HHsearch alignment for GI: 254780129 and conserved domain: PRK06872
>PRK06872 DNA polymerase III subunits gamma and tau; Provisional.
Probab=97.30 E-value=0.0053 Score=36.40 Aligned_cols=142 Identities=17% Similarity=0.149 Sum_probs=65.8
Q ss_pred HHHHHHHHHHHHCC---CCEEEECC-CCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEE
Q ss_conf 89999999999679---81999689-998899999999999740899489972331013788999985155346069986
Q gi|254780129|r 7 PHQIVMVNWLLSHD---RCALWASM-GSGKTVSVLFALSTIKILDPRPVLIIAPLRVAQYVWKDEVERWSAFSDMTVSSL 82 (220)
Q Consensus 7 p~Q~~a~~~~~~~~---~~~l~~~~-G~GKT~~ai~~~~~~~~~~~~~~LIi~P~s~~~~~W~~e~~~~~~~~~~~~~~~ 82 (220)
T Consensus 22 ~~v~~~l~~a~~~~r~~haylf~g~rg~gktt~ari~ak~lnc~~-~~~--~~pcg~c~~--c~~i~~---g~~~d~~ei 93 (696)
T PRK06872 22 EHILTALSNGLKENRLHHAYLFSGTRGVGKTSIARLFAKGLNCVH-GVT--ATPCGECEN--CKAIEE---GNFIDLIEI 93 (696)
T ss_pred HHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCC-CCC--CCCCCCCHH--HHHHHC---CCCCCEEEE
T ss_conf 999999999997198630475117898888899999999867899-999--997888622--576744---787754675
Q ss_pred ECCCCCCCCCCCCCCCEEEECHHHHHCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECC
Q ss_conf 11210112234567662786566731000000002472000025122013654332036999999985137987998316
Q gi|254780129|r 83 IGSERQRIKALNTPAHLYIINFENIPWLVKMKLDHWDFATIVVDESTKLKSFRTHQGTKQTRALGKVAFSKVKRFIELTG 162 (220)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~~~~~~~~~~iIiDEaH~~kn~~~~~~~k~~k~l~~~~~~~~~~~l~LTg 162 (220)
T Consensus 94 daas~~~v~~----------~r~l~~~-~~~~p~~~~~kvy~idevhmls-------~~~fnallktleepp~~v~f~la 155 (696)
T PRK06872 94 DAASRTKVED----------TRELLDN-VQYKPVVGRFKVYLIDEVHMLS-------RHSFNALLKTLEEPPEYVKFLLA 155 (696)
T ss_pred ECCCCCCHHH----------HHHHHHH-CCCCCCCCCEEEEEEEHHHHCC-------HHHHHHHHHHHCCCCCCEEEEEE
T ss_conf 0565578899----------9999984-5457767754799970054438-------99999998750279754489984
Q ss_pred CCCCCC-HHHHHH
Q ss_conf 532488-899999
Q gi|254780129|r 163 TPSPNG-LIDLWG 174 (220)
Q Consensus 163 TPi~n~-~~el~~ 174 (220)
T Consensus 156 tt~~~k~p~tils 168 (696)
T PRK06872 156 TTDPQKLPITILS 168 (696)
T ss_pred CCCHHHCCHHHHH
T ss_conf 3863227488987