HHsearch alignment for GI: 254780129 and conserved domain: KOG0347

Probab=98.45  E-value=3.1e-07  Score=60.71  Aligned_cols=158  Identities=15%  Similarity=0.171  Sum_probs=89.6

Q ss_pred             CHHHHHHH--HHHHHC-CCCEEEECCCCCHHHH-HHHHHHHH----------HH--CCCCC--EEEEECCCCCHHHHHHH
Q ss_conf             48999999--999967-9819996899988999-99999999----------74--08994--89972331013788999
Q gi|254780129|r    6 KPHQIVMV--NWLLSH-DRCALWASMGSGKTVS-VLFALSTI----------KI--LDPRP--VLIIAPLRVAQYVWKDE   67 (220)
Q Consensus         6 rp~Q~~a~--~~~~~~-~~~~l~~~~G~GKT~~-ai~~~~~~----------~~--~~~~~--~LIi~P~s~~~~~W~~e   67 (220)
T Consensus       203 ~Pt~IQsl~lp~ai~gk~DIlGaAeTGSGKTLAFGIPiv~~l~~~s~~s~e~~~~~~k~~k~~~LV~tPTRELa~QV~~H  282 (731)
T KOG0347         203 RPTEIQSLVLPAAIRGKVDILGAAETGSGKTLAFGIPIVERLLESSDDSQELSNTSAKYVKPIALVVTPTRELAHQVKQH  282 (731)
T ss_pred             CCCCCHHHCCCHHHCCCHHCCCCCCCCCCCEEEECCHHHHHHHHCCCHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHH
T ss_conf             98610441166765463000033346887424412325454330365376544677605764038963709999999999


Q ss_pred             HHHHCCCCCCEEEEEECCC--CCCCCCCCCCCCEEEECHHHHHCCCCCC----CCCCCCCCCCCCHHHCCCCCCCCCHHH
Q ss_conf             9851553460699861121--0112234567662786566731000000----002472000025122013654332036
Q gi|254780129|r   68 VERWSAFSDMTVSSLIGSE--RQRIKALNTPAHLYIINFENIPWLVKMK----LDHWDFATIVVDESTKLKSFRTHQGTK  141 (220)
Q Consensus        68 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~i~~~~~l~~~~~~~----~~~~~~~~iIiDEaH~~kn~~~~~~~k  141 (220)
T Consensus       283 l~ai~~~t~i~v~si~GGLavqKQqRlL~~~p~IVVATPGRlweli~e~n~~l~~~k~vkcLVlDEaDRmvek-g-hF~E  360 (731)
T KOG0347         283 LKAIAEKTQIRVASITGGLAVQKQQRLLNQRPDIVVATPGRLWELIEEDNTHLGNFKKVKCLVLDEADRMVEK-G-HFEE  360 (731)
T ss_pred             HHHHCCCCCEEEEEEECHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHCEEEEECCHHHHHHH-C-CHHH
T ss_conf             9986134672788752305799999998529987993662899999751066642332407887347777551-1-0999


Q ss_pred             HHHHHHHHH---HCCCCEEEEECCCCC
Q ss_conf             999999985---137987998316532
Q gi|254780129|r  142 QTRALGKVA---FSKVKRFIELTGTPS  165 (220)
Q Consensus       142 ~~k~l~~~~---~~~~~~~l~LTgTPi  165 (220)
T Consensus       361 ls~lL~~L~e~~~~~qrQTlVFSATlt  387 (731)
T KOG0347         361 LSKLLKHLNEEQKNRQRQTLVFSATLT  387 (731)
T ss_pred             HHHHHHHHHHHHCCCCCCEEEEEEEEE
T ss_conf             999999860311051012589987763