HHsearch alignment for GI: 254780129 and conserved domain: PRK06526

>PRK06526 transposase; Provisional.
Probab=92.67  E-value=0.24  Score=26.83  Aligned_cols=42  Identities=14%  Similarity=0.145  Sum_probs=31.1

Q ss_pred             HHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEE
Q ss_conf             9999967981999689998899999999999740899489972
Q gi|254780129|r   13 VNWLLSHDRCALWASMGSGKTVSVLFALSTIKILDPRPVLIIA   55 (220)
Q Consensus        13 ~~~~~~~~~~~l~~~~G~GKT~~ai~~~~~~~~~~~~~~LIi~   55 (220)
T Consensus        92 ~~fi~~~~Nvil~G~~GtGKThLA~Alg~~A~~~-G~~v~f~~  133 (254)
T PRK06526         92 LDFVTGKENVVFLGPPGTGKTHLAIGLGIRACQA-GHRVLFAT  133 (254)
T ss_pred             CCHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHC-CCCEEEEE
T ss_conf             7177658878998999986899999999999986-99679987