HHsearch alignment for GI: 254780129 and conserved domain: KOG0388

>KOG0388 consensus.
Probab=100.00  E-value=8.2e-38  Score=236.33  Aligned_cols=184  Identities=27%  Similarity=0.428  Sum_probs=148.2

Q ss_pred             CCCCCHHHHHHHHHHHHC----CCCEEEECCCCCHHHHHHHHHHHHHHCC--CCCEEEEECCCCCHHHHHHHHHHHCCCC
Q ss_conf             871348999999999967----9819996899988999999999997408--9948997233101378899998515534
Q gi|254780129|r    2 HLVLKPHQIVMVNWLLSH----DRCALWASMGSGKTVSVLFALSTIKILD--PRPVLIIAPLRVAQYVWKDEVERWSAFS   75 (220)
Q Consensus         2 ~~~Lrp~Q~~a~~~~~~~----~~~~l~~~~G~GKT~~ai~~~~~~~~~~--~~~~LIi~P~s~~~~~W~~e~~~~~~~~   75 (220)
T Consensus       565 ~ctLKEYQlkGLnWLvnlYdqGiNGILADeMGLGKTVQsisvlAhLaE~~nIwGPFLVVtpaStL-~NWaqEisrFlP--  641 (1185)
T KOG0388         565 KCTLKEYQLKGLNWLVNLYDQGINGILADEMGLGKTVQSISVLAHLAETHNIWGPFLVVTPASTL-HNWAQEISRFLP--  641 (1185)
T ss_pred             HHHHHHHHHCCHHHHHHHHHCCCCCEEHHHHCCCHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHH-HHHHHHHHHHCC--
T ss_conf             31168876500789999987034412133304532688999999998744588763896027877-679999998586--


Q ss_pred             CCEEEEEECCCCCC--CCC---------CCCCCCEEEECHHHHHCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCHHHHHH
Q ss_conf             60699861121011--223---------4567662786566731000000002472000025122013654332036999
Q gi|254780129|r   76 DMTVSSLIGSERQR--IKA---------LNTPAHLYIINFENIPWLVKMKLDHWDFATIVVDESTKLKSFRTHQGTKQTR  144 (220)
Q Consensus        76 ~~~~~~~~~~~~~~--~~~---------~~~~~~~~i~~~~~l~~~~~~~~~~~~~~~iIiDEaH~~kn~~~~~~~k~~k  144 (220)
T Consensus       642 ~~k~lpywGs~~eRkiLrKfw~rKnmY~rna~fhVviTSYQlvVt-Deky~qkvKWQYMILDEAQAIKSS----sS~RWK  716 (1185)
T KOG0388         642 SFKVLPYWGSPSERKILRKFWNRKNMYRRNAPFHVVITSYQLVVT-DEKYLQKVKWQYMILDEAQAIKSS----SSSRWK  716 (1185)
T ss_pred             CCEEECCCCCHHHHHHHHHHCCHHHHHCCCCCCEEEEEEEEEEEC-HHHHHHHHHHHHEEHHHHHHHHHH----HHHHHH
T ss_conf             542434768802668999740444443047995289975311111-599998633452005578776432----256788


Q ss_pred             HHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCH
Q ss_conf             9999851379879983165324888999999998288853469999999961662
Q gi|254780129|r  145 ALGKVAFSKVKRFIELTGTPSPNGLIDLWGQIWFLDKGKRLGLSFKSFVERWFHT  199 (220)
Q Consensus       145 ~l~~~~~~~~~~~l~LTgTPi~n~~~el~~ll~~l~p~~~~~~~~~~F~~~y~~~  199 (220)
T Consensus       717 tLL---sF~cRNRLLLTGTPIQNsMqELWALLHFIMP--sLFDshneF-seWFSK  765 (1185)
T KOG0388         717 TLL---SFKCRNRLLLTGTPIQNSMQELWALLHFIMP--SLFDSHNEF-SEWFSK  765 (1185)
T ss_pred             HHH---HHHCCCEEEECCCCCCHHHHHHHHHHHHHHH--HHHHCHHHH-HHHHHH
T ss_conf             774---0210340453188530179999999999866--753134778-898865