HHsearch alignment for GI: 254780129 and conserved domain: PRK10536
>PRK10536 hypothetical protein; Provisional.
Probab=98.01 E-value=2.1e-05 Score=50.14 Aligned_cols=153 Identities=15% Similarity=0.122 Sum_probs=73.0
Q ss_pred CHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHH-HHHHHHHCCCCCEEEEECCCCCHH--------------HHHHHHHH
Q ss_conf 489999999999679819996899988999999-999997408994899723310137--------------88999985
Q gi|254780129|r 6 KPHQIVMVNWLLSHDRCALWASMGSGKTVSVLF-ALSTIKILDPRPVLIIAPLRVAQY--------------VWKDEVER 70 (220)
Q Consensus 6 rp~Q~~a~~~~~~~~~~~l~~~~G~GKT~~ai~-~~~~~~~~~~~~~LIi~P~s~~~~--------------~W~~e~~~ 70 (220)
T Consensus 61 t~~Q~~yi~~i~~~~ivf~~GpAGTGKT~lA~a~Al~~l~~~~~~kIIltRP~V~~ge~lGfLPGdl~EK~~Pyl~Pi~D 140 (262)
T PRK10536 61 NEAQLHYLKAIESKQLIFATGEAGCGKTWISAAKAAEALIHKDVDRIIVTRPVLQADEDLGFLPGDIAEKFAPYFRPVYD 140 (262)
T ss_pred CHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 86499999998619839998999875899999999999985888689996678756766676989879988788878999
Q ss_pred HCCCCCCEEEEEECCCCCCCCCCC-CCCCEEEECHHHHHCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHH
Q ss_conf 155346069986112101122345-6766278656673100000000247200002512201365433203699999998
Q gi|254780129|r 71 WSAFSDMTVSSLIGSERQRIKALN-TPAHLYIINFENIPWLVKMKLDHWDFATIVVDESTKLKSFRTHQGTKQTRALGKV 149 (220)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~l~~~~~~~~~~~~~~~iIiDEaH~~kn~~~~~~~k~~k~l~~~ 149 (220)
T Consensus 141 -------~L~~~lg~~~~-~~~~~~e~G~Iei~PlafmRGr------Tf~na~IIvDEaQN~-------T~~qmk~iLTR 199 (262)
T PRK10536 141 -------VLVRRLGASFM-QYCLRPEIGKVEIAPFAYMRGR------TFENAVVILDEAQNV-------TAAQMKMFLTR 199 (262)
T ss_pred -------HHHHHHCHHHH-HHHHHHHCCCEEEEEHHHHCCC------CCCCEEEEEEHHHCC-------CHHHHHHHHHH
T ss_conf -------99999685999-9998730594899875874477------514428998412128-------99999889854
Q ss_pred HHCCCCEEEEECCCCCCCCH-----HHHHHHHHHHCC
Q ss_conf 51379879983165324888-----999999998288
Q gi|254780129|r 150 AFSKVKRFIELTGTPSPNGL-----IDLWGQIWFLDK 181 (220)
Q Consensus 150 ~~~~~~~~l~LTgTPi~n~~-----~el~~ll~~l~p 181 (220)
T Consensus 200 iG~~S--KiVi~GD~~Q~Dl~~~~~SGL~~~~~~l~~ 234 (262)
T PRK10536 200 LGENV--TVIVNGDITQCDLPRGVKSGLSDALERFEE 234 (262)
T ss_pred CCCCC--EEEEECCCCCCCCCCCCCCCHHHHHHHHCC
T ss_conf 25996--899968820226999998739999999569