HHsearch alignment for GI: 254780129 and conserved domain: KOG1001
>KOG1001 consensus.
Probab=99.93 E-value=3.9e-25 Score=163.50 Aligned_cols=170 Identities=23% Similarity=0.272 Sum_probs=126.9
Q ss_pred CCCEEEECCCCCHHHHHHHHHHHHHHC--------CCCCEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCC
Q ss_conf 981999689998899999999999740--------899489972331013788999985155346069986112101122
Q gi|254780129|r 20 DRCALWASMGSGKTVSVLFALSTIKIL--------DPRPVLIIAPLRVAQYVWKDEVERWSAFSDMTVSSLIGSERQRIK 91 (220)
Q Consensus 20 ~~~~l~~~~G~GKT~~ai~~~~~~~~~--------~~~~~LIi~P~s~~~~~W~~e~~~~~~~~~~~~~~~~~~~~~~~~ 91 (220)
T Consensus 153 ~ggIladd~glgkt~~ti~l~l~~~~~~~~~~~~~~~kttLivcp~s~~~-qW~~elek~~~~~~l~v~v~~g--r~kd~ 229 (674)
T KOG1001 153 RGGILADDMGLGKTVKTIALILKQKLKSKEEDRQKEFKTTLIVCPTSLLT-QWKTELEKVTEEDKLSIYVYHG--RTKDK 229 (674)
T ss_pred CCCEEEECCCCCHHHHHHHHHHHCCCCCCCHHHCCCCCCEEEECCHHHHH-HHHHHHHCCCCCCCEEEEEECC--CCCCC
T ss_conf 45067651014158999999996436771023302467436966658888-8888873358866469999616--42433
Q ss_pred CCCCCCCEEEECHHHHHCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHH
Q ss_conf 34567662786566731000000002472000025122013654332036999999985137987998316532488899
Q gi|254780129|r 92 ALNTPAHLYIINFENIPWLVKMKLDHWDFATIVVDESTKLKSFRTHQGTKQTRALGKVAFSKVKRFIELTGTPSPNGLID 171 (220)
Q Consensus 92 ~~~~~~~~~i~~~~~l~~~~~~~~~~~~~~~iIiDEaH~~kn~~~~~~~k~~k~l~~~~~~~~~~~l~LTgTPi~n~~~e 171 (220)
T Consensus 230 ~el~~~dvVltTy~il~~---~~l~~i~w~Riildea~~ikn~~----tq~~~a---~~~L~a~~RWcLtgtPiqn~~~~ 299 (674)
T KOG1001 230 SELNSYDVVLTTYDILKN---SPLVKIKWLRIVLDEAHTIKNKD----TQIFKA---VCQLDAKYRWCLTGTPIQNNLDE 299 (674)
T ss_pred CHHCCCCEEEEEHHHHHC---CCCCCEEEEEEEECCCCCCCCCC----HHHHHH---HEEECCCEEEEECCCHHHHHHHH
T ss_conf 134177669933788515---35001257888701200267852----676655---13531422254047825664999
Q ss_pred HHHHHHHHCCCCCCCCCHHHHHHHHCCHHHCCC
Q ss_conf 999999828885346999999996166242046
Q gi|254780129|r 172 LWGQIWFLDKGKRLGLSFKSFVERWFHTQQVGS 204 (220)
Q Consensus 172 l~~ll~~l~p~~~~~~~~~~F~~~y~~~~~~~~ 204 (220)
T Consensus 300 lysl~~fl~~~p~--~~~~~~~~~i~~p~~~~~ 330 (674)
T KOG1001 300 LYSLFKFLEIHPY--CDQNYFKLLIQDPDERNK 330 (674)
T ss_pred HHHHHHHHHCCCC--HHHHHHHHHHCCHHHHHH
T ss_conf 9999987603873--036789887137153124