HHsearch alignment for GI: 254780129 and conserved domain: PRK06526
>PRK06526 transposase; Provisional.
Probab=92.67 E-value=0.24 Score=26.83 Aligned_cols=42 Identities=14% Similarity=0.145 Sum_probs=31.1
Q ss_pred HHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEE
Q ss_conf 9999967981999689998899999999999740899489972
Q gi|254780129|r 13 VNWLLSHDRCALWASMGSGKTVSVLFALSTIKILDPRPVLIIA 55 (220)
Q Consensus 13 ~~~~~~~~~~~l~~~~G~GKT~~ai~~~~~~~~~~~~~~LIi~ 55 (220)
T Consensus 92 ~~fi~~~~Nvil~G~~GtGKThLA~Alg~~A~~~-G~~v~f~~ 133 (254)
T PRK06526 92 LDFVTGKENVVFLGPPGTGKTHLAIGLGIRACQA-GHRVLFAT 133 (254)
T ss_pred CCHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHC-CCCEEEEE
T ss_conf 7177658878998999986899999999999986-99679987