HHsearch alignment for GI: 254780129 and conserved domain: COG3973
>COG3973 Superfamily I DNA and RNA helicases [General function prediction only].
Probab=94.96 E-value=0.041 Score=31.30 Aligned_cols=57 Identities=23% Similarity=0.338 Sum_probs=34.1
Q ss_pred CCHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHC-----CCCCEEEEECCCCCHH
Q ss_conf 348999999999967981999689998899999999999740-----8994899723310137
Q gi|254780129|r 5 LKPHQIVMVNWLLSHDRCALWASMGSGKTVSVLFALSTIKIL-----DPRPVLIIAPLRVAQY 62 (220)
Q Consensus 5 Lrp~Q~~a~~~~~~~~~~~l~~~~G~GKT~~ai~~~~~~~~~-----~~~~~LIi~P~s~~~~ 62 (220)
T Consensus 213 IQkEQneIIR~e-k~~ilVVQGaAGSGKTtiALHRvAyLlY~~R~~l~~k~vlvl~PN~vFle 274 (747)
T COG3973 213 IQKEQNEIIRFE-KNKILVVQGAAGSGKTTIALHRVAYLLYGYRGPLQAKPVLVLGPNRVFLE 274 (747)
T ss_pred HHHHHHHHHHCC-CCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEECCCHHHHH
T ss_conf 617677787555-78748995588887135889999999853566246686599828389999