HHsearch alignment for GI: 254780129 and conserved domain: KOG1016
>KOG1016 consensus.
Probab=99.95 E-value=1.3e-28 Score=183.41 Aligned_cols=196 Identities=27% Similarity=0.431 Sum_probs=144.4
Q ss_pred CCCCHHHHHHHHHHHHC-------------CCCEEEECCCCCHHHHHHHHHHH-HHHCCCCCEEEEECCCCCHHHHHHHH
Q ss_conf 71348999999999967-------------98199968999889999999999-97408994899723310137889999
Q gi|254780129|r 3 LVLKPHQIVMVNWLLSH-------------DRCALWASMGSGKTVSVLFALST-IKILDPRPVLIIAPLRVAQYVWKDEV 68 (220)
Q Consensus 3 ~~Lrp~Q~~a~~~~~~~-------------~~~~l~~~~G~GKT~~ai~~~~~-~~~~~~~~~LIi~P~s~~~~~W~~e~ 68 (220)
T Consensus 253 ~v~kPHQiGGiRFlYDN~iESl~rykkSsGFGCILAHSMGLGKTlQVisF~diflRhT~AKtVL~ivPiNTlQN-WlsEf 331 (1387)
T KOG1016 253 HVLKPHQIGGIRFLYDNTIESLGRYKKSSGFGCILAHSMGLGKTLQVISFSDIFLRHTKAKTVLVIVPINTLQN-WLSEF 331 (1387)
T ss_pred HHCCCCCCCCEEEEHHHHHHHHHHCCCCCCCCEEEEECCCCCCEEEEEEHHHHHHHCCCCCEEEEEEEHHHHHH-HHHHH
T ss_conf 32581001757875031788876301467763200000256742588666677864276644899986078888-99985
Q ss_pred HHHCCCC---------CCEEEEEECCCC---CC---CCCCCCCCCEEEECHHHHHCCCCC--------------------
Q ss_conf 8515534---------606998611210---11---223456766278656673100000--------------------
Q gi|254780129|r 69 ERWSAFS---------DMTVSSLIGSER---QR---IKALNTPAHLYIINFENIPWLVKM-------------------- 113 (220)
Q Consensus 69 ~~~~~~~---------~~~~~~~~~~~~---~~---~~~~~~~~~~~i~~~~~l~~~~~~-------------------- 113 (220)
T Consensus 332 nmWiP~y~sD~~vrpR~F~vf~LnD~~KT~~~Rakvi~~Wv~~GGVlLvGYemfRLL~lk~~~~~grpkkt~kr~~~~~i 411 (1387)
T KOG1016 332 NMWIPKYFSDTGVRPRSFEVFLLNDGVKTFDQRAKVIEQWVQTGGVLLVGYEMFRLLILKTLPKKGRPKKTLKRISSGFI 411 (1387)
T ss_pred HHHCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
T ss_conf 32067776667876530478982473045899999999876039789861899999987302335874200014677403
Q ss_pred -----------------CCCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHH
Q ss_conf -----------------000247200002512201365433203699999998513798799831653248889999999
Q gi|254780129|r 114 -----------------KLDHWDFATIVVDESTKLKSFRTHQGTKQTRALGKVAFSKVKRFIELTGTPSPNGLIDLWGQI 176 (220)
Q Consensus 114 -----------------~~~~~~~~~iIiDEaH~~kn~~~~~~~k~~k~l~~~~~~~~~~~l~LTgTPi~n~~~el~~ll 176 (220)
T Consensus 412 ~~d~eD~~qe~~~li~~AL~~PGPDlVICDEGHrIKN~----~A~iS~aLk~I---rtrRRiVLTGYPLQNNLlEYwCMV 484 (1387)
T KOG1016 412 KDDSEDQRQEAYSLIRSALLEPGPDLVICDEGHRIKNI----TAEISMALKAI---RTRRRIVLTGYPLQNNLLEYWCMV 484 (1387)
T ss_pred CCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCEECCC----HHHHHHHHHHH---HHCEEEEEECCCCCCCHHHHHHHH
T ss_conf 77401468999999999843789976882588521332----27889999875---431068874665531168775642
Q ss_pred HHHCCCCCCCCCHHHHHHHHCCHHHCCCCHHH
Q ss_conf 98288853469999999961662420463566
Q gi|254780129|r 177 WFLDKGKRLGLSFKSFVERWFHTQQVGSSIGA 208 (220)
Q Consensus 177 ~~l~p~~~~~~~~~~F~~~y~~~~~~~~~~~~ 208 (220)
T Consensus 485 DFVRP~-yLG-TR~eF~nmFErPI~NGQCvDS 514 (1387)
T KOG1016 485 DFVRPK-YLG-TRKEFINMFERPIKNGQCVDS 514 (1387)
T ss_pred EECCCC-CCC-HHHHHHHHHHCCCCCCCCCCC
T ss_conf 001533-233-089998886456547845568