HHsearch alignment for GI: 254780129 and conserved domain: PRK08769
>PRK08769 DNA polymerase III subunit delta'; Validated.
Probab=97.77 E-value=0.0002 Score=44.54 Aligned_cols=154 Identities=16% Similarity=0.141 Sum_probs=73.6
Q ss_pred CCCCCCHHHHHHHHHHH---HC---CCCEEEEC-CCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHCC
Q ss_conf 98713489999999999---67---98199968-9998899999999999740899489972331013788999985155
Q gi|254780129|r 1 MHLVLKPHQIVMVNWLL---SH---DRCALWAS-MGSGKTVSVLFALSTIKILDPRPVLIIAPLRVAQYVWKDEVERWSA 73 (220)
Q Consensus 1 ~~~~Lrp~Q~~a~~~~~---~~---~~~~l~~~-~G~GKT~~ai~~~~~~~~~~~~~~LIi~P~s~~~~~W~~e~~~~~~ 73 (220)
T Consensus 1 ~~~~~~PWq~~~~~~L~~~i~~~rl~HA~Lf~Gp~G~GK~~~A~~~A~~llc~~~~~~--~~~~--~~~-~---i~~-g~ 71 (319)
T PRK08769 1 MTSAFSPWQQRAFDQTVAALDAGRLGHGLLICGPEGLGKRAVALALAEHVLASGPDPA--LAQR--TRQ-L---IAA-GT 71 (319)
T ss_pred CCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCC--CCCH--HHH-H---HHC-CC
T ss_conf 9855587768999999999976994206875899987899999999999837997976--5433--889-9---966-89
Q ss_pred CCCCEEEEEECCCCCCCCCCCCCCCEEEECHHHHHCCCCCC---CCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 34606998611210112234567662786566731000000---002472000025122013654332036999999985
Q gi|254780129|r 74 FSDMTVSSLIGSERQRIKALNTPAHLYIINFENIPWLVKMK---LDHWDFATIVVDESTKLKSFRTHQGTKQTRALGKVA 150 (220)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~~---~~~~~~~~iIiDEaH~~kn~~~~~~~k~~k~l~~~~ 150 (220)
T Consensus 72 HPD~~~i~~~~~~~~--~k~--k~---~I~IdqiR~l~~~~~~~p~~g~~KV~IId~Ad~m-n~------~AaNalLK~L 137 (319)
T PRK08769 72 HPDLQLVSFIPNRTG--DKL--RT---EIVIEQVREISQKLALTPQYGIAQVVIVDPADAI-NR------SACNALLKTL 137 (319)
T ss_pred CCCEEEEECCCCCCC--CCC--CC---CCCHHHHHHHHHHHHHCCCCCCCEEEEECCHHHC-CH------HHHHHHHHHH
T ss_conf 989687753444454--311--23---4869999999999613720279569998066752-89------9999999982
Q ss_pred H-CCCCEEEEECCCCCCCCHHHHHHHHH
Q ss_conf 1-37987998316532488899999999
Q gi|254780129|r 151 F-SKVKRFIELTGTPSPNGLIDLWGQIW 177 (220)
Q Consensus 151 ~-~~~~~~l~LTgTPi~n~~~el~~ll~ 177 (220)
T Consensus 138 EEPp~~~~~iL~~~~~~~ll~TI~SRCq 165 (319)
T PRK08769 138 EEPSPGRYLWLISAQPARLPATIRSRCQ 165 (319)
T ss_pred CCCCCCEEEEEEECCHHHCCHHHHHCCE
T ss_conf 2799884899986993658247764850