HHsearch alignment for GI: 254780129 and conserved domain: PRK13342
>PRK13342 recombination factor protein RarA; Reviewed.
Probab=95.30 E-value=0.2 Score=27.36 Aligned_cols=27 Identities=22% Similarity=0.460 Sum_probs=17.8
Q ss_pred HHHHHHC---CCCEEEECCCCCHHHHHHHH
Q ss_conf 9999967---98199968999889999999
Q gi|254780129|r 13 VNWLLSH---DRCALWASMGSGKTVSVLFA 39 (220)
Q Consensus 13 ~~~~~~~---~~~~l~~~~G~GKT~~ai~~ 39 (220)
T Consensus 28 L~~~i~~~~~~s~Il~GPPG~GKTTlA~ii 57 (417)
T PRK13342 28 LRRMIEAGRLSSMILWGPPGTGKTTLARII 57 (417)
T ss_pred HHHHHHCCCCCEEEEECCCCCCHHHHHHHH
T ss_conf 999997699975998896999899999999