HHsearch alignment for GI: 254780129 and conserved domain: COG2812
>COG2812 DnaX DNA polymerase III, gamma/tau subunits [DNA replication, recombination, and repair].
Probab=96.80 E-value=0.0082 Score=35.31 Aligned_cols=55 Identities=15% Similarity=0.100 Sum_probs=36.4
Q ss_pred CCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCC-HHHHHHHHH
Q ss_conf 02472000025122013654332036999999985137987998316532488-899999999
Q gi|254780129|r 116 DHWDFATIVVDESTKLKSFRTHQGTKQTRALGKVAFSKVKRFIELTGTPSPNG-LIDLWGQIW 177 (220)
Q Consensus 116 ~~~~~~~iIiDEaH~~kn~~~~~~~k~~k~l~~~~~~~~~~~l~LTgTPi~n~-~~el~~ll~ 177 (220)
T Consensus 116 ~~~ryKVyiIDEvHML-------S~~afNALLKTLEEPP~hV~FIlATTe~~Kip~TIlSRcq 171 (515)
T COG2812 116 SEGRYKVYIIDEVHML-------SKQAFNALLKTLEEPPSHVKFILATTEPQKIPNTILSRCQ 171 (515)
T ss_pred CCCCCEEEEEECHHHH-------HHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCHHHHHCCC
T ss_conf 6666418998318764-------3788888751113686674899853886768404552122