HHsearch alignment for GI: 254780129 and conserved domain: PRK08853
>PRK08853 DNA polymerase III subunits gamma and tau; Validated.
Probab=97.59 E-value=0.00093 Score=40.72 Aligned_cols=143 Identities=17% Similarity=0.159 Sum_probs=68.4
Q ss_pred HHHHHHHHHHHHCC---CCEEEECC-CCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEE
Q ss_conf 89999999999679---81999689-998899999999999740899489972331013788999985155346069986
Q gi|254780129|r 7 PHQIVMVNWLLSHD---RCALWASM-GSGKTVSVLFALSTIKILDPRPVLIIAPLRVAQYVWKDEVERWSAFSDMTVSSL 82 (220)
Q Consensus 7 p~Q~~a~~~~~~~~---~~~l~~~~-G~GKT~~ai~~~~~~~~~~~~~~LIi~P~s~~~~~W~~e~~~~~~~~~~~~~~~ 82 (220)
T Consensus 22 ~~v~~~L~nal~~~rl~haylf~G~rGvGKTt~ARi~Ak~lNC~~-~~~~--~pcg~C~~--C~~i~~---g~~~d~~Ei 93 (717)
T PRK08853 22 SHVLTALENALAHNRLHHAYLFSGTRGVGKTTIGRLFAKGLNCET-GITS--TPCGQCAT--CKEIDE---GRFVDLLEI 93 (717)
T ss_pred HHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCC-CCCC--CCCCCCCC--HHHHHC---CCCCCEEEE
T ss_conf 999999999997099740576108898889899999999867899-9999--97888702--676744---787752454
Q ss_pred ECCCCCCCCCCCCCCCEEEECHHHHHCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECC
Q ss_conf 11210112234567662786566731000000002472000025122013654332036999999985137987998316
Q gi|254780129|r 83 IGSERQRIKALNTPAHLYIINFENIPWLVKMKLDHWDFATIVVDESTKLKSFRTHQGTKQTRALGKVAFSKVKRFIELTG 162 (220)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~~~~~~~~~~iIiDEaH~~kn~~~~~~~k~~k~l~~~~~~~~~~~l~LTg 162 (220)
T Consensus 94 DaAs~~~vdd~----------rel~~-~~~y~p~~~~yKvyiiDEvHmls-------~~afnAlLKtlEEPP~hv~Fila 155 (717)
T PRK08853 94 DAASRTKVEDT----------RELLD-NVQYKPARGRFKVYLIDEVHMLS-------RHSFNALLKTLEEPPEYVKFLLA 155 (717)
T ss_pred CCCCCCCHHHH----------HHHHH-HCCCCCCCCCEEEEEEECHHHCC-------HHHHHHHHHHHCCCCCCEEEEEE
T ss_conf 05656788999----------99998-55548877854799983054438-------99999998760378756489984
Q ss_pred CCCCCC-HHHHHHH
Q ss_conf 532488-8999999
Q gi|254780129|r 163 TPSPNG-LIDLWGQ 175 (220)
Q Consensus 163 TPi~n~-~~el~~l 175 (220)
T Consensus 156 TT~~~kip~TilSR 169 (717)
T PRK08853 156 TTDPQKLPVTILSR 169 (717)
T ss_pred CCCHHHCCHHHHHH
T ss_conf 38734373889876