HHsearch alignment for GI: 254780129 and conserved domain: PRK08769

>PRK08769 DNA polymerase III subunit delta'; Validated.
Probab=97.77  E-value=0.0002  Score=44.54  Aligned_cols=154  Identities=16%  Similarity=0.141  Sum_probs=73.6

Q ss_pred             CCCCCCHHHHHHHHHHH---HC---CCCEEEEC-CCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHCC
Q ss_conf             98713489999999999---67---98199968-9998899999999999740899489972331013788999985155
Q gi|254780129|r    1 MHLVLKPHQIVMVNWLL---SH---DRCALWAS-MGSGKTVSVLFALSTIKILDPRPVLIIAPLRVAQYVWKDEVERWSA   73 (220)
Q Consensus         1 ~~~~Lrp~Q~~a~~~~~---~~---~~~~l~~~-~G~GKT~~ai~~~~~~~~~~~~~~LIi~P~s~~~~~W~~e~~~~~~   73 (220)
T Consensus         1 ~~~~~~PWq~~~~~~L~~~i~~~rl~HA~Lf~Gp~G~GK~~~A~~~A~~llc~~~~~~--~~~~--~~~-~---i~~-g~   71 (319)
T PRK08769          1 MTSAFSPWQQRAFDQTVAALDAGRLGHGLLICGPEGLGKRAVALALAEHVLASGPDPA--LAQR--TRQ-L---IAA-GT   71 (319)
T ss_pred             CCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCC--CCCH--HHH-H---HHC-CC
T ss_conf             9855587768999999999976994206875899987899999999999837997976--5433--889-9---966-89


Q ss_pred             CCCCEEEEEECCCCCCCCCCCCCCCEEEECHHHHHCCCCCC---CCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHH
Q ss_conf             34606998611210112234567662786566731000000---002472000025122013654332036999999985
Q gi|254780129|r   74 FSDMTVSSLIGSERQRIKALNTPAHLYIINFENIPWLVKMK---LDHWDFATIVVDESTKLKSFRTHQGTKQTRALGKVA  150 (220)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~~---~~~~~~~~iIiDEaH~~kn~~~~~~~k~~k~l~~~~  150 (220)
T Consensus        72 HPD~~~i~~~~~~~~--~k~--k~---~I~IdqiR~l~~~~~~~p~~g~~KV~IId~Ad~m-n~------~AaNalLK~L  137 (319)
T PRK08769         72 HPDLQLVSFIPNRTG--DKL--RT---EIVIEQVREISQKLALTPQYGIAQVVIVDPADAI-NR------SACNALLKTL  137 (319)
T ss_pred             CCCEEEEECCCCCCC--CCC--CC---CCCHHHHHHHHHHHHHCCCCCCCEEEEECCHHHC-CH------HHHHHHHHHH
T ss_conf             989687753444454--311--23---4869999999999613720279569998066752-89------9999999982


Q ss_pred             H-CCCCEEEEECCCCCCCCHHHHHHHHH
Q ss_conf             1-37987998316532488899999999
Q gi|254780129|r  151 F-SKVKRFIELTGTPSPNGLIDLWGQIW  177 (220)
Q Consensus       151 ~-~~~~~~l~LTgTPi~n~~~el~~ll~  177 (220)
T Consensus       138 EEPp~~~~~iL~~~~~~~ll~TI~SRCq  165 (319)
T PRK08769        138 EEPSPGRYLWLISAQPARLPATIRSRCQ  165 (319)
T ss_pred             CCCCCCEEEEEEECCHHHCCHHHHHCCE
T ss_conf             2799884899986993658247764850