HHsearch alignment for GI: 254780129 and conserved domain: PRK04296

>PRK04296 thymidine kinase; Provisional.
Probab=96.97  E-value=0.016  Score=33.57  Aligned_cols=129  Identities=17%  Similarity=0.117  Sum_probs=62.9

Q ss_pred             EEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCEEEE
Q ss_conf             99968999889999999999974089948997233101378899998515534606998611210112234567662786
Q gi|254780129|r   23 ALWASMGSGKTVSVLFALSTIKILDPRPVLIIAPLRVAQYVWKDEVERWSAFSDMTVSSLIGSERQRIKALNTPAHLYII  102 (220)
Q Consensus        23 ~l~~~~G~GKT~~ai~~~~~~~~~~~~~~LIi~P~s~~~~~W~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  102 (220)
T Consensus         6 ~i~GpMfSGKTteLi~~~~~~~~-~gkkvl~~kp~~D~R---------y~---~~~I~Sh~g~~~--------~-~~~v~   63 (197)
T PRK04296          6 FIYGAMNSGKSTELLQRAYNYEE-RGMKVLVFTPAIDDR---------YG---EGKVVSRIGLSR--------E-AILIS   63 (197)
T ss_pred             EEECCCCCHHHHHHHHHHHHHHH-CCCEEEEEEECCCCC---------CC---CCCEECCCCCEE--------E-EEEEC
T ss_conf             99934278889999999999998-799599998534465---------77---785786789834--------6-89948


Q ss_pred             CHHHHHCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHCCCC--EEEEECCCCCCCCHHHHHHHHHHHC
Q ss_conf             56673100000000247200002512201365433203699999998513798--7998316532488899999999828
Q gi|254780129|r  103 NFENIPWLVKMKLDHWDFATIVVDESTKLKSFRTHQGTKQTRALGKVAFSKVK--RFIELTGTPSPNGLIDLWGQIWFLD  180 (220)
Q Consensus       103 ~~~~l~~~~~~~~~~~~~~~iIiDEaH~~kn~~~~~~~k~~k~l~~~~~~~~~--~~l~LTgTPi~n~~~el~~ll~~l~  180 (220)
T Consensus        64 ~~~~i~~~~~~~~~~~~~dvI~IDEaQFf~~------~~i~~~~~~~-~~~~~~Viv~GLd~Df~~~~F~~~~~Li~~Ad  136 (197)
T PRK04296         64 SDTDIFELIEEEHEGGKIDCVLIDEAQFLDK------EQVVQLAEVV-DDLGIPVICYGLDTDFRGEPFEGSPYLLALAD  136 (197)
T ss_pred             CHHHHHHHHHHHHCCCCCCEEEECCHHCCCH------HHHHHHHHHH-HHCCCEEEEEEECCCCCCCCCHHHHHHHHHCC
T ss_conf             7899999998763047856899720212798------9999999999-83185899976503302486543999997268