HHsearch alignment for GI: 254780129 and conserved domain: KOG0345

>KOG0345 consensus.
Probab=98.63  E-value=3.9e-07  Score=60.16  Aligned_cols=131  Identities=21%  Similarity=0.343  Sum_probs=84.1

Q ss_pred             CCCHHHHHHHHHHHHCCCCEEEECCCCCHHHHHH-HHHHHH--HHCC--CC--CEEEEECCCCCHHHHHHHHHHHCC-CC
Q ss_conf             1348999999999967981999689998899999-999999--7408--99--489972331013788999985155-34
Q gi|254780129|r    4 VLKPHQIVMVNWLLSHDRCALWASMGSGKTVSVL-FALSTI--KILD--PR--PVLIIAPLRVAQYVWKDEVERWSA-FS   75 (220)
Q Consensus         4 ~Lrp~Q~~a~~~~~~~~~~~l~~~~G~GKT~~ai-~~~~~~--~~~~--~~--~~LIi~P~s~~~~~W~~e~~~~~~-~~   75 (220)
T Consensus        28 ~mTpVQa~tIPlll~~KDVvveavTGSGKTlAFllP~le~i~rr~~~~~~~~vgalIIsPTRELa~QI~~V~~~F~~~l~  107 (567)
T KOG0345          28 KMTPVQAATIPLLLKNKDVVVEAVTGSGKTLAFLLPMLEIIYRREAKTPPGQVGALIISPTRELARQIREVAQPFLEHLP  107 (567)
T ss_pred             CCCHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCC
T ss_conf             36877874667885278568985678871066899999999861157896512479965719999999999999998503


Q ss_pred             CCEEEEEECCCC--CCCCCC-CCCCCEEEECHHHHHCCCCCC---CCCCCCCCCCCCHHHCCCCC
Q ss_conf             606998611210--112234-567662786566731000000---00247200002512201365
Q gi|254780129|r   76 DMTVSSLIGSER--QRIKAL-NTPAHLYIINFENIPWLVKMK---LDHWDFATIVVDESTKLKSF  134 (220)
Q Consensus        76 ~~~~~~~~~~~~--~~~~~~-~~~~~~~i~~~~~l~~~~~~~---~~~~~~~~iIiDEaH~~kn~  134 (220)
T Consensus       108 ~l~~~l~vGG~~v~~Di~~fkee~~nIlVgTPGRL~di~~~~~~~l~~rsLe~LVLDEADrLldm  172 (567)
T KOG0345         108 NLNCELLVGGRSVEEDIKTFKEEGPNILVGTPGRLLDILQREAEKLSFRSLEILVLDEADRLLDM  172 (567)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHCCCEEEECCHHHHHHHHCHHHCCCCCCCCEEEECCHHHHHCC
T ss_conf             65459997686477799999970995899476249999845300036133115775146767443