HHsearch alignment for GI: 254780129 and conserved domain: KOG0389

Probab=100.00  E-value=2.6e-40  Score=250.68  Aligned_cols=170  Identities=27%  Similarity=0.399  Sum_probs=142.6

Q ss_pred             CCCCHHHHHHHHHHHH----CCCCEEEECCCCCHHHHHHHHHHHHHHCC-CCCEEEEECCCCCHHHHHHHHHHHCCCCCC
Q ss_conf             7134899999999996----79819996899988999999999997408-994899723310137889999851553460
Q gi|254780129|r    3 LVLKPHQIVMVNWLLS----HDRCALWASMGSGKTVSVLFALSTIKILD-PRPVLIIAPLRVAQYVWKDEVERWSAFSDM   77 (220)
Q Consensus         3 ~~Lrp~Q~~a~~~~~~----~~~~~l~~~~G~GKT~~ai~~~~~~~~~~-~~~~LIi~P~s~~~~~W~~e~~~~~~~~~~   77 (220)
T Consensus       398 i~LkdYQlvGvNWL~Llyk~~l~gILADEMGLGKTiQvIaFlayLkq~g~~gpHLVVvPsSTleN-WlrEf~kwCP--sl  474 (941)
T KOG0389         398 IQLKDYQLVGVNWLLLLYKKKLNGILADEMGLGKTIQVIAFLAYLKQIGNPGPHLVVVPSSTLEN-WLREFAKWCP--SL  474 (941)
T ss_pred             CCCCCHHHHHHHHHHHHHHCCCCCEEHHHCCCCCHHHHHHHHHHHHHCCCCCCCEEEECCHHHHH-HHHHHHHHCC--CE
T ss_conf             73342220228999999974233053222057633489999999997299998379920316888-9999997597--52


Q ss_pred             EEEEEECCCCCCC------CCCCCCCCEEEECHHHHHC--CCCCCCCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHH
Q ss_conf             6998611210112------2345676627865667310--0000000247200002512201365433203699999998
Q gi|254780129|r   78 TVSSLIGSERQRI------KALNTPAHLYIINFENIPW--LVKMKLDHWDFATIVVDESTKLKSFRTHQGTKQTRALGKV  149 (220)
Q Consensus        78 ~~~~~~~~~~~~~------~~~~~~~~~~i~~~~~l~~--~~~~~~~~~~~~~iIiDEaH~~kn~~~~~~~k~~k~l~~~  149 (220)
T Consensus       475 ~Ve~YyGSq~ER~~lR~~i~~~~~~ydVllTTY~la~~~kdDRsflk~~~~n~viyDEgHmLKN~----~SeRy~~LM~I  550 (941)
T KOG0389         475 KVEPYYGSQDERRELRERIKKNKDDYDVLLTTYNLAASSKDDRSFLKNQKFNYVIYDEGHMLKNR----TSERYKHLMSI  550 (941)
T ss_pred             EEEECCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHCCCCEEEECCHHHHHCC----CHHHHHHHCCC
T ss_conf             87741576899999999986168885289987211038867789998666667996132654213----34988875064


Q ss_pred             HHCCCCEEEEECCCCCCCCHHHHHHHHHHHCCC
Q ss_conf             513798799831653248889999999982888
Q gi|254780129|r  150 AFSKVKRFIELTGTPSPNGLIDLWGQIWFLDKG  182 (220)
Q Consensus       150 ~~~~~~~~l~LTgTPi~n~~~el~~ll~~l~p~  182 (220)
T Consensus       551 ---~An~RlLLTGTPLQNNL~ELiSLL~FvlP~  580 (941)
T KOG0389         551 ---NANFRLLLTGTPLQNNLKELISLLAFVLPK  580 (941)
T ss_pred             ---CCCCEEEEECCCCCCCHHHHHHHHHHHHHH
T ss_conf             ---655358851874201299999999997457