HHsearch alignment for GI: 254780129 and conserved domain: PRK09111

>PRK09111 DNA polymerase III subunits gamma and tau; Validated.
Probab=97.19  E-value=0.0059  Score=36.14  Aligned_cols=129  Identities=13%  Similarity=0.120  Sum_probs=63.3

Q ss_pred             CCEEEECC-CCCHHHHHHHHHHHHHHCC----CCCEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCC
Q ss_conf             81999689-9988999999999997408----994899723310137889999851553460699861121011223456
Q gi|254780129|r   21 RCALWASM-GSGKTVSVLFALSTIKILD----PRPVLIIAPLRVAQYVWKDEVERWSAFSDMTVSSLIGSERQRIKALNT   95 (220)
Q Consensus        21 ~~~l~~~~-G~GKT~~ai~~~~~~~~~~----~~~~LIi~P~s~~~~~W~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~   95 (220)
T Consensus        46 ~a~l~~g~rg~gktt~ari~a~~lnc~~~~~~~~~~~~~c--~~c~~--c~~i~~---~~~~d~~e~daas~~~v-----  113 (600)
T PRK09111         46 QAFMLTGVRGVGKTTTARILARALNYKGPDGVGGPTIDPC--GVGEH--CQAIME---GRHVDVIEMDAASHTGV-----  113 (600)
T ss_pred             CEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCC--CCCHH--HHHHHC---CCCCCEEEEECCCCCCH-----
T ss_conf             0476457898789999999999966988766689988989--98865--898866---89987588515545788-----


Q ss_pred             CCCEEEECHHHHHCC---CCCCCCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCC-HHH
Q ss_conf             766278656673100---0000002472000025122013654332036999999985137987998316532488-899
Q gi|254780129|r   96 PAHLYIINFENIPWL---VKMKLDHWDFATIVVDESTKLKSFRTHQGTKQTRALGKVAFSKVKRFIELTGTPSPNG-LID  171 (220)
Q Consensus        96 ~~~~~i~~~~~l~~~---~~~~~~~~~~~~iIiDEaH~~kn~~~~~~~k~~k~l~~~~~~~~~~~l~LTgTPi~n~-~~e  171 (220)
T Consensus       114 ---------~~~r~~~~~~~~~p~~~~~kv~iidevhmls-------~~afnallktleepp~~~~fi~att~~~k~p~t  177 (600)
T PRK09111        114 ---------DDIREIIESVRYRPVSARYKVYIIDEVHMLS-------TAAFNALLKTLEEPPPHVKFIFATTEIRKVPVT  177 (600)
T ss_pred             ---------HHHHHHHHHHCCCCCCCCEEEEEEECCCCCC-------HHHHHHHHHHHHCCCCCEEEEEECCCHHHCCHH
T ss_conf             ---------8999999860538877754699960011057-------999999998762598654999962853437589


Q ss_pred             HHHHHH
Q ss_conf             999999
Q gi|254780129|r  172 LWGQIW  177 (220)
Q Consensus       172 l~~ll~  177 (220)
T Consensus       178 i~src~  183 (600)
T PRK09111        178 VLSRCQ  183 (600)
T ss_pred             HHHHHH
T ss_conf             985441