HHsearch alignment for GI: 254780129 and conserved domain: PRK04132
>PRK04132 replication factor C small subunit; Provisional.
Probab=90.33 E-value=0.36 Score=25.87 Aligned_cols=36 Identities=25% Similarity=0.155 Sum_probs=25.5
Q ss_pred HHHHHHHHH------HCCCCEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 999999999------679819996899988999999999997
Q gi|254780129|r 9 QIVMVNWLL------SHDRCALWASMGSGKTVSVLFALSTIK 44 (220)
Q Consensus 9 Q~~a~~~~~------~~~~~~l~~~~G~GKT~~ai~~~~~~~ 44 (220)
T Consensus 30 QehIVkRLK~YVk~~smPHLLFaGPPGvGKt~~al~lar~l~ 71 (863)
T PRK04132 30 QDHIVKRLKHYVKTGSMPHLLFAGPPGVGKTTAALALARELF 71 (863)
T ss_pred HHHHHHHHHHHHCCCCCCCEEECCCCCCCCHHHHHHHHHHHH
T ss_conf 499999999886238885443048998771447888888761