Score = 94.0 bits (233), Expect = 6e-18, Method: Composition-based stats.
Identities = 27/89 (30%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
Query: 10 TEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQM 69
+EK +E+ L K++ K G PDRLII NG + E+K GRL+ +Q
Sbjct: 8 SEKVLERNLQKRVKEIGGKAYKFISSNCTGVPDRLIIF-NGRFCFAEIKSYNGRLAPRQE 66
Query: 70 SEIEELRRRGQRVKVLVSMEEVDNFLEEL 98
EI +L+ G +V ++ + E++++ ++ +
Sbjct: 67 IEIRKLKNLGAKVFIVYTPEDIESIIKYI 95
>gi|255994013|ref|ZP_05427148.1| putative protein p44 [Eubacterium saphenum ATCC 49989]
gi|255993681|gb|EEU03770.1| putative protein p44 [Eubacterium saphenum ATCC 49989]
Length = 145
Score = 93.2 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 31/96 (32%), Positives = 52/96 (54%), Gaps = 8/96 (8%)
Query: 10 TEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQM 69
TEKD+E+RL+ K K G PDR+++ G ++++EVK+P G LS +Q+
Sbjct: 6 TEKDIERRLIRKVKSYGDKTYKFISPTAAGVPDRIVLLA-GHVFFVEVKRPDGELSLRQV 64
Query: 70 SEIEELR-------RRGQRVKVLVSMEEVDNFLEEL 98
+ EL+ + R VL + +EVD ++E +
Sbjct: 65 LRLIELKGTVPHKSKLIPRCAVLSTADEVDVWVEYI 100
>gi|226949729|ref|YP_002804820.1| VRR-NUC domain protein [Clostridium botulinum A2 str. Kyoto]
gi|226843509|gb|ACO86175.1| VRR-NUC domain protein [Clostridium botulinum A2 str. Kyoto]
Length = 62
Score = 90.6 bits (224), Expect = 6e-17, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 40/59 (67%)
Query: 40 CPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLVSMEEVDNFLEEL 98
PDR+++ P G + ++E+K P + Q I+ELR G RV+++ S+E+++NF+EE+
Sbjct: 1 MPDRIVLLPQGRIVFVELKAPDKKPRPIQKYRIKELRALGFRVEIIDSIEDINNFVEEI 59
>gi|290466809|gb|ADD25739.1| hypothetical protein [Lactococcus phage 1358]
Length = 113
Score = 89.8 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 3/91 (3%)
Query: 10 TEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQM 69
E +VEK L + K + G G PDR++I N + ++E+K+P Q+
Sbjct: 19 RESEVEKYLKDRCVAVGGRAMKWT--GGNGVPDRIVIV-NDCVVFVELKRPYATPRADQL 75
Query: 70 SEIEELRRRGQRVKVLVSMEEVDNFLEELAC 100
++ ++RR G V V+ E+VD L++L
Sbjct: 76 AQHAKIRRAGGTVYVVDRFEQVDELLDKLTA 106
>gi|297587095|ref|ZP_06945740.1| VRR-NUC domain protein [Finegoldia magna ATCC 53516]
gi|297575076|gb|EFH93795.1| VRR-NUC domain protein [Finegoldia magna ATCC 53516]
Length = 65
Score = 89.4 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 33/64 (51%)
Query: 37 RRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLVSMEEVDNFLE 96
G PDR+I+ P G + ++E K+P G Q I + + G +V VL S E +D ++
Sbjct: 1 MTGIPDRIILLPKGKVGFVETKRPGGEPRPIQKKRIRQFKNLGFKVYVLDSKENIDEIIK 60
Query: 97 ELAC 100
+
Sbjct: 61 RIGG 64
>gi|21283135|ref|NP_646223.1| hypothetical protein MW1406 [Staphylococcus aureus subsp. aureus
MW2]
gi|21204575|dbj|BAB95271.1| hypothetical protein [Staphylococcus aureus subsp. aureus MW2]
Length = 65
Score = 88.6 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 34/63 (53%)
Query: 40 CPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLVSMEEVDNFLEELA 99
PDR+II P G +++E+K+ G+L Q + R +V VL + E+V+ F+ +
Sbjct: 1 MPDRIIIMPEGKTYFVEMKQEKGKLHPLQKYVHRQFENRDHKVYVLWNKEQVNTFIRMVG 60
Query: 100 CTL 102
T
Sbjct: 61 GTF 63
>gi|295319701|gb|ADG00079.1| VRR-NUC domain protein [Clostridium botulinum F str. 230613]
Length = 62
Score = 87.1 bits (215), Expect = 7e-16, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 38/59 (64%)
Query: 40 CPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLVSMEEVDNFLEEL 98
PDR+++ P G + ++E+K P + Q I+ELR G RV+++ S+E ++NF+E +
Sbjct: 1 MPDRIVLLPEGRIIFVELKAPGKKPRPIQKYRIKELRSLGFRVEIIDSIERINNFVEGI 59
>gi|160898848|ref|YP_001564430.1| VRR-NUC domain-containing protein [Delftia acidovorans SPH-1]
gi|160364432|gb|ABX36045.1| VRR-NUC domain protein [Delftia acidovorans SPH-1]
Length = 94
Score = 80.2 bits (197), Expect = 9e-14, Method: Composition-based stats.
Identities = 22/89 (24%), Positives = 32/89 (35%), Gaps = 9/89 (10%)
Query: 10 TEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITP---------NGGLWWIEVKKP 60
E +E+ K + K GR G PD +++ P ++E KKP
Sbjct: 5 RESAIERADRKNHKAAGRLLLKFVSPGRNGMPDDILLNPIPPEHQELVARYFRFVEYKKP 64
Query: 61 TGRLSHQQMSEIEELRRRGQRVKVLVSME 89
Q+ ELR G V V+ S
Sbjct: 65 KATPRADQLRRHAELRALGFTVDVIDSQS 93
>gi|85059144|ref|YP_454846.1| hypothetical protein SG1166 [Sodalis glossinidius str.
'morsitans']
gi|84779664|dbj|BAE74441.1| hypothetical phage protein [Sodalis glossinidius str.
'morsitans']
Length = 102
Score = 77.5 bits (190), Expect = 6e-13, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 27/56 (48%)
Query: 37 RRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLVSMEEVD 92
+ G PDRL++ P G + ++E K P + Q E + LR G V VL V
Sbjct: 38 QAGVPDRLVVLPGGRVLFVECKAPGQKARPSQRREHDRLRALGGEVIVLDDRTVVG 93
>gi|85059136|ref|YP_454838.1| hypothetical protein SG1158 [Sodalis glossinidius str.
'morsitans']
gi|84779656|dbj|BAE74433.1| hypothetical phage protein [Sodalis glossinidius str.
'morsitans']
Length = 95
Score = 76.7 bits (188), Expect = 9e-13, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 26/51 (50%)
Query: 37 RRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLVS 87
+ G PDRL++ P G + ++E K P + Q E + LR G V VL
Sbjct: 38 QAGVPDRLVVLPGGRVLFVECKAPGQKARPSQRREHDRLRALGGEVIVLDD 88
>gi|331007740|ref|ZP_08330866.1| hypothetical protein IMCC1989_1941 [gamma proteobacterium
IMCC1989]
gi|330418448|gb|EGG92988.1| hypothetical protein IMCC1989_1941 [gamma proteobacterium
IMCC1989]
Length = 88
Score = 76.3 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 23/81 (28%), Positives = 35/81 (43%), Gaps = 1/81 (1%)
Query: 9 QTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQ 68
E +EK++ AK+ K S RG PDRL + +E K + S Q
Sbjct: 1 MRESVIEKKVTEYAKEQGWLSYKWSSPNSRGVPDRLYF-KRCLVVVVEFKATNKKPSKLQ 59
Query: 69 MSEIEELRRRGQRVKVLVSME 89
++L +G V V+ S+E
Sbjct: 60 KEIHKKLNEQGFLVHVIDSIE 80
>gi|329767791|ref|ZP_08259307.1| hypothetical protein HMPREF0428_01004 [Gemella haemolysans M341]
gi|328838892|gb|EGF88486.1| hypothetical protein HMPREF0428_01004 [Gemella haemolysans M341]
Length = 97
Score = 72.8 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 5/94 (5%)
Query: 9 QTEKDVEKRLVTGAKKLDCWVRKAS--FVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSH 66
+EK E ++ K+ C+ K + + G +G PD L+I NG IEVK+ TG+ S
Sbjct: 2 MSEKAFENKIKKFLKEKGCYFLKYNPEYFGIKGTPD-LLICCNGYFLGIEVKRETGKPSK 60
Query: 67 QQMSEIEELRRRGQRVKVLV--SMEEVDNFLEEL 98
Q+ +IEE++ G VL E+ +EEL
Sbjct: 61 LQLKKIEEIKNAGGIAMVLYPSGFEKFKKLIEEL 94
>gi|189465858|ref|ZP_03014643.1| hypothetical protein BACINT_02220 [Bacteroides intestinalis DSM
17393]
gi|189434122|gb|EDV03107.1| hypothetical protein BACINT_02220 [Bacteroides intestinalis DSM
17393]
Length = 80
Score = 70.9 bits (173), Expect = 5e-11, Method: Composition-based stats.
Identities = 18/76 (23%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Query: 9 QTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQ 68
+ E ++ R++ + +V K + G PD L+ +G +++EVK+P + Q
Sbjct: 3 ELESKIQARIIKRLEAQGYYVVKLILTNKNGIPDLLV-LKDGKAFFVEVKRPGEKPRPLQ 61
Query: 69 MSEIEELRRRGQRVKV 84
+ EL+ G +V
Sbjct: 62 EYRMNELKELGFICEV 77
>gi|91214214|ref|NP_919001.2| conserved phage protein [Burkholderia phage BcepNazgul]
gi|88604907|gb|AAQ63368.2| conserved phage protein [Burkholderia phage BcepNazgul]
Length = 108
Score = 69.0 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Query: 10 TEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQM 69
E +E + AK +V K G+RG PDR+ I +G + +IE K+ Q
Sbjct: 19 RETRIEDQTNDWAKANGWFVAKFVSPGQRGVPDRMYIR-SGIVVFIEFKRKDAEPKRHQY 77
Query: 70 SEIEELRRRGQRVKVLVSMEEV 91
++ +E+RR G V + E+
Sbjct: 78 NKHDEMRRHGAYVHWADNHEDA 99
>gi|152990201|ref|YP_001355923.1| hypothetical protein NIS_0452 [Nitratiruptor sp. SB155-2]
gi|151422062|dbj|BAF69566.1| phage-related protein [Nitratiruptor sp. SB155-2]
Length = 91
Score = 68.2 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 24/89 (26%), Positives = 43/89 (48%), Gaps = 1/89 (1%)
Query: 9 QTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQ 68
E ++K+++ KK C+ K G PD ++ NG IEVK + + Q
Sbjct: 1 MKESLIQKKILDFLKKRGCYAVKVIAANESGTPD-ILACCNGKFVGIEVKAGRNKPTKLQ 59
Query: 69 MSEIEELRRRGQRVKVLVSMEEVDNFLEE 97
M ++E+++ V S+E+V+ LE+
Sbjct: 60 MHKLEKIKEAAGISMVAYSVEDVEKMLED 88
>gi|297565626|ref|YP_003684598.1| VRR-NUC domain-containing protein [Meiothermus silvanus DSM 9946]
gi|296850075|gb|ADH63090.1| VRR-NUC domain protein [Meiothermus silvanus DSM 9946]
Length = 111
Score = 63.6 bits (154), Expect = 8e-09, Method: Composition-based stats.
Identities = 23/95 (24%), Positives = 42/95 (44%), Gaps = 9/95 (9%)
Query: 9 QTEKDVEKRLVTGAKKLDCWVRKA--------SFVGRRGCPDRLIITPNGGLWWIEVKKP 60
+E ++++ +V + V + + +G PD L G W+EVK+P
Sbjct: 18 MSEAEIQQGIVRYLRATGWVVLEIKGNAKRGGTVFQTKGIPD-LYAARKGRSLWLEVKRP 76
Query: 61 TGRLSHQQMSEIEELRRRGQRVKVLVSMEEVDNFL 95
R +Q + E LR+ G V V+ +E ++ L
Sbjct: 77 GQRPRPEQEALHERLRQEGCEVHVIDGIEALEKLL 111
>gi|307317156|ref|ZP_07596597.1| VRR-NUC domain protein [Sinorhizobium meliloti AK83]
gi|306897244|gb|EFN27989.1| VRR-NUC domain protein [Sinorhizobium meliloti AK83]
Length = 95
Score = 62.0 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 32/85 (37%), Positives = 40/85 (47%), Gaps = 1/85 (1%)
Query: 12 KDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSE 71
DV++ LV K VRK + GRRG PD L G IE KK QQ E
Sbjct: 5 SDVQRPLVEYGKSEGWLVRKVVYQGRRGSPD-LWFLKGGTWVLIEAKKFGDEARIQQKRE 63
Query: 72 IEELRRRGQRVKVLVSMEEVDNFLE 96
E LRR+G V V+ ++ E L+
Sbjct: 64 HERLRRKGANVYVVDTLAEGKRILD 88
>gi|266623804|ref|ZP_06116739.1| hypothetical protein CLOSTHATH_05124 [Clostridium hathewayi DSM
13479]
gi|288864376|gb|EFC96674.1| hypothetical protein CLOSTHATH_05124 [Clostridium hathewayi DSM
13479]
Length = 123
Score = 60.9 bits (147), Expect = 6e-08, Method: Composition-based stats.
Identities = 16/87 (18%), Positives = 40/87 (45%), Gaps = 8/87 (9%)
Query: 13 DVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQM--- 69
D+E+++ + + S G P ++I P G + ++E+ G+ + Q+
Sbjct: 5 DLEQKIKDAVDARGGRMHEISVGNTPGFPGYMVILPGGHVGFVEI----GKPNRNQLIAL 60
Query: 70 -SEIEELRRRGQRVKVLVSMEEVDNFL 95
++I ELR G + + ++++ +
Sbjct: 61 RNQISELRTLGCAAMAIDNESQINSMM 87
>gi|319955978|ref|YP_004167241.1| vrr-nuc domain-containing protein [Nitratifractor salsuginis DSM
16511]
gi|319418382|gb|ADV45492.1| VRR-NUC domain-containing protein [Nitratifractor salsuginis DSM
16511]
Length = 92
Score = 60.5 bits (146), Expect = 7e-08, Method: Composition-based stats.
Identities = 23/87 (26%), Positives = 38/87 (43%), Gaps = 1/87 (1%)
Query: 9 QTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQ 68
TE+ ++KR++ K + + K R G PD ++ NG IEVK P + Q
Sbjct: 1 MTEQKIQKRILRFLKDIGAYPAKIVTGNRAGIPD-ILACVNGRFVAIEVKVPGKEATKLQ 59
Query: 69 MSEIEELRRRGQRVKVLVSMEEVDNFL 95
++ ++ G V +EV L
Sbjct: 60 DLHLQRIKEAGGVAFVAHGADEVREAL 86
>gi|301321600|gb|ADK68990.1| hypothetical protein KTR9_4909 [Gordonia sp. KTR9]
Length = 139
Score = 60.1 bits (145), Expect = 9e-08, Method: Composition-based stats.
Identities = 19/73 (26%), Positives = 32/73 (43%), Gaps = 4/73 (5%)
Query: 11 EKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGG----LWWIEVKKPTGRLSH 66
E+ VE LV ++ D K + RR DRL+I + + ++E+K+P
Sbjct: 2 ERIVENHLVASCQRHDLLCLKVTSPARRAITDRLVIGHDDRSDPVVLFLELKRPGTVPRA 61
Query: 67 QQMSEIEELRRRG 79
Q + +R G
Sbjct: 62 SQKAMFARMRVHG 74
>gi|291336802|gb|ADD96337.1| hypothetical protein BACINT_02220 [uncultured organism
MedDCM-OCT-S08-C700]
Length = 79
Score = 59.7 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 9 QTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQ 68
TE +K+L+ +K V K + G PD + + P+ + +IEVK P GRLS Q
Sbjct: 1 MTEAQYQKKLIDRHEKEGWTVIKLIMCNKAGLPDLICMKPD-EVKFIEVKGPKGRLSEVQ 59
Query: 69 MSEIEELRRRGQRVKVL 85
IEEL+ G V+V+
Sbjct: 60 KYRIEELKEAGFDVEVM 76
>gi|212638493|ref|YP_002315013.1| RecB family endonuclease [Anoxybacillus flavithermus WK1]
gi|212559973|gb|ACJ33028.1| RecB family endonuclease [Anoxybacillus flavithermus WK1]
Length = 105
Score = 59.3 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 3/96 (3%)
Query: 9 QTEKDVEKRLVTGAKKLDCWVRKA--SFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSH 66
TEK +E ++ +L W K S + G PD +I + IE+K+P G++S
Sbjct: 1 MTEKTIENQIKRYLDRLGVWYMKVHGSMYQKAGVPD-IIACIDSVFVGIEIKRPGGKVSV 59
Query: 67 QQMSEIEELRRRGQRVKVLVSMEEVDNFLEELACTL 102
Q I+E+ + G V S+E+V + EL L
Sbjct: 60 LQQLNIDEINKNGGCAFVAYSVEDVQRKIAELRHAL 95
>gi|19552945|ref|NP_600947.1| hypothetical protein NCgl1671 [Corynebacterium glutamicum ATCC
13032]
gi|62390622|ref|YP_226024.1| hypothetical protein cg1961 [Corynebacterium glutamicum ATCC
13032]
gi|21324510|dbj|BAB99134.1| Hypothetical protein [Corynebacterium glutamicum ATCC 13032]
gi|41325960|emb|CAF20123.1| hypothetical protein predicted by Glimmer [Corynebacterium
glutamicum ATCC 13032]
Length = 149
Score = 59.0 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 18/83 (21%), Positives = 33/83 (39%), Gaps = 5/83 (6%)
Query: 11 EKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLI--ITPNGG--LWWIEVKKPTGRLSH 66
E +E+ L + K + G PDR++ I G ++E+K+P
Sbjct: 18 ETVIEQALQDACAVHNIMYLKFTS-SVTGVPDRILQGINAAGQPLTVYVELKRPGTHPRT 76
Query: 67 QQMSEIEELRRRGQRVKVLVSME 89
+Q + L G V V+ + +
Sbjct: 77 RQKEVMNRLINHGALVFVVDARD 99
>gi|313895715|ref|ZP_07829271.1| VRR-NUC domain protein [Selenomonas sp. oral taxon 137 str.
F0430]
gi|312975841|gb|EFR41300.1| VRR-NUC domain protein [Selenomonas sp. oral taxon 137 str.
F0430]
Length = 93
Score = 58.2 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 27/92 (29%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
Query: 9 QTEKDVEKRLVTGAKKL-DCWVRKASFV--GRRGCPDRLIITPNGGLWWIEVKKPTGRLS 65
E + K ++T K DC+ KA G G PD +I G + EVK G+ +
Sbjct: 1 MKESSIVKSILTYLKSRPDCFCWKAHGGLYGTAGIPD-IIACIGGKFYGFEVKTERGKPT 59
Query: 66 HQQMSEIEELRRRGQRVKVLVSMEEVDNFLEE 97
Q + I ++ G V+ S+ +V LEE
Sbjct: 60 ALQEATIRKINAVGGIAAVVRSVADVKAVLEE 91
>gi|125974152|ref|YP_001038062.1| hypothetical protein Cthe_1646 [Clostridium thermocellum ATCC
27405]
gi|125714377|gb|ABN52869.1| hypothetical protein Cthe_1646 [Clostridium thermocellum ATCC
27405]
Length = 100
Score = 57.0 bits (137), Expect = 8e-07, Method: Composition-based stats.
Identities = 26/92 (28%), Positives = 45/92 (48%), Gaps = 4/92 (4%)
Query: 9 QTEKDVEKRLVTGAKKL-DCWVRKASFV--GRRGCPDRLIITPNGGLWWIEVKKPTGRLS 65
+EK + +++ K + C+ K G G PD +I NG EVK P+G+ +
Sbjct: 1 MSEKSIVTKILRYLKTVPGCFCWKEHGGMYGTAGLPD-IIACVNGRFIAFEVKTPSGKTT 59
Query: 66 HQQMSEIEELRRRGQRVKVLVSMEEVDNFLEE 97
Q + I+++ G V+ S++EV LE+
Sbjct: 60 KLQEATIKKILNAGGVAAVVHSVDEVKVILEK 91
>gi|220922591|ref|YP_002497893.1| VRR-NUC domain-containing protein [Methylobacterium nodulans ORS
2060]
gi|219947198|gb|ACL57590.1| VRR-NUC domain protein [Methylobacterium nodulans ORS 2060]
Length = 129
Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/68 (35%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Query: 24 KLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVK 83
K + K V G PD ++ G + IEVK P G LS Q + + LR RG V
Sbjct: 37 KREGVAFKEMGV-EAGHPDLIVYGRGGRCFLIEVKAPGGSLSASQRAFLPGLRERGFPVH 95
Query: 84 VLVSMEEV 91
V+ S++E
Sbjct: 96 VVDSVDEA 103
>gi|256003542|ref|ZP_05428532.1| VRR-NUC domain protein [Clostridium thermocellum DSM 2360]
gi|255992566|gb|EEU02658.1| VRR-NUC domain protein [Clostridium thermocellum DSM 2360]
gi|316941394|gb|ADU75428.1| VRR-NUC domain-containing protein [Clostridium thermocellum DSM
1313]
Length = 95
Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 24/92 (26%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Query: 9 QTEKDVEKRLVTGAKKL-DCWVRKASFV--GRRGCPDRLIITPNGGLWWIEVKKPTGRLS 65
+E+ + +++ K + C+ K G G PD +I NG E+K P+G+ +
Sbjct: 1 MSERSIVTKVLRYLKTVPGCFCWKEHGGMYGTAGIPD-IIACVNGRFIAFEIKTPSGKTT 59
Query: 66 HQQMSEIEELRRRGQRVKVLVSMEEVDNFLEE 97
Q + I ++ G V+ S++EV LE+
Sbjct: 60 KLQEATIRKILNAGGVAAVVHSVDEVKVILEK 91
>gi|220924928|ref|YP_002500230.1| VRR-NUC domain-containing protein [Methylobacterium nodulans ORS
2060]
gi|219949535|gb|ACL59927.1| VRR-NUC domain protein [Methylobacterium nodulans ORS 2060]
Length = 129
Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 24 KLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVK 83
KL+ K V G PD ++ G + IEVK P G LS Q + + LR RG V
Sbjct: 37 KLEGVAFKEMGV-EAGHPDLIVYGRGGRCFLIEVKAPGGSLSASQRAFLPGLRERGFPVH 95
Query: 84 VLVSMEE 90
V+ S+E+
Sbjct: 96 VVDSVED 102
>gi|326336482|ref|ZP_08202652.1| VRR-NUC domain protein [Capnocytophaga sp. oral taxon 338 str.
F0234]
gi|325691355|gb|EGD33324.1| VRR-NUC domain protein [Capnocytophaga sp. oral taxon 338 str.
F0234]
Length = 112
Score = 55.5 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 14/63 (22%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Query: 38 RGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLVSMEEVDNFL-E 96
G D ++ P+G + +IE+K + + Q + ++ G V S EE + +
Sbjct: 49 AGVADLTVLLPHGKILYIEMKVKGNKQTPNQKTFQQKAEALGHTYYVCYSFEEFKEIITK 108
Query: 97 ELA 99
E+
Sbjct: 109 EIQ 111
>gi|220923738|ref|YP_002499040.1| VRR-NUC domain-containing protein [Methylobacterium nodulans ORS
2060]
gi|219948345|gb|ACL58737.1| VRR-NUC domain protein [Methylobacterium nodulans ORS 2060]
Length = 129
Score = 54.7 bits (131), Expect = 4e-06, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Query: 24 KLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVK 83
KL+ K V G PD ++ G + IEVK P G LS Q + + LR RG V
Sbjct: 37 KLEGVAFKEMGV-EAGHPDLIVYGRGGRCFLIEVKAPGGSLSASQRAFLPVLRERGFPVH 95
Query: 84 VLVSMEE 90
V+ +E+
Sbjct: 96 VVDCVED 102
>gi|323485272|ref|ZP_08090622.1| VRR-NUC domain-containing protein [Clostridium symbiosum
WAL-14163]
gi|323401450|gb|EGA93798.1| VRR-NUC domain-containing protein [Clostridium symbiosum
WAL-14163]
Length = 118
Score = 54.3 bits (130), Expect = 5e-06, Method: Composition-based stats.
Identities = 25/90 (27%), Positives = 40/90 (44%), Gaps = 6/90 (6%)
Query: 11 EKDVEKRLVTGAKKLDCWVRKA---SFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQ 67
EK+ E ++ K WV K + + G PD L+ +G IEVK P G S
Sbjct: 4 EKNFENKVKKFLKDKGAWVLKYWGGAAYTKSGIPDLLV-CSDGRFLGIEVKAPNGEPSLL 62
Query: 68 QMSEIEELRRRGQRVKVLV--SMEEVDNFL 95
Q+ ++++R G +L E+ F+
Sbjct: 63 QLVNLKKIRESGGYGILLYPKDFEQFKMFI 92
>gi|291336952|gb|ADD96479.1| VRR NUC domain containing protein [uncultured organism
MedDCM-OCT-S09-C94]
Length = 120
Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats.
Identities = 26/99 (26%), Positives = 39/99 (39%), Gaps = 14/99 (14%)
Query: 3 FYSFHYQTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTG 62
F FH E L KK+ K GCPD ++ P G + +IE+K G
Sbjct: 24 FRHFHVPNEGKRSIYLHAQMKKMG---LK------SGCPDIIVEYPMGKILYIELKNEKG 74
Query: 63 RLSHQQMSEIEELRRRGQRVKVLVS-----MEEVDNFLE 96
RLS Q + + G V+ +++V +E
Sbjct: 75 RLSDNQKLWAVQSKGLGTPHFVVKGGLTECLDQVKQIIE 113
>gi|220922463|ref|YP_002497765.1| VRR-NUC domain-containing protein [Methylobacterium nodulans ORS
2060]
gi|219947070|gb|ACL57462.1| VRR-NUC domain protein [Methylobacterium nodulans ORS 2060]
Length = 129
Score = 53.6 bits (128), Expect = 9e-06, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Query: 24 KLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVK 83
KL+ K V G PD ++ G + IEVK P G LS Q + + LR RG V
Sbjct: 37 KLEGVAFKEMGV-EAGHPDLIVYGRGGRCFLIEVKAPGGSLSASQRAFLPGLRERGFPVH 95
Query: 84 VLVSMEE 90
V+ +E+
Sbjct: 96 VVDCVED 102
>gi|319762281|ref|YP_004126218.1| vrr-nuc domain-containing protein [Alicycliphilus denitrificans BC]
gi|317116842|gb|ADU99330.1| VRR-NUC domain-containing protein [Alicycliphilus denitrificans BC]
Length = 138
Score = 52.0 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/83 (28%), Positives = 35/83 (42%), Gaps = 6/83 (7%)
Query: 17 RLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELR 76
R+ TGA K+ + + GCPD L +G +EVK GRL +Q + +R
Sbjct: 60 RMNTGAAKVGNRFIRFGWP---GCPDVLGQLKDGRFLGVEVKAQAGRLRPEQALFLARIR 116
Query: 77 RRGQRVKVLVSMEEVDNFLEELA 99
G V + + L EL
Sbjct: 117 AAGGVAFV---ARDCRDVLRELR 136
>gi|149915042|ref|ZP_01903571.1| hypothetical protein RAZWK3B_16760 [Roseobacter sp. AzwK-3b]
gi|149915252|ref|ZP_01903780.1| hypothetical protein RAZWK3B_15483 [Roseobacter sp. AzwK-3b]
gi|149810973|gb|EDM70812.1| hypothetical protein RAZWK3B_15483 [Roseobacter sp. AzwK-3b]
gi|149811230|gb|EDM71067.1| hypothetical protein RAZWK3B_16760 [Roseobacter sp. AzwK-3b]
Length = 146
Score = 52.0 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 27/63 (42%), Gaps = 3/63 (4%)
Query: 39 GCPDRLIITPNGGLW--WIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLVSMEEVDNFLE 96
G PD ++ P + + EVK Q E LR G RV V+ S+++V L
Sbjct: 58 GFPDLIV-LPYANIGALFFEVKAEGNYADKNQRDMHEALRALGYRVAVVRSIDDVREALA 116
Query: 97 ELA 99
E
Sbjct: 117 EWG 119
>gi|125974242|ref|YP_001038152.1| hypothetical protein Cthe_1738 [Clostridium thermocellum ATCC
27405]
gi|125714467|gb|ABN52959.1| conserved hypothetical protein [Clostridium thermocellum ATCC
27405]
Length = 121
Score = 51.6 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 28/97 (28%), Positives = 40/97 (41%), Gaps = 6/97 (6%)
Query: 9 QTEKDVEKRLVTGAKKL-DCWVRKASFVG--RRGCPDRLIITPNGGLWWIEVKKPTGRLS 65
TEK + +++ K L W K G R G PD LI NG IE+K G+ +
Sbjct: 1 MTEKQFQTKVIKYLKTLSKTWYFKVFGGGFQRSGIPD-LICCINGVFVAIELKAEKGKPT 59
Query: 66 HQQMSEIEELRRRGQRVKVLV--SMEEVDNFLEELAC 100
Q I+ + G +L EE +EE+
Sbjct: 60 ELQKMNIKNINEAGGIGIILYPSGFEEFKKLIEEVLA 96
>gi|85859013|ref|YP_461215.1| putative cytoplasmic protein [Syntrophus aciditrophicus SB]
gi|85722104|gb|ABC77047.1| hypothetical cytosolic protein [Syntrophus aciditrophicus SB]
Length = 105
Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 30/70 (42%), Gaps = 3/70 (4%)
Query: 27 CWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLV 86
K GR G PD LI NG IEVK G+ + Q + + G V+
Sbjct: 38 GQFYKM---GRPGSPDLLIFLKNGRCAHIEVKNEKGKQNEAQKEYEQAVTDLGHDYHVVR 94
Query: 87 SMEEVDNFLE 96
S+E+V+ L
Sbjct: 95 SVEQVEQLLN 104
>gi|213157759|ref|YP_002320557.1| hypothetical protein AB57_3238 [Acinetobacter baumannii AB0057]
gi|301346503|ref|ZP_07227244.1| hypothetical protein AbauAB0_09664 [Acinetobacter baumannii AB056]
gi|301594702|ref|ZP_07239710.1| hypothetical protein AbauAB059_02795 [Acinetobacter baumannii
AB059]
gi|213056919|gb|ACJ41821.1| hypothetical protein AB57_3238 [Acinetobacter baumannii AB0057]
Length = 141
Score = 51.3 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Query: 29 VRKASFVG-RRGCPDRLIITPNGGL--WWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVL 85
K +G + G PD +I PNG + WIE+K G+L Q I+ L +G KV
Sbjct: 66 AAKFKKLGVKAGVPDLQLIVPNGEIHGLWIELKSKKGKLQPSQRLMIQRLEEQGYMCKVC 125
Query: 86 VSMEEV 91
+E
Sbjct: 126 FGADEA 131
>gi|260556797|ref|ZP_05829015.1| PmgM [Acinetobacter baumannii ATCC 19606]
gi|260410056|gb|EEX03356.1| PmgM [Acinetobacter baumannii ATCC 19606]
Length = 141
Score = 51.3 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Query: 29 VRKASFVG-RRGCPDRLIITPNGGL--WWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVL 85
K +G + G PD +I PNG + WIE+K G+L Q I+ L +G KV
Sbjct: 66 AAKFKKLGVKAGVPDLQLIVPNGEIHGLWIELKSKKGKLQPSQRLMIQRLEEQGYMCKVC 125
Query: 86 VSMEEV 91
+E
Sbjct: 126 FGADEA 131
>gi|281418296|ref|ZP_06249316.1| VRR-NUC domain protein [Clostridium thermocellum JW20]
gi|281409698|gb|EFB39956.1| VRR-NUC domain protein [Clostridium thermocellum JW20]
Length = 100
Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats.
Identities = 24/94 (25%), Positives = 44/94 (46%), Gaps = 4/94 (4%)
Query: 9 QTEKDVEKRLVTGAKKL-DCWVRKASFV--GRRGCPDRLIITPNGGLWWIEVKKPTGRLS 65
+EK + +++ + + C+ K G G PD +I NG EVK +G+ +
Sbjct: 1 MSEKGIVTKVLRYLRTVPGCFCWKEHGGMYGTAGIPD-IIACVNGRFVAFEVKTASGKAT 59
Query: 66 HQQMSEIEELRRRGQRVKVLVSMEEVDNFLEELA 99
Q + I+++ G V+ S++EV LE+
Sbjct: 60 KLQEATIKKILNVGGVAAVVRSVDEVKVILEKYG 93
>gi|291548667|emb|CBL24929.1| VRR-NUC domain [Ruminococcus torques L2-14]
Length = 118
Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats.
Identities = 25/91 (27%), Positives = 40/91 (43%), Gaps = 8/91 (8%)
Query: 11 EKDVEKRLVTGAKKLDCWVRKASFVGRR----GCPDRLIITPNGGLWWIEVKKPTGRLSH 66
EK+ E ++ K W+ K + G G PD L+ +G IEVK P G S
Sbjct: 4 EKNFENKVKAFLKDTGAWLLKY-WGGAAYTKSGIPDLLV-CSDGCFLGIEVKAPNGEPSL 61
Query: 67 QQMSEIEELRRRGQRVKVLV--SMEEVDNFL 95
Q+ ++++R G +L E+ F+
Sbjct: 62 LQLVNLKKIRESGGYGILLYPKDFEQFKMFI 92
>gi|294783587|ref|ZP_06748911.1| holliday junction resolvase Hjc [Fusobacterium sp. 1_1_41FAA]
gi|294480465|gb|EFG28242.1| holliday junction resolvase Hjc [Fusobacterium sp. 1_1_41FAA]
Length = 108
Score = 50.1 bits (119), Expect = 9e-05, Method: Composition-based stats.
Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 4/91 (4%)
Query: 10 TEKDVEKRLVTGAKKLDCWVRKA--SFVGRRGCPDRLIITPNGGLWWIEVKKP-TGRLSH 66
EK VE ++ K W K S G PD ++ +G IEVK+ G +S
Sbjct: 15 KEKAVENKIKKWLKDKGYWFFKVHGSIFQPSGIPD-ILACIDGKFVAIEVKRTKGGVVSP 73
Query: 67 QQMSEIEELRRRGQRVKVLVSMEEVDNFLEE 97
Q ++I +++ G V SMEE L+E
Sbjct: 74 LQKAQIAKIKENGGIAGVASSMEEFLEILKE 104
>gi|306827204|ref|ZP_07460494.1| phage protein [Streptococcus pyogenes ATCC 10782]
gi|304430660|gb|EFM33679.1| phage protein [Streptococcus pyogenes ATCC 10782]
Length = 116
Score = 50.1 bits (119), Expect = 9e-05, Method: Composition-based stats.
Identities = 27/101 (26%), Positives = 45/101 (44%), Gaps = 13/101 (12%)
Query: 10 TEKDVEKRLVTGAKKLDCWVRKA------SFVGR---RGCP----DRLIITPNGGLWWIE 56
+E D++ + + V +A + GR G P D PNG +++IE
Sbjct: 13 SEHDIQNLIRMELSQAGHMVFRANVGKVKTADGRFFDTGLPKGFCDLFGFKPNGQIFFIE 72
Query: 57 VKKPTGRLSHQQMSEIEELRRRGQRVKVLVSMEEVDNFLEE 97
VK TGR+ +Q +E + RG V V S+E+ + +
Sbjct: 73 VKNETGRIRPEQKKFMEVMASRGALVGVARSVEDALKIVND 113
>gi|223044312|ref|ZP_03614347.1| phage protein [Staphylococcus capitis SK14]
gi|222442280|gb|EEE48390.1| phage protein [Staphylococcus capitis SK14]
Length = 102
Score = 50.1 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/87 (25%), Positives = 41/87 (47%), Gaps = 2/87 (2%)
Query: 10 TEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQM 69
E + + V + D +G D P+G +++IEVKKP G++ +Q+
Sbjct: 16 KENIIFRANVGKVRTADGRFFDTGLP--QGFCDLFGFRPDGQIFFIEVKKPGGKIRDKQI 73
Query: 70 SEIEELRRRGQRVKVLVSMEEVDNFLE 96
IE ++++G V S+E+ +E
Sbjct: 74 KFIETVKKKGALAGVAYSVEDAIEIIE 100
>gi|170755794|ref|YP_001781761.1| holliday junction resolvase Hjc [Clostridium botulinum B1 str.
Okra]
gi|169121006|gb|ACA44842.1| holliday junction resolvase Hjc [Clostridium botulinum B1 str.
Okra]
Length = 98
Score = 49.7 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/82 (29%), Positives = 34/82 (41%), Gaps = 4/82 (4%)
Query: 11 EKDVEKRLVTGAKKL-DCWVRK-ASFV-GRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQ 67
EK E + +L W K + + G PD +I NG L IEVK P G+ S
Sbjct: 4 EKKFENEIKKFLSELPKTWFFKYWAGPMSKAGIPD-IIACVNGKLVGIEVKAPNGKPSEL 62
Query: 68 QMSEIEELRRRGQRVKVLVSME 89
Q I ++ G +L +
Sbjct: 63 QKRNIRLIQESGGVGYILYPKD 84
>gi|262372948|ref|ZP_06066227.1| conserved hypothetical protein [Acinetobacter junii SH205]
gi|262312973|gb|EEY94058.1| conserved hypothetical protein [Acinetobacter junii SH205]
Length = 141
Score = 49.7 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Query: 29 VRKASFVG-RRGCPDRLIITPNGGL--WWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVL 85
K +G + G PD ++ PNG + WIE+K G+L Q I+ L +G KV
Sbjct: 66 AAKFKKMGVKAGVPDLQLLVPNGLIHGLWIELKSKAGKLQPSQRLMIQRLEEQGYMCKVC 125
Query: 86 VSMEEV 91
+E
Sbjct: 126 FGADEA 131
>gi|77360920|ref|YP_340495.1| hypothetical protein PSHAa1996 [Pseudoalteromonas haloplanktis
TAC125]
gi|76875831|emb|CAI87052.1| conserved protein of unknown function; putative enzyme
[Pseudoalteromonas haloplanktis TAC125]
Length = 730
Score = 49.3 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Query: 38 RGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKV 84
G PD ++I NG + + EVK P +L Q++ I+ L+ G V +
Sbjct: 509 DGYPDLMVIH-NGKVHFEEVKAPGDKLRRNQLTTIDNLKSSGFEVHI 554
>gi|119471121|ref|ZP_01613653.1| hypothetical protein ATW7_09096 [Alteromonadales bacterium TW-7]
gi|119445777|gb|EAW27059.1| hypothetical protein ATW7_09096 [Alteromonadales bacterium TW-7]
Length = 745
Score = 49.3 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Query: 38 RGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKV 84
G PD ++I NG + + EVK P +L Q++ I+ L+ G V +
Sbjct: 521 DGYPDLMVI-NNGQVHFEEVKAPGDKLRRNQLTTIDNLKNVGFTVHI 566
>gi|237737480|ref|ZP_04567961.1| predicted protein [Fusobacterium mortiferum ATCC 9817]
gi|229421342|gb|EEO36389.1| predicted protein [Fusobacterium mortiferum ATCC 9817]
Length = 117
Score = 48.9 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/68 (36%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 30 RKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLVSME 89
RK ++G PD +I NG +EVK PTG+ S +Q E+ + G V+ S E
Sbjct: 46 RKLPTGAKKGIPDIWVII-NGKTIGLEVKTPTGKQSKEQKEIQEKFIKNGADYYVVRSYE 104
Query: 90 EVDNFLEE 97
EV N L +
Sbjct: 105 EVKNILNK 112
>gi|71903675|ref|YP_280478.1| phage protein [Streptococcus pyogenes MGAS6180]
gi|71802770|gb|AAX72123.1| phage protein [Streptococcus pyogenes MGAS6180]
Length = 94
Score = 48.9 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 2/79 (2%)
Query: 19 VTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRR 78
V K D +G D PNG +++IEVK TGR+ +Q +E + R
Sbjct: 15 VGKVKTADGRFFDTGLP--KGFCDLFGFKPNGQIFFIEVKNETGRIRPEQKKFMEVMASR 72
Query: 79 GQRVKVLVSMEEVDNFLEE 97
G V V S+E+ N + +
Sbjct: 73 GALVGVARSVEDALNIVND 91
>gi|220924122|ref|YP_002499424.1| VRR-NUC domain-containing protein [Methylobacterium nodulans ORS
2060]
gi|219948729|gb|ACL59121.1| VRR-NUC domain protein [Methylobacterium nodulans ORS 2060]
Length = 126
Score = 48.6 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 27/61 (44%)
Query: 39 GCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLVSMEEVDNFLEEL 98
G PD + +G + +EVK G LS Q I LR RG V V+ +E + E
Sbjct: 51 GHPDLIAYGRDGRVLLLEVKAAGGSLSAAQRRLIPNLRERGFPVAVVRDIEGAVQAMREA 110
Query: 99 A 99
Sbjct: 111 G 111
>gi|332038297|gb|EGI74742.1| DNA polymerase III epsilon subunit [Pseudoalteromonas haloplanktis
ANT/505]
Length = 671
Score = 48.6 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 38 RGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKV 84
G PD ++I NG + + EVK P +L Q++ I+ L++ G V +
Sbjct: 509 DGYPDLMVI-NNGQVHFEEVKAPGDKLRRNQLTTIDNLKKVGFTVHI 554
>gi|254304001|ref|ZP_04971359.1| hypothetical protein FNP_1670 [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
gi|148324193|gb|EDK89443.1| hypothetical protein FNP_1670 [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
Length = 107
Score = 48.6 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 27/91 (29%), Positives = 42/91 (46%), Gaps = 4/91 (4%)
Query: 10 TEKDVEKRLVTGAKKLDCWVRKA--SFVGRRGCPDRLIITPNGGLWWIEVKKP-TGRLSH 66
EK VE ++ K W K S G PD ++ NG IEVK+ G +S
Sbjct: 14 KEKAVENKIKKWLKDKGYWFFKVHGSIFQPAGIPD-ILACVNGKFVAIEVKRTKGGVVSP 72
Query: 67 QQMSEIEELRRRGQRVKVLVSMEEVDNFLEE 97
Q ++I++++ G V +M+E L+E
Sbjct: 73 LQKAQIQKIKENGGIAGVASTMDEFLEILKE 103
>gi|21910491|ref|NP_664759.1| hypothetical protein SpyM3_0955 [Streptococcus pyogenes MGAS315]
gi|28876239|ref|NP_795452.1| hypothetical protein SpyM3_0955 [Streptococcus pyogenes phage
315.2]
gi|28895812|ref|NP_802162.1| hypothetical protein SPs0900 [Streptococcus pyogenes SSI-1]
gi|21904690|gb|AAM79562.1| conserved hypothetical protein - phage-associated [Streptococcus
pyogenes MGAS315]
gi|28811061|dbj|BAC63995.1| hypothetical protein [Streptococcus pyogenes SSI-1]
Length = 106
Score = 48.6 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/79 (29%), Positives = 35/79 (44%), Gaps = 2/79 (2%)
Query: 19 VTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRR 78
V K D +G D PNG +++IEVK TGR+ +Q +E + R
Sbjct: 27 VGKVKTADGRFFDTGLP--KGFCDLFGFKPNGQIFFIEVKNETGRIRPEQKKFMEVMASR 84
Query: 79 GQRVKVLVSMEEVDNFLEE 97
G V V S+E+ + +
Sbjct: 85 GALVGVARSVEDALKIVND 103
>gi|19746258|ref|NP_607394.1| hypothetical protein spyM18_1287 [Streptococcus pyogenes
MGAS8232]
gi|19748445|gb|AAL97893.1| hypothetical phage protein [Streptococcus pyogenes MGAS8232]
Length = 94
Score = 48.2 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 23/79 (29%), Positives = 35/79 (44%), Gaps = 2/79 (2%)
Query: 19 VTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRR 78
V K D +G D PNG +++IEVK TGR+ +Q +E + R
Sbjct: 15 VGKVKTADGRFFDTGLP--KGFCDLFGFKPNGQIFFIEVKNETGRIRPEQKKFMEVMASR 72
Query: 79 GQRVKVLVSMEEVDNFLEE 97
G V V S+E+ + +
Sbjct: 73 GALVGVARSVEDALKIVND 91
>gi|94988184|ref|YP_596285.1| phage protein [Streptococcus phage 9429.1]
gi|94990064|ref|YP_598164.1| phage protein [Streptococcus phage 10270.1]
gi|94993976|ref|YP_602074.1| phage protein [Streptococcus phage 10750.1]
gi|94541692|gb|ABF31741.1| phage protein [Streptococcus phage 9429.1]
gi|94543572|gb|ABF33620.1| phage protein [Streptococcus phage 10270.1]
gi|94547484|gb|ABF37530.1| phage protein [Streptococcus phage 10750.1]
Length = 106
Score = 48.2 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 22/79 (27%), Positives = 35/79 (44%), Gaps = 2/79 (2%)
Query: 19 VTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRR 78
V K D +G D P+G +++IEVK TGR+ +Q +E + R
Sbjct: 27 VGKVKTADGRFFDTGLP--KGFCDLFGFKPDGQVFFIEVKNETGRVRPEQKKFMEVMASR 84
Query: 79 GQRVKVLVSMEEVDNFLEE 97
G V V S+E+ + +
Sbjct: 85 GALVGVARSVEDALKIVND 103
>gi|220923974|ref|YP_002499276.1| VRR-NUC domain-containing protein [Methylobacterium nodulans ORS
2060]
gi|219948581|gb|ACL58973.1| VRR-NUC domain protein [Methylobacterium nodulans ORS 2060]
Length = 126
Score = 47.8 bits (113), Expect = 4e-04, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 27/61 (44%)
Query: 39 GCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLVSMEEVDNFLEEL 98
G PD + +G + +EVK G LS Q I LR RG V V+ +E + E
Sbjct: 51 GHPDLIAYGRDGRVLLLEVKAAGGSLSAVQRRLIPNLRERGFPVAVVRDVEGAVQAMHEA 110
Query: 99 A 99
Sbjct: 111 G 111
>gi|192290701|ref|YP_001991306.1| VRR-NUC domain protein [Rhodopseudomonas palustris TIE-1]
gi|192284450|gb|ACF00831.1| VRR-NUC domain protein [Rhodopseudomonas palustris TIE-1]
Length = 160
Score = 47.8 bits (113), Expect = 4e-04, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
Query: 36 GRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLVSMEEVDNFL 95
G G PD + I G +++E+K GR+ Q + LR G V + E L
Sbjct: 82 GSAGVPD-ICIIWRGVTYFLEMKALKGRVRPAQHVMMARLRGAGAICAVAKGLHEAIAQL 140
Query: 96 EELA 99
E+
Sbjct: 141 EKWG 144
>gi|158320330|ref|YP_001512837.1| VRR-NUC domain-containing protein [Alkaliphilus oremlandii
OhILAs]
gi|158140529|gb|ABW18841.1| VRR-NUC domain protein [Alkaliphilus oremlandii OhILAs]
Length = 96
Score = 47.8 bits (113), Expect = 5e-04, Method: Composition-based stats.
Identities = 23/94 (24%), Positives = 46/94 (48%), Gaps = 6/94 (6%)
Query: 9 QTEKDVEKRLVTGAKKL-DCWVRKASFVGR---RGCPDRLIITPNGGLWWIEVKKPTGRL 64
EK ++ ++V K+ + W K + G G PD LI+ G +E+K+P +
Sbjct: 1 MKEKAIQNKIVQYLKQQPNTWFFK-THGGMYQVAGIPD-LILCYMGHFVALEIKRPGEKP 58
Query: 65 SHQQMSEIEELRRRGQRVKVLVSMEEVDNFLEEL 98
+ Q +++++ G V+ S+ +V + L+ L
Sbjct: 59 TKLQEKVLKDIQEAGGISVVVHSLLDVKSVLDTL 92
>gi|94990321|ref|YP_598421.1| phage protein [Streptococcus phage 10270.2]
gi|94994244|ref|YP_602342.1| phage protein [Streptococcus phage 10750.2]
gi|94543829|gb|ABF33877.1| phage protein [Streptococcus phage 10270.2]
gi|94547752|gb|ABF37798.1| phage protein [Streptococcus phage 10750.2]
Length = 106
Score = 47.8 bits (113), Expect = 5e-04, Method: Composition-based stats.
Identities = 22/79 (27%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
Query: 19 VTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRR 78
V K +D + +G D P+G +++IEVK TGR+ +Q +E + R
Sbjct: 27 VGKVKTVDGRLFDTGLP--KGFCDLFGFKPDGQIFFIEVKNETGRVRPEQKKFMEVMASR 84
Query: 79 GQRVKVLVSMEEVDNFLEE 97
G V V S+E+ + +
Sbjct: 85 GALVGVARSVEDALKIVND 103
>gi|220921970|ref|YP_002497271.1| VRR-NUC domain-containing protein [Methylobacterium nodulans ORS
2060]
gi|219946576|gb|ACL56968.1| VRR-NUC domain protein [Methylobacterium nodulans ORS 2060]
Length = 127
Score = 47.8 bits (113), Expect = 5e-04, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 26/61 (42%)
Query: 39 GCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLVSMEEVDNFLEEL 98
G PD + +G + EVK G LS Q I LR RG V V+ +E + E
Sbjct: 52 GHPDLIAYGRDGRVLLFEVKAAGGSLSAAQRRLIPNLRERGFPVAVVRDVEGAVQAMREA 111
Query: 99 A 99
Sbjct: 112 G 112
>gi|237737302|ref|ZP_04567783.1| predicted protein [Fusobacterium mortiferum ATCC 9817]
gi|229421164|gb|EEO36211.1| predicted protein [Fusobacterium mortiferum ATCC 9817]
Length = 117
Score = 47.4 bits (112), Expect = 6e-04, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 38 RGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLVSMEEVDNFLEE 97
+G PD +I NG +EVK PTG+ S +Q E+ + G V+ S EEV N L++
Sbjct: 54 KGIPDIWVII-NGKTIGLEVKTPTGKQSKEQKEIQEKFIKNGADYYVVRSYEEVKNILDK 112
>gi|21910874|ref|NP_665142.1| hypothetical protein SpyM3_1338 [Streptococcus pyogenes MGAS315]
gi|28876420|ref|NP_795621.1| hypothetical protein SpyM3_1338 [Streptococcus pyogenes phage
315.5]
gi|28895436|ref|NP_801786.1| hypothetical protein SPs0524 [Streptococcus pyogenes SSI-1]
gi|21905080|gb|AAM79945.1| conserved hypothetical protein - phage-associated [Streptococcus
pyogenes MGAS315]
gi|28810682|dbj|BAC63619.1| hypothetical protein [Streptococcus pyogenes SSI-1]
Length = 106
Score = 47.4 bits (112), Expect = 6e-04, Method: Composition-based stats.
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 2/79 (2%)
Query: 19 VTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRR 78
V K +D + +G D P+G +++IEVK TGR+ +Q + +E + R
Sbjct: 27 VGKVKTVDGRLFDTGLP--KGFCDLFGFKPDGQIFFIEVKNETGRVRPEQKNFMEVMASR 84
Query: 79 GQRVKVLVSMEEVDNFLEE 97
G V V S+E+ + +
Sbjct: 85 GALVGVARSVEDALKIVND 103
>gi|167630915|ref|YP_001681414.1| hypothetical protein HM1_2894 [Heliobacterium modesticaldum Ice1]
gi|167593655|gb|ABZ85403.1| hypothetical protein HM1_2894 [Heliobacterium modesticaldum Ice1]
Length = 144
Score = 47.4 bits (112), Expect = 7e-04, Method: Composition-based stats.
Identities = 22/91 (24%), Positives = 40/91 (43%), Gaps = 4/91 (4%)
Query: 9 QTEKDVEKRLVTGAKKL-DCWVRKASFV--GRRGCPDRLIITPNGGLWWIEVKKPTGRLS 65
E+D+ ++ K + +C+ K G G PD +I G EVK +GRL+
Sbjct: 1 MAERDIVNAIMRYLKSVPECFCWKEHGGMYGTAGLPD-IICCIKGRFIAFEVKTASGRLT 59
Query: 66 HQQMSEIEELRRRGQRVKVLVSMEEVDNFLE 96
Q + + ++R + S+ +V L+
Sbjct: 60 KLQEATMRKIRDAKGEAFKVTSVGDVRTVLD 90
>gi|256819730|ref|YP_003141009.1| VRR-NUC domain-containing protein [Capnocytophaga ochracea DSM
7271]
gi|256581313|gb|ACU92448.1| VRR-NUC domain protein [Capnocytophaga ochracea DSM 7271]
Length = 120
Score = 47.4 bits (112), Expect = 7e-04, Method: Composition-based stats.
Identities = 15/59 (25%), Positives = 24/59 (40%)
Query: 38 RGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLVSMEEVDNFLE 96
G D +++ P G +IE+K R + Q ++ G V S EE +E
Sbjct: 51 AGVADLVVLLPQGKSLYIEMKVKGNRQTDNQKEFQKKAIALGHTYAVCYSFEEFQQVIE 109
>gi|239995207|ref|ZP_04715731.1| DNA polymerase III, epsilon subunit [Alteromonas macleodii ATCC
27126]
Length = 711
Score = 47.0 bits (111), Expect = 7e-04, Method: Composition-based stats.
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Query: 37 RRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKV 84
R G PD ++ +G L + E+K P +L Q+ I+ L++ G V V
Sbjct: 485 RDGFPDIMVF--DGALRFEEIKAPGDQLRRNQLVSIQRLQQAGFDVAV 530
>gi|223933201|ref|ZP_03625192.1| VRR-NUC domain protein [Streptococcus suis 89/1591]
gi|223898131|gb|EEF64501.1| VRR-NUC domain protein [Streptococcus suis 89/1591]
Length = 106
Score = 47.0 bits (111), Expect = 8e-04, Method: Composition-based stats.
Identities = 27/101 (26%), Positives = 45/101 (44%), Gaps = 13/101 (12%)
Query: 9 QTEKDVEKRLVTGAKKLDCWVRKA------SFVGR---RGCP----DRLIITPNGGLWWI 55
+ E ++ + G + C V +A + GR G P D +G +++I
Sbjct: 2 EKEHKIQNDIRVGLTEAGCLVFRANVGKVRTADGRYFDTGLPKGFSDLFGFRSDGQIFFI 61
Query: 56 EVKKPTGRLSHQQMSEIEELRRRGQRVKVLVSMEEVDNFLE 96
EVK GR+ +Q IE +R+ G V S+E+ N +E
Sbjct: 62 EVKNEKGRVRPEQEKFIERMRKFGALAGVARSVEDALNIVE 102
>gi|168229314|ref|YP_001686835.1| orf41 [Streptococcus phage 858]
gi|155241709|gb|ABT18029.1| orf41 [Streptococcus phage 858]
Length = 106
Score = 47.0 bits (111), Expect = 8e-04, Method: Composition-based stats.
Identities = 24/101 (23%), Positives = 43/101 (42%), Gaps = 13/101 (12%)
Query: 10 TEKDVEKRLVTGAKKLDCWVRKASFVGRR---------GCP----DRLIITPNGGLWWIE 56
+E ++ ++ K V + + R G P D P+G +++IE
Sbjct: 3 SEHSIQNQIRVELSKAGYMVFRINVGKVRMADGRWFDTGAPKGFCDLFGFRPDGQIFFIE 62
Query: 57 VKKPTGRLSHQQMSEIEELRRRGQRVKVLVSMEEVDNFLEE 97
VK GRL Q + +++RG V V S++E + + E
Sbjct: 63 VKNEKGRLREDQKKFMNAMKKRGALVGVARSVKEAMDIVNE 103
>gi|66391798|ref|YP_238522.1| hypothetical protein SPV2972_gp39 [Streptococcus phage 2972]
gi|56718455|gb|AAW27961.1| hypothetical protein [Streptococcus phage 2972]
Length = 106
Score = 47.0 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 25/101 (24%), Positives = 43/101 (42%), Gaps = 13/101 (12%)
Query: 10 TEKDVEKRLVTGAKKLDCWVRKASFVGRR---------GCP----DRLIITPNGGLWWIE 56
TE ++ ++ K V + + R G P D P+G +++IE
Sbjct: 3 TESLIQNQIRVELSKAGYMVFRINVGKVRMADGRWFDTGAPKGFCDLFGFRPDGQIFFIE 62
Query: 57 VKKPTGRLSHQQMSEIEELRRRGQRVKVLVSMEEVDNFLEE 97
VK GRL Q + +++RG V V S++E + + E
Sbjct: 63 VKNEKGRLREDQKKFMNAMKKRGALVGVARSVKEAMDIVNE 103
>gi|91976635|ref|YP_569294.1| hypothetical protein RPD_2158 [Rhodopseudomonas palustris BisB5]
gi|91683091|gb|ABE39393.1| hypothetical protein RPD_2158 [Rhodopseudomonas palustris BisB5]
Length = 160
Score = 47.0 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 26/64 (40%), Gaps = 1/64 (1%)
Query: 36 GRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLVSMEEVDNFL 95
G G PD + I G +++E+K GR+ Q LR G V + E L
Sbjct: 82 GSAGVPD-ICIIWRGVTYFLEMKALKGRVRPAQHVMAARLRGAGAICAVAKGLHEAIAQL 140
Query: 96 EELA 99
E+
Sbjct: 141 EKWG 144
>gi|325479526|gb|EGC82622.1| hypothetical protein HMPREF9290_1237 [Anaerococcus prevotii
ACS-065-V-Col13]
Length = 43
Score = 47.0 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 13/40 (32%), Positives = 20/40 (50%)
Query: 37 RRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELR 76
G PDR+I+ G + IEVK+P Q ++ L+
Sbjct: 1 MTGIPDRIILLTKGKIEIIEVKRPGREPRPIQKKNMDILK 40
>gi|322806867|emb|CBZ04437.1| hypothetical protein H04402_02630 [Clostridium botulinum H04402
065]
Length = 98
Score = 46.6 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 24/82 (29%), Positives = 33/82 (40%), Gaps = 4/82 (4%)
Query: 11 EKDVEKRLVTGAKKL-DCWVRK-ASFV-GRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQ 67
EK E + +L W K S + G PD +I +G IEVK P GR S
Sbjct: 4 EKKFENEIKNFLSELPKTWFYKNWSGPYSKSGIPD-IIACVDGHFVGIEVKAPNGRASEL 62
Query: 68 QMSEIEELRRRGQRVKVLVSME 89
Q I ++ G +L +
Sbjct: 63 QKRNIRLIQESGGVGYILYPKD 84
>gi|9632928|ref|NP_049957.1| hypothetical protein Sfi19p37 [Streptococcus phage Sfi19]
gi|9634998|ref|NP_056714.1| gp106 [Streptococcus phage Sfi11]
gi|5524023|gb|AAD44076.1|AF115102_35 orf106 gp [Streptococcus phage Sfi19]
gi|7523558|gb|AAF63061.1|AF158600_15 gp106 [Streptococcus phage Sfi11]
gi|7523588|gb|AAF63090.1|AF158601_18 gp106 [Streptococcus phage SFi18]
Length = 106
Score = 46.6 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 26/104 (25%), Positives = 44/104 (42%), Gaps = 13/104 (12%)
Query: 10 TEKDVEKRLVTGAKKLDCWVRKASFVGRR---------GCP----DRLIITPNGGLWWIE 56
TE ++ ++ G K V + + R G P D P+G +++IE
Sbjct: 3 TESLIQNQIRVGLSKAGYMVFRINVGKVRMADGRWFDTGAPKGFCDLFGFRPDGQIFFIE 62
Query: 57 VKKPTGRLSHQQMSEIEELRRRGQRVKVLVSMEEVDNFLEELAC 100
VK GRL Q + +++RG V V S++E + + E
Sbjct: 63 VKNEKGRLREDQKKFMNAMKKRGALVGVARSVKEAMDIVNEKQS 106
>gi|315497459|ref|YP_004086263.1| DNA polymerase iii, epsilon subunit [Asticcacaulis excentricus CB
48]
gi|315415471|gb|ADU12112.1| DNA polymerase III, epsilon subunit [Asticcacaulis excentricus CB
48]
Length = 717
Score = 46.6 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 37 RRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVL 85
R G PD L+I P G + +IEVK ++ Q++ + LR+ G +L
Sbjct: 486 RDGFPDLLLIGPCG-VRFIEVKGEGDQVRRHQLARLNLLRQAGFEAGIL 533
>gi|283796844|ref|ZP_06345997.1| VRR-NUC domain protein [Clostridium sp. M62/1]
gi|291075251|gb|EFE12615.1| VRR-NUC domain protein [Clostridium sp. M62/1]
Length = 161
Score = 46.3 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 28/91 (30%), Positives = 43/91 (47%), Gaps = 6/91 (6%)
Query: 10 TEKDVEKRLVTGAK--KLDCWVRKASFV--GRRGCPDRLIITPNGGLWWIEVKKP-TGRL 64
E +K+++ K + K + R+G PD + NG + EVK+P G L
Sbjct: 65 KESYFQKKILDWIKDNAPNAIAWKEAAGPYSRQGIPD-ITCIINGRYYGFEVKRPFIGVL 123
Query: 65 SHQQMSEIEELRRRGQRVKVLVSMEEVDNFL 95
S Q I+++RR G R V+ S +EV L
Sbjct: 124 SKIQEQTIKQIRRAGGRAWVVTSEKEVAEIL 154
>gi|23455863|ref|NP_695093.1| hypothetical protein O1205p15 [Streptococcus phage O1205]
gi|2444095|gb|AAC79531.1| ORF15 [Streptococcus phage O1205]
Length = 86
Score = 45.9 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 31/53 (58%)
Query: 48 PNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLVSMEEVDNFLEELAC 100
P+G +++IEVK GRL Q +E +++RG V V S+++ + + E C
Sbjct: 34 PDGQIFFIEVKNEKGRLRDDQKKFMEAMKKRGALVGVARSVKDAMDIVNEKKC 86
>gi|160944093|ref|ZP_02091323.1| hypothetical protein FAEPRAM212_01595 [Faecalibacterium prausnitzii
M21/2]
gi|158444769|gb|EDP21773.1| hypothetical protein FAEPRAM212_01595 [Faecalibacterium prausnitzii
M21/2]
Length = 138
Score = 45.9 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 23/92 (25%), Positives = 43/92 (46%), Gaps = 5/92 (5%)
Query: 10 TEKDVEKRLVTGA-KKLDCWVRKASFV--GRRGCPDRLIITPNGGLWWIEVKKPT-GRLS 65
+E ++K ++ K++ + K + R+G PD ++ +G + EVK+P G LS
Sbjct: 45 SEAKIQKDILAHLNKQVGGFWWKDAAGPYQRQGIPD-IVGCHDGHFYAFEVKRPLVGELS 103
Query: 66 HQQMSEIEELRRRGQRVKVLVSMEEVDNFLEE 97
Q + + G V+ S+E+V E
Sbjct: 104 AIQRHTLTAINAAGGSAYVVTSVEDVRQVFER 135
>gi|325956970|ref|YP_004292382.1| hypothetical protein LAC30SC_06595 [Lactobacillus acidophilus 30SC]
gi|325333535|gb|ADZ07443.1| hypothetical protein LAC30SC_06595 [Lactobacillus acidophilus 30SC]
Length = 131
Score = 45.5 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 17/80 (21%), Positives = 31/80 (38%), Gaps = 3/80 (3%)
Query: 19 VTGAKKLDCWVRKASFVGRRGCPDRL-IITPNGGLWWIEVKKPTGRLSHQQMSEIEELRR 77
V + D G PD + +++IEVK P GR+ QM+ ++L
Sbjct: 38 VGKVRTPDGRYFSTGAPN--GMPDLFGFRWIDRRIFFIEVKSPAGRIRPDQMAFHQDLMH 95
Query: 78 RGQRVKVLVSMEEVDNFLEE 97
+ S+++ + E
Sbjct: 96 LHVIHGIARSIDDARKIVNE 115
>gi|75764644|ref|ZP_00744078.1| hypothetical protein RBTH_00450 [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|228904535|ref|ZP_04068618.1| hypothetical protein bthur0014_56730 [Bacillus thuringiensis IBL
4222]
gi|74487866|gb|EAO51648.1| hypothetical protein RBTH_00450 [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|228855099|gb|EEM99675.1| hypothetical protein bthur0014_56730 [Bacillus thuringiensis IBL
4222]
Length = 92
Score = 45.5 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 17/84 (20%), Positives = 33/84 (39%), Gaps = 4/84 (4%)
Query: 9 QTEKDVEKRLVTGAKKLDCWVRKASFVGR---RGCPDRLIITPNGGLWWIEVKKPTGRLS 65
E + +++ K+ W K + G PD ++ G IE+K G S
Sbjct: 1 MKESQFQAKVIKYLKEKGVWHVKYWAGSQYTKEGIPD-ILACIGGMFHGIELKTDVGTPS 59
Query: 66 HQQMSEIEELRRRGQRVKVLVSME 89
Q+ I +++ G + +L +
Sbjct: 60 KLQLYNIRKIKDSGGQAYILRPKD 83
>gi|9632454|ref|NP_049426.1| hypothetical protein DT1p37 [Streptococcus phage DT1]
gi|4530174|gb|AAD21914.1| unknown [Streptococcus phage DT1]
Length = 107
Score = 45.5 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 25/100 (25%), Positives = 43/100 (43%), Gaps = 13/100 (13%)
Query: 10 TEKDVEKRLVTGAKKLDCWVRKASFVGRR---------GCP----DRLIITPNGGLWWIE 56
TE ++ ++ K V + + R G P D P+G +++IE
Sbjct: 3 TESLIQNQIRVELSKAGYTVFRINVGKVRMADGRWFDTGAPKGFCDLFGFRPDGQIFFIE 62
Query: 57 VKKPTGRLSHQQMSEIEELRRRGQRVKVLVSMEEVDNFLE 96
VK GRL Q +E +++RG V V S+E+ ++
Sbjct: 63 VKNEKGRLRDDQKKFMEAMKKRGALVGVARSVEDAMRIVD 102
>gi|260576810|ref|ZP_05844794.1| VRR-NUC domain protein [Rhodobacter sp. SW2]
gi|259020953|gb|EEW24265.1| VRR-NUC domain protein [Rhodobacter sp. SW2]
Length = 130
Score = 45.5 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 15/64 (23%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Query: 38 RGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLVSMEEVDNFLEE 97
G D ++I +G + ++E+K P GRL Q + + + +G ++ S+++ L +
Sbjct: 57 AGFADLMVIC-DGRILFLELKSPKGRLRPDQEAFRDGVLAQGFGWALVRSLDDALGALAD 115
Query: 98 LACT 101
T
Sbjct: 116 HGFT 119
>gi|9885253|emb|CAC04165.1| hypothetical protein [Lactococcus phage phi31]
Length = 103
Score = 45.1 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 23/101 (22%), Positives = 44/101 (43%), Gaps = 13/101 (12%)
Query: 9 QTEKDVEKRLVTGAKKLDCWVRKA------SFVGR---RGCP----DRLIITPNGGLWWI 55
++E D++ + K C + + GR G P D P+G +++I
Sbjct: 2 RSEHDIQNEIRLALTKAGCVAFRCNVGCVQTIDGRWFDTGLPKGHADLYGFRPDGQVFYI 61
Query: 56 EVKKPTGRLSHQQMSEIEELRRRGQRVKVLVSMEEVDNFLE 96
EVK GR+ Q++ +E +R+ G + S+E+ +
Sbjct: 62 EVKSEIGRVRPDQINFLETMRKNGALAGIARSVEDAMKIIN 102
>gi|312901375|ref|ZP_07760655.1| VRR-NUC domain protein [Enterococcus faecalis TX0470]
gi|311291538|gb|EFQ70094.1| VRR-NUC domain protein [Enterococcus faecalis TX0470]
Length = 97
Score = 45.1 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 26/91 (28%), Positives = 43/91 (47%), Gaps = 4/91 (4%)
Query: 10 TEKDVEKRLVTGAKKLDCWVRKA--SFVGRRGCPDRLIITPNGGLWWIEVKKP-TGRLSH 66
EK VE ++ L + K S G PD ++ NG IEVK+P G +S
Sbjct: 4 PEKKVENQIKKYLDSLGAYYLKVHGSMYQPAGTPD-VLACVNGYFVAIEVKRPNGGVVSA 62
Query: 67 QQMSEIEELRRRGQRVKVLVSMEEVDNFLEE 97
Q S+++ + + G V S+++V L++
Sbjct: 63 LQKSKLKRIEQAGGISIVARSVDDVSTMLKQ 93
>gi|332143320|ref|YP_004429058.1| DNA polymerase III, epsilon subunit [Alteromonas macleodii str.
'Deep ecotype']
gi|327553342|gb|AEB00061.1| DNA polymerase III, epsilon subunit [Alteromonas macleodii str.
'Deep ecotype']
Length = 715
Score = 44.7 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Query: 37 RRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKV 84
R G PD +++ + L + E+K P +L Q+ I+ L++ G V V
Sbjct: 485 RDGFPDIMVL--DDSLRFEEIKAPGDQLRRNQLVSIQRLQQAGFDVAV 530
>gi|94501331|ref|ZP_01307852.1| hypothetical protein RED65_02924 [Oceanobacter sp. RED65]
gi|94426602|gb|EAT11589.1| hypothetical protein RED65_02924 [Oceanobacter sp. RED65]
Length = 738
Score = 44.7 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 38 RGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKV 84
G PD +II NG + + E+K P +L Q+ ++ L+R G V+V
Sbjct: 515 DGYPDLMIIDDNG-IRFEEIKAPGDQLRRNQLISLQSLKRNGFDVRV 560
>gi|149910747|ref|ZP_01899382.1| hypothetical protein PE36_00175 [Moritella sp. PE36]
gi|149806187|gb|EDM66166.1| hypothetical protein PE36_00175 [Moritella sp. PE36]
Length = 113
Score = 44.3 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 31/59 (52%)
Query: 38 RGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLVSMEEVDNFLE 96
RG D + +T NG IEVK PTGR+S Q ++ + G V+ S+++V L
Sbjct: 46 RGTADIIGMTCNGKFLAIEVKTPTGRISDHQRMWLKRVAMHGGLAAVVRSIDDVKASLN 104
>gi|254441219|ref|ZP_05054712.1| VRR-NUC domain superfamily [Octadecabacter antarcticus 307]
gi|198251297|gb|EDY75612.1| VRR-NUC domain superfamily [Octadecabacter antarcticus 307]
Length = 138
Score = 44.3 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Query: 38 RGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLVSMEEVDNFLEE 97
G D LII +G + ++E+K P GRL Q + + + +G ++ S+++ L +
Sbjct: 64 AGFADLLIIC-DGRVLFLELKAPKGRLRSAQEAFRDAVFSQGFGWALVRSLDDALGALAD 122
Query: 98 LACT 101
T
Sbjct: 123 HGFT 126
>gi|167462181|ref|ZP_02327270.1| hypothetical protein Plarl_06425 [Paenibacillus larvae subsp.
larvae BRL-230010]
Length = 115
Score = 44.3 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 22/97 (22%), Positives = 33/97 (34%), Gaps = 6/97 (6%)
Query: 9 QTEKDVEKRLVTGAKKLDCWVRKASFVG---RRGCPDRLIITPNGGLWWIEVKKPTGRLS 65
E +K++ + G R G PD ++ G IE+K TGR S
Sbjct: 1 MKEAQFQKKVTNFLNAQPDIWYVKVWGGGYQRAGIPD-ILCCAKGHFIAIELKSETGRTS 59
Query: 66 HQQMSEIEELRRRGQRVKVL--VSMEEVDNFLEELAC 100
Q + + G VL E F+ E+
Sbjct: 60 KLQDYNLNRISESGGMTIVLRPSEFEAFKRFIREVTG 96
>gi|109898663|ref|YP_661918.1| DNA polymerase III, epsilon subunit [Pseudoalteromonas atlantica
T6c]
gi|109700944|gb|ABG40864.1| DNA polymerase III, epsilon subunit [Pseudoalteromonas atlantica
T6c]
Length = 769
Score = 44.3 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 21/72 (29%), Positives = 29/72 (40%), Gaps = 9/72 (12%)
Query: 13 DVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEI 72
V L AK + G PD ++I N L + EVK P +L Q+ I
Sbjct: 529 WVADHLRAMAKNYQGL--------KDGYPDLMVI-ENQQLRFEEVKAPGDQLRANQLVSI 579
Query: 73 EELRRRGQRVKV 84
+ L+ G V V
Sbjct: 580 DALQNAGFNVGV 591
>gi|167758218|ref|ZP_02430345.1| hypothetical protein CLOSCI_00556 [Clostridium scindens ATCC 35704]
gi|167664115|gb|EDS08245.1| hypothetical protein CLOSCI_00556 [Clostridium scindens ATCC 35704]
Length = 159
Score = 44.3 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 41/92 (44%), Gaps = 3/92 (3%)
Query: 8 YQTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGL--WWIEVKKPTGRLS 65
+ E + + K+ + V KA+ + + G PD + P GG +IE+K +G+ +
Sbjct: 22 FIPELRLLHHVPNEGKRTNGAVLKAAGL-KTGVPDLSLPVPRGGFHGLYIEMKFGSGKTT 80
Query: 66 HQQMSEIEELRRRGQRVKVLVSMEEVDNFLEE 97
Q + LR++G + V E+ +
Sbjct: 81 KAQEEFMALLRQQGYKTAVAYGAEQAREIIRH 112
>gi|329117681|ref|ZP_08246398.1| VRR-NUC domain protein [Streptococcus parauberis NCFD 2020]
gi|326908086|gb|EGE55000.1| VRR-NUC domain protein [Streptococcus parauberis NCFD 2020]
Length = 115
Score = 43.9 bits (103), Expect = 0.007, Method: Composition-based stats.
Identities = 21/102 (20%), Positives = 43/102 (42%), Gaps = 13/102 (12%)
Query: 9 QTEKDVEKRLVTGAKKLDCWVRK-------------ASFVGRRGCPDRLIITPNGGLWWI 55
++E D++ + KL + S +G PD +G +++I
Sbjct: 7 KSEHDIQSLIRLELTKLGIPCFRINVGKVKMKDGRWFSTGAPKGFPDLFGYRQDGQIFFI 66
Query: 56 EVKKPTGRLSHQQMSEIEELRRRGQRVKVLVSMEEVDNFLEE 97
EVK GR+ +Q + ++ + +G V S+E+ +E+
Sbjct: 67 EVKDNKGRVRPEQENFMKVAKSKGALAGVARSVEDALEIIED 108
>gi|289167299|ref|YP_003445566.1| hypothetical protein smi_0426 [Streptococcus mitis B6]
gi|288906864|emb|CBJ21698.1| conserved hypothetical protein [Streptococcus mitis B6]
Length = 102
Score = 43.9 bits (103), Expect = 0.007, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 48 PNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLVSMEEVDNFLE 96
P+G ++++EVKK GR+ +Q + IE +R+RG V S +E ++
Sbjct: 54 PDGQIFYVEVKKENGRVRPEQENFIETVRKRGAIAGVARSAQEALELVK 102
>gi|260911995|ref|ZP_05918558.1| conserved hypothetical protein [Prevotella sp. oral taxon 472 str.
F0295]
gi|260633873|gb|EEX52000.1| conserved hypothetical protein [Prevotella sp. oral taxon 472 str.
F0295]
Length = 115
Score = 43.6 bits (102), Expect = 0.009, Method: Composition-based stats.
Identities = 19/68 (27%), Positives = 31/68 (45%), Gaps = 5/68 (7%)
Query: 37 RRGCPDRLIITP--NGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLVSMEEVDNF 94
RRG PD ++ P ++E+K TGR Q +L G + + S+E+ F
Sbjct: 50 RRGFPDLILCFPSKGHHALFVEMKTKTGRQQPSQKIMQRQLEWAGYKYAICRSLED---F 106
Query: 95 LEELACTL 102
+ E+ L
Sbjct: 107 INEINDYL 114
>gi|168178707|ref|ZP_02613371.1| VRR-NUC domain superfamily [Clostridium botulinum NCTC 2916]
gi|182671133|gb|EDT83107.1| VRR-NUC domain superfamily [Clostridium botulinum NCTC 2916]
Length = 98
Score = 43.6 bits (102), Expect = 0.009, Method: Composition-based stats.
Identities = 20/82 (24%), Positives = 31/82 (37%), Gaps = 4/82 (4%)
Query: 11 EKDVEKRLVTGAKKL-DCWVRK-ASFV-GRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQ 67
EK E + L W K + + G PD +I +G IEVK P G+ S
Sbjct: 4 EKKFENEIKKFLSDLPHTWFFKYWAGPYSKSGIPD-IIACVDGHFVGIEVKAPNGKPSEL 62
Query: 68 QMSEIEELRRRGQRVKVLVSME 89
Q + ++ +L +
Sbjct: 63 QKRNVRLIQECRGLGYILYPKD 84
>gi|260063424|ref|YP_003196504.1| hypothetical protein RB2501_01410 [Robiginitalea biformata
HTCC2501]
gi|88782868|gb|EAR14042.1| hypothetical protein RB2501_01410 [Robiginitalea biformata
HTCC2501]
Length = 84
Score = 43.6 bits (102), Expect = 0.010, Method: Composition-based stats.
Identities = 15/58 (25%), Positives = 26/58 (44%)
Query: 39 GCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLVSMEEVDNFLE 96
G D + + P G IE+K G S +Q++ + G R V+ S++E+
Sbjct: 23 GVSDMIYLKPGGRPLLIEIKTMRGTQSPKQVAWQARVVANGYRYYVVRSLDEMKEICG 80
>gi|313621717|gb|EFR92473.1| hypothetical protein NT06LI_3335 [Listeria innocua FSL J1-023]
Length = 48
Score = 43.6 bits (102), Expect = 0.010, Method: Composition-based stats.
Identities = 10/46 (21%), Positives = 18/46 (39%)
Query: 56 EVKKPTGRLSHQQMSEIEELRRRGQRVKVLVSMEEVDNFLEELACT 101
E K P L Q ++ +G + + E+VDN + +
Sbjct: 2 ETKAPKKELRKLQEKRKAQIEAQGLLHYAVDTKEQVDNLMSHFGAS 47
>gi|121586132|ref|ZP_01675924.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
gi|153802909|ref|ZP_01957495.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
gi|121549798|gb|EAX59820.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
gi|124121574|gb|EAY40317.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
Length = 183
Score = 43.2 bits (101), Expect = 0.010, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 37 RRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRR-RGQRVKVLVSMEE 90
G PD + +G + ++EVKK + RLS Q+ + +++ G V V+ EE
Sbjct: 105 TSGEPDLFLYKDDGSVLFVEVKKESDRLSKSQLVCLSQIKSILGCDVAVVYLSEE 159
>gi|76788419|ref|YP_329253.1| hypothetical protein SAK_0621 [Streptococcus agalactiae A909]
gi|76799184|ref|ZP_00781364.1| gp106 [Streptococcus agalactiae 18RS21]
gi|76563476|gb|ABA46060.1| conserved hypothetical protein [Streptococcus agalactiae A909]
gi|76585460|gb|EAO62038.1| gp106 [Streptococcus agalactiae 18RS21]
Length = 93
Score = 43.2 bits (101), Expect = 0.011, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
Query: 19 VTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRR 78
V K D +G D PNG +++IEVK TGR+ +Q + +E + +
Sbjct: 15 VGKVKTADGRFFDTGLP--KGFCDLFGFKPNGQIFFIEVKNETGRIRPEQKNFMEVMASK 72
Query: 79 GQRVKVLVSMEEVDNFLE 96
G V S+E+ +
Sbjct: 73 GALAGVARSVEDALKIVN 90
>gi|308048398|ref|YP_003911964.1| VRR-NUC domain protein [Ferrimonas balearica DSM 9799]
gi|307630588|gb|ADN74890.1| VRR-NUC domain protein [Ferrimonas balearica DSM 9799]
Length = 546
Score = 43.2 bits (101), Expect = 0.011, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Query: 37 RRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLV 86
R G PD +++ G L +EVK P L Q + EL R G +VL
Sbjct: 489 RSGQPDLMVV-DKGALTLVEVKGPGDSLRDHQRRWLAELDRLGVASRVLW 537
>gi|325292909|ref|YP_004278773.1| hypothetical protein AGROH133_06209 [Agrobacterium sp. H13-3]
gi|325060762|gb|ADY64453.1| hypothetical protein AGROH133_06209 [Agrobacterium sp. H13-3]
Length = 157
Score = 43.2 bits (101), Expect = 0.012, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 21/49 (42%)
Query: 37 RRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVL 85
G D I G L IE K GRLS Q+ L R G V+V+
Sbjct: 81 TPGEADLRIYLKGGKLRMIENKVGKGRLSPAQVERHASLARLGHPVEVV 129
>gi|332173709|gb|AEE22963.1| DNA polymerase III, epsilon subunit [Glaciecola agarilytica
4H-3-7+YE-5]
Length = 788
Score = 43.2 bits (101), Expect = 0.012, Method: Composition-based stats.
Identities = 19/68 (27%), Positives = 28/68 (41%), Gaps = 9/68 (13%)
Query: 17 RLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELR 76
L AK + G PD ++I + L + EVK P +L Q+ I+ L+
Sbjct: 552 HLRAMAKNYQGL--------KDGYPDLMVI-EHQQLRFEEVKAPGDQLRANQLVSIDALQ 602
Query: 77 RRGQRVKV 84
G V V
Sbjct: 603 NAGFNVGV 610
>gi|323493387|ref|ZP_08098509.1| hypothetical protein VIBR0546_13740 [Vibrio brasiliensis LMG 20546]
gi|323312210|gb|EGA65352.1| hypothetical protein VIBR0546_13740 [Vibrio brasiliensis LMG 20546]
Length = 537
Score = 43.2 bits (101), Expect = 0.012, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Query: 37 RRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLV 86
R G PD LI+ +G W+EVK P +L Q I +R V
Sbjct: 485 RNGMPD-LILFKDGEFEWVEVKGPGDKLQDNQWRWISHFKRLKVPFSVAY 533
>gi|313885426|ref|ZP_07819176.1| conserved hypothetical protein [Eremococcus coleocola
ACS-139-V-Col8]
gi|312619156|gb|EFR30595.1| conserved hypothetical protein [Eremococcus coleocola
ACS-139-V-Col8]
Length = 66
Score = 43.2 bits (101), Expect = 0.013, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Query: 38 RGCPDRLIITPNGGLWWIEVKKP-TGRLSHQQMSEIEELRRRGQRVKVLVSMEEVDNFLE 96
G PD ++ G IEVKKP G +S Q +I++++ G V S+E V L
Sbjct: 3 AGTPD-ILACLKGRFIGIEVKKPKGGIVSPLQKLKIKQIQNAGGIAFVANSLEVVKRELS 61
Query: 97 E 97
E
Sbjct: 62 E 62
>gi|160932560|ref|ZP_02079950.1| hypothetical protein CLOLEP_01398 [Clostridium leptum DSM 753]
gi|156868519|gb|EDO61891.1| hypothetical protein CLOLEP_01398 [Clostridium leptum DSM 753]
Length = 96
Score = 43.2 bits (101), Expect = 0.013, Method: Composition-based stats.
Identities = 20/97 (20%), Positives = 36/97 (37%), Gaps = 6/97 (6%)
Query: 9 QTEKDVEKRLVTGAKKL--DCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKP-TGRLS 65
E + +L+ KKL C V K+ +G PD LI+ N +E K+ +
Sbjct: 1 MLESQFQSKLIKELKKLFPGCIVMKSDSGYLQGIPDLLILF-NDKWAALECKQHAGAKKQ 59
Query: 66 HQQMSEIEELRRRGQRVKVLVSMEEVDNFLEELACTL 102
Q + ++ + E + L +L +
Sbjct: 60 PNQEYYVGKMDEMSFSRFIC--PENKEEVLHDLQQSF 94
>gi|146341316|ref|YP_001206364.1| DNA-directed DNA polymerase [Bradyrhizobium sp. ORS278]
gi|146194122|emb|CAL78141.1| hypothetical protein; putative DNA-directed DNA polymerase
[Bradyrhizobium sp. ORS278]
Length = 737
Score = 43.2 bits (101), Expect = 0.013, Method: Composition-based stats.
Identities = 12/48 (25%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 37 RRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKV 84
R G PD L+ +G + ++EVK + Q++ + +L + G ++
Sbjct: 504 RDGFPD-LMQVRDGKVTFVEVKAEGDAIRRNQLTRLRQLEQAGIPAEI 550
>gi|329847967|ref|ZP_08262995.1| exonuclease, DNA polymerase III, epsilon subunit family domain
protein [Asticcacaulis biprosthecum C19]
gi|328843030|gb|EGF92599.1| exonuclease, DNA polymerase III, epsilon subunit family domain
protein [Asticcacaulis biprosthecum C19]
Length = 708
Score = 42.8 bits (100), Expect = 0.017, Method: Composition-based stats.
Identities = 12/49 (24%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 37 RRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVL 85
R G PD L++T + ++E+K ++ Q++ ++ L+ G +L
Sbjct: 484 RDGFPD-LMLTRADEVRFVEIKAEGDQIRRHQLARLKLLQEAGFDASIL 531
>gi|313499142|gb|ADR60508.1| VRR-NUC domain-containing protein [Pseudomonas putida BIRD-1]
Length = 549
Score = 42.8 bits (100), Expect = 0.017, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Query: 36 GRRGCPDRLIITPN-GGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKV 84
R G PD + P G +EVK P RL Q+ +E R+ G V V
Sbjct: 491 NRTGMPDLIQFWPEQGRYRMVEVKGPGDRLQDNQLRWLEFCRQHGLPVAV 540
>gi|148548065|ref|YP_001268167.1| VRR-NUC domain-containing protein [Pseudomonas putida F1]
gi|148512123|gb|ABQ78983.1| VRR-NUC domain protein [Pseudomonas putida F1]
Length = 549
Score = 42.8 bits (100), Expect = 0.017, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Query: 36 GRRGCPDRLIITPN-GGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKV 84
R G PD + P G +EVK P RL Q+ +E R+ G V V
Sbjct: 491 NRTGMPDLIQFWPEQGRYRMVEVKGPGDRLQDNQLRWLEFCRQHGLPVAV 540
>gi|298682364|gb|ADI95425.1| VRR-NUC domain-containing protein [Pseudomonas putida]
Length = 497
Score = 42.4 bits (99), Expect = 0.019, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Query: 36 GRRGCPDRLIITPN-GGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKV 84
R G PD + P G +EVK P RL Q+ +E R+ G V V
Sbjct: 439 NRTGMPDLIQFWPEQGRYRMVEVKGPGDRLQDNQLRWLEFCRQHGLPVAV 488
>gi|239834262|ref|ZP_04682590.1| p103 [Ochrobactrum intermedium LMG 3301]
gi|239822325|gb|EEQ93894.1| p103 [Ochrobactrum intermedium LMG 3301]
Length = 170
Score = 42.4 bits (99), Expect = 0.019, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 21/48 (43%)
Query: 38 RGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVL 85
G PD I G L IE K GRLS Q L+R G V V+
Sbjct: 94 SGEPDLRIYGEYGRLLMIENKVGQGRLSPAQKDRHAALQRLGYTVLVI 141
>gi|315650311|ref|ZP_07903383.1| VRR-NUC domain protein [Eubacterium saburreum DSM 3986]
gi|315487422|gb|EFU77732.1| VRR-NUC domain protein [Eubacterium saburreum DSM 3986]
Length = 160
Score = 42.4 bits (99), Expect = 0.020, Method: Composition-based stats.
Identities = 26/96 (27%), Positives = 42/96 (43%), Gaps = 6/96 (6%)
Query: 7 HYQTEKDVEKRLVTGAKKL--DCWVRKASFV--GRRGCPDRLIITPNGGLWWIEVKKP-T 61
H E +K+++ K V K + G PD + G + E+K+P
Sbjct: 60 HMPKESYFQKQIMDWINKNIPGAAVWKEAAGPYSVSGIPD-ITCIIRGLYYGFEIKRPFI 118
Query: 62 GRLSHQQMSEIEELRRRGQRVKVLVSMEEVDNFLEE 97
GRLS Q I+ + G R V+ S++EV L++
Sbjct: 119 GRLSKIQKETIDRINESGGRAYVVTSVKEVAEILKD 154
>gi|269961106|ref|ZP_06175474.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269834057|gb|EEZ88148.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 538
Score = 42.4 bits (99), Expect = 0.021, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Query: 37 RRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLV 86
R G PD LI +G WIEVK P +L Q I+E R V
Sbjct: 485 RNGMPD-LIAFKDGKFEWIEVKGPGDKLQDNQWRWIKEFNRLNVPFSVCY 533
>gi|26989557|ref|NP_744982.1| VRR-NUC domain protein [Pseudomonas putida KT2440]
gi|24984434|gb|AAN68446.1|AE016477_5 conserved hypothetical protein [Pseudomonas putida KT2440]
Length = 549
Score = 42.4 bits (99), Expect = 0.022, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Query: 36 GRRGCPDRLIITPN-GGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKV 84
R G PD + P G +EVK P RL Q+ + R+ G V V
Sbjct: 491 NRAGMPDLIQFWPEQGRYRMVEVKGPGDRLQDNQLRWLAFCRQHGLPVAV 540
>gi|58261706|ref|XP_568263.1| hypothetical protein CNM02280 [Cryptococcus neoformans var.
neoformans JEC21]
gi|134118563|ref|XP_772055.1| hypothetical protein CNBM2120 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50254661|gb|EAL17408.1| hypothetical protein CNBM2120 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57230436|gb|AAW46746.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 988
Score = 42.4 bits (99), Expect = 0.022, Method: Composition-based stats.
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 4/66 (6%)
Query: 23 KKLDCWVRKASFVGR---RGCPDRLIITPNGGLW-WIEVKKPTGRLSHQQMSEIEELRRR 78
K L R + R G PD ++ P ++EVK P LS Q I+ L
Sbjct: 829 KALSGVCRMLAEEYRHRASGVPDLIVWNPQTKDARFVEVKGPGDSLSETQKIWIDVLLSS 888
Query: 79 GQRVKV 84
G +V+V
Sbjct: 889 GIQVEV 894
>gi|238749559|ref|ZP_04611064.1| hypothetical protein yrohd0001_28770 [Yersinia rohdei ATCC 43380]
gi|238712214|gb|EEQ04427.1| hypothetical protein yrohd0001_28770 [Yersinia rohdei ATCC 43380]
Length = 178
Score = 42.4 bits (99), Expect = 0.022, Method: Composition-based stats.
Identities = 14/66 (21%), Positives = 29/66 (43%), Gaps = 6/66 (9%)
Query: 37 RRGCPDRLIITPNGGLW--WIEVKKPTGRLSHQQMSEIEELRRRGQ----RVKVLVSMEE 90
R+G PD + P GG WIE+K G+ + Q + ++ G + + + +
Sbjct: 80 RKGVPDLFLALPRGGYAGLWIEMKTLNGKPTPDQNHWLNKMNEIGYLATIKFSCVETAKT 139
Query: 91 VDNFLE 96
+ ++
Sbjct: 140 ITEYIN 145
>gi|71018407|ref|XP_759434.1| hypothetical protein UM03287.1 [Ustilago maydis 521]
gi|46099041|gb|EAK84274.1| hypothetical protein UM03287.1 [Ustilago maydis 521]
Length = 1179
Score = 42.4 bits (99), Expect = 0.023, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Query: 38 RGCPDRLIITPNGGLW-WIEVKKPTGRLSHQQMSEIEELRRRGQRVKV 84
G PD ++ + ++EVK P RLS Q I+ L R G +V V
Sbjct: 1126 SGMPDLVVWRIKDKVVRFVEVKGPGDRLSETQKVWIDVLLRAGIQVHV 1173
>gi|153833312|ref|ZP_01985979.1| VRR-NUC domain family [Vibrio harveyi HY01]
gi|148870448|gb|EDL69369.1| VRR-NUC domain family [Vibrio harveyi HY01]
Length = 538
Score = 42.4 bits (99), Expect = 0.023, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Query: 37 RRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLV 86
R G PD LI +G WIEVK P +L Q I+E R V
Sbjct: 485 RNGMPD-LIAFKDGKFEWIEVKGPGDKLQDNQWRWIKEFNRLNVPFSVCY 533
>gi|312984190|ref|ZP_07791536.1| phage protein [Lactobacillus crispatus CTV-05]
gi|310894409|gb|EFQ43485.1| phage protein [Lactobacillus crispatus CTV-05]
Length = 122
Score = 42.0 bits (98), Expect = 0.026, Method: Composition-based stats.
Identities = 20/85 (23%), Positives = 33/85 (38%), Gaps = 14/85 (16%)
Query: 9 QTEKDVEKRLVTGAKKLDCWVRK------------ASFVGR-RGCPDRL-IITPNGGLWW 54
++E ++ + K C V + G G PD +G +++
Sbjct: 13 KSEHAIQNEIQVALSKHKCSVFRANVGKIRLPDGRFFSTGLPSGFPDLFGFRWTDGKIFF 72
Query: 55 IEVKKPTGRLSHQQMSEIEELRRRG 79
IEVK GRL Q+ + L+R G
Sbjct: 73 IEVKNVKGRLRPDQIVFHKMLQRHG 97
>gi|311110110|ref|ZP_07711507.1| phage protein [Lactobacillus gasseri MV-22]
gi|311065264|gb|EFQ45604.1| phage protein [Lactobacillus gasseri MV-22]
Length = 114
Score = 42.0 bits (98), Expect = 0.028, Method: Composition-based stats.
Identities = 20/102 (19%), Positives = 37/102 (36%), Gaps = 14/102 (13%)
Query: 9 QTEKDVEKRLVTGAKKLDCWVRK------------ASFVGR-RGCPDRL-IITPNGGLWW 54
++E ++ ++ K C V + G G PD +G ++
Sbjct: 3 ESEHSIQSKIQVELSKHHCTVFRANVGKMRTPDGRFFSTGLPSGYPDLSGFRWIDGKAFF 62
Query: 55 IEVKKPTGRLSHQQMSEIEELRRRGQRVKVLVSMEEVDNFLE 96
IEVK TG+ Q+ L G + S+++ +E
Sbjct: 63 IEVKNATGKPREDQIRFHHMLMSHGIIHGIARSVDDARMIVE 104
>gi|156977313|ref|YP_001448219.1| hypothetical protein VIBHAR_06099 [Vibrio harveyi ATCC BAA-1116]
gi|156528907|gb|ABU73992.1| hypothetical protein VIBHAR_06099 [Vibrio harveyi ATCC BAA-1116]
Length = 537
Score = 42.0 bits (98), Expect = 0.028, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Query: 37 RRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLV 86
R G PD LI +G WIEVK P +L Q I+E R V
Sbjct: 485 RNGMPD-LIAFKDGKFEWIEVKGPGDKLQDNQWRWIKEFNRLNVPFSVCY 533
>gi|261251368|ref|ZP_05943942.1| hypothetical protein VIA_001387 [Vibrio orientalis CIP 102891]
gi|260938241|gb|EEX94229.1| hypothetical protein VIA_001387 [Vibrio orientalis CIP 102891]
Length = 537
Score = 41.6 bits (97), Expect = 0.030, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Query: 37 RRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLV 86
R G PD L++ +G W+EVK P +L Q IE+ R V
Sbjct: 485 RNGMPD-LMLFKDGDYHWVEVKGPGDKLQDNQWRWIEQFHRLSVNFSVCY 533
>gi|86139831|ref|ZP_01058397.1| hypothetical protein MED193_12398 [Roseobacter sp. MED193]
gi|85823460|gb|EAQ43669.1| hypothetical protein MED193_12398 [Roseobacter sp. MED193]
Length = 131
Score = 41.6 bits (97), Expect = 0.031, Method: Composition-based stats.
Identities = 17/69 (24%), Positives = 30/69 (43%), Gaps = 4/69 (5%)
Query: 33 SFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLVSMEEVD 92
G D LII G ++E+K GRLS Q + + + +G ++ S+++
Sbjct: 55 VHPGFA---D-LIILCEGKALFLELKSLKGRLSPAQEAFRDAVTAQGFGWALVRSLDDAL 110
Query: 93 NFLEELACT 101
L + T
Sbjct: 111 GALADYGFT 119
>gi|148255092|ref|YP_001239677.1| hypothetical protein BBta_3691 [Bradyrhizobium sp. BTAi1]
gi|146407265|gb|ABQ35771.1| hypothetical protein BBta_3691 [Bradyrhizobium sp. BTAi1]
Length = 720
Score = 41.6 bits (97), Expect = 0.032, Method: Composition-based stats.
Identities = 12/48 (25%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Query: 37 RRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKV 84
R G PD L+ +G + ++EVK + Q++ + +L G ++
Sbjct: 487 RDGFPD-LMHVRDGKVSFVEVKAEGDAIRRNQLTRLRQLEHAGIPAEI 533
>gi|257485315|ref|ZP_05639356.1| hypothetical protein PsyrptA_18773 [Pseudomonas syringae pv. tabaci
ATCC 11528]
Length = 440
Score = 41.6 bits (97), Expect = 0.032, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 30/69 (43%), Gaps = 4/69 (5%)
Query: 36 GRRGCPDRLIITPNGGLW-WIEVKKPTGRLSHQQMSEIEELRRRGQRV---KVLVSMEEV 91
R G PD + P + IEVK P RL Q+ ++ G V V + E
Sbjct: 364 NRTGMPDLIQFFPEQRRYRMIEVKGPGDRLQDNQLRWLDFCAEHGMPVEVCYVQWATEHA 423
Query: 92 DNFLEELAC 100
+ +EELAC
Sbjct: 424 ADVIEELAC 432
>gi|321265299|ref|XP_003197366.1| hypothetical protein CGB_M3340W [Cryptococcus gattii WM276]
gi|317463845|gb|ADV25579.1| Conserved hypothetical protein [Cryptococcus gattii WM276]
Length = 976
Score = 41.6 bits (97), Expect = 0.033, Method: Composition-based stats.
Identities = 24/84 (28%), Positives = 35/84 (41%), Gaps = 4/84 (4%)
Query: 5 SFHYQTEKDVEKRLVTGAKKLDCWVRKASFVGR---RGCPDRLIITPNGGLW-WIEVKKP 60
++ Y+ E E G K L R + R G PD ++ P ++EVK P
Sbjct: 802 NWEYEKEDLEEILECLGGKTLSGVCRMLAEEYRHRASGVPDLIVWNPETKDARFVEVKGP 861
Query: 61 TGRLSHQQMSEIEELRRRGQRVKV 84
LS Q I+ L G +V+V
Sbjct: 862 GDSLSETQKIWIDVLLSTGIQVEV 885
>gi|260770417|ref|ZP_05879350.1| hypothetical protein VFA_003484 [Vibrio furnissii CIP 102972]
gi|260615755|gb|EEX40941.1| hypothetical protein VFA_003484 [Vibrio furnissii CIP 102972]
Length = 538
Score = 41.6 bits (97), Expect = 0.033, Method: Composition-based stats.
Identities = 15/50 (30%), Positives = 21/50 (42%), Gaps = 1/50 (2%)
Query: 37 RRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLV 86
R G PD ++ +G WIEVK P +L Q + + R V
Sbjct: 485 RNGMPDLIVF-KDGQFEWIEVKGPGDKLQDNQWRWMAQFTRLNVPFSVCY 533
>gi|315127113|ref|YP_004069116.1| hypothetical protein PSM_A2044 [Pseudoalteromonas sp. SM9913]
gi|315015627|gb|ADT68965.1| conserved hypothetical protein [Pseudoalteromonas sp. SM9913]
Length = 718
Score = 41.6 bits (97), Expect = 0.033, Method: Composition-based stats.
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Query: 38 RGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRV 82
G PD L+I N + + EVK P +L Q+ I+ L+ G +V
Sbjct: 496 DGYPD-LMIVDNSAVHFEEVKAPGDKLKRNQLVSIDNLKNSGFKV 539
>gi|255282178|ref|ZP_05346733.1| VRR-NUC domain protein [Bryantella formatexigens DSM 14469]
gi|255267126|gb|EET60331.1| VRR-NUC domain protein [Bryantella formatexigens DSM 14469]
Length = 133
Score = 41.6 bits (97), Expect = 0.035, Method: Composition-based stats.
Identities = 25/93 (26%), Positives = 38/93 (40%), Gaps = 6/93 (6%)
Query: 10 TEKDVEKRLVTGAKKLDCWVRKAS----FVGRRGCPDRLIITPNGGLWWIEVKKP-TGRL 64
E + +++ +K+ R+G PD + NG + EVK+P G L
Sbjct: 38 KESYYQDKIIKHIRKIFPLSVVWKEAAGAYSRQGIPDVTAVI-NGRYYGFEVKRPFVGVL 96
Query: 65 SHQQMSEIEELRRRGQRVKVLVSMEEVDNFLEE 97
S Q I+ +R G R V+ EV L E
Sbjct: 97 SKIQEQTIKRIRAAGGRAYVVTYPAEVTELLRE 129
>gi|323499180|ref|ZP_08104158.1| hypothetical protein VISI1226_10972 [Vibrio sinaloensis DSM 21326]
gi|323315813|gb|EGA68846.1| hypothetical protein VISI1226_10972 [Vibrio sinaloensis DSM 21326]
Length = 541
Score = 41.6 bits (97), Expect = 0.035, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Query: 37 RRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLV 86
R G PD LI +G WIEVK P +L Q I++ R V
Sbjct: 485 RNGMPD-LIAFKDGQFEWIEVKGPGDKLQDNQWRWIKQFNRLNVPFAVCY 533
>gi|315181485|gb|ADT88398.1| VRR-NUC domain family [Vibrio furnissii NCTC 11218]
Length = 538
Score = 41.6 bits (97), Expect = 0.036, Method: Composition-based stats.
Identities = 15/50 (30%), Positives = 21/50 (42%), Gaps = 1/50 (2%)
Query: 37 RRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLV 86
R G PD ++ +G WIEVK P +L Q + + R V
Sbjct: 485 RNGMPDLIVF-KDGQFEWIEVKGPGDKLQDNQWRWMAQFTRLNVPFSVCY 533
>gi|330889754|gb|EGH22415.1| hypothetical protein PSYMO_13309 [Pseudomonas syringae pv. mori
str. 301020]
Length = 567
Score = 41.6 bits (97), Expect = 0.038, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 29/69 (42%), Gaps = 4/69 (5%)
Query: 36 GRRGCPDRLIITPNGGLW-WIEVKKPTGRLSHQQMSEIEELRRRGQRV---KVLVSMEEV 91
R G PD + P + IEVK P RL Q+ ++ G V V + E
Sbjct: 491 NRTGMPDLIQFFPEQRRYRMIEVKGPGDRLQDSQLRWLDFCAEHGMPVEVCYVQWATEHA 550
Query: 92 DNFLEELAC 100
+EELAC
Sbjct: 551 AEVIEELAC 559
>gi|254450081|ref|ZP_05063518.1| hypothetical protein OA238_680 [Octadecabacter antarcticus 238]
gi|198264487|gb|EDY88757.1| hypothetical protein OA238_680 [Octadecabacter antarcticus 238]
Length = 129
Score = 41.2 bits (96), Expect = 0.041, Method: Composition-based stats.
Identities = 14/69 (20%), Positives = 29/69 (42%), Gaps = 4/69 (5%)
Query: 33 SFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLVSMEEVD 92
G D ++ +G + ++E+K GRLS Q + + G ++ +M++
Sbjct: 40 VHPGFA---DLIV-LCDGRVLFLELKSLKGRLSPAQEGFRDAVLALGFGWALVRTMDDAL 95
Query: 93 NFLEELACT 101
L + T
Sbjct: 96 GALADHGLT 104
>gi|300772205|ref|ZP_07082075.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC
33861]
gi|300760508|gb|EFK57334.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC
33861]
Length = 118
Score = 41.2 bits (96), Expect = 0.043, Method: Composition-based stats.
Identities = 14/53 (26%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Query: 38 RGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLVSMEE 90
G PD ++ G + E+K +G++S +Q + + G V ++ S EE
Sbjct: 49 AGIPD-CVLIHMGNAYGFEMKTQSGKVSPEQQKVHKVWQDDGTPVYIIRSFEE 100
>gi|167033941|ref|YP_001669172.1| VRR-NUC domain-containing protein [Pseudomonas putida GB-1]
gi|166860429|gb|ABY98836.1| VRR-NUC domain protein [Pseudomonas putida GB-1]
Length = 549
Score = 41.2 bits (96), Expect = 0.044, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Query: 36 GRRGCPDRLIITPNGGLW-WIEVKKPTGRLSHQQMSEIEELRRRGQRVKV 84
R G PD + P GL+ +EVK P RL Q+ +E R+ G V V
Sbjct: 491 NRAGMPDLIQFWPEQGLYRMVEVKGPGDRLQDNQLRWLEFCRQHGLPVAV 540
>gi|289627260|ref|ZP_06460214.1| hypothetical protein PsyrpaN_19339 [Pseudomonas syringae pv.
aesculi str. NCPPB3681]
gi|289650906|ref|ZP_06482249.1| hypothetical protein Psyrpa2_24680 [Pseudomonas syringae pv.
aesculi str. 2250]
gi|330866929|gb|EGH01638.1| hypothetical protein PSYAE_06657 [Pseudomonas syringae pv. aesculi
str. 0893_23]
Length = 567
Score = 41.2 bits (96), Expect = 0.044, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 30/69 (43%), Gaps = 4/69 (5%)
Query: 36 GRRGCPDRLIITPNGGLW-WIEVKKPTGRLSHQQMSEIEELRRRGQRV---KVLVSMEEV 91
R G PD + P + IEVK P RL Q+ ++ G V V + E
Sbjct: 491 NRTGMPDLIQFFPEQRRYRMIEVKGPGDRLQDNQLRWLDFCAEHGMPVEVCYVQWATEHA 550
Query: 92 DNFLEELAC 100
+ +EELAC
Sbjct: 551 ADVIEELAC 559
>gi|330988154|gb|EGH86257.1| hypothetical protein PLA107_24225 [Pseudomonas syringae pv.
lachrymans str. M301315]
gi|331010816|gb|EGH90872.1| hypothetical protein PSYTB_14223 [Pseudomonas syringae pv. tabaci
ATCC 11528]
Length = 567
Score = 41.2 bits (96), Expect = 0.045, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 30/69 (43%), Gaps = 4/69 (5%)
Query: 36 GRRGCPDRLIITPNGGLW-WIEVKKPTGRLSHQQMSEIEELRRRGQRV---KVLVSMEEV 91
R G PD + P + IEVK P RL Q+ ++ G V V + E
Sbjct: 491 NRTGMPDLIQFFPEQRRYRMIEVKGPGDRLQDNQLRWLDFCAEHGMPVEVCYVQWATEHA 550
Query: 92 DNFLEELAC 100
+ +EELAC
Sbjct: 551 ADVIEELAC 559
>gi|298487457|ref|ZP_07005501.1| hypothetical protein PSA3335_2911 [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
gi|298157972|gb|EFH99048.1| hypothetical protein PSA3335_2911 [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
Length = 567
Score = 41.2 bits (96), Expect = 0.045, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 30/69 (43%), Gaps = 4/69 (5%)
Query: 36 GRRGCPDRLIITPNGGLW-WIEVKKPTGRLSHQQMSEIEELRRRGQRV---KVLVSMEEV 91
R G PD + P + IEVK P RL Q+ ++ G V V + E
Sbjct: 491 NRTGMPDLIQFFPEQRRYRMIEVKGPGDRLQDNQLRWLDFCAEHGMPVEVCYVQWATEHA 550
Query: 92 DNFLEELAC 100
+ +EELAC
Sbjct: 551 ADVIEELAC 559
>gi|71734017|ref|YP_275199.1| hypothetical protein PSPPH_3020 [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|71554570|gb|AAZ33781.1| conserved hypothetical protein [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|320328333|gb|EFW84337.1| hypothetical protein PsgRace4_20606 [Pseudomonas syringae pv.
glycinea str. race 4]
gi|330878408|gb|EGH12557.1| hypothetical protein Pgy4_12616 [Pseudomonas syringae pv. glycinea
str. race 4]
Length = 567
Score = 41.2 bits (96), Expect = 0.045, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 30/69 (43%), Gaps = 4/69 (5%)
Query: 36 GRRGCPDRLIITPNGGLW-WIEVKKPTGRLSHQQMSEIEELRRRGQRV---KVLVSMEEV 91
R G PD + P + IEVK P RL Q+ ++ G V V + E
Sbjct: 491 NRTGMPDLIQFFPEQRRYRMIEVKGPGDRLQDNQLRWLDFCAEHGMPVEVCYVQWATEHA 550
Query: 92 DNFLEELAC 100
+ +EELAC
Sbjct: 551 ADVIEELAC 559
>gi|325276310|ref|ZP_08142095.1| VRR-NUC domain-containing protein [Pseudomonas sp. TJI-51]
gi|324098557|gb|EGB96618.1| VRR-NUC domain-containing protein [Pseudomonas sp. TJI-51]
Length = 549
Score = 41.2 bits (96), Expect = 0.046, Method: Composition-based stats.
Identities = 16/50 (32%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Query: 36 GRRGCPDRLIITPN-GGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKV 84
R G PD + P G +EVK P RL Q+ + ++ G V V
Sbjct: 491 NRAGMPDLIQFWPEQGRYRMVEVKGPGDRLQDNQLRWLAFCQQHGLPVAV 540
>gi|192292162|ref|YP_001992767.1| VRR-NUC domain protein [Rhodopseudomonas palustris TIE-1]
gi|192285911|gb|ACF02292.1| VRR-NUC domain protein [Rhodopseudomonas palustris TIE-1]
Length = 161
Score = 41.2 bits (96), Expect = 0.048, Method: Composition-based stats.
Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Query: 36 GRRGCPDRLIITPNGGLWWIEVK-KPTGRLSHQQMSEIEELRRRGQRVKVLVSMEEV 91
G G PD + + ++++E+K GR+S +Q + LR G +V + E
Sbjct: 82 GAAGVPD-IFVMWRKQVYFLEMKKAKGGRVSAEQRVMMARLRGAGAICEVAKGLHEA 137
>gi|260576691|ref|ZP_05844677.1| VRR-NUC domain protein [Rhodobacter sp. SW2]
gi|259021058|gb|EEW24368.1| VRR-NUC domain protein [Rhodobacter sp. SW2]
Length = 131
Score = 41.2 bits (96), Expect = 0.050, Method: Composition-based stats.
Identities = 15/64 (23%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Query: 38 RGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLVSMEEVDNFLEE 97
G D ++I G + ++EVK TGR+ Q + + +G ++ S+++ L +
Sbjct: 57 AGFADLIVIC-GGRVLFLEVKSETGRMRKSQEVFRDTVCAQGFGWALVRSVDDALGALAD 115
Query: 98 LACT 101
T
Sbjct: 116 NGFT 119
>gi|104781734|ref|YP_608232.1| hypothetical protein PSEEN2643 [Pseudomonas entomophila L48]
gi|95110721|emb|CAK15434.1| conserved hypothetical protein [Pseudomonas entomophila L48]
Length = 550
Score = 40.9 bits (95), Expect = 0.052, Method: Composition-based stats.
Identities = 16/50 (32%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Query: 36 GRRGCPDRLIITP-NGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKV 84
R G PD + P G +EVK P RL Q+ ++ + G V V
Sbjct: 491 NRAGMPDLIQFWPAEGRYRMVEVKGPGDRLQDNQLRWLDFCQAHGLPVVV 540
>gi|170722146|ref|YP_001749834.1| VRR-NUC domain-containing protein [Pseudomonas putida W619]
gi|169760149|gb|ACA73465.1| VRR-NUC domain protein [Pseudomonas putida W619]
Length = 549
Score = 40.9 bits (95), Expect = 0.053, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 21/50 (42%), Gaps = 1/50 (2%)
Query: 36 GRRGCPDRLIITPN-GGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKV 84
R G PD + P G +EVK P RL Q+ +E G V V
Sbjct: 491 NRTGMPDLIQFWPEQGRYRMVEVKGPGDRLQDNQLRWLEFCAEHGLPVAV 540
>gi|62327129|ref|YP_223917.1| hypothetical protein phiJL1_ORF114 [Lactobacillus phage phiJL-1]
gi|37930146|gb|AAP74544.1| putative protein [Lactobacillus phage phiJL-1]
Length = 114
Score = 40.9 bits (95), Expect = 0.061, Method: Composition-based stats.
Identities = 22/80 (27%), Positives = 32/80 (40%), Gaps = 3/80 (3%)
Query: 19 VTGAKKLDCWVRKASFVGRRGCPDRLIITP-NGGLWWIEVKKPTGRLSHQQMSEIEELRR 77
V K D G PD + P NG +++IEVK P GR Q++ LR
Sbjct: 30 VGKVKTADGRWFDTGLP--TGFPDLIGYKPDNGRIFFIEVKTPIGRRRKDQVNFANGLRD 87
Query: 78 RGQRVKVLVSMEEVDNFLEE 97
+ V S +E + +
Sbjct: 88 KNVIYGVARSAKEAVTIVRD 107
>gi|315180272|gb|ADT87186.1| hypothetical protein vfu_A02035 [Vibrio furnissii NCTC 11218]
Length = 183
Score = 40.9 bits (95), Expect = 0.062, Method: Composition-based stats.
Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Query: 37 RRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRR-RGQRVKVLVSMEE 90
G PD + +G + ++EVKK + RLS Q+ + +++ V V EE
Sbjct: 105 TAGEPDLFLYKDDGSVLFVEVKKQSDRLSPSQLVCLAQIKSILNCDVGVAYLAEE 159
>gi|134300454|ref|YP_001113950.1| hypothetical protein Dred_2615 [Desulfotomaculum reducens MI-1]
gi|134053154|gb|ABO51125.1| conserved hypothetical protein [Desulfotomaculum reducens MI-1]
Length = 121
Score = 40.9 bits (95), Expect = 0.064, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 29/58 (50%)
Query: 39 GCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLVSMEEVDNFLE 96
G D +T NG ++EVK TGRL +Q + ++ +R+ G V S E+ +
Sbjct: 59 GFSDLFGVTENGKAVFVEVKSATGRLRQEQENFLKRMRQMGAYAGVARSPEDAERIFR 116
>gi|163801611|ref|ZP_02195509.1| hypothetical protein 1103602000597_AND4_09162 [Vibrio sp. AND4]
gi|159174528|gb|EDP59330.1| hypothetical protein AND4_09162 [Vibrio sp. AND4]
Length = 538
Score = 40.5 bits (94), Expect = 0.068, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Query: 37 RRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLV 86
R G PD LI +G WIEVK P +L Q I+E R V
Sbjct: 485 RNGMPD-LIAFKDGEFEWIEVKGPGDKLQDNQWRWIKEFNRLNVPFSVCY 533
>gi|191637877|ref|YP_001987043.1| Orf106 gp [Lactobacillus casei BL23]
gi|190712179|emb|CAQ66185.1| Orf106 gp [Lactobacillus casei BL23]
gi|327381946|gb|AEA53422.1| hypothetical protein LC2W_1088 [Lactobacillus casei LC2W]
gi|327385106|gb|AEA56580.1| hypothetical protein LCBD_1082 [Lactobacillus casei BD-II]
Length = 104
Score = 40.5 bits (94), Expect = 0.069, Method: Composition-based stats.
Identities = 23/101 (22%), Positives = 36/101 (35%), Gaps = 14/101 (13%)
Query: 11 EKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLII------TPN--------GGLWWIE 56
E ++ + C + + + + R+ I P+ G L +E
Sbjct: 4 EAKIQNDIRVALSAHGCTIIRTNSGSVKTVDGRMFIAGPPKGWPDLTGFRHSDGRLILVE 63
Query: 57 VKKPTGRLSHQQMSEIEELRRRGQRVKVLVSMEEVDNFLEE 97
VK TGRL Q E ++R V S EE +EE
Sbjct: 64 VKNETGRLRPDQKRFAEFIQRFPVIYGVCRSAEEAIKLIEE 104
>gi|119774803|ref|YP_927543.1| hypothetical protein Sama_1667 [Shewanella amazonensis SB2B]
gi|119767303|gb|ABL99873.1| conserved hypothetical protein [Shewanella amazonensis SB2B]
Length = 600
Score = 40.5 bits (94), Expect = 0.080, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 37 RRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQM 69
R G PD L++ +G L ++EVK P RL+ Q
Sbjct: 530 RSGFPD-LVLIRDGQLAFVEVKGPGDRLADHQK 561
>gi|289706284|ref|ZP_06502646.1| VRR-NUC domain protein [Micrococcus luteus SK58]
gi|289557007|gb|EFD50336.1| VRR-NUC domain protein [Micrococcus luteus SK58]
Length = 93
Score = 40.5 bits (94), Expect = 0.083, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 33/78 (42%), Gaps = 3/78 (3%)
Query: 9 QTEKDVEKRLVTGAKKLDCWVRKA--SFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSH 66
E D ++++ A+ L V S RG PD L++ G + + E+K GR +
Sbjct: 1 MREDDFQRQVEGLAESLGWKVYHTHDSRRSHRGWPD-LVLGRRGRVLFRELKTMKGRTTP 59
Query: 67 QQMSEIEELRRRGQRVKV 84
Q +E L G V
Sbjct: 60 DQKQWLELLNAAGHDAAV 77
>gi|229119307|ref|ZP_04248610.1| hypothetical protein bcere0017_55420 [Bacillus cereus Rock1-3]
gi|228664173|gb|EEL19711.1| hypothetical protein bcere0017_55420 [Bacillus cereus Rock1-3]
Length = 93
Score = 40.1 bits (93), Expect = 0.095, Method: Composition-based stats.
Identities = 18/84 (21%), Positives = 34/84 (40%), Gaps = 4/84 (4%)
Query: 9 QTEKDVEKRLVTGAKKLDCWVRKASFVGR---RGCPDRLIITPNGGLWWIEVKKPTGRLS 65
E +K+++ K+ D W K + G PD ++ + IE+K G S
Sbjct: 1 MRESAFQKQVIKFLKEQDVWHIKYWAGSQYTKEGIPD-ILACIDSVFHGIELKTDVGVPS 59
Query: 66 HQQMSEIEELRRRGQRVKVLVSME 89
Q+ I +++ G +L +
Sbjct: 60 KLQLYNIRKIKDSGGEAYILRPKD 83
>gi|254507913|ref|ZP_05120042.1| VRR-NUC domain family protein [Vibrio parahaemolyticus 16]
gi|219549149|gb|EED26145.1| VRR-NUC domain family protein [Vibrio parahaemolyticus 16]
Length = 536
Score = 40.1 bits (93), Expect = 0.095, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 21/50 (42%), Gaps = 1/50 (2%)
Query: 37 RRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLV 86
R G PD LI +G WIEVK P +L Q +E R V
Sbjct: 485 RSGMPD-LIAFKDGTFEWIEVKGPGDKLQDNQWRWFKEFERLDVPFSVCY 533
>gi|54303111|ref|YP_133104.1| hypothetical protein PBPRB1438 [Photobacterium profundum SS9]
gi|46916539|emb|CAG23304.1| hypothetical protein PBPRB1438 [Photobacterium profundum SS9]
Length = 120
Score = 40.1 bits (93), Expect = 0.097, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 32/60 (53%)
Query: 38 RGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLVSMEEVDNFLEE 97
+G D + T NG +EVK G++S +Q+ IE++R+ G + S +E D + E
Sbjct: 44 KGSSDLIGWTTNGIFLAVEVKTLNGKVSPEQIKFIEDVRKHGGIAFIATSRDEFDRLMTE 103
>gi|330505342|ref|YP_004382211.1| hypothetical protein MDS_4428 [Pseudomonas mendocina NK-01]
gi|328919628|gb|AEB60459.1| hypothetical protein MDS_4428 [Pseudomonas mendocina NK-01]
Length = 543
Score = 40.1 bits (93), Expect = 0.10, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 19/53 (35%), Gaps = 1/53 (1%)
Query: 35 VGRRGCPDRLIITP-NGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLV 86
R G PD + P G IEVK P RL Q + G V V
Sbjct: 486 ENRAGMPDLIQFWPSEGRYRMIEVKGPGDRLQDNQKRWLAFCAEHGMPVSVCY 538
>gi|241894875|ref|ZP_04782171.1| phage protein [Weissella paramesenteroides ATCC 33313]
gi|241871883|gb|EER75634.1| phage protein [Weissella paramesenteroides ATCC 33313]
Length = 112
Score = 40.1 bits (93), Expect = 0.11, Method: Composition-based stats.
Identities = 23/103 (22%), Positives = 39/103 (37%), Gaps = 14/103 (13%)
Query: 9 QTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIIT--PNGG------------LWW 54
E+D++ + + V + + DR +T PNG +++
Sbjct: 1 MREQDIQNAIRAAVEHDGHVVFRINTGKVLTKDDRWFMTGVPNGHPDLYGFRKTDNQVFY 60
Query: 55 IEVKKPTGRLSHQQMSEIEELRRRGQRVKVLVSMEEVDNFLEE 97
IEVK TGR Q+ + L RG + S E+ + E
Sbjct: 61 IEVKTATGRPRKDQIFFHQALSNRGVIHGIARSSEDALKIINE 103
>gi|254452931|ref|ZP_05066368.1| VRR-NUC domain family [Octadecabacter antarcticus 238]
gi|198267337|gb|EDY91607.1| VRR-NUC domain family [Octadecabacter antarcticus 238]
Length = 150
Score = 40.1 bits (93), Expect = 0.11, Method: Composition-based stats.
Identities = 14/67 (20%), Positives = 28/67 (41%), Gaps = 4/67 (5%)
Query: 33 SFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLVSMEEVD 92
G LI+ +G + ++E+K GRLS Q + + G ++ +M++
Sbjct: 55 VHPGFAD----LIVLCDGRVLFLELKSLKGRLSPAQEGFRDAVLALGFGWALVRTMDDAL 110
Query: 93 NFLEELA 99
L +
Sbjct: 111 GALADYG 117
>gi|149410836|ref|XP_001509834.1| PREDICTED: similar to KIAA1018 protein [Ornithorhynchus anatinus]
Length = 1036
Score = 39.7 bits (92), Expect = 0.14, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 25 LDCWVRKASFVGRR---GCPDRLII-TPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQ 80
L RK R G PD ++ T + +EVK P RLSH+QM ++EL++ G
Sbjct: 959 LSGVCRKLVTDLRHCRGGLPDLVVWNTQDKRFKLVEVKGPNDRLSHKQMIWLDELQKLGA 1018
Query: 81 RVKV 84
V+V
Sbjct: 1019 EVEV 1022
>gi|315038324|ref|YP_004031892.1| hypothetical protein LA2_05690 [Lactobacillus amylovorus GRL 1112]
gi|312276457|gb|ADQ59097.1| hypothetical protein LA2_05690 [Lactobacillus amylovorus GRL 1112]
Length = 139
Score = 39.7 bits (92), Expect = 0.14, Method: Composition-based stats.
Identities = 17/79 (21%), Positives = 33/79 (41%), Gaps = 8/79 (10%)
Query: 22 AKKLDCWVRKASFVGRRGCPDRL-IITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQ 80
K K G PD + + +++IEVK P GR+ Q++ ++L
Sbjct: 52 IKTQSGSYFKGV---ENGTPDLIGYRWRDKQIFFIEVKAPKGRIRPDQLAYHQDL--MHH 106
Query: 81 RVK--VLVSMEEVDNFLEE 97
V + S+++ ++E
Sbjct: 107 NVIHGIARSVDDALKIIDE 125
>gi|89075882|ref|ZP_01162261.1| hypothetical protein SKA34_07458 [Photobacterium sp. SKA34]
gi|89048411|gb|EAR53988.1| hypothetical protein SKA34_07458 [Photobacterium sp. SKA34]
Length = 552
Score = 39.7 bits (92), Expect = 0.14, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Query: 37 RRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLV 86
R G PD LI+ N G W+EVK P +L Q+ + + G V
Sbjct: 495 RSGMPD-LIMFNNTGYQWVEVKGPGDKLQDHQLRWLAFFDQHGIPAHVAY 543
>gi|296203919|ref|XP_002749127.1| PREDICTED: coiled-coil domain-containing protein MTMR15-like
[Callithrix jacchus]
Length = 1166
Score = 39.3 bits (91), Expect = 0.16, Method: Composition-based stats.
Identities = 21/49 (42%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Query: 37 RRGCPDRLII-TPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKV 84
R G PD ++ TP+ +EVK P+ RLSH+QM ++EL++ G V+V
Sbjct: 1104 RGGLPDLVVWNTPSHRCKLVEVKGPSDRLSHKQMIWLDELQKLGAEVEV 1152
>gi|290891512|ref|ZP_06554570.1| hypothetical protein AWRIB429_1960 [Oenococcus oeni AWRIB429]
gi|290478861|gb|EFD87527.1| hypothetical protein AWRIB429_1960 [Oenococcus oeni AWRIB429]
Length = 118
Score = 39.3 bits (91), Expect = 0.17, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 33/85 (38%), Gaps = 14/85 (16%)
Query: 9 QTEKDVEKRLVTGAKKLDCWVRKASF------------VGR-RGCPDRLIITP-NGGLWW 54
+E ++ + K V + + G G PD P + +++
Sbjct: 1 MSEHSIQDDVRVALSKYGYKVFRTAAGKIKMLAGGYFDPGMPNGWPDLTGFNPVDHTIFF 60
Query: 55 IEVKKPTGRLSHQQMSEIEELRRRG 79
IE+K P G+ Q++ + L++ G
Sbjct: 61 IEMKSPIGKPRDDQITFHKFLKKYG 85
>gi|241698867|ref|XP_002411877.1| coiled-coil domain-containing protein MTMR15, putative [Ixodes
scapularis]
gi|215504808|gb|EEC14302.1| coiled-coil domain-containing protein MTMR15, putative [Ixodes
scapularis]
Length = 542
Score = 39.3 bits (91), Expect = 0.18, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 37 RRGCPDRLIITP-NGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKV 84
R G PD ++ P +G L EVK P LS +Q+ + EL G +V
Sbjct: 467 RSGLPDLVVWNPVDGRLKAAEVKGPGDTLSAKQVVWLRELLALGIDCEV 515
>gi|134288376|ref|YP_001110539.1| hypothetical protein Bcep1808_6849 [Burkholderia vietnamiensis G4]
gi|134133026|gb|ABO59736.1| hypothetical protein Bcep1808_6849 [Burkholderia vietnamiensis G4]
Length = 166
Score = 39.3 bits (91), Expect = 0.18, Method: Composition-based stats.
Identities = 11/69 (15%), Positives = 25/69 (36%)
Query: 27 CWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLV 86
++ G D + +G +EVK+P + Q + + + G +
Sbjct: 81 GENQRFVKFSEAGVSDIIGQLKDGRFLAVEVKRPGNTPTDDQWAFLRNVASGGGVAGWVD 140
Query: 87 SMEEVDNFL 95
++ NF+
Sbjct: 141 DPAQLRNFI 149
>gi|224062325|ref|XP_002194696.1| PREDICTED: similar to KIAA1018 protein [Taeniopygia guttata]
Length = 1099
Score = 39.3 bits (91), Expect = 0.19, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 37 RRGCPDRLIITPNGGLW-WIEVKKPTGRLSHQQMSEIEELRRRGQRVKV 84
R G PD L+ + + +EVK P RLS +QM + EL G V+V
Sbjct: 1037 RGGLPDLLVWRSHSRHFKLVEVKGPNDRLSPKQMLWLSELHELGAAVEV 1085
>gi|187920119|ref|YP_001889150.1| VRR-NUC domain-containing protein [Burkholderia phytofirmans PsJN]
gi|187718557|gb|ACD19780.1| VRR-NUC domain protein [Burkholderia phytofirmans PsJN]
Length = 636
Score = 39.3 bits (91), Expect = 0.19, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 22/52 (42%), Gaps = 1/52 (1%)
Query: 36 GRRGCPDRLIITP-NGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLV 86
R G PD + P IEVK P RL Q+ + + G V+VL
Sbjct: 510 NRSGLPDLIRFWPAERRYELIEVKGPGDRLQDNQIRWLAYCAQHGMPVRVLD 561
>gi|91778919|ref|YP_554127.1| hypothetical protein Bxe_B1179 [Burkholderia xenovorans LB400]
gi|91691579|gb|ABE34777.1| conserved hypothetical protein [Burkholderia xenovorans LB400]
Length = 623
Score = 39.3 bits (91), Expect = 0.19, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 22/52 (42%), Gaps = 1/52 (1%)
Query: 36 GRRGCPDRLIITP-NGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLV 86
R G PD + P IEVK P RL Q+ + + G V+VL
Sbjct: 509 NRSGLPDLIRFWPAERRYELIEVKGPGDRLQDNQIRWLAYCAQHGMPVRVLD 560
>gi|253583964|ref|ZP_04861162.1| predicted protein [Fusobacterium varium ATCC 27725]
gi|251834536|gb|EES63099.1| predicted protein [Fusobacterium varium ATCC 27725]
Length = 110
Score = 38.9 bits (90), Expect = 0.21, Method: Composition-based stats.
Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 38 RGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLVSMEEVDNFLEE 97
+G PD +++ + +EVK G+ S +Q ++ G V+ S+EEV N +E+
Sbjct: 50 KGFPD-ILVLKDSKCIGLEVKTSKGKQSKEQEEMEILMKEHGAAYYVVRSLEEVINIVEK 108
Query: 98 L 98
+
Sbjct: 109 I 109
>gi|284038012|ref|YP_003387942.1| VRR-NUC domain protein [Spirosoma linguale DSM 74]
gi|283817305|gb|ADB39143.1| VRR-NUC domain protein [Spirosoma linguale DSM 74]
Length = 578
Score = 38.9 bits (90), Expect = 0.23, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Query: 37 RRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQR---VKVLVSM 88
RG PD LI G ++EVK PT L QQ+ +E + G + V+V+ +
Sbjct: 524 TRGFPDLLIWNDQGDYSFVEVKSPTDHLGPQQLHWLEFFQTIGVQGKVVRVIWEL 578
>gi|295699629|ref|YP_003607522.1| VRR-NUC domain protein [Burkholderia sp. CCGE1002]
gi|295438842|gb|ADG18011.1| VRR-NUC domain protein [Burkholderia sp. CCGE1002]
Length = 589
Score = 38.9 bits (90), Expect = 0.24, Method: Composition-based stats.
Identities = 16/52 (30%), Positives = 22/52 (42%), Gaps = 1/52 (1%)
Query: 36 GRRGCPDRLIITP-NGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLV 86
R G PD + P IEVK P RL Q+ + + G V+V+
Sbjct: 514 NRSGLPDLIRFWPAERRYELIEVKGPGDRLQDNQIRWLAYCAQHGMPVRVVD 565
>gi|209521499|ref|ZP_03270203.1| VRR-NUC domain protein [Burkholderia sp. H160]
gi|209498059|gb|EDZ98210.1| VRR-NUC domain protein [Burkholderia sp. H160]
Length = 589
Score = 38.9 bits (90), Expect = 0.24, Method: Composition-based stats.
Identities = 16/52 (30%), Positives = 22/52 (42%), Gaps = 1/52 (1%)
Query: 36 GRRGCPDRLIITP-NGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLV 86
R G PD + P IEVK P RL Q+ + + G V+V+
Sbjct: 514 NRSGLPDLIRFWPAERRYELIEVKGPGDRLQDNQIRWLAYCAQHGMPVRVVD 565
>gi|319411650|emb|CBQ73694.1| conserved hypothetical protein [Sporisorium reilianum]
Length = 933
Score = 38.9 bits (90), Expect = 0.25, Method: Composition-based stats.
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 38 RGCPDRLII-TPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRV 82
G PD ++ + + ++EVK P RLS Q I+ L R G V
Sbjct: 880 SGMPDLVVWRMRDKVVRFVEVKGPGDRLSETQKVWIDVLLRAGVEV 925
>gi|254254035|ref|ZP_04947352.1| hypothetical protein BDAG_03323 [Burkholderia dolosa AUO158]
gi|124898680|gb|EAY70523.1| hypothetical protein BDAG_03323 [Burkholderia dolosa AUO158]
Length = 564
Score = 38.9 bits (90), Expect = 0.25, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 22/52 (42%), Gaps = 1/52 (1%)
Query: 36 GRRGCPDRLIITPN-GGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLV 86
R G PD + P+ IEVK P RL Q + R G V+V+
Sbjct: 495 NRSGLPDLVRFWPDERRYELIEVKGPGDRLQDNQTRWLAYCRAHGMPVRVVD 546
>gi|320166532|gb|EFW43431.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 896
Score = 38.5 bits (89), Expect = 0.26, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 6/62 (9%)
Query: 35 VGRRGCPDRLIIT--PNGG---LWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLVSME 89
G PD L++ P + +IEVK P LS QQ I++L R G V+V +E
Sbjct: 836 ESSSGMPD-LVVWSRPESSASFIRFIEVKGPNDTLSEQQRVWIDKLLRLGLDVQVCHVVE 894
Query: 90 EV 91
+V
Sbjct: 895 DV 896
>gi|221369892|ref|YP_002520988.1| hypothetical protein RSKD131_4055 [Rhodobacter sphaeroides KD131]
gi|221162944|gb|ACM03915.1| Hypothetical Protein RSKD131_4055 [Rhodobacter sphaeroides KD131]
Length = 131
Score = 38.5 bits (89), Expect = 0.28, Method: Composition-based stats.
Identities = 14/69 (20%), Positives = 30/69 (43%), Gaps = 4/69 (5%)
Query: 33 SFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLVSMEEVD 92
G D ++ +G + + E+K GRLS Q + + + +G ++ S+++
Sbjct: 55 VHPGFA---DLMV-LCDGRVLFFELKSLKGRLSPSQEAFRDAVLAQGHGWALVRSLDDAL 110
Query: 93 NFLEELACT 101
L + T
Sbjct: 111 GALADHGFT 119
>gi|90578407|ref|ZP_01234218.1| hypothetical protein VAS14_15189 [Vibrio angustum S14]
gi|90441493|gb|EAS66673.1| hypothetical protein VAS14_15189 [Vibrio angustum S14]
Length = 552
Score = 38.5 bits (89), Expect = 0.29, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Query: 37 RRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLV 86
R G PD LI+ N G W+EVK P +L Q+ + + G +V
Sbjct: 495 RSGMPD-LIMFNNTGYQWVEVKGPGDKLQDHQLRWLAFFDQHGIPAQVAY 543
>gi|323528049|ref|YP_004230201.1| VRR-NUC domain-containing protein [Burkholderia sp. CCGE1001]
gi|323385051|gb|ADX57141.1| VRR-NUC domain-containing protein [Burkholderia sp. CCGE1001]
Length = 610
Score = 38.5 bits (89), Expect = 0.29, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 22/52 (42%), Gaps = 1/52 (1%)
Query: 36 GRRGCPDRLIITP-NGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLV 86
R G PD + P IEVK P RL Q+ + + G V+VL
Sbjct: 528 NRSGLPDLIRFWPAERRYELIEVKGPGDRLQDNQIRWLAYCVQHGMPVRVLD 579
>gi|307546495|ref|YP_003898974.1| hypothetical protein HELO_3905 [Halomonas elongata DSM 2581]
gi|307218519|emb|CBV43789.1| hypothetical protein HELO_3905 [Halomonas elongata DSM 2581]
Length = 559
Score = 38.5 bits (89), Expect = 0.29, Method: Composition-based stats.
Identities = 16/52 (30%), Positives = 21/52 (40%), Gaps = 3/52 (5%)
Query: 36 GRRGCPDRLIITPNG---GLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKV 84
R G PD + P+ +IEVK P RL Q + + RG V
Sbjct: 499 NRSGLPDLIQFLPDAESPRYRFIEVKGPGDRLQDNQRRWLSFFQTRGIPAAV 550
>gi|291403999|ref|XP_002718265.1| PREDICTED: myotubularin related protein 15 [Oryctolagus cuniculus]
Length = 1033
Score = 38.5 bits (89), Expect = 0.30, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 30/50 (60%), Gaps = 3/50 (6%)
Query: 37 RRGCPDRLIITPNGGLWW--IEVKKPTGRLSHQQMSEIEELRRRGQRVKV 84
R G PD L++ + + +EVK P RLS +Q+ ++EL+R G V+V
Sbjct: 971 RGGLPD-LVVWSSRSHRFKLVEVKGPNDRLSPKQVIWLDELQRLGAAVEV 1019
>gi|184154943|ref|YP_001843283.1| hypothetical protein LAF_0467 [Lactobacillus fermentum IFO 3956]
gi|183226287|dbj|BAG26803.1| hypothetical phage protein [Lactobacillus fermentum IFO 3956]
Length = 114
Score = 38.5 bits (89), Expect = 0.31, Method: Composition-based stats.
Identities = 14/49 (28%), Positives = 22/49 (44%)
Query: 49 NGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLVSMEEVDNFLEE 97
+G ++IEVK TGR Q+ L G + S E+ ++E
Sbjct: 57 DGKAFFIEVKTQTGRPRKDQIQFHHMLTSHGIVHGIARSPEDAIKIVKE 105
>gi|254555659|ref|YP_003062076.1| phage protein [Lactobacillus plantarum JDM1]
gi|254044586|gb|ACT61379.1| phage protein [Lactobacillus plantarum JDM1]
Length = 110
Score = 38.5 bits (89), Expect = 0.32, Method: Composition-based stats.
Identities = 19/103 (18%), Positives = 38/103 (36%), Gaps = 14/103 (13%)
Query: 9 QTEKDVEKRLVTGAKKLDCWVRK------------ASFVGRR-GCPDRLIIT-PNGGLWW 54
E++++ ++ K C + + G G PD +G +++
Sbjct: 1 MREQEIQNQIRVAVSKNKCTIFRANVGKVEMKNGRWFDTGLPQGFPDLFGFRHSDGSIFF 60
Query: 55 IEVKKPTGRLSHQQMSEIEELRRRGQRVKVLVSMEEVDNFLEE 97
IE K TGR Q+ + L ++ + S E+ + E
Sbjct: 61 IECKNETGRPRADQIKFHKFLMKQHTIHGIARSPEDALKIINE 103
>gi|307104714|gb|EFN52966.1| hypothetical protein CHLNCDRAFT_137359 [Chlorella variabilis]
Length = 997
Score = 38.2 bits (88), Expect = 0.37, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Query: 39 GCPDRLIITPNGGLW-WIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLVSME 89
G PD L+ P EVK P RLS+QQ + I LR G +VL E
Sbjct: 935 GMPDLLLWRPARRDAKLAEVKGPRDRLSNQQRAWINALRDAGFHAEVLKVEE 986
>gi|152989195|ref|YP_001348784.1| hypothetical protein PSPA7_3424 [Pseudomonas aeruginosa PA7]
gi|150964353|gb|ABR86378.1| hypothetical protein PSPA7_3424 [Pseudomonas aeruginosa PA7]
Length = 549
Score = 38.2 bits (88), Expect = 0.39, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 22/54 (40%), Gaps = 2/54 (3%)
Query: 35 VGRR-GCPDRLIITP-NGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLV 86
G R G PD + P +EVK P RL Q+ ++ R R V V
Sbjct: 489 PGNRAGLPDLIQFWPAQRRYRMVEVKGPGDRLQDNQLRWLQFCRERDMPVAVCY 542
>gi|328860726|gb|EGG09831.1| hypothetical protein MELLADRAFT_103952 [Melampsora larici-populina
98AG31]
Length = 912
Score = 38.2 bits (88), Expect = 0.43, Method: Composition-based stats.
Identities = 23/77 (29%), Positives = 34/77 (44%), Gaps = 8/77 (10%)
Query: 27 CWVRKASFV--GRR--GCPDRLIIT--PNGGLWWIEVKKPTGRLSHQQMSEIEELR-RRG 79
C + K G R G PD L + + ++EVK P RLS Q++ ++ LR G
Sbjct: 837 CKLLKVLSEEYGFRKGGVPD-LCLWNHKEKKVLFVEVKGPGDRLSETQIAWLDLLRIGIG 895
Query: 80 QRVKVLVSMEEVDNFLE 96
V+V E+ D
Sbjct: 896 CEVEVCEVKEDEDQVFR 912
>gi|229824153|ref|ZP_04450222.1| hypothetical protein GCWU000282_01457 [Catonella morbi ATCC
51271]
gi|229786507|gb|EEP22621.1| hypothetical protein GCWU000282_01457 [Catonella morbi ATCC
51271]
Length = 96
Score = 38.2 bits (88), Expect = 0.43, Method: Composition-based stats.
Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 4/73 (5%)
Query: 10 TEKDVEKRLVTGAKKLDCWVRKASFVGR--RGCPDRLIITPNGGLWWIEVKKP-TGRLSH 66
EK VE + + + K G PD ++ G IEVKKP GR+S
Sbjct: 3 PEKKVENEIKKYLDHIGAYHIKIHGSAFMPAGTPD-ILACVKGVFVGIEVKKPKGGRVSD 61
Query: 67 QQMSEIEELRRRG 79
Q +I+++ + G
Sbjct: 62 LQKLKIKQIEQAG 74
>gi|225419969|ref|ZP_03762272.1| hypothetical protein CLOSTASPAR_06310 [Clostridium asparagiforme
DSM 15981]
gi|225041391|gb|EEG51637.1| hypothetical protein CLOSTASPAR_06310 [Clostridium asparagiforme
DSM 15981]
Length = 137
Score = 37.8 bits (87), Expect = 0.47, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 25/61 (40%), Gaps = 3/61 (4%)
Query: 38 RGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLV--SMEEVDNFL 95
G PD LI NG + +EVK GR S Q I + G L +E N +
Sbjct: 49 SGIPD-LICCVNGVMLAVEVKASNGRPSELQKLNINRINTSGGIGVFLYPEGFDEFKNLV 107
Query: 96 E 96
+
Sbjct: 108 K 108
>gi|91225498|ref|ZP_01260620.1| hypothetical protein V12G01_09225 [Vibrio alginolyticus 12G01]
gi|91189861|gb|EAS76134.1| hypothetical protein V12G01_09225 [Vibrio alginolyticus 12G01]
Length = 537
Score = 37.8 bits (87), Expect = 0.47, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 20/50 (40%), Gaps = 1/50 (2%)
Query: 37 RRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLV 86
R G PD LI WIEVK P +L Q I+E R V
Sbjct: 485 RNGMPD-LIAFKGNEFEWIEVKGPGDKLQDNQWRWIKEFTRLNVPFAVCY 533
>gi|311245149|ref|XP_003121714.1| PREDICTED: fanconi-associated nuclease 1-like [Sus scrofa]
Length = 1020
Score = 37.8 bits (87), Expect = 0.48, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 30/50 (60%), Gaps = 3/50 (6%)
Query: 37 RRGCPDRLIIT--PNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKV 84
R G PD L++ N +EVK P RLSH+QM ++ELRR G V+V
Sbjct: 958 RGGLPD-LVVWNSQNHRFKLVEVKGPNDRLSHKQMIWLDELRRLGAEVEV 1006
>gi|238024584|ref|YP_002908816.1| hypothetical protein bglu_2g11950 [Burkholderia glumae BGR1]
gi|237879249|gb|ACR31581.1| Hypothetical protein bglu_2g11950 [Burkholderia glumae BGR1]
Length = 569
Score = 37.8 bits (87), Expect = 0.48, Method: Composition-based stats.
Identities = 16/52 (30%), Positives = 22/52 (42%), Gaps = 1/52 (1%)
Query: 36 GRRGCPDRLIITP-NGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLV 86
R G PD + P IEVK P RL Q+ ++ G V+V+
Sbjct: 494 NRSGLPDLIRFWPAERRYELIEVKGPGDRLQDNQIRWLDYCVGHGMPVRVID 545
>gi|256826726|ref|YP_003150685.1| VRR-NUC domain-containing protein [Cryptobacterium curtum DSM
15641]
gi|256582869|gb|ACU94003.1| VRR-NUC domain-containing protein [Cryptobacterium curtum DSM
15641]
Length = 112
Score = 37.8 bits (87), Expect = 0.48, Method: Composition-based stats.
Identities = 15/62 (24%), Positives = 24/62 (38%), Gaps = 2/62 (3%)
Query: 38 RGCPDRLIITPNGGL--WWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLVSMEEVDNFL 95
G PD I G +IE+K + + QM + L+ +G V +E +
Sbjct: 45 AGVPDLCIPVARGVYHGLYIEMKAGRNKPTESQMRWLSLLQEQGYAATVCWGADEAIATI 104
Query: 96 EE 97
E
Sbjct: 105 GE 106
>gi|330820573|ref|YP_004349435.1| hypothetical protein bgla_2g14770 [Burkholderia gladioli BSR3]
gi|327372568|gb|AEA63923.1| hypothetical protein bgla_2g14770 [Burkholderia gladioli BSR3]
Length = 557
Score = 37.8 bits (87), Expect = 0.50, Method: Composition-based stats.
Identities = 16/52 (30%), Positives = 22/52 (42%), Gaps = 1/52 (1%)
Query: 36 GRRGCPDRLIITP-NGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLV 86
R G PD + P IEVK P RL Q+ ++ G V+V+
Sbjct: 494 NRSGLPDLIRFWPAERRYELIEVKGPGDRLQDNQIRWLDYCVAHGVPVRVID 545
>gi|254240258|ref|ZP_04933580.1| hypothetical protein PA2G_00901 [Pseudomonas aeruginosa 2192]
gi|126193636|gb|EAZ57699.1| hypothetical protein PA2G_00901 [Pseudomonas aeruginosa 2192]
Length = 559
Score = 37.8 bits (87), Expect = 0.54, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 25/61 (40%), Gaps = 2/61 (3%)
Query: 35 VGRR-GCPDRLIITP-NGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLVSMEEVD 92
G R G PD + P +EVK P RL Q+ ++ R R V V VD
Sbjct: 499 PGNRAGLPDLIQFWPAQRRYRMVEVKGPGDRLQDNQLRWLQFCREREMPVAVCYVRWHVD 558
Query: 93 N 93
+
Sbjct: 559 D 559
>gi|254234960|ref|ZP_04928283.1| hypothetical protein PACG_00836 [Pseudomonas aeruginosa C3719]
gi|126166891|gb|EAZ52402.1| hypothetical protein PACG_00836 [Pseudomonas aeruginosa C3719]
Length = 559
Score = 37.8 bits (87), Expect = 0.54, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 25/61 (40%), Gaps = 2/61 (3%)
Query: 35 VGRR-GCPDRLIITP-NGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLVSMEEVD 92
G R G PD + P +EVK P RL Q+ ++ R R V V VD
Sbjct: 499 PGNRAGLPDLIQFWPAQRRYRMVEVKGPGDRLQDNQLRWLQFCREREMPVAVCYVRWHVD 558
Query: 93 N 93
+
Sbjct: 559 D 559
>gi|320162834|gb|EFW39733.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 1064
Score = 37.8 bits (87), Expect = 0.55, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 39 GCPDRLIITPNGGLW-WIEVKKPTGRLSHQQMSEIEELRRRGQRVKV 84
G PD L+ P+ ++EVK +L+H+Q I LR G +V V
Sbjct: 1005 GLPDLLLWDPSRRAARFVEVKSENDKLAHKQHVWIHVLRMLGAQVDV 1051
>gi|296155907|ref|ZP_06838746.1| VRR-NUC domain protein [Burkholderia sp. Ch1-1]
gi|295893413|gb|EFG73192.1| VRR-NUC domain protein [Burkholderia sp. Ch1-1]
Length = 627
Score = 37.8 bits (87), Expect = 0.55, Method: Composition-based stats.
Identities = 16/52 (30%), Positives = 21/52 (40%), Gaps = 1/52 (1%)
Query: 36 GRRGCPDRLIITP-NGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLV 86
G PD + P IEVK P RL Q+ + + G V+VL
Sbjct: 513 NCSGLPDLIRFWPAERRYELIEVKGPGDRLQDNQIRWLAYCAQHGMPVRVLD 564
>gi|296389740|ref|ZP_06879215.1| hypothetical protein PaerPAb_16391 [Pseudomonas aeruginosa PAb1]
Length = 559
Score = 37.8 bits (87), Expect = 0.55, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 25/61 (40%), Gaps = 2/61 (3%)
Query: 35 VGRR-GCPDRLIITP-NGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLVSMEEVD 92
G R G PD + P +EVK P RL Q+ ++ R R V V VD
Sbjct: 499 PGNRAGLPDLIQFWPAQRRYRMVEVKGPGDRLQDNQLRWLQFCREREMPVAVCYVRWHVD 558
Query: 93 N 93
+
Sbjct: 559 D 559
>gi|15597062|ref|NP_250556.1| hypothetical protein PA1865 [Pseudomonas aeruginosa PAO1]
gi|218892178|ref|YP_002441045.1| hypothetical protein PLES_34591 [Pseudomonas aeruginosa LESB58]
gi|9947854|gb|AAG05254.1|AE004612_8 hypothetical protein PA1865 [Pseudomonas aeruginosa PAO1]
gi|218772404|emb|CAW28186.1| hypothetical protein PLES_34591 [Pseudomonas aeruginosa LESB58]
Length = 559
Score = 37.8 bits (87), Expect = 0.55, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 25/61 (40%), Gaps = 2/61 (3%)
Query: 35 VGRR-GCPDRLIITP-NGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLVSMEEVD 92
G R G PD + P +EVK P RL Q+ ++ R R V V VD
Sbjct: 499 PGNRAGLPDLIQFWPAQRRYRMVEVKGPGDRLQDNQLRWLQFCREREMPVAVCYVRWHVD 558
Query: 93 N 93
+
Sbjct: 559 D 559
>gi|227877437|ref|ZP_03995505.1| phage protein [Lactobacillus crispatus JV-V01]
gi|227862941|gb|EEJ70392.1| phage protein [Lactobacillus crispatus JV-V01]
Length = 125
Score = 37.8 bits (87), Expect = 0.56, Method: Composition-based stats.
Identities = 18/80 (22%), Positives = 32/80 (40%), Gaps = 3/80 (3%)
Query: 19 VTGAKKLDCWVRKASFVGRRGCPDRL-IITPNGGLWWIEVKKPTGRLSHQQMSEIEELRR 77
V K D G PD + ++IEVK P GR+ Q++ ++L
Sbjct: 35 VGKIKMQDGRFFNTGLPN--GFPDLFGWRWSDKQFYFIEVKAPKGRIRPDQLAFHQDLMH 92
Query: 78 RGQRVKVLVSMEEVDNFLEE 97
R + S+++ ++E
Sbjct: 93 RKVIHGIARSVDDALKIVKE 112
>gi|313110570|ref|ZP_07796455.1| hypothetical protein PA39016_002410156 [Pseudomonas aeruginosa
39016]
gi|310882957|gb|EFQ41551.1| hypothetical protein PA39016_002410156 [Pseudomonas aeruginosa
39016]
Length = 559
Score = 37.8 bits (87), Expect = 0.57, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 25/61 (40%), Gaps = 2/61 (3%)
Query: 35 VGRR-GCPDRLIITP-NGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLVSMEEVD 92
G R G PD + P +EVK P RL Q+ ++ R R V V VD
Sbjct: 499 PGNRAGLPDLIQFWPAQRRYRMVEVKGPGDRLQDNQLRWLQFCREREMPVAVCYVRWHVD 558
Query: 93 N 93
+
Sbjct: 559 D 559
>gi|307725794|ref|YP_003909007.1| VRR-NUC domain-containing protein [Burkholderia sp. CCGE1003]
gi|307586319|gb|ADN59716.1| VRR-NUC domain-containing protein [Burkholderia sp. CCGE1003]
Length = 668
Score = 37.4 bits (86), Expect = 0.58, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 22/52 (42%), Gaps = 1/52 (1%)
Query: 36 GRRGCPDRLIITP-NGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLV 86
R G PD + P IEVK P RL Q+ + + G V+VL
Sbjct: 549 NRSGLPDLIRFWPAERRYELIEVKGPGDRLQDNQIRWLTYCVQHGMPVRVLD 600
>gi|51596137|ref|YP_070328.1| hypothetical protein YPTB1802 [Yersinia pseudotuberculosis IP
32953]
gi|51589419|emb|CAH21041.1| hypothetical protein YPTB1802 [Yersinia pseudotuberculosis IP
32953]
Length = 152
Score = 37.4 bits (86), Expect = 0.59, Method: Composition-based stats.
Identities = 24/94 (25%), Positives = 36/94 (38%), Gaps = 11/94 (11%)
Query: 4 YSFHYQTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLW--WIEVKKPT 61
Y H E + AK+L R+G PD + P GG WIE+K
Sbjct: 56 YLIHIPNEGKRGPKAARDAKRLGL---------RKGVPDLFLALPRGGYAGLWIEMKSSK 106
Query: 62 GRLSHQQMSEIEELRRRGQRVKVLVSMEEVDNFL 95
G +++ Q + +L G +V V S +
Sbjct: 107 GHVNNNQNCWLSKLGDIGYKVDVSYSFLSAKGAI 140
>gi|116049818|ref|YP_791375.1| hypothetical protein PA14_40370 [Pseudomonas aeruginosa UCBPP-PA14]
gi|115585039|gb|ABJ11054.1| conserved hypothetical protein [Pseudomonas aeruginosa UCBPP-PA14]
Length = 558
Score = 37.4 bits (86), Expect = 0.60, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 25/61 (40%), Gaps = 2/61 (3%)
Query: 35 VGRR-GCPDRLIITP-NGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLVSMEEVD 92
G R G PD + P +EVK P RL Q+ ++ R R V V VD
Sbjct: 498 PGNRAGLPDLIQFWPAQRRYRMVEVKGPGDRLQDNQLRWLQFCREREMPVAVCYVRWHVD 557
Query: 93 N 93
+
Sbjct: 558 D 558
>gi|78062481|ref|YP_372389.1| hypothetical protein Bcep18194_B1631 [Burkholderia sp. 383]
gi|77970366|gb|ABB11745.1| hypothetical protein Bcep18194_B1631 [Burkholderia sp. 383]
Length = 564
Score = 37.4 bits (86), Expect = 0.60, Method: Composition-based stats.
Identities = 15/52 (28%), Positives = 20/52 (38%), Gaps = 1/52 (1%)
Query: 36 GRRGCPDRLIITPN-GGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLV 86
R G PD + P +EVK P RL Q + G V+V+
Sbjct: 495 NRSGLPDLVRFWPGERRYELVEVKGPGDRLQDNQTRWLAYCVAHGIPVRVID 546
>gi|327284500|ref|XP_003226975.1| PREDICTED: fanconi-associated nuclease 1-like [Anolis carolinensis]
Length = 1126
Score = 37.4 bits (86), Expect = 0.61, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 36 GRRGCPDRLII-TPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKV 84
R G PD ++ T +G +EVK P RLSH+QM + EL+ G V+V
Sbjct: 1063 SRGGLPDLVVWRTEDGQYKVVEVKGPNDRLSHKQMLWLAELQELGAAVEV 1112
>gi|167767010|ref|ZP_02439063.1| hypothetical protein CLOSS21_01528 [Clostridium sp. SS2/1]
gi|167710985|gb|EDS21564.1| hypothetical protein CLOSS21_01528 [Clostridium sp. SS2/1]
Length = 105
Score = 37.4 bits (86), Expect = 0.61, Method: Composition-based stats.
Identities = 21/97 (21%), Positives = 34/97 (35%), Gaps = 6/97 (6%)
Query: 9 QTEKDVEKRLVTGAKKL--DCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRL-S 65
E + L K C V KA +G PD LI+ + +EVKK
Sbjct: 10 MLESKFQSDLKKELKNKFPGCIVMKADSADIQGIPDLLILYKD-KWASLEVKKNKKASHR 68
Query: 66 HQQMSEIEELRRRGQRVKVLVSMEEVDNFLEELACTL 102
Q ++++ + E ++ L +L T
Sbjct: 69 PNQDYYVDKMEDMSFSRFIY--PENKEDVLNDLEQTF 103
>gi|114659867|ref|XP_510266.2| PREDICTED: similar to KIAA1018 protein [Pan troglodytes]
Length = 1017
Score = 37.4 bits (86), Expect = 0.62, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 37 RRGCPDRLIITPNGGLW-WIEVKKPTGRLSHQQMSEIEELRRRGQRVKV 84
R G PD ++ + +EVK P RLSH+QM + EL++ G V+V
Sbjct: 955 RGGLPDLVVWNSQSRHFKLVEVKGPNDRLSHKQMIWLAELQKLGAEVEV 1003
>gi|27366621|ref|NP_762148.1| hypothetical protein VV2_0165 [Vibrio vulnificus CMCP6]
gi|27358187|gb|AAO07138.1| hypothetical protein VV2_0165 [Vibrio vulnificus CMCP6]
Length = 542
Score = 37.4 bits (86), Expect = 0.62, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 22/57 (38%), Gaps = 1/57 (1%)
Query: 37 RRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLVSMEEVDN 93
R G PD LI +G WIEVK P +L Q I ++ V +
Sbjct: 485 RNGMPD-LIAFKDGEYQWIEVKGPGDKLQDNQWRWIHHFKQLAIPFAVCYVEHQAGE 540
>gi|226246523|ref|NP_055782.3| fanconi-associated nuclease 1 isoform a [Homo sapiens]
gi|160410012|sp|Q9Y2M0|FAN1_HUMAN RecName: Full=Fanconi-associated nuclease 1; AltName:
Full=FANCD2/FANCI-associated nuclease 1; AltName:
Full=Myotubularin-related protein 15
gi|119581661|gb|EAW61257.1| KIAA1018 [Homo sapiens]
Length = 1017
Score = 37.4 bits (86), Expect = 0.64, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 37 RRGCPDRLIITPNGGLW-WIEVKKPTGRLSHQQMSEIEELRRRGQRVKV 84
R G PD ++ + +EVK P RLSH+QM + EL++ G V+V
Sbjct: 955 RGGLPDLVVWNSQSRHFKLVEVKGPNDRLSHKQMIWLAELQKLGAEVEV 1003
>gi|168278791|dbj|BAG11275.1| myotubularin-related protein 15 [synthetic construct]
Length = 1017
Score = 37.4 bits (86), Expect = 0.64, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 37 RRGCPDRLIITPNGGLW-WIEVKKPTGRLSHQQMSEIEELRRRGQRVKV 84
R G PD ++ + +EVK P RLSH+QM + EL++ G V+V
Sbjct: 955 RGGLPDLVVWNSQSRHFKLVEVKGPNDRLSHKQMIWLAELQKLGAEVEV 1003
>gi|300390584|gb|ADK11100.1| fanconi anemia associated nuclease 1 [Homo sapiens]
Length = 1017
Score = 37.4 bits (86), Expect = 0.66, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 37 RRGCPDRLIITPNGGLW-WIEVKKPTGRLSHQQMSEIEELRRRGQRVKV 84
R G PD ++ + +EVK P RLSH+QM + EL++ G V+V
Sbjct: 955 RGGLPDLVVWNSQSRHFKLVEVKGPNDRLSHKQMIWLAELQKLGAEVEV 1003
>gi|58257674|dbj|BAA76862.3| KIAA1018 protein [Homo sapiens]
Length = 1040
Score = 37.4 bits (86), Expect = 0.66, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 37 RRGCPDRLIITPNGGLW-WIEVKKPTGRLSHQQMSEIEELRRRGQRVKV 84
R G PD ++ + +EVK P RLSH+QM + EL++ G V+V
Sbjct: 978 RGGLPDLVVWNSQSRHFKLVEVKGPNDRLSHKQMIWLAELQKLGAEVEV 1026
>gi|326789838|ref|YP_004307659.1| VRR-NUC domain-containing protein [Clostridium lentocellum DSM
5427]
gi|326540602|gb|ADZ82461.1| VRR-NUC domain-containing protein [Clostridium lentocellum DSM
5427]
Length = 128
Score = 37.4 bits (86), Expect = 0.74, Method: Composition-based stats.
Identities = 23/105 (21%), Positives = 39/105 (37%), Gaps = 15/105 (14%)
Query: 8 YQTEKDVEKRLVTGAKKLD----CWVRKASFVG-RRGCPDRLIITP---NGGLW-WIEVK 58
Y+ + E L+ +K G + G PD I+ P G +IE+K
Sbjct: 26 YEQARRPELALMYHVPNGGKRDIGTAKKFKLEGVKAGVPD--IVLPVSRGGYHGLYIELK 83
Query: 59 KPTGRLSHQQMSEIEELRRRG-QRVKVLVSM---EEVDNFLEELA 99
+ S +Q + L G + S EE+ N+L+ +
Sbjct: 84 VGKNKPSKEQQEWLHRLEAEGYYTTWCIGSKQAIEEIQNYLQMMR 128
>gi|269967871|ref|ZP_06181914.1| hypothetical protein VMC_33440 [Vibrio alginolyticus 40B]
gi|269827521|gb|EEZ81812.1| hypothetical protein VMC_33440 [Vibrio alginolyticus 40B]
Length = 537
Score = 37.0 bits (85), Expect = 0.75, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 20/50 (40%), Gaps = 1/50 (2%)
Query: 37 RRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLV 86
R G PD LI WIEVK P +L Q I+E R V
Sbjct: 485 RNGMPD-LIAFKENEFEWIEVKGPGDKLQDNQWRWIKEFTRLNVPFAVCY 533
>gi|198415862|ref|XP_002123827.1| PREDICTED: similar to Coiled-coil domain-containing protein MTMR15
[Ciona intestinalis]
Length = 823
Score = 37.0 bits (85), Expect = 0.75, Method: Composition-based stats.
Identities = 22/87 (25%), Positives = 35/87 (40%), Gaps = 10/87 (11%)
Query: 6 FHYQTEKDVEKRLVTGAKKLDCWVR--------KASFVGRRGCPDRLIITPNGGLWWIEV 57
+++ +E+ L + K + K R G PD L++ + +EV
Sbjct: 726 LNWERFASLEQVL-SLVKCIGGEALSGILGTMVKDFRHTRSGLPD-LVVWNDISYKLVEV 783
Query: 58 KKPTGRLSHQQMSEIEELRRRGQRVKV 84
K P RLS Q I +L G V+V
Sbjct: 784 KGPNDRLSTNQRVWIHKLMELGVDVEV 810
>gi|218676811|ref|YP_002395630.1| hypothetical protein VS_II1051 [Vibrio splendidus LGP32]
gi|218325079|emb|CAV26917.1| Conserved hypothetical protein [Vibrio splendidus LGP32]
Length = 547
Score = 37.0 bits (85), Expect = 0.76, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 21/50 (42%), Gaps = 1/50 (2%)
Query: 37 RRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLV 86
R G PD LI + WIEVK P +L Q I+E R V
Sbjct: 496 RNGMPD-LIAFKDDEFHWIEVKGPGDKLQDNQWRWIKEFERLSVPFSVCY 544
>gi|242243117|ref|ZP_04797562.1| conserved hypothetical protein [Staphylococcus epidermidis
W23144]
gi|242233465|gb|EES35777.1| conserved hypothetical protein [Staphylococcus epidermidis
W23144]
Length = 103
Score = 37.0 bits (85), Expect = 0.77, Method: Composition-based stats.
Identities = 19/87 (21%), Positives = 36/87 (41%), Gaps = 7/87 (8%)
Query: 8 YQTEKDVEKRLVTGAK-KLDCWVRKASFVGRR----GCPDRLIITPNGGLWWIEVKKPTG 62
Y+ E + + K + + K + G + G PD ++ NG IE+K TG
Sbjct: 10 YKNEAAFQNDFMQFLKHNPNAFAVKY-WAGNKFTVNGIPD-VLACINGVFHGIELKTNTG 67
Query: 63 RLSHQQMSEIEELRRRGQRVKVLVSME 89
+ Q +++++ G VL +
Sbjct: 68 VVRGIQKERMKQIKLAGGEAYVLRPKD 94
>gi|301777496|ref|XP_002924164.1| PREDICTED: coiled-coil domain-containing protein MTMR15-like
[Ailuropoda melanoleuca]
gi|306755801|sp|D2HNY3|FAN1_AILME RecName: Full=Fanconi-associated nuclease 1; AltName:
Full=FANCD2/FANCI-associated nuclease 1; AltName:
Full=Myotubularin-related protein 15
Length = 1025
Score = 37.0 bits (85), Expect = 0.77, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 37 RRGCPDRLIITPNGGLW-WIEVKKPTGRLSHQQMSEIEELRRRGQRVKV 84
R G PD ++ + +EVK P RLSH+QM ++EL++ G V+V
Sbjct: 963 RGGLPDLVVWNSQSRHFKLVEVKGPNDRLSHKQMLWLDELQKLGADVEV 1011
>gi|281341974|gb|EFB17558.1| hypothetical protein PANDA_013441 [Ailuropoda melanoleuca]
Length = 1026
Score = 37.0 bits (85), Expect = 0.77, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 37 RRGCPDRLIITPNGGLW-WIEVKKPTGRLSHQQMSEIEELRRRGQRVKV 84
R G PD ++ + +EVK P RLSH+QM ++EL++ G V+V
Sbjct: 964 RGGLPDLVVWNSQSRHFKLVEVKGPNDRLSHKQMLWLDELQKLGADVEV 1012
>gi|218295787|ref|ZP_03496583.1| transposase IS116/IS110/IS902 family protein [Thermus aquaticus
Y51MC23]
gi|218243946|gb|EED10473.1| transposase IS116/IS110/IS902 family protein [Thermus aquaticus
Y51MC23]
Length = 301
Score = 37.0 bits (85), Expect = 0.80, Method: Composition-based stats.
Identities = 18/62 (29%), Positives = 21/62 (33%), Gaps = 8/62 (12%)
Query: 24 KLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVK 83
L V G PD L + P G + +E GR L R G RV
Sbjct: 15 ALGDRVYHF--PNPDGIPDILSLLPQGAIVGMESTGVYGRPLAF------ALHRAGFRVY 66
Query: 84 VL 85
VL
Sbjct: 67 VL 68
>gi|146309124|ref|YP_001189589.1| hypothetical protein Pmen_4110 [Pseudomonas mendocina ymp]
gi|145577325|gb|ABP86857.1| hypothetical protein Pmen_4110 [Pseudomonas mendocina ymp]
Length = 547
Score = 37.0 bits (85), Expect = 0.81, Method: Composition-based stats.
Identities = 16/53 (30%), Positives = 18/53 (33%), Gaps = 1/53 (1%)
Query: 35 VGRRGCPDRLIITP-NGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLV 86
R G PD + P IEVK P RL Q + G V V
Sbjct: 490 ENRAGMPDLIQFWPAERRYRMIEVKGPGDRLQDNQKRWLAFCAEHGMPVSVCY 542
>gi|170103484|ref|XP_001882957.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164642328|gb|EDR06585.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 1062
Score = 37.0 bits (85), Expect = 0.84, Method: Composition-based stats.
Identities = 16/60 (26%), Positives = 23/60 (38%), Gaps = 9/60 (15%)
Query: 18 LVTGAKKLDCWVRKAS-------FVGRR-GCPDRLIITPNGGLWWIEVKKPTGRLSHQQM 69
LV + L + GR G PD ++ +G ++EVK P RL Q
Sbjct: 846 LVEIVECLGGESLAIVCRLFCDDYGGRSSGVPDLIV-WKDGLCKFVEVKGPGDRLQENQK 904
>gi|153811361|ref|ZP_01964029.1| hypothetical protein RUMOBE_01753 [Ruminococcus obeum ATCC 29174]
gi|149832488|gb|EDM87572.1| hypothetical protein RUMOBE_01753 [Ruminococcus obeum ATCC 29174]
Length = 174
Score = 37.0 bits (85), Expect = 0.84, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 25/61 (40%), Gaps = 2/61 (3%)
Query: 39 GCPDRLIITPNGGL--WWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLVSMEEVDNFLE 96
G PD + P G +IE+K GRL Q ++ L G V EE L+
Sbjct: 78 GIPDLCLPVPMGMYSGLYIEMKYDAGRLEDSQKKMLKALAAAGHYCTVCYGAEEAIRVLQ 137
Query: 97 E 97
E
Sbjct: 138 E 138
>gi|330974217|gb|EGH74283.1| hypothetical protein PSYAR_27396 [Pseudomonas syringae pv. aceris
str. M302273PT]
Length = 567
Score = 37.0 bits (85), Expect = 0.86, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Query: 36 GRRGCPDRLIITPNGGLW-WIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLV 86
R G PD + P L+ IEVK P RL Q+ ++ G V+V
Sbjct: 491 NRTGMPDLIQFFPQQRLYRMIEVKGPGDRLQDNQLRWLDFCAEHGMPVEVCY 542
>gi|312884144|ref|ZP_07743856.1| hypothetical protein VIBC2010_17315 [Vibrio caribbenthicus ATCC
BAA-2122]
gi|309368192|gb|EFP95732.1| hypothetical protein VIBC2010_17315 [Vibrio caribbenthicus ATCC
BAA-2122]
Length = 542
Score = 37.0 bits (85), Expect = 0.86, Method: Composition-based stats.
Identities = 15/48 (31%), Positives = 21/48 (43%), Gaps = 1/48 (2%)
Query: 37 RRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKV 84
R G PD LI+ + W+EVK P ++ Q + R G V
Sbjct: 485 RNGMPD-LILFKDSKYEWVEVKGPGDKIQDNQWRWFSQFLRIGVPFAV 531
>gi|264678354|ref|YP_003278261.1| hypothetical protein CtCNB1_2219 [Comamonas testosteroni CNB-2]
gi|262208867|gb|ACY32965.1| conserved hypothetical protein [Comamonas testosteroni CNB-2]
Length = 580
Score = 37.0 bits (85), Expect = 0.86, Method: Composition-based stats.
Identities = 14/54 (25%), Positives = 22/54 (40%), Gaps = 5/54 (9%)
Query: 36 GRRGCPDRLIITP-----NGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKV 84
R G PD + P +EVK P +L Q+ + + +G V+V
Sbjct: 515 NRTGFPDLVRFWPLRSDTGSRYELVEVKAPGDKLQDNQIRWLAYCKDQGIPVRV 568
>gi|312873802|ref|ZP_07733846.1| VRR-NUC domain protein [Lactobacillus iners LEAF 2052A-d]
gi|311090683|gb|EFQ49083.1| VRR-NUC domain protein [Lactobacillus iners LEAF 2052A-d]
Length = 111
Score = 37.0 bits (85), Expect = 0.88, Method: Composition-based stats.
Identities = 17/81 (20%), Positives = 35/81 (43%), Gaps = 14/81 (17%)
Query: 11 EKDVEKRLVTGAKKLDCWVRK------ASFVGR-------RGCPDRL-IITPNGGLWWIE 56
E +++K++ + +C + + G +G PD + +++IE
Sbjct: 4 EHEIQKKIQVAVSQRNCTIFRANVGKIFLSDGGYFDTGLPKGFPDLFGFRWCDHHIFFIE 63
Query: 57 VKKPTGRLSHQQMSEIEELRR 77
VK TG+ S +Q+ E L+
Sbjct: 64 VKSKTGKPSEEQVRFHEFLQS 84
>gi|327480718|gb|AEA84028.1| conserved hypothetical protein [Pseudomonas stutzeri DSM 4166]
Length = 545
Score = 37.0 bits (85), Expect = 0.90, Method: Composition-based stats.
Identities = 16/53 (30%), Positives = 22/53 (41%), Gaps = 1/53 (1%)
Query: 33 SFVGRRGCPDRLIITPNGGLW-WIEVKKPTGRLSHQQMSEIEELRRRGQRVKV 84
R G PD + + P + IEVK P RL Q I+ + G + V
Sbjct: 483 VTGNRTGLPDLIQLWPEARRYRMIEVKGPGDRLQDNQKRWIDYAHQHGLPIAV 535
>gi|37676334|ref|NP_936730.1| hypothetical protein VVA0674 [Vibrio vulnificus YJ016]
gi|37200876|dbj|BAC96700.1| conserved hypothetical protein [Vibrio vulnificus YJ016]
Length = 542
Score = 37.0 bits (85), Expect = 0.92, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 21/50 (42%), Gaps = 1/50 (2%)
Query: 37 RRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLV 86
R G PD LI +G WIEVK P +L Q I ++ V
Sbjct: 485 RNGMPD-LIAFKDGEYQWIEVKGPGDKLQDNQWRWIHHFKQLAIPFAVCY 533
>gi|297696162|ref|XP_002825277.1| PREDICTED: LOW QUALITY PROTEIN: coiled-coil domain-containing protein
MTMR15-like [Pongo abelii]
Length = 1017
Score = 36.6 bits (84), Expect = 0.99, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 30/50 (60%), Gaps = 3/50 (6%)
Query: 37 RRGCPDRLIITPNGGLWW--IEVKKPTGRLSHQQMSEIEELRRRGQRVKV 84
R G PD L++ + + +EVK P RLSH+QM + EL++ G V+V
Sbjct: 955 RGGLPD-LVVWNSQSHSFKLVEVKGPNDRLSHKQMIWLAELQKLGADVEV 1003
>gi|146282462|ref|YP_001172615.1| hypothetical protein PST_2108 [Pseudomonas stutzeri A1501]
gi|145570667|gb|ABP79773.1| conserved hypothetical protein [Pseudomonas stutzeri A1501]
Length = 545
Score = 36.6 bits (84), Expect = 1.0, Method: Composition-based stats.
Identities = 16/53 (30%), Positives = 22/53 (41%), Gaps = 1/53 (1%)
Query: 33 SFVGRRGCPDRLIITPNGGLW-WIEVKKPTGRLSHQQMSEIEELRRRGQRVKV 84
R G PD + + P + IEVK P RL Q I+ + G + V
Sbjct: 483 VTGNRTGLPDLIQLWPEARRYRMIEVKGPGDRLQDNQKRWIDYAHQHGLPIAV 535
>gi|148976727|ref|ZP_01813399.1| hypothetical protein VSWAT3_03731 [Vibrionales bacterium SWAT-3]
gi|145963840|gb|EDK29099.1| hypothetical protein VSWAT3_03731 [Vibrionales bacterium SWAT-3]
Length = 554
Score = 36.6 bits (84), Expect = 1.0, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 21/50 (42%), Gaps = 1/50 (2%)
Query: 37 RRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLV 86
R G PD LI + WIEVK P +L Q I+E R V
Sbjct: 503 RTGMPD-LIAFKDDQFHWIEVKGPGDKLQDNQWRWIKEFERLSVPFSVCY 551
>gi|153815133|ref|ZP_01967801.1| hypothetical protein RUMTOR_01358 [Ruminococcus torques ATCC
27756]
gi|331089503|ref|ZP_08338402.1| hypothetical protein HMPREF1025_01985 [Lachnospiraceae bacterium
3_1_46FAA]
gi|145847701|gb|EDK24619.1| hypothetical protein RUMTOR_01358 [Ruminococcus torques ATCC
27756]
gi|330404871|gb|EGG84409.1| hypothetical protein HMPREF1025_01985 [Lachnospiraceae bacterium
3_1_46FAA]
Length = 96
Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 19/87 (21%), Positives = 33/87 (37%), Gaps = 5/87 (5%)
Query: 9 QTEKDVEKRLVTGAKKL--DCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKP-TGRLS 65
E + + +L+ K++ C V K +G PD LI+ N +E KK +
Sbjct: 1 MLESEFQNKLIQELKRMFKGCIVTKLDASHIQGIPDLLILY-NDKWATLECKKSVRAKKQ 59
Query: 66 HQQMSEIEELRRRGQRVKVL-VSMEEV 91
Q + + + + EEV
Sbjct: 60 PNQEYYVGRMNEMSFSRFICPENKEEV 86
>gi|86148723|ref|ZP_01066999.1| hypothetical protein MED222_04205 [Vibrio sp. MED222]
gi|85833492|gb|EAQ51674.1| hypothetical protein MED222_04205 [Vibrio sp. MED222]
Length = 554
Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 21/50 (42%), Gaps = 1/50 (2%)
Query: 37 RRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLV 86
R G PD LI + WIEVK P +L Q I+E R V
Sbjct: 503 RTGMPD-LIAFKDDEFHWIEVKGPGDKLQDNQWRWIKEFERLSVPFSVCY 551
>gi|237801224|ref|ZP_04589685.1| hypothetical protein POR16_20534 [Pseudomonas syringae pv. oryzae
str. 1_6]
gi|331024082|gb|EGI04139.1| hypothetical protein POR16_20534 [Pseudomonas syringae pv. oryzae
str. 1_6]
Length = 561
Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 26/62 (41%), Gaps = 7/62 (11%)
Query: 36 GRRGCPDRLIITPNGGLW-WIEVKKPTGRLSHQQMSEIEELRRRGQRVKV------LVSM 88
R G PD + P+ + IEVK P RL Q+ ++ G V V L S
Sbjct: 490 NRTGMPDLIQFFPDQRRYRMIEVKGPGDRLQDNQLRWLDFCAEHGMPVDVCYVRWSLDSA 549
Query: 89 EE 90
E+
Sbjct: 550 EQ 551
>gi|194466774|ref|ZP_03072761.1| VRR-NUC domain protein [Lactobacillus reuteri 100-23]
gi|194453810|gb|EDX42707.1| VRR-NUC domain protein [Lactobacillus reuteri 100-23]
Length = 112
Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 22/103 (21%), Positives = 37/103 (35%), Gaps = 16/103 (15%)
Query: 10 TEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLII---TPNGG------------LWW 54
+E ++ + K C V + VG PD P+G +++
Sbjct: 3 SEHKIQNDIRVALSKHQCTVFR-VNVGSVKTPDGRFFSAGVPSGHPDLYGFRWSDHQVFY 61
Query: 55 IEVKKPTGRLSHQQMSEIEELRRRGQRVKVLVSMEEVDNFLEE 97
IEVK G+ Q+ E L +R + S + +EE
Sbjct: 62 IEVKNEKGKPRADQIRFHEMLTKREIIHGIARSAGDAVKIVEE 104
>gi|330447631|ref|ZP_08311279.1| VRR-NUC domain protein [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328491822|dbj|GAA05776.1| VRR-NUC domain protein [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 549
Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 37 RRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMS 70
R G PD LI+ + W+EVK P +L + Q+
Sbjct: 495 RSGMPD-LIMFNDTSYQWVEVKGPGDKLQNHQLR 527
>gi|195546633|ref|YP_002117661.1| p103 [Rhizobium phage 16-3]
gi|102642568|gb|ABF71349.1| p103 [Rhizobium phage 16-3]
Length = 169
Score = 36.6 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 20/49 (40%)
Query: 37 RRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVL 85
G D + G L IE K GRLS Q L R G V+V+
Sbjct: 88 TPGEADLRLYLVGGQLRMIENKVGRGRLSPAQAERHVALARLGFVVEVV 136
>gi|28900555|ref|NP_800210.1| hypothetical protein VPA0700 [Vibrio parahaemolyticus RIMD 2210633]
gi|260365436|ref|ZP_05777973.1| VRR-NUC domain protein [Vibrio parahaemolyticus K5030]
gi|260877501|ref|ZP_05889856.1| VRR-NUC domain protein [Vibrio parahaemolyticus AN-5034]
gi|260894827|ref|ZP_05903323.1| VRR-NUC domain protein [Vibrio parahaemolyticus Peru-466]
gi|28808935|dbj|BAC62043.1| hypothetical protein [Vibrio parahaemolyticus RIMD 2210633]
gi|308085312|gb|EFO35007.1| VRR-NUC domain protein [Vibrio parahaemolyticus Peru-466]
gi|308090762|gb|EFO40457.1| VRR-NUC domain protein [Vibrio parahaemolyticus AN-5034]
gi|308114334|gb|EFO51874.1| VRR-NUC domain protein [Vibrio parahaemolyticus K5030]
Length = 545
Score = 36.6 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 21/50 (42%), Gaps = 1/50 (2%)
Query: 37 RRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLV 86
R G PD LI + WIEVK P +L Q I+E R V
Sbjct: 485 RNGMPD-LIAFRDNEFEWIEVKGPGDKLQDNQWRWIKEFSRLNVPFAVCY 533
>gi|260901759|ref|ZP_05910154.1| VRR-NUC domain protein [Vibrio parahaemolyticus AQ4037]
gi|308108839|gb|EFO46379.1| VRR-NUC domain protein [Vibrio parahaemolyticus AQ4037]
Length = 545
Score = 36.6 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 21/50 (42%), Gaps = 1/50 (2%)
Query: 37 RRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLV 86
R G PD LI + WIEVK P +L Q I+E R V
Sbjct: 485 RNGMPD-LIAFRDNEFEWIEVKGPGDKLQDNQWRWIKEFSRLNVPFAVCY 533
>gi|328470498|gb|EGF41409.1| hypothetical protein VP10329_06857 [Vibrio parahaemolyticus 10329]
Length = 545
Score = 36.6 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 21/50 (42%), Gaps = 1/50 (2%)
Query: 37 RRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLV 86
R G PD LI + WIEVK P +L Q I+E R V
Sbjct: 485 RNGMPD-LIAFRDNEFEWIEVKGPGDKLQDNQWRWIKEFSRLNVPFVVCY 533
>gi|153836351|ref|ZP_01989018.1| VRR-NUC domain family [Vibrio parahaemolyticus AQ3810]
gi|149750253|gb|EDM60998.1| VRR-NUC domain family [Vibrio parahaemolyticus AQ3810]
Length = 545
Score = 36.6 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 21/50 (42%), Gaps = 1/50 (2%)
Query: 37 RRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLV 86
R G PD LI + WIEVK P +L Q I+E R V
Sbjct: 485 RNGMPD-LIAFRDNEFEWIEVKGPGDKLQDNQWRWIKEFSRLNVPFAVCY 533
>gi|326926515|ref|XP_003209445.1| PREDICTED: fanconi-associated nuclease 1-like [Meleagris gallopavo]
Length = 1041
Score = 36.6 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 37 RRGCPDRLIITPNGGLW-WIEVKKPTGRLSHQQMSEIEELRRRGQRVKV 84
R G PD ++ + + + +EVK P RLSH+QM + EL++ G V+V
Sbjct: 979 RGGLPDLVVWSTHSNHFKLVEVKGPNDRLSHKQMIWLSELKKLGAAVEV 1027
>gi|330809671|ref|YP_004354133.1| hypothetical protein PSEBR_a2829 [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327377779|gb|AEA69129.1| Conserved hypothetical protein [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
Length = 576
Score = 36.6 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 16/52 (30%), Positives = 20/52 (38%), Gaps = 1/52 (1%)
Query: 36 GRRGCPDRLIITPNGGLW-WIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLV 86
R G PD + P + IEVK P RL Q+ +E V V
Sbjct: 491 NRAGMPDLIQFWPQHKTYRMIEVKGPGDRLQDNQLRWLEFCHEHQMPVAVCY 542
>gi|118095660|ref|XP_413768.2| PREDICTED: similar to KIAA1018 protein [Gallus gallus]
Length = 1034
Score = 36.2 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 37 RRGCPDRLIITPNGGLW-WIEVKKPTGRLSHQQMSEIEELRRRGQRVKV 84
R G PD ++ + + + +EVK P RLSH+QM + EL++ G V+V
Sbjct: 972 RGGLPDLVVWSTHSNHFKLVEVKGPNDRLSHKQMIWLSELKKLGAAVEV 1020
>gi|261599115|ref|YP_003257363.1| hypothetical protein BPLAN_p003 [Blattabacterium sp. (Periplaneta
americana) str. BPLAN]
gi|261497772|gb|ACX84221.1| conserved hypothetical protein [Blattabacterium sp. (Periplaneta
americana) str. BPLAN]
Length = 144
Score = 36.2 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 17/68 (25%), Positives = 29/68 (42%), Gaps = 6/68 (8%)
Query: 37 RRGCPDRLIITPN-GGLWWI-EVKKPTGRLSHQQMSEIEELRRRGQRVKVLVSMEE---- 90
R G PD L+ P G E K +L+ Q + I L +V V + ++
Sbjct: 72 RPGVPDILVPFPQQGNTGMALEFKIKPNKLTENQKNIISILNSYKWKVYVCYNFDQAKNN 131
Query: 91 VDNFLEEL 98
+D +L+ +
Sbjct: 132 IDQYLKMI 139
>gi|228899779|ref|ZP_04064025.1| Wall associated protein [Bacillus thuringiensis IBL 4222]
gi|228859798|gb|EEN04212.1| Wall associated protein [Bacillus thuringiensis IBL 4222]
Length = 263
Score = 36.2 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 33 SFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRV 82
+ G R D L+ TP G L +EVK R + Q+ + + +R++G ++
Sbjct: 191 TSKGIRRV-DHLVRTPRGKLLAVEVKAGNARRTAMQLKKDKLMRKQGGKI 239
>gi|221196431|ref|ZP_03569478.1| VRR-NUC domain protein [Burkholderia multivorans CGD2M]
gi|221203103|ref|ZP_03576122.1| VRR-NUC domain protein [Burkholderia multivorans CGD2]
gi|221177037|gb|EEE09465.1| VRR-NUC domain protein [Burkholderia multivorans CGD2]
gi|221182985|gb|EEE15385.1| VRR-NUC domain protein [Burkholderia multivorans CGD2M]
Length = 567
Score = 36.2 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 16/52 (30%), Positives = 21/52 (40%), Gaps = 1/52 (1%)
Query: 36 GRRGCPDRLIITPN-GGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLV 86
R G PD + P+ IEVK P RL Q + G V+V+
Sbjct: 496 NRSGLPDLVRFWPDERRYELIEVKGPGDRLQDNQTRWLAYCIAHGMPVRVVD 547
>gi|221210059|ref|ZP_03583040.1| VRR-NUC domain protein [Burkholderia multivorans CGD1]
gi|221170747|gb|EEE03213.1| VRR-NUC domain protein [Burkholderia multivorans CGD1]
Length = 567
Score = 36.2 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 16/52 (30%), Positives = 21/52 (40%), Gaps = 1/52 (1%)
Query: 36 GRRGCPDRLIITPN-GGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLV 86
R G PD + P+ IEVK P RL Q + G V+V+
Sbjct: 496 NRSGLPDLVRFWPDERRYELIEVKGPGDRLQDNQTRWLAYCIAHGMPVRVVD 547
>gi|326692837|ref|ZP_08229842.1| hypothetical protein LargK3_03678 [Leuconostoc argentinum KCTC
3773]
Length = 100
Score = 36.2 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 13/57 (22%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 44 LIITPNGGLWWIEVKKP--TGRLSHQQMSEIEELRRRGQRVKVLVSMEEVDNFLEEL 98
+ I P+G +E+K+P G +S +Q + ++++R V+ S E+ + ++
Sbjct: 40 ITIYPDGRFIGLEIKRPDGGGVVSPEQNAVGKQIQRNQGLWYVIDSWEKFEEVWRDV 96
>gi|294868558|ref|XP_002765580.1| hypothetical protein Pmar_PMAR013643 [Perkinsus marinus ATCC 50983]
gi|239865659|gb|EEQ98297.1| hypothetical protein Pmar_PMAR013643 [Perkinsus marinus ATCC 50983]
Length = 707
Score = 36.2 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Query: 39 GCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLVSME 89
G PD L + + ++EVK P LS +Q I EL R G + +E
Sbjct: 644 GMPD-LTLRQGQRVRFVEVKGPGDDLSARQRGWIAELMRCGADAEAAYIVE 693
>gi|302385143|ref|YP_003820965.1| VRR-NUC domain protein [Clostridium saccharolyticum WM1]
gi|302195771|gb|ADL03342.1| VRR-NUC domain protein [Clostridium saccharolyticum WM1]
Length = 148
Score = 36.2 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 16/66 (24%), Positives = 24/66 (36%), Gaps = 2/66 (3%)
Query: 39 GCPDRLIITPNGGLW--WIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLVSMEEVDNFLE 96
G PD + P G +IE+K G + Q I ++ G V + +E
Sbjct: 59 GVPDLHLPIPKGAYAGLYIEMKYDDGTVEPPQKEWIRAMKAAGHFACVCYGYDYAVKVIE 118
Query: 97 ELACTL 102
E L
Sbjct: 119 EYVSLL 124
>gi|160409999|sp|Q1LWH4|FAN1_DANRE RecName: Full=Fanconi-associated nuclease 1; AltName:
Full=FANCD2/FANCI-associated nuclease 1; AltName:
Full=Myotubularin-related protein 15
Length = 988
Score = 36.2 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 37 RRGCPDRLII-TPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKV 84
R G PD ++ T + +EVK P RLS +Q ++ELR+ G V+V
Sbjct: 926 RGGLPDLVVWSTSSNKYKLVEVKGPNDRLSQKQQIWLDELRKLGADVEV 974
>gi|157279721|ref|NP_001038546.2| fanconi-associated nuclease 1 [Danio rerio]
gi|156229743|gb|AAI51827.1| Si:ch211-201b11.2 protein [Danio rerio]
Length = 988
Score = 36.2 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 37 RRGCPDRLII-TPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKV 84
R G PD ++ T + +EVK P RLS +Q ++ELR+ G V+V
Sbjct: 926 RGGLPDLVVWSTSSNKYKLVEVKGPNDRLSQKQQIWLDELRKLGADVEV 974
>gi|148726022|emb|CAN88260.1| novel protein [Danio rerio]
Length = 988
Score = 36.2 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 37 RRGCPDRLII-TPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKV 84
R G PD ++ T + +EVK P RLS +Q ++ELR+ G V+V
Sbjct: 926 RGGLPDLVVWSTSSNKYKLVEVKGPNDRLSQKQQIWLDELRKLGADVEV 974
>gi|94733114|emb|CAK04388.1| novel protein [Danio rerio]
Length = 988
Score = 36.2 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 37 RRGCPDRLII-TPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKV 84
R G PD ++ T + +EVK P RLS +Q ++ELR+ G V+V
Sbjct: 926 RGGLPDLVVWSTSSNKYKLVEVKGPNDRLSQKQQIWLDELRKLGADVEV 974
>gi|73951017|ref|XP_536169.2| PREDICTED: similar to C01G5.8 isoform 1 [Canis familiaris]
gi|73951019|ref|XP_856650.1| PREDICTED: similar to C01G5.8 isoform 2 [Canis familiaris]
gi|73951021|ref|XP_856688.1| PREDICTED: similar to C01G5.8 isoform 3 [Canis familiaris]
Length = 1029
Score = 36.2 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 37 RRGCPDRLIITPNG-GLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKV 84
R G PD ++ + +EVK P RLSH+QM ++EL++ G V+V
Sbjct: 967 RGGLPDLVVWNSQSHRVKLVEVKGPNDRLSHKQMIWLDELQKLGAEVEV 1015
>gi|260777771|ref|ZP_05886664.1| hypothetical protein VIC_003168 [Vibrio coralliilyticus ATCC
BAA-450]
gi|260605784|gb|EEX32069.1| hypothetical protein VIC_003168 [Vibrio coralliilyticus ATCC
BAA-450]
Length = 547
Score = 36.2 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 16/50 (32%), Positives = 20/50 (40%), Gaps = 1/50 (2%)
Query: 37 RRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLV 86
R G PD LI+ + W+EVK P RL Q E + V
Sbjct: 495 RSGMPD-LILFKDDRFEWVEVKGPGDRLQDNQWRWFHEFIKLKVPFSVCY 543
>gi|126277238|ref|XP_001373737.1| PREDICTED: similar to novel lectin C-type domain containing protein
[Monodelphis domestica]
Length = 1112
Score = 36.2 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 31/50 (62%), Gaps = 3/50 (6%)
Query: 37 RRGCPDRLIITPNGGLWW--IEVKKPTGRLSHQQMSEIEELRRRGQRVKV 84
R G PD L++ + +EVK P RLSH+QM ++EL++ G +V+V
Sbjct: 1050 RGGLPD-LVVWNTQKNLFKLVEVKGPNDRLSHKQMIWLDELQQLGAQVEV 1098
>gi|120552958|ref|YP_957309.1| hypothetical protein Maqu_0014 [Marinobacter aquaeolei VT8]
gi|120322807|gb|ABM17122.1| conserved hypothetical protein [Marinobacter aquaeolei VT8]
Length = 566
Score = 36.2 bits (83), Expect = 1.5, Method: Composition-based stats.
Identities = 17/64 (26%), Positives = 25/64 (39%), Gaps = 5/64 (7%)
Query: 37 RRGCPDRLIITPNG-----GLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLVSMEEV 91
R G PD + + P IEVK P RL Q+ ++ R+G V +
Sbjct: 502 RSGFPDLIRLVPEADHPEQRYEMIEVKGPGDRLQDHQVRWLQFFARQGIPASVCYVRWQD 561
Query: 92 DNFL 95
D +
Sbjct: 562 DEAI 565
>gi|257467662|ref|NP_001158142.1| myotubularin related protein 15 [Bos taurus]
gi|296475478|gb|DAA17593.1| myotubularin related protein 15 [Bos taurus]
Length = 1023
Score = 36.2 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 37 RRGCPDRLIITPNGGLW-WIEVKKPTGRLSHQQMSEIEELRRRGQRVKV 84
R G PD ++ + +EVK P RLS +QM ++ELRR G V+V
Sbjct: 961 RGGLPDLVVWSSQSHHVKLVEVKGPHDRLSQKQMIWLDELRRLGADVEV 1009
>gi|262395598|ref|YP_003287451.1| hypothetical protein VEA_000298 [Vibrio sp. Ex25]
gi|262339192|gb|ACY52986.1| hypothetical protein VEA_000298 [Vibrio sp. Ex25]
Length = 537
Score = 36.2 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 20/50 (40%), Gaps = 1/50 (2%)
Query: 37 RRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLV 86
R G PD LI WIEVK P ++ Q I+E R V
Sbjct: 485 RNGMPD-LIAFKENEFEWIEVKGPGDKIQDNQWRWIKEFTRLNVPFAVCY 533
>gi|170690441|ref|ZP_02881608.1| VRR-NUC domain protein [Burkholderia graminis C4D1M]
gi|170144876|gb|EDT13037.1| VRR-NUC domain protein [Burkholderia graminis C4D1M]
Length = 595
Score = 36.2 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
Query: 36 GRRGCPDRLIITP-NGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVL 85
R G PD + P IEVK P RL Q+ + + G V+V+
Sbjct: 522 NRSGLPDLIRFWPAERRYELIEVKGPGDRLQDNQIRWLAYCVQHGMPVRVV 572
>gi|186474090|ref|YP_001861432.1| VRR-NUC domain-containing protein [Burkholderia phymatum STM815]
gi|184196422|gb|ACC74386.1| VRR-NUC domain protein [Burkholderia phymatum STM815]
Length = 571
Score = 36.2 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 16/52 (30%), Positives = 21/52 (40%), Gaps = 1/52 (1%)
Query: 36 GRRGCPDRLIITP-NGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLV 86
R G PD + P IEVK P RL Q+ + + V+VL
Sbjct: 500 NRSGLPDLIRFWPRERRYELIEVKGPGDRLQDNQIRWLAYCVQHDMPVRVLD 551
>gi|84390470|ref|ZP_00991481.1| hypothetical protein V12B01_11885 [Vibrio splendidus 12B01]
gi|84376730|gb|EAP93606.1| hypothetical protein V12B01_11885 [Vibrio splendidus 12B01]
Length = 116
Score = 36.2 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 21/50 (42%), Gaps = 1/50 (2%)
Query: 37 RRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLV 86
R G PD LI + WIEVK P +L Q I+E R V
Sbjct: 65 RTGMPD-LIAFKDKEFHWIEVKGPGDKLQDNQWRWIKEFERLSVPFSVCY 113
>gi|109080444|ref|XP_001109813.1| PREDICTED: coiled-coil domain-containing protein MTMR15-like [Macaca
mulatta]
Length = 1016
Score = 35.9 bits (82), Expect = 1.7, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 37 RRGCPDRLIITPNG-GLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKV 84
R G PD ++ +EVK P RLSH+QM + EL++ G V+V
Sbjct: 954 RGGLPDLVVWNSQSHRFKLVEVKGPNDRLSHKQMIWLAELQKLGAEVEV 1002
>gi|77458914|ref|YP_348420.1| hypothetical protein Pfl01_2689 [Pseudomonas fluorescens Pf0-1]
gi|77382917|gb|ABA74430.1| conserved hypothetical protein [Pseudomonas fluorescens Pf0-1]
Length = 550
Score = 35.9 bits (82), Expect = 1.7, Method: Composition-based stats.
Identities = 13/36 (36%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Query: 36 GRRGCPDRLIITPNGGLW-WIEVKKPTGRLSHQQMS 70
R G PD + P + IEVK P RL Q+
Sbjct: 491 NRAGMPDLIQFWPQHKTYRMIEVKGPGDRLQDNQLR 526
>gi|37676521|ref|NP_936917.1| hypothetical protein VVA0861 [Vibrio vulnificus YJ016]
gi|37201063|dbj|BAC96887.1| hypothetical protein [Vibrio vulnificus YJ016]
Length = 153
Score = 35.9 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 5/67 (7%)
Query: 36 GRRGCPDRLIITPNGGL--WWIEVKKPT---GRLSHQQMSEIEELRRRGQRVKVLVSMEE 90
G +G PD ++ P IE+K P ++ Q + E+LR G RV++ S EE
Sbjct: 83 GSKGYPDLILDIPTKKYPGLRIEMKAPEPYYSYVTSSQENWHEKLRAMGYRVEICNSYEE 142
Query: 91 VDNFLEE 97
+ +
Sbjct: 143 GKILIMD 149
>gi|149691096|ref|XP_001491319.1| PREDICTED: similar to Coiled-coil domain-containing protein MTMR15
[Equus caballus]
Length = 1028
Score = 35.9 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 37 RRGCPDRLIITPNG-GLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKV 84
R G PD ++ +EVK P RLSH+QM + EL++ G V+V
Sbjct: 966 RGGLPDLVVWNSQSHRFKLVEVKGPNDRLSHKQMIWLAELQKLGAEVEV 1014
>gi|313123976|ref|YP_004034235.1| phage protein [Lactobacillus delbrueckii subsp. bulgaricus ND02]
gi|312280539|gb|ADQ61258.1| Phage protein [Lactobacillus delbrueckii subsp. bulgaricus ND02]
Length = 81
Score = 35.9 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 14/49 (28%), Positives = 24/49 (48%)
Query: 49 NGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLVSMEEVDNFLEE 97
G +++IE+K TG+ Q+ E L R G + S E+ ++E
Sbjct: 24 GGKIFYIEMKDKTGKARDSQIRFHEMLSRWGVIHGIARSPEDALKIVDE 72
>gi|163839981|ref|YP_001624386.1| ATP-dependent DNA helicase [Renibacterium salmoninarum ATCC 33209]
gi|162953457|gb|ABY22972.1| ATP-dependent DNA helicase [Renibacterium salmoninarum ATCC 33209]
Length = 1073
Score = 35.9 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 20/38 (52%)
Query: 38 RGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEEL 75
+G DRL +T G L +++K + + Q+ + +L
Sbjct: 940 KGIVDRLELTAEGTLIVVDLKTGKNKPTAAQVEQHPQL 977
>gi|320158509|ref|YP_004190887.1| hypothetical protein VVM_01371 [Vibrio vulnificus MO6-24/O]
gi|319933821|gb|ADV88684.1| hypothetical protein restriction endonuclease-like VRR-NUC domain
[Vibrio vulnificus MO6-24/O]
Length = 542
Score = 35.9 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 21/50 (42%), Gaps = 1/50 (2%)
Query: 37 RRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLV 86
R G PD LI +G WIEVK P +L Q I ++ V
Sbjct: 485 RNGMPD-LIAFRDGEYQWIEVKGPGDKLQGNQWRWIHHFKQLAIPFAVCY 533
>gi|325522641|gb|EGD01166.1| hypothetical protein B1M_27926 [Burkholderia sp. TJI49]
Length = 211
Score = 35.9 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 16/52 (30%), Positives = 20/52 (38%), Gaps = 1/52 (1%)
Query: 36 GRRGCPDRLIITPN-GGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLV 86
R G PD + P IEVK P RL Q + G V+V+
Sbjct: 142 NRSGLPDLVRFWPGERRYELIEVKGPGDRLQDNQTRWLAYCVAHGMPVRVVD 193
>gi|312960974|ref|ZP_07775479.1| hypothetical protein PFWH6_2886 [Pseudomonas fluorescens WH6]
gi|311284632|gb|EFQ63208.1| hypothetical protein PFWH6_2886 [Pseudomonas fluorescens WH6]
Length = 549
Score = 35.9 bits (82), Expect = 1.9, Method: Composition-based stats.
Identities = 16/52 (30%), Positives = 21/52 (40%), Gaps = 1/52 (1%)
Query: 36 GRRGCPDRLIITPNGGLW-WIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLV 86
R G PD + P + IEVK P RL Q+ +E + V V
Sbjct: 490 NRAGMPDLIQFWPAQKTYRMIEVKGPGDRLQDNQLRWLEFCAQYQMPVTVCY 541
>gi|312131691|ref|YP_003999031.1| vrr-nuc domaiN-containing protein [Leadbetterella byssophila DSM
17132]
gi|311908237|gb|ADQ18678.1| VRR-NUC domain-containing protein [Leadbetterella byssophila DSM
17132]
Length = 546
Score = 35.9 bits (82), Expect = 1.9, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Query: 35 VGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVL 85
RG PD L+I IE+K P LSHQQ+ ++ + G + +VL
Sbjct: 491 ENSRGMPD-LLIWDEETYELIEIKSPNDALSHQQLYWLKTFQELGIKARVL 540
>gi|222110614|ref|YP_002552878.1| vrr-nuc domain-containing protein [Acidovorax ebreus TPSY]
gi|221730058|gb|ACM32878.1| VRR-NUC domain protein [Acidovorax ebreus TPSY]
Length = 561
Score = 35.9 bits (82), Expect = 1.9, Method: Composition-based stats.
Identities = 14/54 (25%), Positives = 22/54 (40%), Gaps = 5/54 (9%)
Query: 36 GRRGCPDRLIITPNG-----GLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKV 84
R G PD + P +EVK P +L Q+ ++ +G V+V
Sbjct: 499 NRTGLPDLVRFWPGRPPGAERYALVEVKAPGDKLQDNQIRWLDYCVAQGIPVQV 552
>gi|121594770|ref|YP_986666.1| hypothetical protein Ajs_2429 [Acidovorax sp. JS42]
gi|120606850|gb|ABM42590.1| conserved hypothetical protein [Acidovorax sp. JS42]
Length = 561
Score = 35.9 bits (82), Expect = 1.9, Method: Composition-based stats.
Identities = 14/54 (25%), Positives = 22/54 (40%), Gaps = 5/54 (9%)
Query: 36 GRRGCPDRLIITPNG-----GLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKV 84
R G PD + P +EVK P +L Q+ ++ +G V+V
Sbjct: 499 NRTGLPDLVRFWPGRPPGAERYALVEVKAPGDKLQDNQIRWLDYCVAQGIPVQV 552
>gi|330940193|gb|EGH43335.1| hypothetical protein PSYPI_13456 [Pseudomonas syringae pv. pisi
str. 1704B]
Length = 93
Score = 35.9 bits (82), Expect = 2.0, Method: Composition-based stats.
Identities = 16/52 (30%), Positives = 22/52 (42%), Gaps = 1/52 (1%)
Query: 36 GRRGCPDRLIITPNGGLW-WIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLV 86
R G PD + P + IEVK P RL Q+ ++ G V+V
Sbjct: 17 NRTGMPDLIQFFPEQRRYRMIEVKGPGDRLQDNQLRWLDFCAEHGMPVEVCY 68
>gi|170698650|ref|ZP_02889717.1| VRR-NUC domain protein [Burkholderia ambifaria IOP40-10]
gi|170136429|gb|EDT04690.1| VRR-NUC domain protein [Burkholderia ambifaria IOP40-10]
Length = 564
Score = 35.9 bits (82), Expect = 2.0, Method: Composition-based stats.
Identities = 16/52 (30%), Positives = 20/52 (38%), Gaps = 1/52 (1%)
Query: 36 GRRGCPDRLIITPN-GGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLV 86
R G PD + P IEVK P RL Q + G V+V+
Sbjct: 495 NRSGLPDLVRFWPGERRYELIEVKGPGDRLQDNQTRWLAYCVAHGIPVRVVD 546
>gi|167754375|ref|ZP_02426502.1| hypothetical protein ALIPUT_02669 [Alistipes putredinis DSM 17216]
gi|167659000|gb|EDS03130.1| hypothetical protein ALIPUT_02669 [Alistipes putredinis DSM 17216]
Length = 115
Score = 35.9 bits (82), Expect = 2.0, Method: Composition-based stats.
Identities = 19/68 (27%), Positives = 28/68 (41%), Gaps = 5/68 (7%)
Query: 37 RRGCPDRLIITPNGGLWW--IEVKKPTGRLSHQQMSEIEELRRRGQRVKVLVSMEEVDNF 94
+G D L++ P IE+K PTGR Q + E G + + S D F
Sbjct: 50 MKGVADLLLLFPAKRFHGLCIEMKTPTGRQQPSQKAWQERAEWAGYKYVICRSF---DEF 106
Query: 95 LEELACTL 102
+ E+ L
Sbjct: 107 MAEIDAYL 114
>gi|172063296|ref|YP_001810947.1| VRR-NUC domain-containing protein [Burkholderia ambifaria MC40-6]
gi|171995813|gb|ACB66731.1| VRR-NUC domain protein [Burkholderia ambifaria MC40-6]
Length = 576
Score = 35.9 bits (82), Expect = 2.0, Method: Composition-based stats.
Identities = 16/52 (30%), Positives = 20/52 (38%), Gaps = 1/52 (1%)
Query: 36 GRRGCPDRLIITPN-GGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLV 86
R G PD + P IEVK P RL Q + G V+V+
Sbjct: 507 NRSGLPDLVRFWPGERRYELIEVKGPGDRLQDNQTRWLAYCVAHGIPVRVVD 558
>gi|115358550|ref|YP_775688.1| hypothetical protein Bamb_3800 [Burkholderia ambifaria AMMD]
gi|115283838|gb|ABI89354.1| conserved hypothetical protein [Burkholderia ambifaria AMMD]
Length = 564
Score = 35.9 bits (82), Expect = 2.0, Method: Composition-based stats.
Identities = 16/52 (30%), Positives = 20/52 (38%), Gaps = 1/52 (1%)
Query: 36 GRRGCPDRLIITPN-GGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLV 86
R G PD + P IEVK P RL Q + G V+V+
Sbjct: 495 NRSGLPDLVRFWPGERRYELIEVKGPGDRLQDNQTRWLAYCVAHGIPVRVVD 546
>gi|134293602|ref|YP_001117338.1| hypothetical protein Bcep1808_4916 [Burkholderia vietnamiensis G4]
gi|134136759|gb|ABO57873.1| conserved hypothetical protein [Burkholderia vietnamiensis G4]
Length = 565
Score = 35.9 bits (82), Expect = 2.0, Method: Composition-based stats.
Identities = 16/52 (30%), Positives = 20/52 (38%), Gaps = 1/52 (1%)
Query: 36 GRRGCPDRLIITPN-GGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLV 86
R G PD + P IEVK P RL Q + G V+V+
Sbjct: 496 NRSGLPDLVRFWPGERRYELIEVKGPGDRLQDNQTRWLAYCVAHGIPVRVVD 547
>gi|330954658|gb|EGH54918.1| hypothetical protein PSYCIT7_25544 [Pseudomonas syringae Cit 7]
Length = 567
Score = 35.9 bits (82), Expect = 2.0, Method: Composition-based stats.
Identities = 17/59 (28%), Positives = 25/59 (42%), Gaps = 4/59 (6%)
Query: 36 GRRGCPDRLIITPNGGLW-WIEVKKPTGRLSHQQMSEIEELRRRGQRV---KVLVSMEE 90
R G PD + P + IEVK P RL Q+ ++ + G V V S ++
Sbjct: 491 NRTGMPDLIQFFPEQRRYRMIEVKGPGDRLQDNQLRWLDFCAKHGMPVEVCYVQWSTDD 549
>gi|221067223|ref|ZP_03543328.1| VRR-NUC domain protein [Comamonas testosteroni KF-1]
gi|220712246|gb|EED67614.1| VRR-NUC domain protein [Comamonas testosteroni KF-1]
Length = 586
Score = 35.9 bits (82), Expect = 2.1, Method: Composition-based stats.
Identities = 14/54 (25%), Positives = 21/54 (38%), Gaps = 5/54 (9%)
Query: 36 GRRGCPDRLIITP-----NGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKV 84
R G PD + P +EVK P +L Q+ + +G V+V
Sbjct: 521 NRTGFPDLVRFWPLRSDAGSRYELVEVKAPGDKLQDNQIRWLAYCSEQGIPVRV 574
>gi|89094794|ref|ZP_01167728.1| hypothetical protein MED92_11859 [Oceanospirillum sp. MED92]
gi|89080959|gb|EAR60197.1| hypothetical protein MED92_11859 [Oceanospirillum sp. MED92]
Length = 561
Score = 35.9 bits (82), Expect = 2.1, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Query: 37 RRGCPDRLIITPNGGLW-WIEVKKPTGRLSHQQMSEIEELRRRGQRVKV 84
RRG PD + + IEVK P RL Q +E L ++G V+V
Sbjct: 503 RRGLPDLICFDKQANTYRMIEVKGPGDRLQDHQRLWLEYLHQKGIDVEV 551
>gi|312977541|ref|ZP_07789289.1| phage protein [Lactobacillus crispatus CTV-05]
gi|310895972|gb|EFQ45038.1| phage protein [Lactobacillus crispatus CTV-05]
Length = 125
Score = 35.9 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 31/75 (41%), Gaps = 5/75 (6%)
Query: 24 KLDCWVRKASFVGRRGCPDRL-IITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRV 82
K R + G PD + + +++IEVK P GR+S Q +L +
Sbjct: 42 KNGGLFRGV----KPGTPDLIGYRLKDRQVFFIEVKAPKGRISQAQQLYHLDLMHKHVIH 97
Query: 83 KVLVSMEEVDNFLEE 97
+ S+E+ + E
Sbjct: 98 GIARSVEDAVKIVNE 112
>gi|229590595|ref|YP_002872714.1| hypothetical protein PFLU3139 [Pseudomonas fluorescens SBW25]
gi|229362461|emb|CAY49367.1| conserved hypothetical protein [Pseudomonas fluorescens SBW25]
Length = 548
Score = 35.5 bits (81), Expect = 2.2, Method: Composition-based stats.
Identities = 13/36 (36%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Query: 36 GRRGCPDRLIITPNGGLW-WIEVKKPTGRLSHQQMS 70
R G PD + P + IEVK P RL Q+
Sbjct: 490 NRAGMPDLIQFWPAQKTYRMIEVKGPGDRLQDNQLR 525
>gi|330958251|gb|EGH58511.1| hypothetical protein PMA4326_06722 [Pseudomonas syringae pv.
maculicola str. ES4326]
Length = 562
Score = 35.5 bits (81), Expect = 2.2, Method: Composition-based stats.
Identities = 16/52 (30%), Positives = 22/52 (42%), Gaps = 1/52 (1%)
Query: 36 GRRGCPDRLIITPNGGLW-WIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLV 86
R G PD + P + IEVK P RL Q+ ++ G V+V
Sbjct: 491 NRTGMPDLIQFFPEQRRYRMIEVKGPGDRLQDNQLRWLDFCAEHGMPVEVCY 542
>gi|294935346|ref|XP_002781397.1| hypothetical protein Pmar_PMAR020783 [Perkinsus marinus ATCC 50983]
gi|239891978|gb|EER13192.1| hypothetical protein Pmar_PMAR020783 [Perkinsus marinus ATCC 50983]
Length = 142
Score = 35.5 bits (81), Expect = 2.2, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Query: 39 GCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLVSME 89
G PD L + + ++EVK P LS +Q I EL R G + +E
Sbjct: 79 GMPD-LTLRQGQRVRFVEVKGPGDDLSARQRGWIAELMRCGADAEAAYIVE 128
>gi|311696611|gb|ADP99484.1| protein containing VRR-NUC domain [marine bacterium HP15]
Length = 569
Score = 35.5 bits (81), Expect = 2.3, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 20/55 (36%), Gaps = 5/55 (9%)
Query: 37 RRGCPDRLIITPN-----GGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLV 86
R G PD + PN IEVK P RL Q+ +E G V
Sbjct: 505 RSGFPDLIRFLPNVAEPDKRYEMIEVKGPGDRLQDHQIRWLEFFAAEGIPASVCY 559
>gi|293605909|ref|ZP_06688279.1| conserved hypothetical protein [Achromobacter piechaudii ATCC
43553]
gi|292815696|gb|EFF74807.1| conserved hypothetical protein [Achromobacter piechaudii ATCC
43553]
Length = 563
Score = 35.5 bits (81), Expect = 2.3, Method: Composition-based stats.
Identities = 15/50 (30%), Positives = 21/50 (42%), Gaps = 1/50 (2%)
Query: 36 GRRGCPDRLIITP-NGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKV 84
R G PD + P IEVK P +L Q+ ++ G V+V
Sbjct: 504 NRSGLPDLIRFWPSERRYELIEVKGPGDKLQDNQIRWLQYCVSHGMPVRV 553
>gi|302187040|ref|ZP_07263713.1| hypothetical protein Psyrps6_11845 [Pseudomonas syringae pv.
syringae 642]
Length = 567
Score = 35.5 bits (81), Expect = 2.5, Method: Composition-based stats.
Identities = 16/52 (30%), Positives = 22/52 (42%), Gaps = 1/52 (1%)
Query: 36 GRRGCPDRLIITPNGGLW-WIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLV 86
R G PD + P + IEVK P RL Q+ ++ G V+V
Sbjct: 491 NRTGMPDLIQFFPEQRRYRMIEVKGPGDRLQDNQLRWLDFCAEHGMPVEVCY 542
>gi|330792612|ref|XP_003284382.1| hypothetical protein DICPUDRAFT_148139 [Dictyostelium purpureum]
gi|325085728|gb|EGC39130.1| hypothetical protein DICPUDRAFT_148139 [Dictyostelium purpureum]
Length = 1126
Score = 35.5 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 52 LWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLV 86
+ ++EVK P RL QQ I+ L G V++
Sbjct: 1088 IKFVEVKGPGDRLRDQQRVWIDLLISFGCDVELCY 1122
>gi|311106864|ref|YP_003979717.1| VRR-NUC domain-containing protein [Achromobacter xylosoxidans A8]
gi|310761553|gb|ADP17002.1| VRR-NUC domain protein [Achromobacter xylosoxidans A8]
Length = 547
Score = 35.5 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 15/50 (30%), Positives = 21/50 (42%), Gaps = 1/50 (2%)
Query: 36 GRRGCPDRLIITP-NGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKV 84
R G PD + P IEVK P +L Q+ ++ G V+V
Sbjct: 488 NRSGLPDLIRFWPSERRYELIEVKGPGDKLQDNQIRWLQYCVSHGMPVRV 537
>gi|328712823|ref|XP_003244912.1| PREDICTED: fanconi-associated nuclease 1-like [Acyrthosiphon pisum]
Length = 432
Score = 35.5 bits (81), Expect = 2.7, Method: Composition-based stats.
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Query: 39 GCPDRLII-TPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKV 84
G PD ++ ++EVK P +LS +Q S + +L G V+V
Sbjct: 362 GMPDLVVWDVFKHKCIFVEVKGPNDKLSERQYSWLLKLMEFGANVEV 408
>gi|161520780|ref|YP_001584207.1| VRR-NUC domain-containing protein [Burkholderia multivorans ATCC
17616]
gi|189353038|ref|YP_001948665.1| hypothetical protein BMULJ_04272 [Burkholderia multivorans ATCC
17616]
gi|160344830|gb|ABX17915.1| VRR-NUC domain protein [Burkholderia multivorans ATCC 17616]
gi|189337060|dbj|BAG46129.1| conserved hypothetical protein [Burkholderia multivorans ATCC
17616]
Length = 567
Score = 35.5 bits (81), Expect = 2.8, Method: Composition-based stats.
Identities = 16/52 (30%), Positives = 21/52 (40%), Gaps = 1/52 (1%)
Query: 36 GRRGCPDRLIITPN-GGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLV 86
R G PD + P+ IEVK P RL Q + G V+V+
Sbjct: 496 NRSGLPDLVRFWPDEHRYELIEVKGPGDRLQDNQTRWLAYCIAHGMPVRVVD 547
>gi|331019268|gb|EGH99324.1| hypothetical protein PLA106_24773 [Pseudomonas syringae pv.
lachrymans str. M302278PT]
Length = 568
Score = 35.5 bits (81), Expect = 2.8, Method: Composition-based stats.
Identities = 16/52 (30%), Positives = 22/52 (42%), Gaps = 1/52 (1%)
Query: 36 GRRGCPDRLIITPNGGLW-WIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLV 86
R G PD + P + IEVK P RL Q+ ++ G V+V
Sbjct: 495 NRTGMPDLIQFFPEQRGYRMIEVKGPGDRLQDNQLRWLDFCAEHGMPVEVCY 546
>gi|330967731|gb|EGH67991.1| hypothetical protein PSYAC_24423 [Pseudomonas syringae pv.
actinidiae str. M302091]
Length = 579
Score = 35.5 bits (81), Expect = 2.8, Method: Composition-based stats.
Identities = 16/52 (30%), Positives = 22/52 (42%), Gaps = 1/52 (1%)
Query: 36 GRRGCPDRLIITPNGGLW-WIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLV 86
R G PD + P + IEVK P RL Q+ ++ G V+V
Sbjct: 503 NRTGMPDLIQFFPEQRGYRMIEVKGPGDRLQDNQLRWLDFCAEHGMPVEVCY 554
>gi|301384861|ref|ZP_07233279.1| hypothetical protein PsyrptM_19600 [Pseudomonas syringae pv. tomato
Max13]
gi|302064120|ref|ZP_07255661.1| hypothetical protein PsyrptK_29402 [Pseudomonas syringae pv. tomato
K40]
gi|302130372|ref|ZP_07256362.1| hypothetical protein PsyrptN_03192 [Pseudomonas syringae pv. tomato
NCPPB 1108]
Length = 568
Score = 35.5 bits (81), Expect = 2.8, Method: Composition-based stats.
Identities = 16/52 (30%), Positives = 22/52 (42%), Gaps = 1/52 (1%)
Query: 36 GRRGCPDRLIITPNGGLW-WIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLV 86
R G PD + P + IEVK P RL Q+ ++ G V+V
Sbjct: 495 NRTGMPDLIQFFPEQRGYRMIEVKGPGDRLQDNQLRWLDFCAEHGMPVEVCY 546
>gi|213969902|ref|ZP_03398036.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1]
gi|213925450|gb|EEB59011.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1]
Length = 576
Score = 35.5 bits (81), Expect = 2.8, Method: Composition-based stats.
Identities = 16/52 (30%), Positives = 22/52 (42%), Gaps = 1/52 (1%)
Query: 36 GRRGCPDRLIITPNGGLW-WIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLV 86
R G PD + P + IEVK P RL Q+ ++ G V+V
Sbjct: 503 NRTGMPDLIQFFPEQRGYRMIEVKGPGDRLQDNQLRWLDFCAEHGMPVEVCY 554
>gi|28870436|ref|NP_793055.1| hypothetical protein PSPTO_3272 [Pseudomonas syringae pv. tomato
str. DC3000]
gi|28853683|gb|AAO56750.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato
str. DC3000]
Length = 576
Score = 35.5 bits (81), Expect = 2.8, Method: Composition-based stats.
Identities = 16/52 (30%), Positives = 22/52 (42%), Gaps = 1/52 (1%)
Query: 36 GRRGCPDRLIITPNGGLW-WIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLV 86
R G PD + P + IEVK P RL Q+ ++ G V+V
Sbjct: 503 NRTGMPDLIQFFPEQRGYRMIEVKGPGDRLQDNQLRWLDFCAEHGMPVEVCY 554
>gi|330875886|gb|EGH10035.1| hypothetical protein PSYMP_11839 [Pseudomonas syringae pv.
morsprunorum str. M302280PT]
Length = 571
Score = 35.5 bits (81), Expect = 2.8, Method: Composition-based stats.
Identities = 16/52 (30%), Positives = 22/52 (42%), Gaps = 1/52 (1%)
Query: 36 GRRGCPDRLIITPNGGLW-WIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLV 86
R G PD + P + IEVK P RL Q+ ++ G V+V
Sbjct: 495 NRTGMPDLIQFFPEQRGYRMIEVKGPGDRLQDNQLRWLDFCAEHGMPVEVCY 546
>gi|66046338|ref|YP_236179.1| hypothetical protein Psyr_3109 [Pseudomonas syringae pv. syringae
B728a]
gi|63257045|gb|AAY38141.1| conserved hypothetical protein [Pseudomonas syringae pv. syringae
B728a]
Length = 567
Score = 35.1 bits (80), Expect = 2.8, Method: Composition-based stats.
Identities = 16/52 (30%), Positives = 22/52 (42%), Gaps = 1/52 (1%)
Query: 36 GRRGCPDRLIITPNGGLW-WIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLV 86
R G PD + P + IEVK P RL Q+ ++ G V+V
Sbjct: 491 NRTGMPDLIQFFPQQRRYRMIEVKGPGDRLQDNQLRWLDFCAEHGMPVEVCY 542
>gi|254787359|ref|YP_003074788.1| VRR-NUC domain-containing protein [Teredinibacter turnerae T7901]
gi|237686823|gb|ACR14087.1| VRR-NUC domain protein [Teredinibacter turnerae T7901]
Length = 562
Score = 35.1 bits (80), Expect = 2.9, Method: Composition-based stats.
Identities = 13/36 (36%), Positives = 16/36 (44%)
Query: 35 VGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMS 70
R G PD + GG +EVK P RL Q+
Sbjct: 507 ENRNGLPDLIYFPNTGGYELVEVKGPGDRLQKNQLR 542
>gi|330982003|gb|EGH80106.1| hypothetical protein PSYAP_26164 [Pseudomonas syringae pv. aptata
str. DSM 50252]
Length = 567
Score = 35.1 bits (80), Expect = 3.0, Method: Composition-based stats.
Identities = 16/52 (30%), Positives = 22/52 (42%), Gaps = 1/52 (1%)
Query: 36 GRRGCPDRLIITPNGGLW-WIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLV 86
R G PD + P + IEVK P RL Q+ ++ G V+V
Sbjct: 491 NRTGMPDLIQFFPEQRRYRMIEVKGPGDRLQDNQLRWLDFCAEHGMPVEVCY 542
>gi|167572649|ref|ZP_02365523.1| hypothetical protein BoklC_22628 [Burkholderia oklahomensis C6786]
Length = 566
Score = 35.1 bits (80), Expect = 3.0, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Query: 36 GRRGCPDRLIITPNGGLW-WIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLV 86
R G PD + P+ + IEVK P RL Q+ ++ R V+VL
Sbjct: 498 NRSGLPDLVRFWPDARRYELIEVKGPGDRLQDNQIRWLDYCMRHRMPVRVLD 549
>gi|289672370|ref|ZP_06493260.1| hypothetical protein PsyrpsF_03945 [Pseudomonas syringae pv.
syringae FF5]
Length = 567
Score = 35.1 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 16/52 (30%), Positives = 22/52 (42%), Gaps = 1/52 (1%)
Query: 36 GRRGCPDRLIITPNGGLW-WIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLV 86
R G PD + P + IEVK P RL Q+ ++ G V+V
Sbjct: 491 NRTGMPDLIQFFPEQRRYRMIEVKGPGDRLQDNQLRWLDFCAEHGMPVEVCY 542
>gi|330897976|gb|EGH29395.1| hypothetical protein PSYJA_10633 [Pseudomonas syringae pv. japonica
str. M301072PT]
Length = 567
Score = 35.1 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 16/52 (30%), Positives = 22/52 (42%), Gaps = 1/52 (1%)
Query: 36 GRRGCPDRLIITPNGGLW-WIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLV 86
R G PD + P + IEVK P RL Q+ ++ G V+V
Sbjct: 491 NRTGMPDLIQFFPEQRRYRMIEVKGPGDRLQDNQLRWLDFCAEHGMPVEVCY 542
>gi|227534634|ref|ZP_03964683.1| phage protein [Lactobacillus paracasei subsp. paracasei ATCC 25302]
gi|227187735|gb|EEI67802.1| phage protein [Lactobacillus paracasei subsp. paracasei ATCC 25302]
Length = 108
Score = 35.1 bits (80), Expect = 3.3, Method: Composition-based stats.
Identities = 20/107 (18%), Positives = 34/107 (31%), Gaps = 14/107 (13%)
Query: 9 QTEKDVEKRLVTGAKKLDCWVRK-------------ASFVGRRGCPDRLIIT-PNGGLWW 54
++E ++ ++ + C V + + G PD I +G
Sbjct: 2 KSEHAIQSEIMLALSEHGCIVARTNVGTVRTVDGRIFNAGPPPGWPDITAIRKADGRAVL 61
Query: 55 IEVKKPTGRLSHQQMSEIEELRRRGQRVKVLVSMEEVDNFLEELACT 101
+E K GRL Q + V S ++ LE CT
Sbjct: 62 VECKNEKGRLREDQKRFAAAISGTKVIYGVCRSADDAVKLLEANKCT 108
>gi|290987483|ref|XP_002676452.1| predicted protein [Naegleria gruberi]
gi|284090054|gb|EFC43708.1| predicted protein [Naegleria gruberi]
Length = 1053
Score = 35.1 bits (80), Expect = 3.5, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 4/54 (7%)
Query: 35 VGRRGCPDRLI--ITPNGGL--WWIEVKKPTGRLSHQQMSEIEELRRRGQRVKV 84
R G PD ++ I +G E+K P +LS +Q+ I+ L + G ++V
Sbjct: 927 ENRSGMPDLILWKIQQDGKHEHLLSEIKGPGDKLSEKQIIWIDLLTKAGCSIEV 980
>gi|167565543|ref|ZP_02358459.1| hypothetical protein BoklE_23509 [Burkholderia oklahomensis EO147]
Length = 271
Score = 35.1 bits (80), Expect = 3.5, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Query: 33 SFVGRRGCPDRLIITPNGGLW-WIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLV 86
R G PD + P+ + IEVK P RL Q+ ++ R V+VL
Sbjct: 200 VCGNRSGLPDLVRFWPDARRYELIEVKGPGDRLQDNQIRWLDYCMRHRMPVRVLD 254
>gi|255505711|ref|ZP_05347722.3| conserved hypothetical protein [Bryantella formatexigens DSM 14469]
gi|255266240|gb|EET59445.1| conserved hypothetical protein [Bryantella formatexigens DSM 14469]
Length = 121
Score = 35.1 bits (80), Expect = 3.6, Method: Composition-based stats.
Identities = 25/108 (23%), Positives = 40/108 (37%), Gaps = 16/108 (14%)
Query: 3 FYSFHY--------QTEKDVEKRLVTGAKKL--DCWVRKASFVGRRGCPDRLIITPNGGL 52
F+ HY E + RL+ K L C V K+ +G PD LI+
Sbjct: 12 FFYRHYRLLEEVRNMLESKFQSRLIKDVKSLFPGCIVTKSDCNYIQGIPDLLILY-GSKW 70
Query: 53 WWIEVKKP-TGRLSHQQMSEIEELRRRGQRVKVL-VSMEEVDNFLEEL 98
+E K+ + Q ++ + + + E+V LEEL
Sbjct: 71 ATLECKQSLRAKKQPNQSYYVDRMNEMSFSRFICPENKEQV---LEEL 115
>gi|85710998|ref|ZP_01042059.1| hypothetical protein OS145_03185 [Idiomarina baltica OS145]
gi|85695402|gb|EAQ33339.1| hypothetical protein OS145_03185 [Idiomarina baltica OS145]
Length = 540
Score = 34.7 bits (79), Expect = 3.8, Method: Composition-based stats.
Identities = 14/47 (29%), Positives = 19/47 (40%), Gaps = 1/47 (2%)
Query: 36 GRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRV 82
R G PD L + + + IEVK P L Q+ + L G
Sbjct: 487 NRAGFPD-LWLYRDKQVMLIEVKGPGDTLRPNQIRWLRALNEIGVNA 532
>gi|70730563|ref|YP_260304.1| hypothetical protein PFL_3199 [Pseudomonas fluorescens Pf-5]
gi|68344862|gb|AAY92468.1| conserved hypothetical protein [Pseudomonas fluorescens Pf-5]
Length = 551
Score = 34.7 bits (79), Expect = 3.8, Method: Composition-based stats.
Identities = 13/36 (36%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Query: 36 GRRGCPDRLIITPNGGLW-WIEVKKPTGRLSHQQMS 70
R G PD + P + IEVK P RL Q+
Sbjct: 492 NRAGMPDLIQFWPEQKRYRMIEVKGPGDRLQDNQLR 527
>gi|47220527|emb|CAG05553.1| unnamed protein product [Tetraodon nigroviridis]
Length = 986
Score = 34.7 bits (79), Expect = 3.8, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 37 RRGCPDRLII-TPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKV 84
R G PD ++ T +EVK P+ RLS +Q ++EL++ G V+V
Sbjct: 924 RAGLPDLVVWNTSENTYKLVEVKGPSDRLSQKQQIWLDELQKLGADVEV 972
>gi|299532194|ref|ZP_07045588.1| hypothetical protein CTS44_15393 [Comamonas testosteroni S44]
gi|298719856|gb|EFI60819.1| hypothetical protein CTS44_15393 [Comamonas testosteroni S44]
Length = 580
Score = 34.7 bits (79), Expect = 3.9, Method: Composition-based stats.
Identities = 14/54 (25%), Positives = 20/54 (37%), Gaps = 5/54 (9%)
Query: 36 GRRGCPDRLIITP-----NGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKV 84
R G PD + P +EVK P +L Q+ + +G V V
Sbjct: 515 NRTGFPDLVRFWPLRSDAGSRYELVEVKAPGDKLQDNQIRWLAYCTEQGIPVSV 568
>gi|298253801|ref|ZP_06977390.1| hypothetical protein GV51_1089 [Gardnerella vaginalis 5-1]
gi|297532137|gb|EFH71110.1| hypothetical protein GV51_1089 [Gardnerella vaginalis 5-1]
Length = 37
Score = 34.7 bits (79), Expect = 4.1, Method: Composition-based stats.
Identities = 5/30 (16%), Positives = 16/30 (53%)
Query: 72 IEELRRRGQRVKVLVSMEEVDNFLEELACT 101
+++L+ G +V V+ ++ ++ + T
Sbjct: 1 MKDLQDLGFKVFVVDDKSQIGGVIDAIQAT 30
>gi|90961732|ref|YP_535648.1| hypothetical protein LSL_0755 [Lactobacillus phage Sal1]
gi|301300720|ref|ZP_07206905.1| conserved hypothetical protein [Lactobacillus salivarius
ACS-116-V-Col5a]
gi|90820926|gb|ABD99565.1| Hypothetical protein, phage associated [Lactobacillus phage Sal1]
gi|300851658|gb|EFK79357.1| conserved hypothetical protein [Lactobacillus salivarius
ACS-116-V-Col5a]
Length = 137
Score = 34.7 bits (79), Expect = 4.1, Method: Composition-based stats.
Identities = 25/106 (23%), Positives = 37/106 (34%), Gaps = 17/106 (16%)
Query: 11 EKDVEKRL------------VTGAKKLDCWVRKASFVGRR--GCPDRLIITPNGGLWWIE 56
EK VEK L K + W K G + G PD LI NG IE
Sbjct: 8 EKKVEKYLESQGIYQNNTKKQDKTIKDNGWFFKVWGGGFQSGGIPD-LICNINGFFLSIE 66
Query: 57 VKKPTGRLSHQQMSEIEELRRRGQRVKVLV--SMEEVDNFLEELAC 100
+K G+ S Q+ + + + +L + +E +
Sbjct: 67 LKDIRGQPSELQIRNTKLINQTNGIGLILYPQGFDTFKKIVEVMLA 112
>gi|187933743|ref|YP_001886469.1| VRR-NUC domain protein [Clostridium botulinum B str. Eklund 17B]
gi|187721896|gb|ACD23117.1| VRR-NUC domain protein [Clostridium botulinum B str. Eklund 17B]
Length = 129
Score = 34.7 bits (79), Expect = 4.3, Method: Composition-based stats.
Identities = 16/62 (25%), Positives = 25/62 (40%), Gaps = 6/62 (9%)
Query: 38 RGCPDRLIITPNGGLWW----IEVKKPTGRLSHQQMSEIEELRRRGQRVKVLVSMEEVDN 93
G PD ++ P G + IE+K + S Q I +L+ + V+V E
Sbjct: 51 AGVPD--VVLPCGRGGYFGLYIELKVGKNKTSDNQKQWIRDLKEQNYLVEVCYGWREAAE 108
Query: 94 FL 95
L
Sbjct: 109 VL 110
>gi|256851384|ref|ZP_05556773.1| VRR-NUC domain-containing protein [Lactobacillus jensenii 27-2-CHN]
gi|260660808|ref|ZP_05861723.1| VRR-NUC domain-containing protein [Lactobacillus jensenii
115-3-CHN]
gi|260664089|ref|ZP_05864942.1| VRR-NUC domain-containing protein [Lactobacillus jensenii SJ-7A-US]
gi|282933167|ref|ZP_06338554.1| phage protein [Lactobacillus jensenii 208-1]
gi|256616446|gb|EEU21634.1| VRR-NUC domain-containing protein [Lactobacillus jensenii 27-2-CHN]
gi|260548530|gb|EEX24505.1| VRR-NUC domain-containing protein [Lactobacillus jensenii
115-3-CHN]
gi|260561975|gb|EEX27944.1| VRR-NUC domain-containing protein [Lactobacillus jensenii SJ-7A-US]
gi|281302671|gb|EFA94886.1| phage protein [Lactobacillus jensenii 208-1]
Length = 118
Score = 34.7 bits (79), Expect = 4.3, Method: Composition-based stats.
Identities = 20/83 (24%), Positives = 34/83 (40%), Gaps = 11/83 (13%)
Query: 19 VTGAKKLDCWVRKASFVGR-RGCPD----RLIITPNGGLWWIEVKKPTGRLSHQQMSEIE 73
V K+ D G G PD R I + ++IEVK PTG++ QM +
Sbjct: 28 VGSVKQADGR---WFSTGLPNGYPDLHGTRWI---DNQSYFIEVKSPTGKIRDDQMRFHQ 81
Query: 74 ELRRRGQRVKVLVSMEEVDNFLE 96
L + + S+++ ++
Sbjct: 82 FLMQHNVIHGIARSVDDAKMIIQ 104
>gi|66828121|ref|XP_647415.1| myotubularin related protein 15 [Dictyostelium discoideum AX4]
gi|74859362|sp|Q55FW8|FAN1_DICDI RecName: Full=Fanconi-associated nuclease 1 homolog; AltName:
Full=Protein MTMR15 homolog
gi|60475476|gb|EAL73411.1| myotubularin related protein 15 [Dictyostelium discoideum AX4]
Length = 1087
Score = 34.7 bits (79), Expect = 4.5, Method: Composition-based stats.
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 52 LWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKV 84
+ ++EVK RL QQ I+ L G V+V
Sbjct: 1047 IKFVEVKGTGDRLRDQQRIWIDMLISFGCDVEV 1079
>gi|167584470|ref|ZP_02376858.1| hypothetical protein BuboB_03986 [Burkholderia ubonensis Bu]
Length = 224
Score = 34.3 bits (78), Expect = 4.9, Method: Composition-based stats.
Identities = 16/52 (30%), Positives = 20/52 (38%), Gaps = 1/52 (1%)
Query: 36 GRRGCPDRLIITP-NGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLV 86
R G PD + P IEVK P RL Q + G V+V+
Sbjct: 155 NRSGLPDLVRFWPAERRYELIEVKGPGDRLQDNQTRWLGFCIGHGMPVRVVD 206
>gi|37222094|gb|AAP76490.1| Uvs005 [uncultured bacterium]
Length = 555
Score = 34.3 bits (78), Expect = 5.0, Method: Composition-based stats.
Identities = 13/36 (36%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Query: 36 GRRGCPDRLIITPNGGLW-WIEVKKPTGRLSHQQMS 70
R G PD + P + IEVK P RL Q+
Sbjct: 496 NRAGMPDLIQFWPLQKTYRMIEVKGPGDRLQDNQLR 531
>gi|107101298|ref|ZP_01365216.1| hypothetical protein PaerPA_01002332 [Pseudomonas aeruginosa PACS2]
Length = 559
Score = 34.3 bits (78), Expect = 5.0, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 24/61 (39%), Gaps = 2/61 (3%)
Query: 35 VGRR-GCPDRLIITP-NGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLVSMEEVD 92
G R G PD + P +EVK P RL Q+ ++ R V V VD
Sbjct: 499 PGNRAGLPDLIQFWPAQRRYRMVEVKGPGDRLQDNQLRWLQFCCEREMPVAVCYVRWHVD 558
Query: 93 N 93
+
Sbjct: 559 D 559
>gi|88807659|ref|ZP_01123171.1| primosomal protein N' (replication factor Y) [Synechococcus sp. WH
7805]
gi|88788873|gb|EAR20028.1| primosomal protein N' (replication factor Y) [Synechococcus sp. WH
7805]
Length = 762
Score = 34.3 bits (78), Expect = 5.0, Method: Composition-based stats.
Identities = 11/45 (24%), Positives = 20/45 (44%), Gaps = 4/45 (8%)
Query: 34 FVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRR 78
++G+RG P +P LWW+E+ + G + + L
Sbjct: 123 WLGQRGQP----ASPGRKLWWVELTRTPGDPHPKAARQHALLENL 163
>gi|224368290|ref|YP_002602453.1| hypothetical protein HRM2_11770 [Desulfobacterium autotrophicum
HRM2]
gi|223691006|gb|ACN14289.1| hypothetical protein HRM2_11770 [Desulfobacterium autotrophicum
HRM2]
Length = 331
Score = 34.3 bits (78), Expect = 5.1, Method: Composition-based stats.
Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Query: 37 RRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRR 77
R+G PD L I +G + ++EVK P + Q + I ++
Sbjct: 275 RKGWPD-LTIWKDGEVKFLEVKSPNDTMRKSQETIISKIMN 314
>gi|182418913|ref|ZP_02950170.1| PmgM [Clostridium butyricum 5521]
gi|237669030|ref|ZP_04529014.1| VRR-NUC domain protein [Clostridium butyricum E4 str. BoNT E
BL5262]
gi|182377196|gb|EDT74764.1| PmgM [Clostridium butyricum 5521]
gi|237657378|gb|EEP54934.1| VRR-NUC domain protein [Clostridium butyricum E4 str. BoNT E
BL5262]
Length = 130
Score = 34.3 bits (78), Expect = 5.2, Method: Composition-based stats.
Identities = 16/64 (25%), Positives = 28/64 (43%), Gaps = 6/64 (9%)
Query: 38 RGCPDRLIITPNGGLWW----IEVKKPTGRLSHQQMSEIEELRRRGQRVKVLVSMEEVDN 93
G PD I+ P G + IE+K + + +Q I+ L+ V+V E +
Sbjct: 51 AGVPD--IVLPVGRGGYFGLYIELKTGKNKTTVKQQGWIKRLKDNNYCVEVCYGWIEARD 108
Query: 94 FLEE 97
+E+
Sbjct: 109 VVEK 112
>gi|258576347|ref|XP_002542355.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237902621|gb|EEP77022.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 838
Score = 34.3 bits (78), Expect = 5.5, Method: Composition-based stats.
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Query: 39 GCPDRLII-TPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRV 82
G PD + T + ++EVK P RLS Q I L G +V
Sbjct: 780 GVPDLFLWSTEKSEVMFVEVKSPNDRLSDSQRLWIHVLTGAGIKV 824
>gi|88800504|ref|ZP_01116067.1| hypothetical protein MED297_04834 [Reinekea sp. MED297]
gi|88776735|gb|EAR07947.1| hypothetical protein MED297_04834 [Reinekea sp. MED297]
Length = 539
Score = 34.3 bits (78), Expect = 5.6, Method: Composition-based stats.
Identities = 16/50 (32%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Query: 37 RRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLV 86
R G PD L G +IE+K P +L Q++ + R G VL
Sbjct: 482 RSGFPD-LFQAHEGQHRFIEIKGPGDKLQDNQIAWLTVFARLGIPADVLY 530
>gi|56750814|ref|YP_171515.1| hypothetical protein syc0805_c [Synechococcus elongatus PCC 6301]
gi|81299537|ref|YP_399745.1| hypothetical protein Synpcc7942_0726 [Synechococcus elongatus PCC
7942]
gi|56685773|dbj|BAD78995.1| hypothetical protein [Synechococcus elongatus PCC 6301]
gi|81168418|gb|ABB56758.1| conserved hypothetical protein [Synechococcus elongatus PCC 7942]
Length = 120
Score = 34.3 bits (78), Expect = 5.7, Method: Composition-based stats.
Identities = 17/41 (41%), Positives = 27/41 (65%)
Query: 55 IEVKKPTGRLSHQQMSEIEELRRRGQRVKVLVSMEEVDNFL 95
IEVK PTGR++ +Q S I+ ++R G R V SM++ + +
Sbjct: 74 IEVKTPTGRVTPEQQSFIDFVQRSGGRAGVARSMQDANKII 114
>gi|22296559|ref|NP_680519.1| hypothetical protein A2p40 [Lactobacillus phage A2]
gi|6599328|emb|CAB63674.1| hypothetical protein [Lactobacillus phage A2]
Length = 97
Score = 34.3 bits (78), Expect = 5.7, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 24/53 (45%)
Query: 49 NGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLVSMEEVDNFLEELACT 101
+G L IEVK GRL +Q E ++R V S ++ LE CT
Sbjct: 45 DGRLILIEVKNEKGRLRPEQKHFAEFIQRFPVIYGVCRSADDAVKLLEANKCT 97
>gi|148241376|ref|YP_001226533.1| hypothetical protein SynRCC307_0277 [Synechococcus sp. RCC307]
gi|147849686|emb|CAK27180.1| Conserved hypothetical protein [Synechococcus sp. RCC307]
Length = 151
Score = 34.3 bits (78), Expect = 6.0, Method: Composition-based stats.
Identities = 14/66 (21%), Positives = 22/66 (33%), Gaps = 17/66 (25%)
Query: 21 GAKKLDCWVRKASF---------VGRRGCPDRLIITPNG-GLWWIEVK-------KPTGR 63
G + + G G PDRL P G G+ ++V+ +
Sbjct: 86 GVSSVGGVAQAFVSYGSYSGPVAPGDVGDPDRLPWLPTGVGVAGVDVQRGRLLLERDGRP 145
Query: 64 LSHQQM 69
LS Q+
Sbjct: 146 LSPLQL 151
>gi|291560630|emb|CBL39430.1| VRR-NUC domain [butyrate-producing bacterium SSC/2]
Length = 151
Score = 34.3 bits (78), Expect = 6.2, Method: Composition-based stats.
Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
Query: 38 RGCPDRLIITPNGGLW--WIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLVSMEEVDNFL 95
G PD + P G +IE+K GRL +Q +++ G V V S E +
Sbjct: 62 AGVPDLHLPVPKGQYASLYIEMKYGDGRLQKEQKEFLKQAADYGNFVAVCYSQEIALKVI 121
Query: 96 EE 97
E+
Sbjct: 122 ED 123
>gi|326201158|ref|ZP_08191030.1| VRR-NUC domain-containing protein [Clostridium papyrosolvens DSM
2782]
gi|325988726|gb|EGD49550.1| VRR-NUC domain-containing protein [Clostridium papyrosolvens DSM
2782]
Length = 601
Score = 34.3 bits (78), Expect = 6.3, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Query: 33 SFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRV 82
R G PD L+ + L+ EVK +LS Q + I+ L G RV
Sbjct: 198 ISENRSGLPDLLV-YNDSILFMSEVKSEKDKLSEGQKNWIDFLESTGIRV 246
>gi|301610854|ref|XP_002934961.1| PREDICTED: coiled-coil domain-containing protein MTMR15-like
[Xenopus (Silurana) tropicalis]
Length = 865
Score = 33.9 bits (77), Expect = 6.4, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 39 GCPDRLIITPNGGLW-WIEVKKPTGRLSHQQMSEIEELRRRGQRVKV 84
G PD ++ + +EVK P RLSH+Q+ + EL++ G V+V
Sbjct: 805 GLPDLVVWNGQTKQYKLVEVKGPNDRLSHKQIIWLHELQKLGASVEV 851
>gi|52424949|ref|YP_088086.1| putative RNA 2'-O-ribose methyltransferase [Mannheimia
succiniciproducens MBEL55E]
gi|81387245|sp|Q65U59|RLMM_MANSM RecName: Full=Ribosomal RNA large subunit methyltransferase M;
AltName: Full=23S rRNA 2'-O-ribose methyltransferase
rlmM
gi|52307001|gb|AAU37501.1| unknown [Mannheimia succiniciproducens MBEL55E]
Length = 363
Score = 33.9 bits (77), Expect = 6.4, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 25/60 (41%), Gaps = 6/60 (10%)
Query: 2 SFYSFHYQTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPT 61
S + H TE VE AK+L + RK + P R + G L + EVKK
Sbjct: 98 SLVNLHRTTELFVETADTNEAKELSVFCRKFT------VPLRQALKKQGYLAFKEVKKSG 151
>gi|262047922|ref|ZP_06020867.1| VRR-NUC domain-containing protein [Lactobacillus crispatus
MV-3A-US]
gi|260571775|gb|EEX28351.1| VRR-NUC domain-containing protein [Lactobacillus crispatus
MV-3A-US]
Length = 112
Score = 33.9 bits (77), Expect = 6.6, Method: Composition-based stats.
Identities = 23/105 (21%), Positives = 43/105 (40%), Gaps = 20/105 (19%)
Query: 9 QTEKDVEKRLVTGAKKLDCWVR-----KASFV-GR-------RGCPD----RLIITPNGG 51
++E ++K++ + C V K GR G PD R + +G
Sbjct: 2 ESEHSIQKKIELALSQHQCHVFRANVGKIRTPDGRFFTTGLPSGYPDLHGFRNV---DGK 58
Query: 52 LWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLVSMEEVDNFLE 96
+++IEVK TG+L Q++ L V S+++ ++
Sbjct: 59 MFYIEVKTKTGKLRDDQIAFHNMLMSYNIIHGVARSVKDALMIVD 103
>gi|156543241|ref|XP_001606613.1| PREDICTED: hypothetical protein [Nasonia vitripennis]
Length = 802
Score = 33.9 bits (77), Expect = 6.7, Method: Composition-based stats.
Identities = 17/64 (26%), Positives = 28/64 (43%), Gaps = 8/64 (12%)
Query: 27 CWVRKASF---VGRRGCPDRLI---ITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQ 80
+ + R G PD ++ +T + +EVK P LS +Q ++ L R G
Sbjct: 728 GICERLVSNFRLWRSGFPDLILWNSLTAKCKI--VEVKGPGDTLSEKQKLWLQYLERLGI 785
Query: 81 RVKV 84
V+V
Sbjct: 786 DVEV 789
>gi|328780642|ref|XP_393358.4| PREDICTED: matrix metalloproteinase-14-like [Apis mellifera]
Length = 575
Score = 33.9 bits (77), Expect = 6.7, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 17/36 (47%), Gaps = 4/36 (11%)
Query: 23 KKLDCWVRKASFVGRRGCPDRL----IITPNGGLWW 54
KK+D K G G PD + + T NG L++
Sbjct: 381 KKMDGDYPKEISEGFTGIPDNIDTVTVWTGNGKLYF 416
>gi|239638086|ref|ZP_04679045.1| gp51 protein [Staphylococcus warneri L37603]
gi|239596369|gb|EEQ78907.1| gp51 protein [Staphylococcus warneri L37603]
Length = 103
Score = 33.9 bits (77), Expect = 7.1, Method: Composition-based stats.
Identities = 19/101 (18%), Positives = 41/101 (40%), Gaps = 13/101 (12%)
Query: 9 QTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLI-ITP------------NGGLWWI 55
TE+ ++ ++ K + +A+ +R+I + P +G I
Sbjct: 1 MTEQQIQNEIILAINKRGHRLWRANAGKIVTKDNRIIKLLPKGFPDTFGYRKSDGKFIAI 60
Query: 56 EVKKPTGRLSHQQMSEIEELRRRGQRVKVLVSMEEVDNFLE 96
EVK G+L +Q+ E ++ + V S+++ +E
Sbjct: 61 EVKTEKGKLRSEQIKFKEFIKTQNVLYGVARSVDDAIKIVE 101
>gi|317120880|ref|YP_004100883.1| VRR-NUC domain-containing protein [Thermaerobacter marianensis DSM
12885]
gi|315590860|gb|ADU50156.1| VRR-NUC domain-containing protein [Thermaerobacter marianensis DSM
12885]
Length = 146
Score = 33.9 bits (77), Expect = 7.3, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 29/67 (43%), Gaps = 6/67 (8%)
Query: 39 GCPDRLII-----TPNGGLWWIEVKK-PTGRLSHQQMSEIEELRRRGQRVKVLVSMEEVD 92
G PD LI P+ +E+K+ GRL+ Q +E LR RG V +E
Sbjct: 74 GVPDLLIFDPPPAAPDRRGVALELKRRQGGRLTEPQRQWLEALRARGWYATVCRGADEAI 133
Query: 93 NFLEELA 99
LE L
Sbjct: 134 ETLERLG 140
>gi|154491974|ref|ZP_02031600.1| hypothetical protein PARMER_01604 [Parabacteroides merdae ATCC
43184]
gi|154088215|gb|EDN87260.1| hypothetical protein PARMER_01604 [Parabacteroides merdae ATCC
43184]
Length = 688
Score = 33.9 bits (77), Expect = 7.3, Method: Composition-based stats.
Identities = 14/69 (20%), Positives = 33/69 (47%), Gaps = 14/69 (20%)
Query: 44 LIITPNG-------GLWWIEVKKPTGRLSHQQMSEIEEL-------RRRGQRVKVLVSME 89
+I+ P G + ++E + +L+ +Q EI EL + G+++ V+ +
Sbjct: 391 IIMIPLGKQHLLDRRVEFVEPESDLVKLNARQKEEIAELIHVIPQKKETGKKLLVIDDSD 450
Query: 90 EVDNFLEEL 98
++ FL+ +
Sbjct: 451 QIRWFLKHV 459
>gi|300741872|ref|ZP_07071893.1| helicase, UvrD/Rep family [Rothia dentocariosa M567]
gi|300381057|gb|EFJ77619.1| helicase, UvrD/Rep family [Rothia dentocariosa M567]
Length = 1172
Score = 33.9 bits (77), Expect = 7.7, Method: Composition-based stats.
Identities = 10/41 (24%), Positives = 19/41 (46%)
Query: 42 DRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRV 82
DRL T +G +++K + + Q++E +L V
Sbjct: 1012 DRLEKTEDGRYVIVDLKTGKTKPNKNQIAEHAQLAAYQVAV 1052
>gi|311111763|ref|YP_003982985.1| UvrD/REP helicase family protein [Rothia dentocariosa ATCC 17931]
gi|310943257|gb|ADP39551.1| UvrD/REP helicase family protein [Rothia dentocariosa ATCC 17931]
Length = 1172
Score = 33.9 bits (77), Expect = 7.7, Method: Composition-based stats.
Identities = 10/41 (24%), Positives = 19/41 (46%)
Query: 42 DRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRV 82
DRL T +G +++K + + Q++E +L V
Sbjct: 1012 DRLEKTEDGRYVIVDLKTGKTKPNKNQIAEHAQLAAYQVAV 1052
>gi|91087593|ref|XP_972078.1| PREDICTED: similar to Sema-1a CG18405-PA [Tribolium castaneum]
Length = 1326
Score = 33.9 bits (77), Expect = 8.0, Method: Composition-based stats.
Identities = 14/49 (28%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Query: 37 RRGCPDRLII-TPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKV 84
+ G PD ++ G ++EVK +LS +Q + L G V+V
Sbjct: 502 QSGFPDLIVWNVEEGRAKFVEVKGENDKLSIKQKLWLNYLCDSGASVEV 550
>gi|218297123|ref|ZP_03497794.1| N-6 DNA methylase [Thermus aquaticus Y51MC23]
gi|218242537|gb|EED09075.1| N-6 DNA methylase [Thermus aquaticus Y51MC23]
Length = 1214
Score = 33.5 bits (76), Expect = 8.3, Method: Composition-based stats.
Identities = 14/49 (28%), Positives = 21/49 (42%), Gaps = 2/49 (4%)
Query: 41 PDRLIIT-PNGGLWW-IEVKKPTGRLSHQQMSEIEELRRRGQRVKVLVS 87
PD L+ P G ++ +E K L+ Q +RR G VL +
Sbjct: 76 PDWLVCLEPGGAPYFLVEDKATGEDLAAHQEQLFRYMRRLGVPRGVLTN 124
>gi|307195664|gb|EFN77506.1| Coiled-coil domain-containing protein MTMR15 [Harpegnathos
saltator]
Length = 459
Score = 33.5 bits (76), Expect = 8.8, Method: Composition-based stats.
Identities = 14/50 (28%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Query: 38 RGCPDRLIITPNGGLW-WIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLV 86
G PD ++ P+ + +EVK P LS +Q ++ L + G +V
Sbjct: 393 AGFPDLIVWNPHTKQYKIVEVKGPGDSLSTKQKLWLQYLNQLGLNTEVCY 442
>gi|227528974|ref|ZP_03959023.1| phage protein [Lactobacillus vaginalis ATCC 49540]
gi|227351111|gb|EEJ41402.1| phage protein [Lactobacillus vaginalis ATCC 49540]
Length = 119
Score = 33.5 bits (76), Expect = 8.9, Method: Composition-based stats.
Identities = 9/49 (18%), Positives = 22/49 (44%)
Query: 49 NGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRVKVLVSMEEVDNFLEE 97
NG ++++E+K G+ Q+ L + S+++ ++E
Sbjct: 56 NGKVFYLEIKNAKGKPRQDQIRFHHMLTSHNIIHGIARSVDDALKIVDE 104
>gi|46255152|ref|YP_006064.1| ATPase [Thermus thermophilus HB27]
gi|46198001|gb|AAS82411.1| probable ATPase [Thermus thermophilus HB27]
Length = 308
Score = 33.5 bits (76), Expect = 8.9, Method: Composition-based stats.
Identities = 12/46 (26%), Positives = 19/46 (41%), Gaps = 3/46 (6%)
Query: 42 DRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRG-QRVKVLV 86
D +++ P G LW +EVK+ E L+ Q V+
Sbjct: 238 DLVLLLPGGRLWAVEVKR-GLDPRPS-RGFHEALKDLKPQEAFVIY 281
>gi|75759376|ref|ZP_00739472.1| Hypothetical cytosolic protein [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|74493143|gb|EAO56263.1| Hypothetical cytosolic protein [Bacillus thuringiensis serovar
israelensis ATCC 35646]
Length = 94
Score = 33.5 bits (76), Expect = 9.2, Method: Composition-based stats.
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 33 SFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSEIEELRRRGQRV 82
+ G R D L+ TP G L +EVK R + Q+ + + +R++G ++
Sbjct: 22 TSKGIRRV-DHLVRTPRGKLLAVEVKAGNARRTAMQLKKDKLMRKQGGKI 70
>gi|148272376|ref|YP_001221937.1| putative ATP-dependent DNA helicase/nuclease [Clavibacter
michiganensis subsp. michiganensis NCPPB 382]
gi|147830306|emb|CAN01240.1| putative ATP-dependant DNA helicase/nuclease [Clavibacter
michiganensis subsp. michiganensis NCPPB 382]
Length = 1089
Score = 33.5 bits (76), Expect = 9.6, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 31/82 (37%), Gaps = 1/82 (1%)
Query: 12 KDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGRLSHQQMSE 71
+D E R + + RG DR+ +T G + +++K + ++
Sbjct: 929 RDFEARGGRMLAAEGGFELEVGVARLRGKIDRIELTEEGQVVIVDLKTGRHFPTRAEIPA 988
Query: 72 IEELRRRGQRVKVLVSMEEVDN 93
+L Q V S+E+V
Sbjct: 989 HAQLGSY-QLAYVEGSLEQVPA 1009
Database: nr
Posted date: May 13, 2011 4:10 AM
Number of letters in database: 999,999,932
Number of sequences in database: 2,987,209
Database: /data/usr2/db/fasta/nr.01
Posted date: May 13, 2011 4:17 AM
Number of letters in database: 999,998,956
Number of sequences in database: 2,896,973
Database: /data/usr2/db/fasta/nr.02
Posted date: May 13, 2011 4:23 AM
Number of letters in database: 999,999,979
Number of sequences in database: 2,907,862
Database: /data/usr2/db/fasta/nr.03
Posted date: May 13, 2011 4:29 AM
Number of letters in database: 999,999,513
Number of sequences in database: 2,932,190
Database: /data/usr2/db/fasta/nr.04
Posted date: May 13, 2011 4:33 AM
Number of letters in database: 792,586,372
Number of sequences in database: 2,260,650
Lambda K H
0.318 0.170 0.535
Lambda K H
0.267 0.0520 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,465,461,975
Number of Sequences: 13984884
Number of extensions: 124911000
Number of successful extensions: 295502
Number of sequences better than 10.0: 542
Number of HSP's better than 10.0 without gapping: 522
Number of HSP's successfully gapped in prelim test: 239
Number of HSP's that attempted gapping in prelim test: 294825
Number of HSP's gapped (non-prelim): 766
length of query: 103
length of database: 4,792,584,752
effective HSP length: 72
effective length of query: 31
effective length of database: 3,785,673,104
effective search space: 117355866224
effective search space used: 117355866224
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.3 bits)
S2: 76 (33.5 bits)