HHsearch alignment for GI: 254780129 and conserved domain: PRK05648
>PRK05648 DNA polymerase III subunits gamma and tau; Reviewed.
Probab=97.21 E-value=0.0052 Score=36.46 Aligned_cols=141 Identities=15% Similarity=0.134 Sum_probs=65.9
Q ss_pred HHHHHHHHHHHCC---CCEEEECC-CCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEEE
Q ss_conf 9999999999679---81999689-9988999999999997408994899723310137889999851553460699861
Q gi|254780129|r 8 HQIVMVNWLLSHD---RCALWASM-GSGKTVSVLFALSTIKILDPRPVLIIAPLRVAQYVWKDEVERWSAFSDMTVSSLI 83 (220)
Q Consensus 8 ~Q~~a~~~~~~~~---~~~l~~~~-G~GKT~~ai~~~~~~~~~~~~~~LIi~P~s~~~~~W~~e~~~~~~~~~~~~~~~~ 83 (220)
T Consensus 23 ~~~~~l~~~~~~~~~~~a~l~~g~rg~gkt~~ar~~ak~lnc~-~~~~--~~pc~~c~~--c~~i~~---~~~~d~~e~d 94 (705)
T PRK05648 23 HVLKALINALDNQRLHHAYLFTGTRGVGKTTIARIIAKCLNCE-TGVS--STPCGECSV--CREIDE---GRFVDLIEVD 94 (705)
T ss_pred HHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCC-CCCC--CCCCCCCHH--HHHHHC---CCCCCEEEEC
T ss_conf 9999999999709863046500789888989999999986778-9998--897877600--466624---8977634451
Q ss_pred CCCCCCCCCCCCCCCEEEECHHHHHCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCC
Q ss_conf 12101122345676627865667310000000024720000251220136543320369999999851379879983165
Q gi|254780129|r 84 GSERQRIKALNTPAHLYIINFENIPWLVKMKLDHWDFATIVVDESTKLKSFRTHQGTKQTRALGKVAFSKVKRFIELTGT 163 (220)
Q Consensus 84 ~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~~~~~~~~~~iIiDEaH~~kn~~~~~~~k~~k~l~~~~~~~~~~~l~LTgT 163 (220)
T Consensus 95 ~as~~~v~~----------~r~~~~-~~~~~p~~~~~kv~~idevhmls-------~~~fnallktleepp~~v~f~~at 156 (705)
T PRK05648 95 AASRTKVED----------TRELLD-NVQYAPTRGRYKVYLIDEVHMLS-------SHSFNALLKTLEEPPPHVKFLLAT 156 (705)
T ss_pred CCCCCCHHH----------HHHHHH-HCCCCCCCCCEEEEEEEHHHHCC-------HHHHHHHHHHCCCCCCCEEEEEEC
T ss_conf 554478899----------999998-55517767745799984265417-------999999987404797545999842
Q ss_pred CCCCC-HHHHHH
Q ss_conf 32488-899999
Q gi|254780129|r 164 PSPNG-LIDLWG 174 (220)
Q Consensus 164 Pi~n~-~~el~~ 174 (220)
T Consensus 157 t~~~k~p~t~~s 168 (705)
T PRK05648 157 TDPQKLPVTILS 168 (705)
T ss_pred CCHHHCCHHHHH
T ss_conf 873537589997