HHsearch alignment for GI: 254780129 and conserved domain: PRK09183

>PRK09183 transposase/IS protein; Provisional.
Probab=92.15  E-value=0.25  Score=26.79  Aligned_cols=47  Identities=13%  Similarity=0.078  Sum_probs=33.2

Q ss_pred             HHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCC
Q ss_conf             999996798199968999889999999999974089948997233101
Q gi|254780129|r   13 VNWLLSHDRCALWASMGSGKTVSVLFALSTIKILDPRPVLIIAPLRVA   60 (220)
Q Consensus        13 ~~~~~~~~~~~l~~~~G~GKT~~ai~~~~~~~~~~~~~~LIi~P~s~~   60 (220)
T Consensus        95 ~~fi~~~~Nvil~G~~GtGKThLA~Alg~~A~~-~G~~v~f~~~~~L~  141 (258)
T PRK09183         95 LSFIERNENIVLLGPSGVGKTHLAIALGYEAVR-AGIKVRFTTAADLL  141 (258)
T ss_pred             CCHHHCCCCEEEECCCCCCHHHHHHHHHHHHHH-CCCEEEEEEHHHHH
T ss_conf             816655886799899998689999999999998-79939997899999