HHsearch alignment for GI: 254780129 and conserved domain: KOG0335

Probab=98.87  E-value=4.3e-09  Score=71.37  Aligned_cols=159  Identities=16%  Similarity=0.185  Sum_probs=106.6

Q ss_pred             CCCCHHHHHHHHHHHHCCCCEEEECCCCCHHHHHH-HHHHHHHHCC-----------CCCEEEEECCCCCHHHHHHHHHH
Q ss_conf             71348999999999967981999689998899999-9999997408-----------99489972331013788999985
Q gi|254780129|r    3 LVLKPHQIVMVNWLLSHDRCALWASMGSGKTVSVL-FALSTIKILD-----------PRPVLIIAPLRVAQYVWKDEVER   70 (220)
Q Consensus         3 ~~Lrp~Q~~a~~~~~~~~~~~l~~~~G~GKT~~ai-~~~~~~~~~~-----------~~~~LIi~P~s~~~~~W~~e~~~   70 (220)
T Consensus        95 ~~ptpvQk~sip~i~~GrdlmacAqTGsGKT~aFLiPii~~~~~~~~~~~~~~~~~~~P~~lIlapTReL~~Qi~nea~k  174 (482)
T KOG0335          95 TKPTPVQKYSIPIISGGRDLMACAQTGSGKTAAFLIPIISYLLDEGPEDRGESGGGVYPRALILAPTRELVDQIYNEARK  174 (482)
T ss_pred             CCCCCCEECCCCEEECCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHH
T ss_conf             68986156042244258842788257885137888889999986486566656778897259981737876678888876


Q ss_pred             HCCCCCCEEEEEECCCC--CCCCCCCCCCCEEEECHHHHHCCCCCC-CCCCCCCCCCCCHHHCCCC-CCCCCHHHHHHHH
Q ss_conf             15534606998611210--112234567662786566731000000-0024720000251220136-5433203699999
Q gi|254780129|r   71 WSAFSDMTVSSLIGSER--QRIKALNTPAHLYIINFENIPWLVKMK-LDHWDFATIVVDESTKLKS-FRTHQGTKQTRAL  146 (220)
Q Consensus        71 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~i~~~~~l~~~~~~~-~~~~~~~~iIiDEaH~~kn-~~~~~~~k~~k~l  146 (220)
T Consensus       175 ~~~~s~~~~~~~ygg~~~~~q~~~~~~gcdIlvaTpGrL~d~~e~g~i~l~~~k~~vLDEADrMlD~mgF--~p~Ir~Iv  252 (482)
T KOG0335         175 FSYLSGMKSVVVYGGTDLGAQLRFIKRGCDILVATPGRLKDLIERGKISLDNCKFLVLDEADRMLDEMGF--EPQIRKIV  252 (482)
T ss_pred             HCCCCCCEEEEEECCCCHHHHHHHHCCCCCEEEECCCHHHHHHHCCEEEHHHCCEEEECCHHHHHHHCCC--CHHHHHHH
T ss_conf             4022122033005784454422333257557885575056455415112623858995236776663266--62079996


Q ss_pred             HHHHHC--CCCEEEEECCC
Q ss_conf             998513--79879983165
Q gi|254780129|r  147 GKVAFS--KVKRFIELTGT  163 (220)
Q Consensus       147 ~~~~~~--~~~~~l~LTgT  163 (220)
T Consensus       253 ~~~~~~~~~~~qt~mFSAt  271 (482)
T KOG0335         253 EQLGMPPKNNRQTLLFSAT  271 (482)
T ss_pred             CCCCCCCCCCEEEEEEECC
T ss_conf             2558887466137887355