HHsearch alignment for GI: 254780129 and conserved domain: TIGR00631

>TIGR00631 uvrb excinuclease ABC, B subunit; InterPro: IPR004807 All proteins in this family for which functions are known are DNA helicases that function in the nucleotide excision repair and are endonucleases that make the 3' incision next to DNA damage. They are part of a pathway requiring UvrA, UvrB, UvrC, and UvrD homologs.; GO: 0009381 excinuclease ABC activity, 0006289 nucleotide-excision repair, 0005737 cytoplasm, 0009380 excinuclease repair complex.
Probab=98.67  E-value=1e-07  Score=63.48  Aligned_cols=68  Identities=19%  Similarity=0.237  Sum_probs=52.7

Q ss_pred             HHHHHHHHHHC-----CCCEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCEEE
Q ss_conf             99999999967-----9819996899988999999999997408994899723310137889999851553460699
Q gi|254780129|r    9 QIVMVNWLLSH-----DRCALWASMGSGKTVSVLFALSTIKILDPRPVLIIAPLRVAQYVWKDEVERWSAFSDMTVS   80 (220)
Q Consensus         9 Q~~a~~~~~~~-----~~~~l~~~~G~GKT~~ai~~~~~~~~~~~~~~LIi~P~s~~~~~W~~e~~~~~~~~~~~~~   80 (220)
T Consensus        14 QP~AI~~L~~~l~~G~~~QtLLGvTGsGKTFT~AnVIa~~----~rPTLV~aHNKTLAAQLY~EfKefFPeNAVEYF   86 (667)
T TIGR00631        14 QPKAIAKLVEGLEAGEKEQTLLGVTGSGKTFTMANVIAQV----QRPTLVLAHNKTLAAQLYNEFKEFFPENAVEYF   86 (667)
T ss_pred             HHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHH----CCCEEEECCCHHHHHHHHHHHHHHCCCCCEEEE
T ss_conf             1899999999985688714785321486278898999984----798499857776799999999863867724525