HHsearch alignment for GI: 254780129 and conserved domain: KOG0334

Probab=98.18  E-value=6.8e-06  Score=53.00  Aligned_cols=128  Identities=23%  Similarity=0.261  Sum_probs=85.2

Q ss_pred             CCCHHHHHHHHHHHHCCCCEEEECCCCCHHHHH-HHHHHHHHH-----CCCCC-EEEEECCCCCHHHHHHHHHHHCCCCC
Q ss_conf             134899999999996798199968999889999-999999974-----08994-89972331013788999985155346
Q gi|254780129|r    4 VLKPHQIVMVNWLLSHDRCALWASMGSGKTVSV-LFALSTIKI-----LDPRP-VLIIAPLRVAQYVWKDEVERWSAFSD   76 (220)
Q Consensus         4 ~Lrp~Q~~a~~~~~~~~~~~l~~~~G~GKT~~a-i~~~~~~~~-----~~~~~-~LIi~P~s~~~~~W~~e~~~~~~~~~   76 (220)
T Consensus       387 k~~~IQ~qAiP~ImsGrdvIgvakTgSGKT~af~LPmirhi~dQr~~~~gdGPi~li~aPtrela~QI~r~~~kf~k~l~  466 (997)
T KOG0334         387 KPTPIQAQAIPAIMSGRDVIGVAKTGSGKTLAFLLPMIRHIKDQRPLEEGDGPIALILAPTRELAMQIHREVRKFLKLLG  466 (997)
T ss_pred             CCCCHHHHHCCHHCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCC
T ss_conf             98755664301222577458773268862034421155542047971107886479973777899999999999877417


Q ss_pred             CEEEEEECCCC--CCCCCCCCCCCEEEECHHHHHCCCCC----CCCCCCCCCCCCCHHHCC
Q ss_conf             06998611210--11223456766278656673100000----000247200002512201
Q gi|254780129|r   77 MTVSSLIGSER--QRIKALNTPAHLYIINFENIPWLVKM----KLDHWDFATIVVDESTKL  131 (220)
Q Consensus        77 ~~~~~~~~~~~--~~~~~~~~~~~~~i~~~~~l~~~~~~----~~~~~~~~~iIiDEaH~~  131 (220)
T Consensus       467 ir~v~vygg~~~~~qiaelkRg~eIvV~tpGRmiD~l~~n~grvtnlrR~t~lv~deaDrm  527 (997)
T KOG0334         467 IRVVCVYGGSGISQQIAELKRGAEIVVCTPGRMIDILCANSGRVTNLRRVTYLVLDEADRM  527 (997)
T ss_pred             CEEEEECCCCCHHHHHHHHHCCCCEEEECCCHHHHHHHHCCCCCCCCCCCCEEEECHHHHH
T ss_conf             6279842785188789998678965996450323366615776233101103554112354