HHsearch alignment for GI: 254780129 and conserved domain: KOG0388
>KOG0388 consensus.
Probab=100.00 E-value=8.2e-38 Score=236.33 Aligned_cols=184 Identities=27% Similarity=0.428 Sum_probs=148.2
Q ss_pred CCCCCHHHHHHHHHHHHC----CCCEEEECCCCCHHHHHHHHHHHHHHCC--CCCEEEEECCCCCHHHHHHHHHHHCCCC
Q ss_conf 871348999999999967----9819996899988999999999997408--9948997233101378899998515534
Q gi|254780129|r 2 HLVLKPHQIVMVNWLLSH----DRCALWASMGSGKTVSVLFALSTIKILD--PRPVLIIAPLRVAQYVWKDEVERWSAFS 75 (220)
Q Consensus 2 ~~~Lrp~Q~~a~~~~~~~----~~~~l~~~~G~GKT~~ai~~~~~~~~~~--~~~~LIi~P~s~~~~~W~~e~~~~~~~~ 75 (220)
T Consensus 565 ~ctLKEYQlkGLnWLvnlYdqGiNGILADeMGLGKTVQsisvlAhLaE~~nIwGPFLVVtpaStL-~NWaqEisrFlP-- 641 (1185)
T KOG0388 565 KCTLKEYQLKGLNWLVNLYDQGINGILADEMGLGKTVQSISVLAHLAETHNIWGPFLVVTPASTL-HNWAQEISRFLP-- 641 (1185)
T ss_pred HHHHHHHHHCCHHHHHHHHHCCCCCEEHHHHCCCHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHH-HHHHHHHHHHCC--
T ss_conf 31168876500789999987034412133304532688999999998744588763896027877-679999998586--
Q ss_pred CCEEEEEECCCCCC--CCC---------CCCCCCEEEECHHHHHCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCHHHHHH
Q ss_conf 60699861121011--223---------4567662786566731000000002472000025122013654332036999
Q gi|254780129|r 76 DMTVSSLIGSERQR--IKA---------LNTPAHLYIINFENIPWLVKMKLDHWDFATIVVDESTKLKSFRTHQGTKQTR 144 (220)
Q Consensus 76 ~~~~~~~~~~~~~~--~~~---------~~~~~~~~i~~~~~l~~~~~~~~~~~~~~~iIiDEaH~~kn~~~~~~~k~~k 144 (220)
T Consensus 642 ~~k~lpywGs~~eRkiLrKfw~rKnmY~rna~fhVviTSYQlvVt-Deky~qkvKWQYMILDEAQAIKSS----sS~RWK 716 (1185)
T KOG0388 642 SFKVLPYWGSPSERKILRKFWNRKNMYRRNAPFHVVITSYQLVVT-DEKYLQKVKWQYMILDEAQAIKSS----SSSRWK 716 (1185)
T ss_pred CCEEECCCCCHHHHHHHHHHCCHHHHHCCCCCCEEEEEEEEEEEC-HHHHHHHHHHHHEEHHHHHHHHHH----HHHHHH
T ss_conf 542434768802668999740444443047995289975311111-599998633452005578776432----256788
Q ss_pred HHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCH
Q ss_conf 9999851379879983165324888999999998288853469999999961662
Q gi|254780129|r 145 ALGKVAFSKVKRFIELTGTPSPNGLIDLWGQIWFLDKGKRLGLSFKSFVERWFHT 199 (220)
Q Consensus 145 ~l~~~~~~~~~~~l~LTgTPi~n~~~el~~ll~~l~p~~~~~~~~~~F~~~y~~~ 199 (220)
T Consensus 717 tLL---sF~cRNRLLLTGTPIQNsMqELWALLHFIMP--sLFDshneF-seWFSK 765 (1185)
T KOG0388 717 TLL---SFKCRNRLLLTGTPIQNSMQELWALLHFIMP--SLFDSHNEF-SEWFSK 765 (1185)
T ss_pred HHH---HHHCCCEEEECCCCCCHHHHHHHHHHHHHHH--HHHHCHHHH-HHHHHH
T ss_conf 774---0210340453188530179999999999866--753134778-898865