HHsearch alignment for GI: 254780129 and conserved domain: PRK09401
>PRK09401 reverse gyrase; Reviewed.
Probab=98.81 E-value=6.6e-08 Score=64.56 Aligned_cols=129 Identities=16% Similarity=0.103 Sum_probs=89.3
Q ss_pred CCCCHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHCCCC--CCEEE
Q ss_conf 7134899999999996798199968999889999999999974089948997233101378899998515534--60699
Q gi|254780129|r 3 LVLKPHQIVMVNWLLSHDRCALWASMGSGKTVSVLFALSTIKILDPRPVLIIAPLRVAQYVWKDEVERWSAFS--DMTVS 80 (220)
Q Consensus 3 ~~Lrp~Q~~a~~~~~~~~~~~l~~~~G~GKT~~ai~~~~~~~~~~~~~~LIi~P~s~~~~~W~~e~~~~~~~~--~~~~~ 80 (220)
T Consensus 77 ~~~w~~Qr~WakR~~~g~SFaiiAPTG~GKTtfgl~~sly~a~-kgkks~~i~PT~~Lv~Q~~~kl~~~~~~~~~~~~~~ 155 (1176)
T PRK09401 77 SEPWSLQRTWAKRLLLGESFAIIAPTGVGKTTFGLVMALYLAK-KGKKSYIIFPTRLLVEQVVEKLRKLAEKVGVKVRLL 155 (1176)
T ss_pred CCCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHH-CCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCEEE
T ss_conf 9984889999999866897489888998888999999999986-598399996888999999999999999709984089
Q ss_pred EEECCCC--CCC----CCCCCCCCEEEECHHHHHCCCCCCCCCCCCCCCCCCHHHCC-CC
Q ss_conf 8611210--112----23456766278656673100000000247200002512201-36
Q gi|254780129|r 81 SLIGSER--QRI----KALNTPAHLYIINFENIPWLVKMKLDHWDFATIVVDESTKL-KS 133 (220)
Q Consensus 81 ~~~~~~~--~~~----~~~~~~~~~~i~~~~~l~~~~~~~~~~~~~~~iIiDEaH~~-kn 133 (220)
T Consensus 156 ~y~~~~~~~~kee~~~~~~~gdfdIlitT~~fl~kn~~~-l~~~~f~fifvDDVDs~LKs 214 (1176)
T PRK09401 156 YYHSSLKKKEKEEFLERLEEGDFDILVTTSQFLSKNFDE-LPKDRFDFVFVDDVDAVLKS 214 (1176)
T ss_pred EEECCCCHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHH-CCCCCCCEEEEECHHHHHHH
T ss_conf 985677666789999886559986899856767654876-03568888999341877752